View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_308 (Length: 241)

Name: NF9913A_low_308
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_308
NF9913A_low_308
[»] chr3 (11 HSPs)
chr3 (8-241)||(10968311-10968544)
chr3 (8-240)||(52918483-52918715)
chr3 (10-241)||(33230-33461)
chr3 (8-235)||(50410625-50410852)
chr3 (8-237)||(13530496-13530725)
chr3 (8-239)||(11369096-11369326)
chr3 (8-240)||(10111057-10111288)
chr3 (8-240)||(10000864-10001095)
chr3 (8-191)||(10238011-10238194)
chr3 (8-240)||(10039087-10039308)
chr3 (186-240)||(10244920-10244973)
[»] chr8 (5 HSPs)
chr8 (10-241)||(25218094-25218325)
chr8 (10-237)||(30325934-30326161)
chr8 (10-240)||(7822297-7822527)
chr8 (10-241)||(25208576-25208807)
chr8 (12-240)||(21113275-21113502)
[»] chr4 (6 HSPs)
chr4 (10-241)||(35856366-35856597)
chr4 (10-237)||(13337694-13337921)
chr4 (12-240)||(55558654-55558881)
chr4 (10-240)||(49710631-49710861)
chr4 (20-241)||(49786381-49786602)
chr4 (57-237)||(13344441-13344621)
[»] chr5 (13 HSPs)
chr5 (10-241)||(8428114-8428345)
chr5 (10-241)||(27881543-27881774)
chr5 (10-241)||(37373395-37373626)
chr5 (8-239)||(3690434-3690665)
chr5 (8-239)||(3876122-3876353)
chr5 (8-237)||(25542327-25542555)
chr5 (8-230)||(14192352-14192574)
chr5 (12-236)||(10025439-10025662)
chr5 (8-240)||(17871169-17871400)
chr5 (12-240)||(24629484-24629711)
chr5 (12-240)||(30346160-30346387)
chr5 (8-240)||(37261760-37261992)
chr5 (8-230)||(39883640-39883854)
[»] scaffold0003 (2 HSPs)
scaffold0003 (8-238)||(183268-183498)
scaffold0003 (8-116)||(165990-166098)
[»] chr7 (8 HSPs)
chr7 (7-240)||(22844259-22844492)
chr7 (10-240)||(9000675-9000905)
chr7 (10-241)||(12780677-12780908)
chr7 (22-240)||(42232471-42232688)
chr7 (20-240)||(12785532-12785752)
chr7 (10-241)||(7037179-7037410)
chr7 (8-240)||(21069593-21069824)
chr7 (8-151)||(5828174-5828317)
[»] chr2 (11 HSPs)
chr2 (20-239)||(41919728-41919947)
chr2 (8-230)||(27192946-27193168)
chr2 (8-230)||(27842760-27842982)
chr2 (8-240)||(27509831-27510063)
chr2 (20-240)||(28665726-28665946)
chr2 (20-240)||(37824560-37824780)
chr2 (10-240)||(24246284-24246512)
chr2 (10-240)||(21395829-21396059)
chr2 (8-230)||(35610110-35610331)
chr2 (12-240)||(24268601-24268828)
chr2 (100-240)||(17683443-17683583)
[»] scaffold0134 (1 HSPs)
scaffold0134 (10-240)||(4791-5020)
[»] scaffold0090 (1 HSPs)
scaffold0090 (20-241)||(48489-48710)
[»] scaffold0356 (1 HSPs)
scaffold0356 (8-240)||(17407-17639)
[»] scaffold0118 (1 HSPs)
scaffold0118 (12-240)||(28250-28477)
[»] scaffold0107 (1 HSPs)
scaffold0107 (10-241)||(42434-42665)
[»] chr1 (8 HSPs)
chr1 (10-241)||(6310523-6310754)
chr1 (8-240)||(16042482-16042712)
chr1 (12-240)||(52501038-52501265)
chr1 (8-241)||(36207672-36207905)
chr1 (10-241)||(37389681-37389912)
chr1 (8-196)||(2452690-2452879)
chr1 (8-238)||(2329623-2329853)
chr1 (8-185)||(48774920-48775097)
[»] scaffold0002 (2 HSPs)
scaffold0002 (8-240)||(320866-321098)
scaffold0002 (170-240)||(319246-319314)
[»] chr6 (5 HSPs)
chr6 (8-240)||(12517731-12517963)
chr6 (8-240)||(30881783-30882014)
chr6 (100-240)||(10188571-10188711)
chr6 (107-240)||(2200428-2200561)
chr6 (8-111)||(2201838-2201941)
[»] scaffold1139 (1 HSPs)
scaffold1139 (8-239)||(1474-1705)
[»] scaffold0262 (1 HSPs)
scaffold0262 (8-240)||(19462-19693)
[»] scaffold0073 (2 HSPs)
scaffold0073 (8-230)||(32389-32611)
scaffold0073 (10-241)||(210-441)
[»] scaffold0017 (1 HSPs)
scaffold0017 (8-240)||(187011-187240)
[»] scaffold0225 (1 HSPs)
scaffold0225 (8-240)||(13808-14039)
[»] scaffold0550 (1 HSPs)
scaffold0550 (8-240)||(98-334)


Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 10968544 - 10968311
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | ||||||||    
T  10968544 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacctgatatcatgcattgatcggtcaactgc 10968445  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10968444 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 10968345  T
Q  208 gatgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||||| ||||||||||    
T  10968344 gatgacgcctcattaatctcaatagggactgtcg 10968311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 52918483 - 52918715
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| | ||||||||    
T  52918483 tgaaatcaccacctaaaactactgtcattccaccaaaaggtctaaacttgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgc 52918582  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  52918583 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctaccctaggattatccttttccatcgtaagc 52918682  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||||| |||||||||||||||  ||||||||    
T  52918683 gatgacggctcattaatctcaataaggactgtc 52918715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 33230 - 33461
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  33230 aaatcaccacctaaaactattgtcattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 33329  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33330 caaaacaccatcggtgcatcatcggagcctcatcccaaattatcaactatgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 33429  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||| ||||||||||||||||| ||||||||||    
T  33430 tgatgcctcattaatctcaatagggactgtcg 33461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 50410625 - 50410852
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  50410625 tgaaatcaccacctaaaactactgtcattccacgaaaaggtataaactcgtttaggggatcattcttggacatgatatcacacattgatcggtcaactgc 50410724  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50410725 ctcaaaacaccattggtgcatcattggagcctcatcacaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 50410824  T
Q  208 gatgacgcctcattaatctcaatcggga 235  Q
    ||||| ||||| ||||||||||| ||||    
T  50410825 gatgatgcctccttaatctcaataggga 50410852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 13530496 - 13530725
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | |||||||     
T  13530496 tgaaatcaccagctaaaactactgtcattccatcgaaaggtctaaactcgtttaggggatcattcttggacatgatatgacgcattgatcggtcaactgt 13530595  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13530596 ctcaaaacaccattggtgtatcatcggagccttatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttctatcgtaagc 13530695  T
Q  208 gatgacgcctcattaatctcaatcgggact 237  Q
    ||||| ||||||||||||||||| ||||||    
T  13530696 gatgatgcctcattaatctcaatagggact 13530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 11369096 - 11369326
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  11369096 tgaaatcaccacttaaaactactgtcattccaccaaaaggtctaaactcgtataggggatcattcttggatatgatatcatgcattgattggtcaactgc 11369195  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| |||||    
T  11369196 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgaagcatgcaccaggtctg-cctaggactatccttttccatcttaagc 11369294  T
Q  208 gatgacgcctcattaatctcaatcgggactgt 239  Q
    ||||| ||||||||||||||||  ||||||||    
T  11369295 gatgatgcctcattaatctcaacagggactgt 11369326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 10111057 - 10111288
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||| |||||||||| |||| ||| |||| |||||||||| ||||||||||||||||||| ||| ||||||| | ||||||||    
T  10111057 tgaaatcaccacctaaaactattgtcattccatcaaatggtttaaactcgtttagggaatcattcttggacatgataccacacattgatcggtcaactgc 10111156  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  10111157 ctcaaaacaccatcagtgcatcattagagcctcatcccaaattatcaactttgcagcacgcaccaagtctgccctaggactatccttttccatcgtaaga 10111256  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| |||||| |||||||||| |||||||||    
T  10111257 gatgatgcctca-taatctcaatagggactgtc 10111288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 10000864 - 10001095
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||| ||| ||||||||| |||||||||| |||| ||| |||| |||||||||| ||||||||||||||||||| ||| ||||||| | ||||||||    
T  10000864 tgaaatccccacctaaaactattgtcattccatcaaatggtttaaactcgtttagggaatcattcttggacatgataccacacattgatcggtcaactgc 10000963  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  10000964 ctcaaaacaccatcagtgcatcattagagcctcatcccaaattatcaactttgcagcacgcaccaagtctgccctaggactatccttttccatcgtaaga 10001063  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    |||||  ||||| |||||||||  |||||||||    
T  10001064 gatgattcctca-taatctcaacagggactgtc 10001095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 191
Target Start/End: Original strand, 10238011 - 10238194
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||| |||||||||| |||| ||| |||| |||||||||| ||||||| ||||||||||| ||| ||||||| | ||||||||    
T  10238011 tgaaatcaccacctaaaactattgtcattccatcaaatggtttaaactcgtttagggaatcattcctggacatgataccacacattgatcggtcaactgc 10238110  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatc 191  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10238111 ctcaaaacaccatcagtgcatcattagagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatc 10238194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 10039087 - 10039308
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||||||||||  |||||||| |||||||||||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||   |||||| |    
T  10039087 tgaaatcaccacataaaactattgtcattccaccaaaaggtctaaactcgtttaagggatcattcctagacatgatatcacgcattgatcagtcaacttc 10039186  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||| |||||           ||||||| |||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||| |||| |||||||    
T  10039187 ctcaaaagaccat-----------tggagccccatcccaaattatcaattttacagtacgcaccaggtctgccctatgactatccttctccagcgtaagc 10039275  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| ||||||||||||||||| |||||||||    
T  10039276 gatgatgcctcattaatctcaatagggactgtc 10039308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 10244920 - 10244973
Alignment:
Q  186 actatccttttccatcgtaagcgatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||||||||| ||||||||| ||||| |||||| |||||||||| |||||||||    
T  10244920 actatccttttacatcgtaagagatgatgcctca-taatctcaatagggactgtc 10244973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 25218325 - 25218094
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  25218325 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 25218226  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25218225 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 25218126  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  25218125 tgacgcctcattaatctcaatagggactgtcg 25218094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 30325934 - 30326161
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||| | ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  30325934 aaatcacaacctaaaactactgtcattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 30326033  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  30326034 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcatgcaccaggtctgccctaggactatcattttccatcgtaagcga 30326133  T
Q  210 tgacgcctcattaatctcaatcgggact 237  Q
    ||||||||||||||||||||| ||||||    
T  30326134 tgacgcctcattaatctcaatagggact 30326161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 7822297 - 7822527
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||    ||||||||||||||| ||||||||||||||| ||| |||| | ||||||||||    
T  7822297 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagtgtgtttaggggatcatttttggacatgatatcatgcaatgatcggtcaactgcct 7822396  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  7822397 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatcctctttcatcgcaagcga 7822496  T
Q  210 tgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||||||||||||||||||| |||||||||    
T  7822497 tgacgcctcattaatctcaatagggactgtc 7822527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 25208807 - 25208576
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||     ||||||||||||||||||||||||||||||| || |||| | ||||||||||    
T  25208807 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagtgtctttaggggatcattcttggacatgatatcacacaatgatcggtcaactgcct 25208708  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  25208707 caaaacaccatcggtgcatcattggagtctcatcccaaattatcaactttggagcacgcatcaggtctgccctaggactttccttttccatcgtaagcga 25208608  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  25208607 tgacgcctcattaatctcaatagggactgtcg 25208576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 21113502 - 21113275
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| ||||||||| ||||||||||||||| ||| |||| | |||||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  21113502 atcaccacctaaaactattgtcattccaccaaatggtttaaacttgtttaggggatcattcttggacatgatatcacgcattgatcggtcaactgccgca 21113403  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21113402 aaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgtcctaggactatccttttccatcgtaagcgatg 21113303  T
Q  212 acgcctcattaatctcaatcgggactgtc 240  Q
    | |||||| |||||||||| |||||||||    
T  21113302 atgcctca-taatctcaatagggactgtc 21113275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 35856366 - 35856597
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  35856366 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 35856465  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35856466 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 35856565  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  35856566 tgacgcctcattaatctcaatagggactgtcg 35856597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 13337694 - 13337921
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  13337694 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagtgtgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 13337793  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13337794 caaaccaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 13337893  T
Q  210 tgacgcctcattaatctcaatcgggact 237  Q
    ||||||||||||||||||||| ||||||    
T  13337894 tgacgcctcattaatctcaatagggact 13337921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 55558881 - 55558654
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| ||||||||| ||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  55558881 atcaccacctaaaactattgtcattccaccaaatggtttaaactcgtttaggggatcatttttggacatgatatcacgcattgatcggtcaactgcctca 55558782  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55558781 aaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 55558682  T
Q  212 acgcctcattaatctcaatcgggactgtc 240  Q
    | |||||| |||||||||| |||||||||    
T  55558681 atgcctca-taatctcaatagggactgtc 55558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 49710631 - 49710861
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||| |||||||||||| |||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  49710631 aaatcaccacctaaaactattgtcattccaccgaaaggtttaagcgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 49710730  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  49710731 caaaacaccatcgatgcatcattggagcctcatcccaaattatcaactttgcagcacgcacaaggtctgccctaggactatccttttgcatcttaagcga 49710830  T
Q  210 tgacgcctcattaatctcaatcgggactgtc 240  Q
    ||| ||||| ||||||||||| |||||||||    
T  49710831 tgatgcctcgttaatctcaatagggactgtc 49710861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 49786602 - 49786381
Alignment:
Q  20 ctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacacca 119  Q
    ||||||||| || ||||||||||||| || |||    ||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  49786602 ctaaaactattgccattccaccaaaaagtttaagtgtgtttaggggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacacca 49786503  T
Q  120 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctca 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49786502 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctca 49786403  T
Q  220 ttaatctcaatcgggactgtcg 241  Q
    ||||||||||| ||||||||||    
T  49786402 ttaatctcaatagggactgtcg 49786381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 13344441 - 13344621
Alignment:
Q  57 gtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaac 156  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13344441 gtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcctcaaaccaccatcggtgcatcattggagcctcatcccaaattatcaac 13344540  T
Q  157 tttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatcgggact 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13344541 tttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatagggact 13344621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 8428345 - 8428114
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| |||||||||||| |||||||||||||||| |||   |||||||||||||||||||||||||||||||| ||| |||| | ||||||||||    
T  8428345 aaatcaccacctaaaactactgccattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcaagcaatgatcggtcaactgcct 8428246  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8428245 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 8428146  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  8428145 tgacgcctcattaatctcaatagggactgtcg 8428114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 27881543 - 27881774
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  27881543 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagcgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 27881642  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27881643 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcatcaggtttgccctaggactatccttttccatcgtaagcga 27881742  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  27881743 tgacgcctcattaatctcaatagggactgtcg 27881774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 37373395 - 37373626
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  37373395 aaatcaccacctaaaactactgtgattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 37373494  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37373495 caaaacaccatcggtgcatcattggagtctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 37373594  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  37373595 tgacgcctcattaatctcaatagggactgtcg 37373626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 3690434 - 3690665
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  3690434 tgaaatcaccacctaaaactactatcattccaccaaaaggtctaaactcgtttaggggatcattcttggatatgatatcatgcattgattggtcaactgc 3690533  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  3690534 ctcaaaacaccatcggttcatcattggagcctcatcccaaattatcaactttgcagcaggcaccaggtctgccctaggactatccttttccatcgtaagt 3690633  T
Q  208 gatgacgcctcattaatctcaatcgggactgt 239  Q
    ||||| ||||||||||||||||| ||||||||    
T  3690634 gatgatgcctcattaatctcaatagggactgt 3690665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 3876353 - 3876122
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  3876353 tgaaatcaccacctaaaactactatcattccaccaaaaggtctaaactcgtttaggggatcattcttggatatgatatcatgcattgattggtcaactgc 3876254  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  3876253 ctcaaaacatcatcggttcatcattggagcctcatcccaaattatcaactttgcagcaggcaccaggtctgccctaggactatccttttccatcgtaagt 3876154  T
Q  208 gatgacgcctcattaatctcaatcgggactgt 239  Q
    ||||| ||||||||||||||||| ||||||||    
T  3876153 gatgatgcctcattaatctcaatagggactgt 3876122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 25542555 - 25542327
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| || | |||||| |    
T  25542555 tgaaatcaccacctaaaactactgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacgcattaatcggtcaacttc 25542456  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25542455 ctcaaaacaccatcagtgcatcattggagcctcatcttaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 25542356  T
Q  208 gatgacgcctcattaatctcaatcgggact 237  Q
    ||||| |||||| |||||||||| ||||||    
T  25542355 gatgatgcctca-taatctcaatagggact 25542327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 8 - 230
Target Start/End: Complemental strand, 14192574 - 14192352
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttagggg-atcattcttggacatgatatcacgcattgatagatcaactg 106  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| | |||| ||    
T  14192574 tgaaatcaccacctaaaacaactgtcattccaccaaaaggtctaaactcgtttagggggatcattcttggacatgatatcacgcattgatcggtcaattg 14192475  T
Q  107 cctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaag 206  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14192474 cttcaaaacaccatcggtgca-cattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaag 14192376  T
Q  207 cgatgacgcctcattaatctcaat 230  Q
     ||||| |||| ||||||||||||    
T  14192375 tgatgatgcctaattaatctcaat 14192352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 10025439 - 10025662
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  10025439 atcaccacctaaaactattgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacgcattgatcggtcaactgcctca 10025538  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  10025539 aaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgcagcacgcactaggtctgccccaggactatccttttccatcgtaagcgatg 10025638  T
Q  212 acgcctcattaatctcaatcgggac 236  Q
    | |||||| |||||||||| |||||    
T  10025639 atgcctca-taatctcaatagggac 10025662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 17871400 - 17871169
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  17871400 tgaaatcaccacctaaaacttttgtctttccaccaaaaggtctaaactcgtttaggggatcattcttggacatgatat-acgcattgatcgatcaactgc 17871302  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |  || |||||| |||| |||||||||||||||||||||||||||||    
T  17871301 ctcaaaacaccatcggtgcatcattggagcctcattccatattatcaacttttctacatgcaccatgtcttccctaggactatccttttccatcgtaagc 17871202  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| ||||||||||||||||| |||||||||    
T  17871201 gatgatgcctcattaatctcaatagggactgtc 17871169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 24629711 - 24629484
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  24629711 atcaccacctaaaactattgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacgcattgatcggccaactgcctca 24629612  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  24629611 aaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgcagcacgcatcaggtcttccctaggactatccttttccatcgtaagcgatg 24629512  T
Q  212 acgcctcattaatctcaatcgggactgtc 240  Q
    | |||||| |||||| ||| |||||||||    
T  24629511 atgcctca-taatcttaatagggactgtc 24629484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 30346387 - 30346160
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| ||||||||| |||||||||||||||  || |||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||    
T  30346387 atcaccacctaaaactattgtcattccaccaaatagtttaaactcgtttaggggatcaatcttggacatgatatcacgcattgatcggtcaactgcctca 30346288  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  30346287 aaacaccatcagtgcatcaatggagtctcatcccaaattatcaactttgcagcacgcatcaggtctgccctaggactatccttttccatcgtaagtgatg 30346188  T
Q  212 acgcctcattaatctcaatcgggactgtc 240  Q
    | |||||| |||||||||| |||||||||    
T  30346187 atgcctca-taatctcaatagggactgtc 30346160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 37261760 - 37261992
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||||||||||  |||||||| |||||||||||| ||||||||||| |||||||  ||||||||| | ||||||||||| |||||||||   |||||| |    
T  37261760 tgaaatcaccacataaaactattgtcattccaccgaaaggtctaaactcgtttaaaggatcattcctagacatgatatcgcgcattgatcagtcaacttc 37261859  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  37261860 ctcaaaacaccatcaatgcatcattggagcctcatcccaaattatcaactttacagcacgcaccaggtctgtcctaggactatccttttccatcgtaagc 37261959  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
     |||| ||||||||||||||||| |||||||||    
T  37261960 aatgatgcctcattaatctcaatagggactgtc 37261992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 39883640 - 39883854
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||||||||||  |||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||        || |||| | ||| ||||    
T  39883640 tgaaatcaccacgtaaaactactgtcattccaccaaaaggtttaagcgcgtttaggggatcattcttggacatg--------caatgatcggtcagctgc 39883731  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39883732 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcagctttgcagcacgcaccaggtctgccttaggactatccttttccatcgtaagc 39883831  T
Q  208 gatgacgcctcattaatctcaat 230  Q
    ||||| |||||||||||||||||    
T  39883832 gatgatgcctcattaatctcaat 39883854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 183; Significance: 4e-99; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 183268 - 183498
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  183268 tgaaatcaccacctaaaactactatcattccaccaaaaggtctaaactcgtttaggggatcattcttggatatgatatcatgcattgattggtcaactgc 183367  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  183368 ctcaaaacaccatcggtacatcattggagcctaatcccaaattattaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 183467  T
Q  208 gatgacgcctcattaatctcaatcgggactg 238  Q
    ||||| ||||||||||||||||| |||||||    
T  183468 gatgatgcctcattaatctcaatagggactg 183498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 165990 - 166098
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| |||||||| | ||||||||    
T  165990 tgaaatcaccacctaaaactactatcattccaccaaaaggtctaaactcgtttaggtgatcattcttggatatgatatcatgcattgattggtcaactgc 166089  T
Q  108 ctcaaaaca 116  Q
    |||||||||    
T  166090 ctcaaaaca 166098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 22844259 - 22844492
Alignment:
Q  7 atgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactg 106  Q
    |||||||||||| ||||||||  |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22844259 atgaaatcaccacctaaaacttttgtctttccaccaaaaggtctaaactcgtttaggggatcattcttggacatgatatcacgcattgatcgatcaactg 22844358  T
Q  107 cctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaag 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||||||||||||||||||| ||||||||    
T  22844359 cctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgctacatgcaccaggtcttccctaggactatccttttcaatcgtaag 22844458  T
Q  207 cgatgacgcctcattaatctcaatcgggactgtc 240  Q
    |||||| ||||||||||||||||| |||||||||    
T  22844459 cgatgatgcctcattaatctcaatagggactgtc 22844492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 9000905 - 9000675
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||| | ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  9000905 aaatcacaacctaaaactactgtcattccaccaaaaggtttaagcgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 9000806  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  9000805 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcatcaggtctgccctaggactatccttttccatcttaagcga 9000706  T
Q  210 tgacgcctcattaatctcaatcgggactgtc 240  Q
    ||| ||||||||||||||||| |||||||||    
T  9000705 tgatgcctcattaatctcaatagggactgtc 9000675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 12780908 - 12780677
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||  || |||| |  |||||||||    
T  12780908 aaatcaccacctaaaactattgtcattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcaaacaatgatcggacaactgcct 12780809  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12780808 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgtagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 12780709  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    |||| |||||||||||||||| ||||||||||    
T  12780708 tgacacctcattaatctcaatagggactgtcg 12780677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 42232471 - 42232688
Alignment:
Q  22 aaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacaccatc 121  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  42232471 aaaactattgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacgcattgatcggtcaactgcctcaaaacaccatc 42232570  T
Q  122 ggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcatt 221  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  42232571 agtgcatcaatggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgatgcctca-t 42232669  T
Q  222 aatctcaatcgggactgtc 240  Q
    ||||||||| |||||||||    
T  42232670 aatctcaatagggactgtc 42232688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 12785752 - 12785532
Alignment:
Q  20 ctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacacca 119  Q
    |||||||||||| ||||||||||||| || |||   |||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  12785752 ctaaaactactgccattccaccaaaaagtttaagtgcgtttaggggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacacca 12785653  T
Q  120 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctca 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12785652 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctca 12785553  T
Q  220 ttaatctcaatcgggactgtc 240  Q
    ||||||||||| |||||||||    
T  12785552 ttaatctcaatagggactgtc 12785532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 7037179 - 7037410
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||   |||||| ||||||||||||| ||||||||||||| | |||| | |||||| |||    
T  7037179 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagtgcgtttaagggatcattcttgaacatgatatcacgtaatgatcggtcaactacct 7037278  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  7037279 caaaacaccattggtgcatcattggagcctcaccccaaattatcaactttgcagcatgcattaggtctgccctaggactatccttttccatcgtaagcga 7037378  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  7037379 tgacgcctcattaatctcaatagggactgtcg 7037410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 21069824 - 21069593
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||  ||| || |||    
T  21069824 tgaaatcaccacctaaaactactgtgattccaccaaatggtctaaactcgtttaggggatcattcttggacatgatatcacgcattgaccgatgaaatgc 21069725  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||  | ||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21069724 ctcaaaacaccatcaatacatcattggagcctcgttcgaaattatcaagtttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 21069625  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| |||||| |||||||||| |||||||||    
T  21069624 gatgatgcctca-taatctcaatagggactgtc 21069593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 5828317 - 5828174
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||| | ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  5828317 tgaaatcaccacctaaaactaatatcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacacattgatcgatcaactgc 5828218  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaatta 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  5828217 ctcaaaacaccatcagtgcatcattggagcctcatcccaaatta 5828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 41919947 - 41919728
Alignment:
Q  20 ctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacacca 119  Q
    |||||||||||| |||||||||||||||| |||   |||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  41919947 ctaaaactactgccattccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacacca 41919848  T
Q  120 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctca 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41919847 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctca 41919748  T
Q  220 ttaatctcaatcgggactgt 239  Q
    ||||||||||| ||||||||    
T  41919747 ttaatctcaatagggactgt 41919728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 27192946 - 27193168
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||||||||    
T  27192946 tgaaatcaccacctaaaactattgtcattccaccaaaaggtctaaactcgtttaggggatcattcttgtacatgatataacgcattgatcggtcaactgc 27193045  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  27193046 ctcaaagcaccatcggtgcatcattggagcctcatcccaaattatcaattttgcagcacgcaccaggtcagccctaggactatccttttccatcataagc 27193145  T
Q  208 gatgacgcctcattaatctcaat 230  Q
    ||||| |||||||||||||||||    
T  27193146 gatgatgcctcattaatctcaat 27193168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 27842760 - 27842982
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||||||||    
T  27842760 tgaaatcaccacctaaaactattgtcattccaccaaaaggtctaaactcgtttaggggatcattcttgtacatgatataacgcattgatcggtcaactgc 27842859  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  27842860 ctcaaagcaccatcggtgcatcattggagcctcatcccaaattatcaattttgcagcacgcaccaggtcagccctaggactatccttttccatcataagc 27842959  T
Q  208 gatgacgcctcattaatctcaat 230  Q
    ||||| |||||||||||||||||    
T  27842960 gatgatgcctcattaatctcaat 27842982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 27509831 - 27510063
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  27509831 tgaaatcaccacctaaaactactgtcattccaccaaaatgtctaaactcatttaggggatcattcttggacatgatatcacgcattgatcggtcaactgc 27509930  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||||||| || ||||||| ||||||||||    
T  27509931 ctcaaaacaccatcggtgcatcattgaagcctcatcctaaattatcaactttgcagcatgcaccagatctgccctaggtctgtccttttgcatcgtaagc 27510030  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
     |||| ||||||||||||||||| |||||||||    
T  27510031 aatgatgcctcattaatctcaatagggactgtc 27510063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 28665946 - 28665726
Alignment:
Q  20 ctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacacca 119  Q
    |||||||||||| ||||||||||||| || |||   |||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  28665946 ctaaaactactgccattccaccaaaaagtttaagtgcgtttaggggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacacca 28665847  T
Q  120 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctca 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28665846 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctca 28665747  T
Q  220 ttaatctcaatcgggactgtc 240  Q
    ||||||||||| |||||||||    
T  28665746 ttaatctcaatagggactgtc 28665726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 37824780 - 37824560
Alignment:
Q  20 ctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacacca 119  Q
    |||||||||||| ||||||||||||| || |||   |||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  37824780 ctaaaactactgccattccaccaaaaagtttaagtgcgtttaggggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacacca 37824681  T
Q  120 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctca 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37824680 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacacaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctca 37824581  T
Q  220 ttaatctcaatcgggactgtc 240  Q
    ||||||||||| |||||||||    
T  37824580 ttaatctcaatagggactgtc 37824560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 24246284 - 24246512
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||| | |||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  24246284 aaatcaccacctaaaactactatgattccaccaaaaggtctaaactcatttaggggatcattcttggacatgatatcacgtattgatcggtcaactgcct 24246383  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24246384 caaaataccatcagtgcatcattggagcctcat--caaattatcaactttgcagcacgcaccaagtctgccctaggactatccttttccatcgtaagcga 24246481  T
Q  210 tgacgcctcattaatctcaatcgggactgtc 240  Q
    ||| ||||||||||||||||| |||||||||    
T  24246482 tgatgcctcattaatctcaatagggactgtc 24246512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 21395829 - 21396059
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| |||||||||| |||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||| ||||    
T  21395829 aaatcaccacctaaaactacggtcattccaccaaaaggtttaagcgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaacagcct 21395928  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| |||||||    
T  21395929 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaagtctgccctaggactatcctttagcatcttaagcga 21396028  T
Q  210 tgacgcctcattaatctcaatcgggactgtc 240  Q
    ||| ||||||||||||||||  |||||||||    
T  21396029 tgatgcctcattaatctcaacagggactgtc 21396059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 35610110 - 35610331
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||| |||    
T  35610110 tgaaatcaccacctaaaacaactgtcattctaccaaaaggtctaaactcgtttaggggatcattcttggacatgatatcacgtattgatcggtcaattgc 35610209  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  35610210 ttcaaaacaccatcggtgca-cattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccttaggactatccttttccatcgtaagt 35610308  T
Q  208 gatgacgcctcattaatctcaat 230  Q
    ||||| |||| ||||||||||||    
T  35610309 gatgatgcctaattaatctcaat 35610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 24268828 - 24268601
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| ||||||||| ||||||||||||||| ||| |||| | |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24268828 atcaccacctaaaactattgtcattccaccaaatggtttaaacttgtttaggggatcattcttggacatgatatcacgcattgatcggtcaactgcctca 24268729  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  24268728 aaacaccatcagtgcatcagtggagcctcatcccaaattatcaactttgcagcatgcaccaggtctgtcctaggactatcattttccatcgtaagcgatg 24268629  T
Q  212 acgcctcattaatctcaatcgggactgtc 240  Q
    | ||||||  ||||||||| |||||||||    
T  24268628 atgcctca-aaatctcaatagggactgtc 24268601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 17683583 - 17683443
Alignment:
Q  100 tcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttcca 199  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  17683583 tcaactgcctcaaaacaccattggtgcatcattagagcctcattccaaattatcaactttgcagcacgcaccaggtctgccctacgactatcctttttca 17683484  T
Q  200 tcgtaagcgatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||||||||||| |||||||||||||| || |||||||||    
T  17683483 tcgtaagcgatgatgcctcattaatctcgatagggactgtc 17683443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 5020 - 4791
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  5020 aaatcaccatctaaaactattgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcatgcattgatcggtcaactgcct 4921  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4920 caaaacaccatcagtgcatcattggatcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttctatcgtaagcga 4821  T
Q  210 tgacgcctcattaatctcaatcgggactgtc 240  Q
    ||| |||||| |||||||||| |||||||||    
T  4820 tgatgcctca-taatctcaatagggactgtc 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 48710 - 48489
Alignment:
Q  20 ctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctcaaaacacca 119  Q
    |||||||||||| ||||||||||||| || |||   |||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  48710 ctaaaactactgccattccaccaaaaagtttaagtgcgtttaggggatcattcttggacatgatatcaagcaatgatcggtcaactgcctcaaaacacca 48611  T
Q  120 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctca 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48610 tcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgcccaaggactatccttttccatcgtaagcgatgacgcctca 48511  T
Q  220 ttaatctcaatcgggactgtcg 241  Q
    ||||||||||| ||||||||||    
T  48510 ttaatctcaatagggactgtcg 48489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 17639 - 17407
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||||||||||  |||||||  |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17639 tgaaatcaccacataaaactcttgtcattccacggaaaggtctaaactcgtttaggggatcattcttggacatgatatcacgcattgatcgatcaactgc 17540  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  17539 ctcaaaacaccatcggtgcatcattggagcctcatcccaaactattaactttgcagcacgcaccagttcttccctaggactatccttttccattgtaagc 17440  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| ||||||||||||||||| |||||||||    
T  17439 gatgatgcctcattaatctcaatagggactgtc 17407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 28477 - 28250
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| || |||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  28477 atcaccaccttaaactattgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacgcattgatcggtcaactgcctca 28378  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28377 aaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 28278  T
Q  212 acgcctcattaatctcaatcgggactgtc 240  Q
    | |||||| |||||||||| |||||||||    
T  28277 atgcctca-taatctcaatagggactgtc 28250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 42434 - 42665
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  42434 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagcacgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 42533  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||| |||||||    
T  42534 caaaacaccatcagtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaagtatgccctaagactatccttttccatcttaagcga 42633  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||| ||||||||||||||||| ||||||||||    
T  42634 tgatgcctcattaatctcaatagggactgtcg 42665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 6310754 - 6310523
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||| |||| |||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||| | ||||||||||    
T  6310754 aaatcaccacctaaaactattgtcgttccaccaaaaggtttaagtgcgtttaggggatcattcttggacatgatatcacgcaatgatcggtcaactgcct 6310655  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  6310654 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcatgcatcaggtctgccctaggactatccttttccatcgtaagcga 6310555  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    | ||||||||||||||||||  ||||||||||    
T  6310554 taacgcctcattaatctcaaaagggactgtcg 6310523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 16042482 - 16042712
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||||||||||  |||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||| || ||||   ||| ||||    
T  16042482 tgaaatcaccacgtaaaactactgtcattccaccaaaaggtttaagcgcgtttaggggatcattcttggacatgatatcacacaatgatcagtcagctgc 16042581  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16042582 ctcaaaacaccatcggtgcatcatttgagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 16042681  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| |||||||||  |||||| |||||||||    
T  16042682 gatgatgcctcatta--ctcaatagggactgtc 16042712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 52501038 - 52501265
Alignment:
Q  12 atcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcctca 111  Q
    ||||||| ||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| |  |||||||||||    
T  52501038 atcaccacctaaaactattgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacgcattgatcggccaactgcctca 52501137  T
Q  112 aaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcgatg 211  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  52501138 aaacaccatcagtgcatcaatggagcctcatcccaaattatcaactttgcagcacgcatcaggtcttccctaggactatccttttccatcgtaagcgatg 52501237  T
Q  212 acgcctcattaatctcaatcgggactgtc 240  Q
    | |||||| |||||| ||| |||||||||    
T  52501238 atgcctca-taatcttaatagggactgtc 52501265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 36207672 - 36207905
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||||| |||||||   ||||||||    
T  36207672 tgaaatcaccacctaaaactactgtcattccaccaaaaggtctaaactcatttaagggatcattcttggacatggtatcacacattgatcagtcaactgc 36207771  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  36207772 ctcaaaacaccattagtgcatgattggagcctcatcccaaattatcaacgttgcagcacgcaccaggtctaccctaggactattcttttccatcgtaagc 36207871  T
Q  208 gatgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||| ||||| ||||||| ||| ||||||||||    
T  36207872 gatgatgcctcgttaatcttaatagggactgtcg 36207905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 10 - 241
Target Start/End: Complemental strand, 37389912 - 37389681
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||   |||||| |||||||||||||| |||||||||||||| |||| | ||||||||||    
T  37389912 aaatcaccacctaaaactattgtcattccaccaaaaggtttaagtgcgtttaagggatcattcttggccatgatatcacgcaatgattggtcaactgcct 37389813  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  37389812 caaaacaccatcattgtatcattggagtctcatcccaaattatcaactttgcagcacgcaccaggtctgccctgggactatccttttccattgtaagcga 37389713  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    |||| |||||||||||||||| ||||||||||    
T  37389712 tgacacctcattaatctcaatagggactgtcg 37389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 2452879 - 2452690
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||    
T  2452879 tgaaatcaccacctaaaactactgtcattccaccaaaagttctaaactcgtttaaggggtcattcttggacatgatatcacacattgatcgatcaactgc 2452780  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctg-ccctaggactatcctttt 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  2452779 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaacattacagcacgcaccaggtctgcccctaggactatcctttt 2452690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 2329623 - 2329853
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||| ||| ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||| ||||||| | | ||||      
T  2329623 tgaaatcaccacctaaaaccactatcattccacgaaaaggtctaaacttgtttaggggatcattcttggacatgatatcacacattgatcggtaaacttt 2329722  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||| ||||||||||||||| |||||   ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  2329723 ctcaaaacaccattggtgcatcattggagactcataaaaaattatcaactttgcagcacacaccaggtctgccctaggactgtccttttccatagtaagc 2329822  T
Q  208 gatgacgcctcattaatctcaatcgggactg 238  Q
    ||||| ||||| ||||||||||| |||||||    
T  2329823 gatgatgcctccttaatctcaatagggactg 2329853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 48775097 - 48774920
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||| | ||||||||    
T  48775097 tgaaatcaccacctaaaactaccgtcattcctccaaaaggtctaaactcgtttaagggatcattcttggatatgatatcatgcattgattggtcaactgc 48774998  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctagg 185  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  48774997 ttcaaaacaccatcggtgcatcattggagcctcatcacaaattatcaactttgaagcacgcaccaggtctgccctagg 48774920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 169; Significance: 9e-91; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 321098 - 320866
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||| |||||| |||    
T  321098 tgaaatcaccacctaaaactcttgtcattccaccaaaaggtctaaagttgtttaggggatcattcttggacatgatatcacccattgatcgatcaaatgc 320999  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||    
T  320998 ctcaaaacaccatcgatgtatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtcttccctaggactatccttttctatcacaagc 320899  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| ||||||||||||||||| |||||||||    
T  320898 gatgatgcctcattaatctcaatagggactgtc 320866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 319314 - 319246
Alignment:
Q  170 ccaggtctgccctaggactatccttttccatcgtaagcgatgacgcctcattaatctcaatcgggactgtc 240  Q
    |||||||||||||| |||||| |||||||||||||||| |||| | |||| |||||||||| |||||||||    
T  319314 ccaggtctgccctaagactat-cttttccatcgtaagcaatgatgactca-taatctcaatagggactgtc 319246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 9e-91; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 12517731 - 12517963
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||   ||||||| ||||||||||||||||||||||||| || |||| | ||| ||||    
T  12517731 tgaaatcaccacctaaaactactgtcattccaccaaaaggtttaagcgcgtttagaggatcattcttggacatgatatcacacaatgatcggtcagctgc 12517830  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||    
T  12517831 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccatgcctgccctaggactatcattttccatcgtaagc 12517930  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| ||||||||||||||||| |||||||||    
T  12517931 gatgatgcctcattaatctcaatagggactgtc 12517963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 30881783 - 30882014
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  30881783 tgaaatcaccacctaaaacttttgtctttccaccaaaaggtctaaactcgtttaggggatcattcttggacatgatat-acgcattgatcgatcaactgc 30881881  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |  || ||||||||||| |||||||||||||||||||||||||||||    
T  30881882 ctcaaaacaccatcggtgcatcattggagcctcattccatattatcaacttttctacatgcaccaggtcttccctaggactatccttttccatcgtaagc 30881981  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| ||||||||||||||||| |||||||||    
T  30881982 gatgatgcctcattaatctcaatagggactgtc 30882014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 10188571 - 10188711
Alignment:
Q  100 tcaactgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttcca 199  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10188571 tcaactgcctcaaaacaccattggtgcatcattagagcctcattccaaattatcaactttgcagcacgcaccaggtctgccctacgactatccttttcca 10188670  T
Q  200 tcgtaagcgatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  10188671 tcgtaagcgatgatgcctcattaatctcaatagggactgtc 10188711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 2200561 - 2200428
Alignment:
Q  107 cctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaag 206  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2200561 cctcaaaacactatcggtgcatcattggagcctcattccaaattatcaactttgcagcacgcaccaggtctcccctaggactatctttttccatcgtaag 2200462  T
Q  207 cgatgacgcctcattaatctcaatcgggactgtc 240  Q
    |||||| ||||||||||||| ||| |||||||||    
T  2200461 cgatgatgcctcattaatcttaatagggactgtc 2200428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 2201941 - 2201838
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||    
T  2201941 tgaagtcaccacctaaaactactgtcattccaccaaaaggtctaaactcgtttagggggtcattcttggacatgatatcacgctttgatcggtcaactgc 2201842  T
Q  108 ctca 111  Q
    ||||    
T  2201841 ctca 2201838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 1474 - 1705
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||    
T  1474 tgaaatcaccacctaaaactactatcattccaccaaaaggtctaaactcgtttaggggatcattattggacatgatatcacgcattgatcggtcaactgc 1573  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    ||||||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  |||||    
T  1574 ctcaaaacaccatcggtgcatcatttgagcctcaaccaaaattattaactttgcagcacgcaccaggtctgccctaggactatcctttttcattttaagc 1673  T
Q  208 gatgacgcctcattaatctcaatcgggactgt 239  Q
    ||||| ||||||||||| ||||| ||||||||    
T  1674 gatgatgcctcattaatatcaatagggactgt 1705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 19462 - 19693
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    |||||| |||| ||||||||| ||||||||||||||| | | |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  19462 tgaaattaccacctaaaactattgtcattccaccaaatgatttaaactcgtttaggggatcattcttggacatgatatcacgcattgatcggtcaactgc 19561  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  19562 ctcaaaacaccatcagtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgacctaagactatccttttccatcgtaagc 19661  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| |||||| |||||||||| |||| ||||    
T  19662 gatgatgcctca-taatctcaatagggaatgtc 19693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 163; Significance: 3e-87; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 8 - 230
Target Start/End: Original strand, 32389 - 32611
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||   |||||| |||||| | |||||||||||||||||||| |||| | ||| ||||    
T  32389 tgaaatcaccacctaaaactactgtcattccaccaaaaggtttaagcgcgtttacgggatcgtgcttggacatgatatcacgcaatgatcggtcagctgc 32488  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  32489 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaagactatccttttccattgtaagc 32588  T
Q  208 gatgacgcctcattaatctcaat 230  Q
    ||||| |||||||||||||||||    
T  32589 gatgatgcctcattaatctcaat 32611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 210 - 441
Alignment:
Q  10 aaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgcct 109  Q
    ||||||||| ||||||||||||||||||||||||||||| |||   |||||| ||||||||||||| ||||||||||||| | |||| | |||||| |||    
T  210 aaatcaccacctaaaactactgtcattccaccaaaaggtttaagtgcgtttaagggatcattcttgaacatgatatcacgtaatgatcggtcaactacct 309  T
Q  110 caaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagcga 209  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  310 caaaacaccattggtgcatcattggagcctcaccccaaattatcaactttgcagcatgcattaggtctgccctaggactatccttttccatcgtaagcga 409  T
Q  210 tgacgcctcattaatctcaatcgggactgtcg 241  Q
    ||||||||||||||||||||| ||||||||||    
T  410 tgacgcctcattaatctcaatagggactgtcg 441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 187011 - 187240
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| | |||||| |    
T  187011 tgaaatcaccacctaaaactactgtcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcacgcattgatcgttcaactac 187110  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  187111 ctcaaaacaccatgagtgcatcattggagcctcatctcaaattatcaactttgcagcacgcaccagg--tgccctaggactatccttttccatcgtaagc 187208  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||| || ||| |||||||||| |||||||||    
T  187209 gatgatgcgtca-taatctcaatagggactgtc 187240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 14039 - 13808
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatgatatcacgcattgatagatcaactgc 107  Q
    ||||||||||| ||||||||| | ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| |||||||   ||||||||    
T  14039 tgaaatcaccacctaaaactattatcattccaccaaatggtttaaactcgtttaggggatcattcttggacatgatatcactcattgatctgtcaactgc 13940  T
Q  108 ctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgtaagc 207  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13939 ctcaaaacaccattagtgcatcattggagcctcatcccaaattatcatctttgcagcacgcaccaggtctgccctaagactatccttttccatcgtaagc 13840  T
Q  208 gatgacgcctcattaatctcaatcgggactgtc 240  Q
     |||| |||||| |||||||||| |||||||||    
T  13839 aatgatgcctca-taatctcaatagggactgtc 13808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 334 - 98
Alignment:
Q  8 tgaaatcaccatctaaaactactgtcattccaccaaaaggtctaaaatcgtttaggggatcattcttggacatga----tatcacgcattgatagatcaa 103  Q
    ||||||||||| ||||||||||  ||||||||||||||||| |||   ||||||||||||||| |||||||||||    ||||||||| |||| | |||     
T  334 tgaaatcaccacctaaaactaccttcattccaccaaaaggtttaagcgcgtttaggggatcatgcttggacatgaatgatatcacgcaatgatcggtcag 235  T
Q  104 ctgcctcaaaacaccatcggtgcatcattggagcctcatcccaaattatcaactttgcagcacgcaccaggtctgccctaggactatccttttccatcgt 203  Q
    |||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  234 ctgcctcaaaacaccattagtgcatcattggagccttaacccaaattatcaactttgcagcacgcacctggtctgccctaagactatccttttccatcgt 135  T
Q  204 aagcgatgacgcctcattaatctcaatcgggactgtc 240  Q
    ||||||||| ||||| ||||| ||||| | |||||||    
T  134 aagcgatgatgcctcgttaatttcaatagagactgtc 98  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University