View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_347 (Length: 232)

Name: NF9913A_low_347
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_347
NF9913A_low_347
[»] chr3 (9 HSPs)
chr3 (1-232)||(823200-823431)
chr3 (75-228)||(13018094-13018246)
chr3 (1-66)||(1652818-1652883)
chr3 (146-231)||(25594313-25594398)
chr3 (161-213)||(25647930-25647982)
chr3 (161-231)||(14194177-14194247)
chr3 (1-53)||(27399043-27399095)
chr3 (161-213)||(33143733-33143787)
chr3 (155-231)||(40689521-40689597)
[»] chr7 (8 HSPs)
chr7 (18-232)||(40292811-40293025)
chr7 (155-228)||(22567897-22567970)
chr7 (127-231)||(23983416-23983521)
chr7 (154-223)||(36449314-36449383)
chr7 (169-231)||(28534293-28534355)
chr7 (152-231)||(9427884-9427964)
chr7 (2-53)||(3478437-3478488)
chr7 (1-46)||(9428057-9428102)
[»] chr5 (6 HSPs)
chr5 (6-231)||(17853836-17854058)
chr5 (155-231)||(39183968-39184044)
chr5 (1-64)||(39184119-39184182)
chr5 (158-231)||(8731143-8731216)
chr5 (152-231)||(33109962-33110043)
chr5 (163-231)||(24072050-24072117)
[»] chr1 (8 HSPs)
chr1 (7-93)||(16577351-16577437)
chr1 (152-228)||(38548844-38548920)
chr1 (155-229)||(42374386-42374460)
chr1 (146-227)||(49820347-49820427)
chr1 (1-85)||(4651863-4651947)
chr1 (154-227)||(38544524-38544597)
chr1 (170-214)||(2877923-2877967)
chr1 (167-231)||(37200354-37200418)
[»] chr2 (20 HSPs)
chr2 (1-93)||(16952287-16952379)
chr2 (1-93)||(17022952-17023044)
chr2 (1-93)||(17060258-17060350)
chr2 (2-85)||(10173490-10173573)
chr2 (8-93)||(34230292-34230377)
chr2 (155-231)||(13699068-13699144)
chr2 (1-53)||(22885078-22885130)
chr2 (1-53)||(27740059-27740111)
chr2 (1-53)||(33788577-33788629)
chr2 (149-216)||(1946002-1946069)
chr2 (146-230)||(15126192-15126277)
chr2 (156-213)||(22884934-22884991)
chr2 (158-231)||(25504691-25504764)
chr2 (169-212)||(15457214-15457257)
chr2 (154-231)||(27879916-27879995)
chr2 (1-64)||(43816390-43816453)
chr2 (153-187)||(20572308-20572342)
chr2 (159-213)||(43816257-43816311)
chr2 (32-93)||(7696077-7696138)
chr2 (1-29)||(16960066-16960094)
[»] chr4 (7 HSPs)
chr4 (146-231)||(12296389-12296475)
chr4 (2-93)||(19815125-19815216)
chr4 (146-213)||(20632268-20632335)
chr4 (158-216)||(23440203-23440262)
chr4 (8-85)||(41117880-41117957)
chr4 (154-230)||(46487493-46487570)
chr4 (1-53)||(35800573-35800625)
[»] chr8 (4 HSPs)
chr8 (147-228)||(17819576-17819655)
chr8 (8-64)||(15906778-15906834)
chr8 (1-64)||(17720640-17720703)
chr8 (46-91)||(25185357-25185402)
[»] chr6 (2 HSPs)
chr6 (137-228)||(5746819-5746909)
chr6 (8-88)||(20701713-20701793)
[»] scaffold1613 (1 HSPs)
scaffold1613 (154-227)||(803-876)


Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 823431 - 823200
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggtaataaag 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||||||||| |    
T  823431 tttggtgttctttcggtagaccagaggttgagaggtggcggaagctgaatgatcttttcaataggacattttcagatgtggctcaattatggtaataagg 823332  T
Q  101 acaaggtgcttgaaatagagaggtgtttcttttagggtgagtaaaggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttg 200  Q
    ||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  823331 acatggtgtttgaattagagaggtgtttcttttagggtgagtagaggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttg 823232  T
Q  201 ttttaggtggtgaagttaattttggtgggtga 232  Q
    ||||||||||||||||||||||||||||||||    
T  823231 ttttaggtggtgaagttaattttggtgggtga 823200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 13018246 - 13018094
Alignment:
Q  75 gatgtggctcaactatggtaataaagacaaggtgcttgaaatagagaggtgtttcttttagggtgagtaaaggcgaagggtggttatggatatcgttttt 174  Q
    ||||||||||||||||||| || | |||| |||| ||||  ||||  || ||| |||||||||||||||  ||| | ||||| | ||||||||| |||||    
T  13018246 gatgtggctcaactatggtgatgaggacagggtgtttgatttagatgggcgtt-cttttagggtgagtagtggcaatgggtgatcatggatatcattttt 13018148  T
Q  175 cagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgg 228  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13018147 tagtggttgttttgtgatggagtctgttttaggtggtgaagttaattttggtgg 13018094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1652883 - 1652818
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaatagga 66  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||| ||| ||||    
T  1652883 tttggtgttctttcggtggaccggaggttaagcggtggcggaagttgaatgatctttagaaaagga 1652818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 25594398 - 25594313
Alignment:
Q  146 ggcgaagggtggttatggatatcgttttt-cagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    ||||| |||||||| |||||||||||||| ||||||| ||||||||| ||||| |||||||||| |||| ||| ||| |||||||||    
T  25594398 ggcgatgggtggtt-tggatatcgttttttcagtggtcgttttgtgaaggagtatgttttaggtagtgatgtttattgtggtgggtg 25594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 25647930 - 25647982
Alignment:
Q  161 tggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtga 213  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||| |||||||    
T  25647930 tggatatcgtttttcagtggtggtttcgtgatggagtatgttttatgtggtga 25647982  T

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Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 14194177 - 14194247
Alignment:
Q  161 tggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    ||||||||||| ||||||||   ||| |||||||||| ||||||||||||||| ||  |||||||||||||    
T  14194177 tggatatcgttattcagtggcgatttcgtgatggagtctgttttaggtggtgacgtgtattttggtgggtg 14194247  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27399043 - 27399095
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgat 53  Q
    ||||||||||||| ||||||||||||||| |||||||| ||  ||||||||||    
T  27399043 tttggtgttcttttggtggaccagaggttgagaggtggtggttgctgaatgat 27399095  T

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Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 33143787 - 33143733
Alignment:
Q  161 tggatatcgttt-ttcagtggttgtttt-gtgatggagtttgttttaggtggtga 213  Q
    |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||    
T  33143787 tggatatcgtttgttcagtggtggttttcgtgaaggagtttgttttaggtggtga 33143733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 40689597 - 40689521
Alignment:
Q  155 tggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||||||| ||||||||||||| || | ||||||||| | | ||| ||||| ||||||| ||| ||||| |||||||    
T  40689597 tggttatgaatatcgtttttcaatgatcgttttgtgaagaaattttttttaagtggtgatgtttatttttgtgggtg 40689521  T

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Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 40293025 - 40292811
Alignment:
Q  18 ggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggtaataaagacaaggtgcttgaaata 117  Q
    ||||| || ||| |||||||||||||||||||| || |||| |||| |||| ||||||||| |||||| |||||||||| | ||||||||| ||||| ||    
T  40293025 ggaccggatgttgagaggtggcggaagctgaataatcttttcaataagacaatttcggatgcggctcagctatggtaatgaggacaaggtgtttgaatta 40292926  T
Q  118 gagaggtgtttcttttagggtgagtaaaggcgaagggtggttatggatatcg-tttttcagtggttgttttgtgatggagtttgttttaggtggtgaagt 216  Q
     |  |||| ||||||||||||||||| |||||| | |||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||| | ||||||    
T  40292925 taagggtg-ttcttttagggtgagtagaggcgatgagtggttatggatatcgttttttcaatggttgttttgtgatgaagtctgttttaggcgatgaagt 40292827  T
Q  217 taattttggtgggtga 232  Q
    ||||||||||| ||||    
T  40292826 taattttggtgtgtga 40292811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 22567970 - 22567897
Alignment:
Q  155 tggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgg 228  Q
    |||||||||||| ||||||||||||||||||| ||||  |||| ||||||||||||||| ||  ||||||||||    
T  22567970 tggttatggataccgtttttcagtggttgtttcgtgaaagagtctgttttaggtggtgatgtgtattttggtgg 22567897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 23983416 - 23983521
Alignment:
Q  127 ttcttttagggtgagtaaaggcgaagggtggttatggatatcgtttttcagtggttgtttt-gtgatggagtttgttttaggtggtgaagttaattttgg 225  Q
    ||||||| |||||||||  |  || |||| |||||| |||||||||||||||||||||||| ||||  |||| ||||||||||||||  ||| |||||||    
T  23983416 ttcttttggggtgagtagtgatgatgggtagttatgtatatcgtttttcagtggttgttttcgtgaatgagtctgttttaggtggtggtgtttattttgg 23983515  T
Q  226 tgggtg 231  Q
    ||||||    
T  23983516 tgggtg 23983521  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 36449314 - 36449383
Alignment:
Q  154 gtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaatttt 223  Q
    |||||||||||||||||||||||| |||||||| |||| | ||| | ||||||||||||| ||| |||||    
T  36449314 gtggttatggatatcgtttttcagcggttgtttcgtgaagtagtctattttaggtggtgatgtttatttt 36449383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 28534355 - 28534293
Alignment:
Q  169 gtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    ||||||||||||| |||| ||||  |||| ||||||||||||||| ||| |||||||||||||    
T  28534355 gtttttcagtggtcgtttcgtgaaagagtctgttttaggtggtgatgtttattttggtgggtg 28534293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 9427964 - 9427884
Alignment:
Q  152 gggtggttatggatatcgtttttcagtggttgt-tttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    ||||||||||||||||| ||||| ||||||||| || ||||  || |||||||||||| |||| ||| |||||||| ||||    
T  9427964 gggtggttatggatatcattttttagtggttgtcttcgtgaaagaatttgttttaggtagtgatgtttattttggtaggtg 9427884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 3478437 - 3478488
Alignment:
Q  2 ttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgat 53  Q
    ||||||||||||||||||| | ||| |  |||||||||||||||||||||||    
T  3478437 ttggtgttctttcggtggatcggagatcgagaggtggcggaagctgaatgat 3478488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9428102 - 9428057
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagct 46  Q
    |||||||||||||||||||||||||||||  || |||| |||||||    
T  9428102 tttggtgttctttcggtggaccagaggttgtgaagtggtggaagct 9428057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 231
Target Start/End: Complemental strand, 17854058 - 17853836
Alignment:
Q  6 tgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggtaataaagacaag 105  Q
    ||||||||||||||||| || ||| |||||||| ||||| |||||||| ||| ||||| ||| ||||||||||||||||| ||||||| || | ||   |    
T  17854058 tgttctttcggtggacctgaagttgagaggtggtggaagttgaatgatctttagaatatgac-ttttcggatgtggctcagctatggtgatgagga-ttg 17853961  T
Q  106 gtgcttgaaatagagaggtgt-ttcttttagggtgagtaaaggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttgtttt 204  Q
    ||| ||   ||  |||||||| | ||||| |||||||||  || || |||||||||||||||||||||||||||| | |||| || | ||||| ||||||    
T  17853960 gtgttt--catttagaggtgtctacttttggggtgagtagtggtgatgggtggttatggatatcgtttttcagtgatcgtttcgtaaaggagtctgtttt 17853863  T
Q  205 aggtggtgaagttaattttggtgggtg 231  Q
    ||  ||||| ||| |||||||||||||    
T  17853862 agaaggtgatgtttattttggtgggtg 17853836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 39184044 - 39183968
Alignment:
Q  155 tggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||||||||||| |||||||||||||| |||| ||||| |||| |||||||||||||||  || ||||| |||||||    
T  39184044 tggttatggataccgtttttcagtggtcgtttcgtgatagagtctgttttaggtggtgatctttattttagtgggtg 39183968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39184182 - 39184119
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaatag 64  Q
    |||||||||||||||||||||||||||||  ||||| | ||||||||| |||| ||||||||||    
T  39184182 tttggtgttctttcggtggaccagaggttgtgaggtagtggaagctgattgatcttttgaatag 39184119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 8731143 - 8731216
Alignment:
Q  158 ttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||| |||| |||||||||||||| |||| ||||  || | ||||||||||||||| ||| |||||||||||||    
T  8731143 ttattgataccgtttttcagtggtcgtttcgtgaaagactctgttttaggtggtgatgtttattttggtgggtg 8731216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 33110043 - 33109962
Alignment:
Q  152 gggtggttatggatatcgttttt-cagtggttgtttt-gtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||||||  |||||||||||||| ||||||| ||||| |||| || |||||||||||||| ||| ||  |||||||||||||    
T  33110043 gggtggtattggatatcgtttttacagtggtcgttttcgtgaaggggtttgttttaggtgatgacgtgtattttggtgggtg 33109962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 24072117 - 24072050
Alignment:
Q  163 gatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||||||||||| |||||| |||| |||| ||||  ||||||| ||||||| ||| |||||||||||||    
T  24072117 gatatcgttttttagtggtcgtttcgtga-ggagactgttttatgtggtgatgtttattttggtgggtg 24072050  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 16577351 - 16577437
Alignment:
Q  7 gttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggt 93  Q
    ||||||||||| ||   |||||| |||||||| |||||||||||||| ||| ||||||||  |||||||||||||||||||| ||||    
T  16577351 gttctttcggtagattggaggttgagaggtggtggaagctgaatgatctttggaataggagcttttcggatgtggctcaactttggt 16577437  T

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Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 38548920 - 38548844
Alignment:
Q  152 gggtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgg 228  Q
    ||||||||||| |||||||||||||||| | |||| ||||  |||| ||||||||||||||| ||| ||||||||||    
T  38548920 gggtggttatgaatatcgtttttcagtgatcgtttcgtgaaagagtctgttttaggtggtgatgtttattttggtgg 38548844  T

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Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 42374386 - 42374460
Alignment:
Q  155 tggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtggg 229  Q
    ||||||||||||  ||||||||||||| |||| |||| ||| ||||||||||||||||| ||| || ||||||||    
T  42374386 tggttatggatacagtttttcagtggtcgtttcgtgaaggaatttgttttaggtggtgatgtttatcttggtggg 42374460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 49820347 - 49820427
Alignment:
Q  146 ggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtg 227  Q
    ||||| |||||||||||||||||||||||||||| | ||||  | | ||||| | ||||||||||||| ||| |||||||||    
T  49820347 ggcgacgggtggttatggatatcgtttttcagtgctcgtttcat-aaggagtcttttttaggtggtgatgtttattttggtg 49820427  T

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Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4651863 - 4651947
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctca 85  Q
    |||||||||| ||||||||||| ||||||  | ||||| |||||||||||||| ||| ||  ||||  | |||||||||||||||    
T  4651863 tttggtgttccttcggtggaccggaggttgcgcggtggtggaagctgaatgatctttagagaaggagttcttcggatgtggctca 4651947  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 38544597 - 38544524
Alignment:
Q  154 gtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtg 227  Q
    |||||||||||||||||||| ||||| |  ||  ||||  |||| ||||||||||||||| ||| |||||||||    
T  38544597 gtggttatggatatcgttttccagtgatcattccgtgaaagagtctgttttaggtggtgatgtttattttggtg 38544524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 2877923 - 2877967
Alignment:
Q  170 tttttcagtggttgttttgtgatggagtttgttttaggtggtgaa 214  Q
    |||||||| |||||||||| ||||||||||| |||||| ||||||    
T  2877923 tttttcagaggttgttttgcgatggagtttgatttaggcggtgaa 2877967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 37200354 - 37200418
Alignment:
Q  167 tcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||||| ||||||||||||| |||   ||| |||||||||||||||| ||| ||||| |||||||    
T  37200354 tcgtttgtcagtggttgtttcgtggaagagcttgttttaggtggtgatgtttattttagtgggtg 37200418  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16952379 - 16952287
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggt 93  Q
    |||||||||||||||||||| | |||||| |||||||| ||||||| || ||| ||| | ||||||  ||||||||||||| |||||| ||||    
T  16952379 tttggtgttctttcggtggatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggt 16952287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17023044 - 17022952
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggt 93  Q
    |||||||||||||||||||| | |||||| |||||||| ||||||| || ||| ||| | ||||||  ||||||||||||| |||||| ||||    
T  17023044 tttggtgttctttcggtggatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggt 17022952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17060350 - 17060258
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggt 93  Q
    |||||||||||||||||||| | |||||| |||||||| ||||||| || ||| ||| | ||||||  ||||||||||||| |||||| ||||    
T  17060350 tttggtgttctttcggtggatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggt 17060258  T

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Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 10173573 - 10173490
Alignment:
Q  2 ttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctca 85  Q
    ||||||||||||||||| | | |||||  |||||||| ||||| |||||||| ||||||||| ||  |||||||||||||||||    
T  10173573 ttggtgttctttcggtgaatcggaggtcgagaggtggtggaagttgaatgatcttttgaatatgagcttttcggatgtggctca 10173490  T

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Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 34230292 - 34230377
Alignment:
Q  8 ttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggt 93  Q
    ||||||||||||| | |||||| |||||||| |||||||||||||| |||  |||| ||  ||||| |||||||||||||| ||||    
T  34230292 ttctttcggtggatcggaggttgagaggtggtggaagctgaatgatctttcaaataagagcttttcagatgtggctcaactttggt 34230377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 13699144 - 13699068
Alignment:
Q  155 tggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||||||| ||| |||||||||||||| |||| || |  |||| ||||||||||||||| ||| |||||||||||||    
T  13699144 tggttatgtataccgtttttcagtggtcgtttcgtaaaagagtgtgttttaggtggtgatgtttattttggtgggtg 13699068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22885130 - 22885078
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgat 53  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||    
T  22885130 tttggtgttctttcggtggaccagaggttgagaggtggtggaagttgattgat 22885078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27740059 - 27740111
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgat 53  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||| ||||    
T  27740059 tttggtgttctttcggtggaccagaggttgagaggtggtggaaactgattgat 27740111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33788629 - 33788577
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgat 53  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||    
T  33788629 tttggtgttctttcggtgaaccagaggttgagaggtggtggaagctgattgat 33788577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 1946002 - 1946069
Alignment:
Q  149 gaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagt 216  Q
    |||||| | |||||||| |||||||| |||||  ||||| |||||||||||| |||||||||||||||    
T  1946002 gaagggggtttatggatttcgttttttagtggccgttttatgatggagtttgatttaggtggtgaagt 1946069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 15126277 - 15126192
Alignment:
Q  146 ggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttg-ttttaggtggtgaagttaattttggtgggt 230  Q
    ||||| |||||||||||||| | |||||| || ||| |||| ||||  ||||||| ||||||||||||| ||| ||||||||||||    
T  15126277 ggcgatgggtggttatggattttgttttttaggggtggtttcgtgaacgagtttgtttttaggtggtgatgtttattttggtgggt 15126192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 22884991 - 22884934
Alignment:
Q  156 ggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtga 213  Q
    |||||||||| |||||| |||||||| |||| |||| ||||| |||||||||||||||    
T  22884991 ggttatggatttcgtttgtcagtggtcgtttcgtgaaggagtctgttttaggtggtga 22884934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 25504764 - 25504691
Alignment:
Q  158 ttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgggtg 231  Q
    |||| |||| |||||||||||||| |||| ||||  || | ||||||||||||||| ||| |||||||||||||    
T  25504764 ttattgataccgtttttcagtggtcgtttcgtgaaagactctgttttaggtggtgatgtttattttggtgggtg 25504691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 15457214 - 15457257
Alignment:
Q  169 gtttttcagtggttgttttgtgatggagtttgttttaggtggtg 212  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||    
T  15457214 gtttttcagtggttgtttcgtgaaggaatttgttttaggtggtg 15457257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 27879995 - 27879916
Alignment:
Q  154 gtggttatggatatcgtttttcagtggttgtttt-gtgatggagtttgttttaggtggtgaag-ttaattttggtgggtg 231  Q
    |||||||||||| ||||||||||| ||| |||||  ||| ||||| ||||||||||||||| | ||| ||||||||||||    
T  27879995 gtggttatggatttcgtttttcagaggtcgttttcctgaaggagtctgttttaggtggtgatgtttatttttggtgggtg 27879916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43816453 - 43816390
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaatag 64  Q
    |||||| |||||||||||||||||||||| | |||||| ||| ||||| |||| ||| ||||||    
T  43816453 tttggtattctttcggtggaccagaggtttaaaggtggtggaggctgattgatctttagaatag 43816390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 20572308 - 20572342
Alignment:
Q  153 ggtggttatggatatcgtttttcagtggttgtttt 187  Q
    ||||||||||||||||||||||||||||| |||||    
T  20572308 ggtggttatggatatcgtttttcagtggtcgtttt 20572342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 43816311 - 43816257
Alignment:
Q  159 tatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtga 213  Q
    |||||||| ||||||||||||||||||| ||||  |||| | |||||||||||||    
T  43816311 tatggataccgtttttcagtggttgtttcgtgaaagagtctattttaggtggtga 43816257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 7696077 - 7696138
Alignment:
Q  32 gaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggt 93  Q
    ||||||| |||||||||||||| ||| | |||||| ||||  ||||||||||||||| ||||    
T  7696077 gaggtggtggaagctgaatgatctttcggataggagatttgaggatgtggctcaactttggt 7696138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 16960066 - 16960094
Alignment:
Q  1 tttggtgttctttcggtggaccagaggtt 29  Q
    |||||||||||||||||||||||||||||    
T  16960066 tttggtgttctttcggtggaccagaggtt 16960094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 12296389 - 12296475
Alignment:
Q  146 ggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttg-ttttaggtggtgaagttaattttggtgggtg 231  Q
    ||||| |||||||||||||||||||||||||||||| | || |  | ||||| || ||||||||||||| ||| |||||||||||||    
T  12296389 ggcgatgggtggttatggatatcgtttttcagtggtcgcttcggaaaggagtctgtttttaggtggtgatgtttattttggtgggtg 12296475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 19815216 - 19815125
Alignment:
Q  2 ttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaactatggt 93  Q
    ||||||||||||||||||||| |||||  |||| ||| ||||||| |||||| ||| | ||||||  ||||| ||||||||| |||| ||||    
T  19815216 ttggtgttctttcggtggaccggaggtcgagagatggtggaagctaaatgatctttcggataggaacttttccgatgtggctaaactttggt 19815125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 20632335 - 20632268
Alignment:
Q  146 ggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtga 213  Q
    ||||| |||||||||||  ||||||| |||||||||||||||||||  |||| ||||||||| |||||    
T  20632335 ggcgacgggtggttatgtgtatcgttcttcagtggttgttttgtgaaagagtctgttttagggggtga 20632268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 23440262 - 23440203
Alignment:
Q  158 ttatggatatcgtt-tttcagtggttgttttgtgatggagtttgttttaggtggtgaagt 216  Q
    |||||||| ||||| |||||||||| ||||| |||||||||||| |||||||||||||||    
T  23440262 ttatggatttcgttgtttcagtggtcgttttatgatggagtttgatttaggtggtgaagt 23440203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 41117957 - 41117880
Alignment:
Q  8 ttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctca 85  Q
    |||||||| |||| |||||||  |||||||| |||||||||||||| ||| ||||||||  ||| |||| ||||||||    
T  41117957 ttctttcgatggatcagaggtcgagaggtggtggaagctgaatgatctttcgaataggagctttgcggaggtggctca 41117880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 46487493 - 46487570
Alignment:
Q  154 gtggttatggatatcgtttttcagtggttgttttgtgatggagtttg-ttttaggtggtgaagttaattttggtgggt 230  Q
    ||||||||| |||||||||||||||||| | ||  ||| ||||| || ||||||| ||||| ||| ||||||||||||    
T  46487493 gtggttatgaatatcgtttttcagtggtcgcttcatgaaggagtctgtttttaggaggtgatgtttattttggtgggt 46487570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35800573 - 35800625
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgat 53  Q
    |||||||||||||||||||||| ||||||  | ||||| |||| |||||||||    
T  35800573 tttggtgttctttcggtggaccggaggtttcgcggtggtggaacctgaatgat 35800625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 17819655 - 17819576
Alignment:
Q  147 gcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgg 228  Q
    |||||||| | |||||||| ||||||| |||||||||||| | ||||||||||| ||||||||||||||||  |||||||||    
T  17819655 gcgaagggggtttatggatttcgtttt-cagtggttgttt-gcgatggagtttgatttaggtggtgaagttggttttggtgg 17819576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 15906778 - 15906834
Alignment:
Q  8 ttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaatag 64  Q
    ||||||| ||||||||||||||||||||||| ||||| ||| |||||| | ||||||    
T  15906778 ttctttcagtggaccagaggttaagaggtggtggaagatgattgatttatagaatag 15906834  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17720703 - 17720640
Alignment:
Q  1 tttggtgttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaatag 64  Q
    |||||||||||||||||||||  |||||| |||||||| ||||| ||| |||| ||| ||||||    
T  17720703 tttggtgttctttcggtggacttgaggttgagaggtggtggaagttgattgatctttagaatag 17720640  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 25185402 - 25185357
Alignment:
Q  46 tgaatgattttttgaataggacattttcggatgtggctcaactatg 91  Q
    |||||||| ||| ||||| ||||||||||||||||||||| |||||    
T  25185402 tgaatgatctttagaatatgacattttcggatgtggctcagctatg 25185357  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 5746819 - 5746909
Alignment:
Q  137 gtgagtaaaggcgaagggtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtgg 228  Q
    |||||||  ||||| ||||| |||||||| | ||||||||||||||| |||| |||||||| ||||||||| |||||| ||  |||||||||    
T  5746819 gtgagtagcggcgatgggtgcttatggatttagtttttcagtggttg-tttgcgatggagtatgttttaggcggtgaaattggttttggtgg 5746909  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 20701793 - 20701713
Alignment:
Q  8 ttctttcggtggaccagaggttaagaggtggcggaagctgaatgattttttgaataggacattttcggatgtggctcaact 88  Q
    ||||||||||||| | |||||  |||||| | |||||||||||||| ||| | ||||||  |||||| |||||||||||||    
T  20701793 ttctttcggtggatcggaggtcgagaggtagtggaagctgaatgatctttcggataggagcttttcgaatgtggctcaact 20701713  T

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Target: scaffold1613 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 876 - 803
Alignment:
Q  154 gtggttatggatatcgtttttcagtggttgttttgtgatggagtttgttttaggtggtgaagttaattttggtg 227  Q
    |||||||||||||||||||| ||||| |  ||  ||||  |||| ||||||||||||||| ||| |||||||||    
T  876 gtggttatggatatcgttttccagtgatcattccgtgaaagagtctgttttaggtggtgatgtttattttggtg 803  T

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