View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9913A_low_297 (Length: 243)
Name: NF9913A_low_297
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9913A_low_297 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 31114743 - 31114959
Alignment:
| Q |
8 |
tttggtgttacaagcttacaacaatttcactcatcatcttcatcatcatcctcatcctcctacaaggttnnnnnnnnnnnnnnnnctaagttaaaaccat |
107 |
Q |
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| T |
31114743 |
tttggtgttacaagcttacaacaatttcactcatcatcttcatcatcatcctcatcctcctacaaggttaaaaaataaaaataaactaagttaaaaccat |
31114842 |
T |
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| Q |
108 |
tcaattatttaagtaccatcacacatataagacaaaaatcaaattttagatgaatctatctatacctcatcttcatcctcatcattgacttcagattttg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31114843 |
tcaattatttaagtaccatcacacatataagacaaaaatcaaattttagatgaatctatctatacctcatcttcatcctcatcattgacttcagattttg |
31114942 |
T |
|
| Q |
208 |
acttgtcagaaccatct |
224 |
Q |
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||||||||||||||||| |
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| T |
31114943 |
acttgtcagaaccatct |
31114959 |
T |
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