View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_386 (Length: 229)

Name: NF9913A_low_386
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_386
NF9913A_low_386
[»] chr3 (30 HSPs)
chr3 (1-224)||(12501814-12502037)
chr3 (1-224)||(16803973-16804196)
chr3 (1-224)||(11861234-11861457)
chr3 (38-224)||(14873611-14873797)
chr3 (16-224)||(23079043-23079251)
chr3 (1-224)||(15065952-15066175)
chr3 (1-224)||(16695045-16695268)
chr3 (1-224)||(23414816-23415039)
chr3 (38-224)||(17497609-17497795)
chr3 (1-224)||(10008481-10008701)
chr3 (1-224)||(10909091-10909311)
chr3 (1-224)||(20059083-20059303)
chr3 (1-191)||(15399580-15399767)
chr3 (1-191)||(24186071-24186258)
chr3 (1-224)||(3688824-3689044)
chr3 (1-224)||(15713085-15713305)
chr3 (1-224)||(43165556-43165776)
chr3 (1-224)||(6603616-6603836)
chr3 (1-224)||(12889590-12889810)
chr3 (1-224)||(15345274-15345494)
chr3 (1-224)||(16638654-16638874)
chr3 (1-224)||(48428328-48428548)
chr3 (38-224)||(12843129-12843315)
chr3 (1-224)||(5110438-5110658)
chr3 (1-224)||(13255571-13255791)
chr3 (127-224)||(14578447-14578544)
chr3 (1-224)||(26790442-26790662)
chr3 (1-224)||(53382048-53382267)
chr3 (46-224)||(6596981-6597156)
chr3 (98-191)||(15359027-15359120)
[»] chr2 (29 HSPs)
chr2 (1-224)||(24704809-24705032)
chr2 (1-225)||(24656984-24657208)
chr2 (38-224)||(24678417-24678603)
chr2 (13-224)||(23028789-23028999)
chr2 (38-224)||(21320330-21320516)
chr2 (2-225)||(23116385-23116608)
chr2 (38-224)||(22742293-22742479)
chr2 (1-224)||(22462808-22463031)
chr2 (38-224)||(23105054-23105240)
chr2 (38-224)||(23039904-23040090)
chr2 (38-224)||(22733101-22733287)
chr2 (84-224)||(20320956-20321096)
chr2 (1-224)||(10871743-10871963)
chr2 (1-182)||(24874122-24874300)
chr2 (1-224)||(17001893-17002113)
chr2 (1-224)||(24265263-24265483)
chr2 (1-104)||(11351158-11351261)
chr2 (1-148)||(23205207-23205354)
chr2 (1-148)||(23676811-23676958)
chr2 (1-224)||(9338475-9338695)
chr2 (1-224)||(9487109-9487329)
chr2 (1-224)||(22322672-22322892)
chr2 (1-224)||(44382900-44383120)
chr2 (1-191)||(24712927-24713114)
chr2 (52-146)||(23065357-23065451)
chr2 (52-146)||(23074807-23074901)
chr2 (1-224)||(16984133-16984353)
chr2 (1-182)||(27374162-27374340)
chr2 (166-224)||(23029819-23029877)
[»] scaffold1459 (1 HSPs)
scaffold1459 (1-224)||(882-1105)
[»] chr6 (20 HSPs)
chr6 (1-225)||(27558900-27559124)
chr6 (21-228)||(21764958-21765165)
chr6 (1-225)||(25756546-25756770)
chr6 (13-224)||(22437007-22437218)
chr6 (88-224)||(19867869-19868005)
chr6 (1-228)||(5836159-5836383)
chr6 (1-224)||(24292717-24292937)
chr6 (1-191)||(25115678-25115865)
chr6 (38-153)||(18404947-18405062)
chr6 (1-224)||(2871737-2871957)
chr6 (1-224)||(27205748-27205968)
chr6 (1-224)||(27243260-27243480)
chr6 (1-191)||(22829354-22829541)
chr6 (1-224)||(29589374-29589594)
chr6 (1-224)||(16575016-16575236)
chr6 (1-224)||(16620144-16620364)
chr6 (46-224)||(28312801-28312976)
chr6 (142-227)||(21566920-21567005)
chr6 (132-191)||(24515379-24515438)
chr6 (142-191)||(34642550-34642599)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-225)||(28717-28941)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-225)||(3155-3379)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-225)||(16855-17079)
scaffold0017 (84-220)||(194662-194798)
scaffold0017 (177-225)||(21377-21425)
[»] chr5 (21 HSPs)
chr5 (1-228)||(23461165-23461392)
chr5 (38-224)||(21883006-21883192)
chr5 (1-224)||(20803791-20804014)
chr5 (38-224)||(23526282-23526468)
chr5 (1-220)||(18782308-18782527)
chr5 (98-224)||(23537184-23537310)
chr5 (38-224)||(25429651-25429837)
chr5 (1-224)||(22329859-22330079)
chr5 (1-224)||(19773154-19773374)
chr5 (1-224)||(27521600-27521820)
chr5 (1-224)||(37288468-37288688)
chr5 (1-191)||(22137862-22138049)
chr5 (1-224)||(27613550-27613770)
chr5 (1-224)||(27682372-27682592)
chr5 (1-224)||(41774036-41774256)
chr5 (1-224)||(16359696-16359916)
chr5 (1-224)||(34569688-34569908)
chr5 (1-191)||(14996744-14996931)
chr5 (43-224)||(29473045-29473223)
chr5 (1-191)||(22351113-22351300)
chr5 (136-227)||(21631365-21631456)
[»] scaffold0289 (1 HSPs)
scaffold0289 (1-228)||(79-306)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-228)||(36789-37016)
[»] chr7 (20 HSPs)
chr7 (1-224)||(11984243-11984466)
chr7 (1-225)||(9591615-9591839)
chr7 (4-225)||(17703250-17703471)
chr7 (4-225)||(16726236-16726457)
chr7 (1-224)||(18180994-18181214)
chr7 (53-223)||(15145720-15145890)
chr7 (1-224)||(15157856-15158076)
chr7 (1-191)||(11549934-11550121)
chr7 (1-224)||(13689292-13689512)
chr7 (1-191)||(12690752-12690939)
chr7 (1-224)||(11234012-11234232)
chr7 (1-224)||(44788150-44788370)
chr7 (1-178)||(14957759-14957933)
chr7 (1-224)||(8710856-8711076)
chr7 (127-224)||(14043072-14043169)
chr7 (127-224)||(14353102-14353199)
chr7 (136-227)||(15627910-15628001)
chr7 (1-224)||(14335647-14335867)
chr7 (133-227)||(14283145-14283239)
chr7 (1-224)||(18586970-18587190)
[»] scaffold0029 (2 HSPs)
scaffold0029 (38-224)||(8542-8728)
scaffold0029 (106-191)||(107600-107685)
[»] scaffold0080 (5 HSPs)
scaffold0080 (1-224)||(32170-32393)
scaffold0080 (1-225)||(10028-10252)
scaffold0080 (1-225)||(12683-12907)
scaffold0080 (84-224)||(55011-55151)
scaffold0080 (1-74)||(37636-37709)
[»] chr1 (20 HSPs)
chr1 (1-224)||(24784716-24784939)
chr1 (1-224)||(21228415-21228638)
chr1 (38-224)||(21176681-21176867)
chr1 (1-225)||(17041874-17042097)
chr1 (1-224)||(22435602-22435815)
chr1 (38-224)||(20081235-20081421)
chr1 (38-224)||(22401906-22402092)
chr1 (38-224)||(22496115-22496301)
chr1 (1-224)||(51330354-51330574)
chr1 (1-191)||(21842489-21842676)
chr1 (1-224)||(21833579-21833799)
chr1 (1-224)||(16347457-16347677)
chr1 (1-224)||(33387891-33388111)
chr1 (133-224)||(16379503-16379594)
chr1 (1-218)||(41350536-41350750)
chr1 (98-191)||(19109741-19109834)
chr1 (1-182)||(22400597-22400775)
chr1 (133-223)||(21752456-21752546)
chr1 (129-192)||(24096506-24096569)
chr1 (132-192)||(19857713-19857773)
[»] scaffold0451 (1 HSPs)
scaffold0451 (1-225)||(13821-14045)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-225)||(432-656)
[»] scaffold1220 (1 HSPs)
scaffold1220 (1-228)||(27-254)
[»] scaffold0177 (2 HSPs)
scaffold0177 (1-224)||(14831-15054)
scaffold0177 (1-224)||(11146-11369)
[»] scaffold0044 (2 HSPs)
scaffold0044 (4-224)||(17454-17674)
scaffold0044 (46-224)||(3760-3935)
[»] scaffold1881 (1 HSPs)
scaffold1881 (1-224)||(270-493)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-224)||(229642-229865)
[»] chr8 (21 HSPs)
chr8 (38-224)||(21163760-21163946)
chr8 (1-224)||(22043155-22043378)
chr8 (1-224)||(30310374-30310597)
chr8 (4-224)||(15536714-15536934)
chr8 (1-225)||(32603473-32603697)
chr8 (38-224)||(19981332-19981518)
chr8 (16-224)||(21391091-21391299)
chr8 (16-224)||(21780417-21780625)
chr8 (38-224)||(18880887-18881073)
chr8 (1-224)||(18859905-18860125)
chr8 (1-116)||(22031431-22031545)
chr8 (1-224)||(22126192-22126412)
chr8 (127-223)||(21671969-21672065)
chr8 (1-218)||(19481311-19481525)
chr8 (1-224)||(17671255-17671475)
chr8 (1-224)||(19115728-19115948)
chr8 (1-224)||(20015496-20015716)
chr8 (98-224)||(22117408-22117534)
chr8 (110-224)||(22421123-22421237)
chr8 (132-228)||(21928887-21928983)
chr8 (128-228)||(28984366-28984466)
[»] chr4 (18 HSPs)
chr4 (1-224)||(18224000-18224223)
chr4 (39-224)||(16248203-16248388)
chr4 (1-225)||(13513612-13513836)
chr4 (4-225)||(18604345-18604566)
chr4 (85-228)||(16350265-16350408)
chr4 (112-224)||(15144475-15144587)
chr4 (1-224)||(14300509-14300729)
chr4 (1-224)||(19635398-19635618)
chr4 (1-191)||(14683829-14684016)
chr4 (1-224)||(8050153-8050373)
chr4 (121-192)||(14162852-14162923)
chr4 (1-224)||(17091679-17091899)
chr4 (46-180)||(40476347-40476478)
chr4 (38-223)||(8335-8520)
chr4 (1-224)||(8389674-8389894)
chr4 (1-224)||(12479862-12480082)
chr4 (1-224)||(16233522-16233742)
chr4 (1-224)||(27714598-27714818)
[»] scaffold0412 (1 HSPs)
scaffold0412 (1-227)||(15366-15592)
[»] scaffold0819 (1 HSPs)
scaffold0819 (41-224)||(445-628)
[»] scaffold0285 (1 HSPs)
scaffold0285 (1-224)||(5289-5512)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-224)||(14715-14938)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-224)||(139400-139623)
scaffold0008 (1-224)||(141-363)
[»] scaffold0042 (1 HSPs)
scaffold0042 (38-224)||(36610-36796)
[»] scaffold0034 (1 HSPs)
scaffold0034 (52-224)||(121966-122138)
[»] scaffold2059 (1 HSPs)
scaffold2059 (1-224)||(559-782)
[»] scaffold0297 (1 HSPs)
scaffold0297 (13-224)||(7447-7658)
[»] scaffold0273 (1 HSPs)
scaffold0273 (38-224)||(368-554)
[»] scaffold0023 (2 HSPs)
scaffold0023 (13-224)||(30364-30575)
scaffold0023 (38-224)||(43243-43429)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-224)||(171409-171632)
[»] scaffold0501 (1 HSPs)
scaffold0501 (16-222)||(230-436)
[»] scaffold0120 (2 HSPs)
scaffold0120 (16-224)||(14390-14598)
scaffold0120 (16-224)||(11569-11777)
[»] scaffold1423 (1 HSPs)
scaffold1423 (38-224)||(168-354)
[»] scaffold0081 (2 HSPs)
scaffold0081 (38-224)||(21932-22118)
scaffold0081 (38-224)||(37356-37542)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-225)||(7568-7792)
[»] scaffold0064 (1 HSPs)
scaffold0064 (84-224)||(66320-66460)
[»] scaffold0102 (1 HSPs)
scaffold0102 (38-224)||(50135-50321)
[»] scaffold0550 (1 HSPs)
scaffold0550 (1-153)||(10019-10171)
[»] scaffold0403 (2 HSPs)
scaffold0403 (84-223)||(15285-15424)
scaffold0403 (134-225)||(1-92)
[»] scaffold0611 (1 HSPs)
scaffold0611 (16-224)||(9233-9441)
[»] scaffold0198 (1 HSPs)
scaffold0198 (38-222)||(30615-30799)
[»] scaffold0319 (1 HSPs)
scaffold0319 (92-224)||(6882-7014)
[»] scaffold0114 (1 HSPs)
scaffold0114 (84-220)||(17143-17279)
[»] scaffold0540 (1 HSPs)
scaffold0540 (84-222)||(10672-10810)
[»] scaffold0022 (1 HSPs)
scaffold0022 (112-224)||(34561-34673)
[»] scaffold0411 (1 HSPs)
scaffold0411 (84-223)||(8785-8924)
[»] scaffold0084 (1 HSPs)
scaffold0084 (38-224)||(8551-8737)
[»] scaffold0490 (1 HSPs)
scaffold0490 (84-223)||(265-404)
[»] scaffold0993 (1 HSPs)
scaffold0993 (127-224)||(1399-1496)
[»] scaffold0324 (1 HSPs)
scaffold0324 (38-223)||(2317-2502)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-229)||(170-398)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-229)||(12909-13137)
scaffold0109 (38-182)||(41483-41624)
[»] scaffold0309 (1 HSPs)
scaffold0309 (124-223)||(19812-19911)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-191)||(10659-10846)
[»] scaffold0358 (1 HSPs)
scaffold0358 (91-223)||(9328-9460)
[»] scaffold0218 (1 HSPs)
scaffold0218 (124-220)||(24520-24616)
[»] scaffold0243 (1 HSPs)
scaffold0243 (16-224)||(23735-23943)
[»] scaffold0207 (1 HSPs)
scaffold0207 (92-220)||(4349-4477)
[»] scaffold0278 (1 HSPs)
scaffold0278 (88-223)||(3929-4064)
[»] scaffold0122 (1 HSPs)
scaffold0122 (16-223)||(40298-40505)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-224)||(424599-424822)
[»] scaffold0789 (1 HSPs)
scaffold0789 (1-153)||(229-378)
[»] scaffold0028 (3 HSPs)
scaffold0028 (1-185)||(55295-55476)
scaffold0028 (1-132)||(21288-21416)
scaffold0028 (1-132)||(11760-11888)
[»] scaffold0423 (1 HSPs)
scaffold0423 (92-153)||(2124-2185)
[»] scaffold0075 (1 HSPs)
scaffold0075 (38-223)||(48058-48243)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-191)||(8549-8736)
[»] scaffold0053 (1 HSPs)
scaffold0053 (133-227)||(65109-65203)
[»] scaffold0167 (1 HSPs)
scaffold0167 (132-185)||(5475-5528)
[»] scaffold0507 (1 HSPs)
scaffold0507 (136-224)||(11454-11542)
[»] scaffold0100 (1 HSPs)
scaffold0100 (145-228)||(16395-16478)
[»] scaffold0006 (1 HSPs)
scaffold0006 (84-223)||(104600-104739)
[»] scaffold0621 (2 HSPs)
scaffold0621 (106-224)||(413-531)
scaffold0621 (106-224)||(4830-4948)
[»] scaffold0333 (1 HSPs)
scaffold0333 (127-179)||(19067-19119)
[»] scaffold0020 (1 HSPs)
scaffold0020 (132-192)||(98405-98465)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 12501814 - 12502037
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12501814 ttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaattgaaacaggtaatctcagcaggaacat 12501913  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||  |||||||| |||| |||    
T  12501914 ccttcttcttaggccgtctttcctcgaccatcctctgttttcccttatcagcaggggcactatagggcttagggcgactctactggcccttggtcttccg 12502013  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  12502014 ctcattcacaaccttgtaatgagc 12502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16804196 - 16803973
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||| ||||||||||||| |||||||||||||| |||||||||||| | ||||||||||| ||| |||    
T  16804196 ttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcat 16804097  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||| |||    
T  16804096 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttggtcttccg 16803997  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  16803996 ctcattcacaaccttgtaatgagc 16803973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 11861234 - 11861457
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| || |||||||||||| || |||||  ||||||||||||| |||||||||||||| |||||||||||||||  |||||| |||||| |||    
T  11861234 ttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatctccgcaggagcat 11861333  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| ||||||||||| ||||||||| | |||||||||||||||||| ||||||| ||||||||| ||| ||     
T  11861334 ccttcttcttaggccgcctatcatcgaccattctctgtttgcctttatcagcaggggcactatagggcttagggtgactctggtggcccttactcttcca 11861433  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  11861434 ctcattcacaaccttgtaatgagc 11861457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 14873797 - 14873611
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| || ||||||||||| |||||||| ||| ||  |||||||||| || ||||||| ||| | |||||||| |||||||||||||||||    
T  14873797 gacaagcattgctcttatggcctttctcaccacaattaaaacagacaatctcagcatgagcatccttcttcctcggccgtctatcctcgaccatcctctg 14873698  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  14873697 tttgcccttatcagcaagggcattatagggcttagggcgactctgttggcccttagtcttccgcacattcacaatcttgtaatgagc 14873611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 23079251 - 23079043
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| ||||||| ||| |  ||||||||||||| |||||||||||||| |||||||| ||| |   |||| |||||||| ||||||| ||| | ||||    
T  23079251 aaacatctctttacctcccccggacaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatccttcttccttggcc 23079152  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    |||| |||||||||||||||||||| |||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| |||    
T  23079151 gtctatcctcgaccatcctctgttttcccttatcagcaggggcactataaggcttagggcgactctgctggcccttagtcttccgctcattcacaatctt 23079052  T
Q  216 gtaatgagc 224  Q
    |||||||||    
T  23079051 gtaatgagc 23079043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 15065952 - 15066175
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| |||||||||| | ||||| || ||  ||||||||||||| |||||||||||||| |||||||| ||| ||  |||| |||||||| |||    
T  15065952 ttcttaccacaccggaaacatctttttacctcttctggacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatcgcagcaggagcat 15066051  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||| | |||||||| || |||||||| ||||||||||||||||||||| | | |||||||||||||||||||||||| ||||||||||||| |||    
T  15066052 ccttcttccttggccgtctatcatcgaccattctctgtttgcccttatcagcaggggaactatagggcttagggcgactctgctggcccttagtcttccg 15066151  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| | ||||||||||||    
T  15066152 ctcattcaccatcttgtaatgagc 15066175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16695045 - 16695268
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  ||| |  |||||||||| || ||| ||||||||||||||||||||||| | ||||||||||| ||| |||    
T  16695045 ttcttgccacaccggacacatttcttgatctccaccggacaaacattactcttgcggcctttctcgccacaattgaaacaagtaatctcagctggagcat 16695144  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||||||||| |||||||||| | |||||||| ||||| ||||||||||| |||||||| |||| ||     
T  16695145 ccttcttcttaggccgcctatcatcgaccattctctgtttgcacttatcagcaggggcactataaggcttcgggcgactctgatggcccttggtcttcca 16695244  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    |||||| |||||||||||||||||    
T  16695245 ctcatttacaaccttgtaatgagc 16695268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 23415039 - 23414816
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||| ||| ||||| ||||||||| |  || | | |||||||||| || |||||||||||||||||| | |||||| ||  |||||| |||||| |||    
T  23415039 ttcttgtcacaccggacacatttcttgatctctttaggacaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcat 23414940  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||| ||||||||| |||| |||    
T  23414939 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactataaggcttagggcgactctattggcccttggtcttccg 23414840  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||| ||||||    
T  23414839 ctcattcacaaccttgtcatgagc 23414816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 17497609 - 17497795
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| | ||| ||  |||||| |||||| ||||||| |||||||||  ||| || ||||||||| ||||    
T  17497609 gacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatccttcttcttaggctatctatcttcgaccatcttctg 17497708  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||||| | ||| || ||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||||    
T  17497709 tttgcccttatcagcaagggtactgtaaggcttagggcgactctgctgacccttagtcttccgctcattcacaatcttgtaatgagc 17497795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10008481 - 10008701
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  10008481 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 10008577  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || ||||||  || ||     
T  10008578 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcct 10008677  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  10008678 ctcattcactaccttgtagtgagc 10008701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10909091 - 10909311
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| |||   ||||    
T  10909091 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgca---acat 10909187  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || ||||||  || ||     
T  10909188 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcct 10909287  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  10909288 ctcattcactaccttgtagtgagc 10909311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20059303 - 20059083
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  20059303 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 20059207  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   || ||     
T  20059206 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 20059107  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  20059106 ttcattcactaccttgtagtgagc 20059083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 15399767 - 15399580
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || |||||||| |||||||||||| | |||||||||||| |   |||||||| ||   |||    
T  15399767 ttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---cat 15399671  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||| ||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||    
T  15399670 ccttcttcttaggccgcctatcatcgaccatcttctgtttccctttatcagcgggggcactgtacggcttaggacgactctgctgtccctt 15399580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 24186071 - 24186258
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| |  || ||| |||| |||||||| |||||||||||| | |||||||||||| |   |||||||| ||   |||    
T  24186071 ttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtggcctttcacaccacaattgaaacacacaatctcagtag---cat 24186167  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||    
T  24186168 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcgtgggcactgtacggcttaggacgactctgctgtccctt 24186258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 3688824 - 3689044
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | |||||||  |||  | ||||| |||||||||||||| |||||||||||  |   |||||||||||   |||    
T  3688824 ttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctcagcag---cat 3688920  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| ||||| |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  3688921 ccttcttcttaggccgcctaacgtcgaccatcttctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 3689020  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  3689021 ctcattcactaccttgtagtgagc 3689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15713305 - 15713085
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||| ||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| | ||   |||    
T  15713305 ttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgtag---cat 15713209  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||||||||| || || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  15713208 ccttcttcttaggccgcctatcatcgaccatcctctgcttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 15713109  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  15713108 ctcattcactaccttgtagtgagc 15713085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 43165556 - 43165776
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  43165556 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 43165652  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  43165653 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 43165752  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  43165753 ctcattcactaccttgtagtgagc 43165776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 6603616 - 6603836
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  6603616 ttcttaccacaccggacacagttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 6603712  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  6603713 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 6603812  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  6603813 ctcattcactaccttgtagtgagc 6603836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 12889590 - 12889810
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  12889590 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 12889686  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  12889687 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 12889786  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  12889787 ttcattcactaccttgtagtgagc 12889810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15345494 - 15345274
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  15345494 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 15345398  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || ||||||||  ||||||| || |||||   || ||     
T  15345397 ccttcttcttaggccgcctaacatcgaccatcttctgtttacctttgtcagcgggggcactgtacggcttaggaggactctgctgtcccttgcccttcct 15345298  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  15345297 ttcattcactaccttgtagtgagc 15345274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16638654 - 16638874
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||  ||| ||||| | ||| ||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  16638654 ttcttgccacaccgggcacacttcttgatttcttcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 16638750  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  16638751 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 16638850  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  16638851 ctcattcactaccttgtagtgagc 16638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 48428328 - 48428548
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  48428328 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 48428424  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  48428425 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 48428524  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  48428525 ttcattcactaccttgtagtgagc 48428548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 12843315 - 12843129
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| |  |  ||  ||||||| ||||| |||| || ||| ||||||| || || || | ||| |||||    
T  12843315 gacaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatcaatcattctctg 12843216  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| ||||||||||  |||| || |||||||| || || ||    |  ||||||||||||| ||||||||||||    
T  12843215 tttgcccttatcagcaggagcactataaagctttggacgactctgctgacctttgacttttcgctcattcacaatcttgtaatgagc 12843129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 5110658 - 5110438
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  5110658 ttcttgccacaccggacacacttcttaatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 5110562  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||| | ||  | ||||||||| ||||||| || || |||||  |  |||| || |||||||| ||||||| ||| |||||   || ||     
T  5110561 ccttcttcttaggctgcctaacatcgaccatcttctgtttacctttgtcagcggggacactgtacggcttaggacgactctattgtcccttgcccttcct 5110462  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  5110461 ttcattcactaccttgtagtgagc 5110438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 13255571 - 13255791
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | |||||||  |||| | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  13255571 ttcttaccacaccggacacacttcttgatttcctcagaacaagcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 13255667  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    ||||  |||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  13255668 ccttcctcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 13255767  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  13255768 ctcattcactaccttgtagtgagc 13255791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 14578544 - 14578447
Alignment:
Q  127 accatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||| |||||||| |||||||| ||| ||||| | || |||||||| || ||||| || ||||| | || |||||||||||||| ||||||||||||    
T  14578544 accattctctgtttacccttatcggcaggagcattgtaaggcttaggacggctctgctgacccttggccttccgctcattcacaatcttgtaatgagc 14578447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 26790662 - 26790442
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| |  | || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  26790662 ttcttgccacaccggacacacttcttgatttcctcagggtagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 26790566  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||    | ||||| || |||||||| |||||||| || |||||   || ||     
T  26790565 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcattgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 26790466  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  26790465 ttcattcactaccttgtagtgagc 26790442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 53382267 - 53382048
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| |||| || ||||| |||||||||||||||||||| |||||  |   |||||| ||||   |||    
T  53382267 ttcttaccacaccggacacacttcttgatttcctcaggacagacgttgctcttgtggcctttctcgccacagttgaagcacacaatctctgcag---cat 53382171  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || ||||   | ||||| || |||||||| |||||||| || |||||   || ||     
T  53382170 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcag-gggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 53382072  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  53382071 ctcattcactaccttgtagtgagc 53382048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 6596981 - 6597156
Alignment:
Q  46 ttgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgccct 145  Q
    ||||| |||||||||||||| |||||||||||  |   |||||| ||||   ||||||| ||||||||||| ||  | ||||||||| ||||||| || |    
T  6596981 ttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---catccttcttcttaggccgcctaacatcgaccatcttctgtttccctt 6597077  T
Q  146 tatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    | |||||  | ||||| || |||||||| |||||||| || |||||   || || ||||||||| |||||||| |||||    
T  6597078 tgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagc 6597156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 15359027 - 15359120
Alignment:
Q  98 catccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    ||||||| ||||||||||| || || ||||||||| |||||||  | ||||||||  | ||||| || ||||||||||||||||| || |||||    
T  15359027 catccttcttcttaggccgcctatcatcgaccatcttctgtttcactttatcagcgggggcactgtacggcttagggcgactctgctgtccctt 15359120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 24705032 - 24704809
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| | |||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||||||    
T  24705032 ttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccacaattgaaacagataatctcagcaggaacat 24704933  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| | |    
T  24704932 ccttcttcttaggtcgtctttcctcgaccatcctatgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttctg 24704833  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  24704832 ctcattcacaaccttgtaatgagc 24704809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 24657208 - 24656984
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||| ||||| || |||||| |||||||| | || |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  24657208 ttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagcaggaacat 24657109  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||||||| |||    
T  24657108 cctttttcttaggccgtctctcctcgaccatcctctgtttgcccttatcagtaggggcactatagggcttagggcgactctgctggcccttagtcttccg 24657009  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  24657008 ctcattaacaaccttgtaatgagct 24656984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 24678417 - 24678603
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||||| ||  ||  ||||||||||||||||||||| |||||||||||||| || ||||||||||||||    
T  24678417 gacaagcattgctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggccgtctatcatcgaccatcctctg 24678516  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | || |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||||||    
T  24678517 tttgcccttatcagcaggggcgctatagggcttagggcgactctattggcccttagtcttccgctcattcacgatcttgtaatgagc 24678603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 23028999 - 23028789
Alignment:
Q  13 cggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttag 112  Q
    ||||||||| ||||||| ||  || ||||| ||||||| |||||||||||||| |||||||  ||| ||  ||||||||||||| ||||||| ||| | |    
T  23028999 cggaaacatctctttacctctccaggacaagcattgctcttgtggcctttctcaccacaata-aaacagacaatctcagcaggagcatccttcttccttg 23028901  T
Q  113 gccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaac 212  Q
    ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||     
T  23028900 gccgtctatcctcgaccatcctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggcctttagtattccgctcattcacaat 23028801  T
Q  213 cttgtaatgagc 224  Q
    ||||||||||||    
T  23028800 cttgtaatgagc 23028789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 21320516 - 21320330
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| ||||||||||||||||||||||| ||| ||  |||||||||||| |||||||| ||||||||||| || ||||||||||| || ||    
T  21320516 gacaagcattgctcttgtggcctttctcgccacaattaaaacagacaatctcagcagggacatccttcttcttaggccgcctatcctcgaccattctttg 21320417  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | |  ||||| |||||||||| |||||| |||||| |||||| |||||||||||||| ||||||||||||    
T  21320416 tttgcccttatcagcaggggtgctataaggcttagggcaactctgctggcccctagtcttccgctcattcacaatcttgtaatgagc 21320330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 23116608 - 23116385
Alignment:
Q  2 tcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatc 101  Q
    |||||| || ||||| ||||||||| |  || ||| |||||||||| || |||||||||||| ||||||| |||||| |   |||||| | |||| ||||    
T  23116608 tcttgctacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagcatc 23116509  T
Q  102 cttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgc 201  Q
    ||| ||||||||||| || || |||||||| ||||| ||||||||||||||| | |||||||| ||||||||||||||||| | ||||||||||| || |    
T  23116508 cttcttcttaggccgcctatcatcgaccattctctgcttgcccttatcagcaggggcactataaggcttagggcgactctgcttgcccttagtcttcctc 23116409  T
Q  202 tcattcacaaccttgtaatgagct 225  Q
    ||||| ||||||||||||||||||    
T  23116408 tcattaacaaccttgtaatgagct 23116385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 22742479 - 22742293
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| ||||||| |||||| |||||||| ||  ||  ||||||| ||| ||||||||| ||| | |||||||| ||||| ||||| |||||    
T  22742479 gacaagcattgctcttgtggcatttctcaccacaattaaagcagacaatctcaccagcaacatccttcttcctcggccgtctatcctcaaccattctctg 22742380  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | |||||||| ||||||||||||||||| || |||||||||| |||||||||||| ||||||||||||||    
T  22742379 tttgcccttatcagcaggggcactataaggcttagggcgactctgctgacccttagtcttccgctcattcacgaccttgtaatgagc 22742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22463031 - 22462808
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| | ||| ||||||||| |  || ||| |||||||||| || |||||||||||||| ||||| |||||| |   |||||| |||||| |||    
T  22463031 ttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcat 22462932  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||  || || |||||||| ||||||| |||||||| || | | |||||||| ||||||||||||||||| |||||||| |||| |||    
T  22462931 ccttcttcttaggccacctatcatcgaccattctctgttcgcccttattagaaggggcactataaggcttagggcgactctgctggcccttggtcttccg 22462832  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    |||||| |||||||||||||||||    
T  22462831 ctcatttacaaccttgtaatgagc 22462808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 23105240 - 23105054
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||| ||||| ||||||  |||| |  |||||||||||||| ||||||| ||| | |||||||| || |||||||| |||||    
T  23105240 gacaagcattactcttgtggcccttctcaccacaagagaaacaaataatctcagcaggagcatccttcttcctcggccgtctatcttcgaccattctctg 23105141  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | ||||| || ||||||||||| ||||| ||||||||||||| | |||||||||||| ||||||||||||    
T  23105140 tttgcccttatcagcaggtgcactgtaaggcttagggcggctctgctggcccttagtcttctgctcattcacaatcttgtaatgagc 23105054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 23040090 - 23039904
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||| ||||| ||||||   ||| ||  |||||| | |||| ||||||| ||||||||||||||  | ||||||||||||||    
T  23040090 gacaagcattactcttgtggcccttctcaccacaagaaaaacagacaatctctgtaggagcatccttcttcttaggccgtctaccttcgaccatcctctg 23039991  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | ||||| || ||||||||| ||||||| || |||||||||| |||||||||||||| ||||||||||||    
T  23039990 tttgcccttatcagcaggggcactgtaaggcttagggagactctgctgacccttagtcttccgctcattcacaatcttgtaatgagc 23039904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 22733287 - 22733101
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| | ||| ||  ||| || | |||| ||||||| ||||||||| |||| || |||||||| ||||     
T  22733287 gacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatttctggaggagcatccttcttcttaggctgtctatcttcgaccattctctc 22733188  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | ||||| ||  |||||||||||||||| || |||||||||| |||||||||||||| ||||||||||||    
T  22733187 tttgcccttatcagcaggggcactgtaaagcttagggcgactctgctgacccttagtcttccgctcattcacaatcttgtaatgagc 22733101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 224
Target Start/End: Original strand, 20320956 - 20321096
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    ||||||||||| | |||| || ||||| |||||||| || ||||||||  ||||||| |||||||||||| | |||||||| ||||||||| |||||||     
T  20320956 aatctcagcagaagcatcattcttcttcggccgtctatcttcgaccattatctgttttcccttatcagcaggggcactataaggcttagggtgactctgc 20321055  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    || |||||||||| |||||||||||| | ||||||||||||    
T  20321056 tgacccttagtcttccgctcattcacgatcttgtaatgagc 20321096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10871743 - 10871963
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   || ||| ||||   |||    
T  10871743 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaagctctgcag---cat 10871839  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| ||||||||||| ||||||  || ||     
T  10871840 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgttgtcccttacccttcct 10871939  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  10871940 ctcattcactaccttgtagtgagc 10871963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 24874300 - 24874122
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| | ||| ||| | || |||||||| |||||||||||| | ||||| |||||| |   |||||||| |   ||||    
T  24874300 ttcttgccacaccggacacatttcttaatttcttcatggcagacattgcttttgtggcctttcccaccacagttgaaacacacaatctcagta---acat 24874204  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctg 182  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||| | ||||| || |||||||  ||||||||    
T  24874203 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcaggggcactgtacggcttagaacgactctg 24874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17001893 - 17002113
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| ||||||||||||||||||||||||||  |   |||||| ||||   |||    
T  17001893 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcgccacaattgaagcacacaatctctgcag---cat 17001989  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   || ||     
T  17001990 ccttcttcttaggccgcctaacatcgaccatcttctgttttcctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 17002089  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  17002090 ttcattcactaccttgtagtgagc 17002113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 24265263 - 24265483
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  24265263 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 24265359  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||| ||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   ||  |     
T  24265360 ccttcttcttaggccgcctaacatcgaccatcttctatttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttct 24265459  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  24265460 ctcattcactaccttgtagtgagc 24265483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11351261 - 11351158
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || ||||||||||| ||| ||||   ||||||||||||| |||||||||||||| |||||||||||| ||  |||||| |||||| |||    
T  11351261 ttcttgccacaccagaaacatttctctacctcctttggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcat 11351162  T
Q  101 cctt 104  Q
    ||||    
T  11351161 cctt 11351158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 23205207 - 23205354
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| | ||| ||||||||| |  || ||| |||||||||| || |||||||||||||||||||| |||||| |   |||||| | |||| |||    
T  23205207 ttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttat 148  Q
     ||| ||||||||||| || || |||||||| ||||| ||||||||||    
T  23205307 tcttcttcttaggccgcctatcatcgaccattctctggttgcccttat 23205354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 23676811 - 23676958
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| | ||| ||||||||| |  || ||| |||||||||| || |||||||||||||||||||| |||||| |   |||||| | |||| |||    
T  23676811 ttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttat 148  Q
     ||| ||||||||||| || || |||||||| ||||| ||||||||||    
T  23676911 tcttcttcttaggccgcctatcatcgaccattctctggttgcccttat 23676958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 9338475 - 9338695
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  9338475 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 9338571  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  9338572 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 9338671  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  9338672 ctcattcactaccttgtagtgagc 9338695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 9487109 - 9487329
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  9487109 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 9487205  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  9487206 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 9487305  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  9487306 ctcattcactaccttgtagtgagc 9487329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22322892 - 22322672
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  22322892 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctccgcag---cat 22322796  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  22322795 ccttcttcttaggccgcctaacatcgaccatcttctgtttacctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 22322696  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  22322695 ttcattcactaccttgtagtgagc 22322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 44383120 - 44382900
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | ||  ||||||| |||||||||||||| |||||||||||  |   |||||| |||   ||||    
T  44383120 ttcttaccacaccggacacacttcttgatttcctcagggcaggcattgctcttgtggcctttctcaccacaattgaagcacacaatctctgca---acat 44383024  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| ||||| |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  44383023 ccttcttcttaggccgcctaacatcgaccatcttctgtttccccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 44382924  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  44382923 ctcattcactaccttgtagtgagc 44382900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 24712927 - 24713114
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  24712927 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 24713023  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||    
T  24713024 ccttcttcttaggccgcctaacatcgaccatcttctgtttacctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 24713114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 23065357 - 23065451
Alignment:
Q  52 ttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgccctt 146  Q
    |||||||| ||||| ||| || | ||||||  |||||| |||||| ||||||| ||||||||||| || || |||||||| ||||||||||||||    
T  23065357 ttgtggcccttctcaccataagtaaaatagacaatctctgcaggaccatccttcttcttaggccgcctatcttcgaccattctctgtttgccctt 23065451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 23074807 - 23074901
Alignment:
Q  52 ttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgccctt 146  Q
    |||||||| ||||| ||| || | ||||||  |||||| |||||| ||||||| ||||||||||| || || |||||||| ||||||||||||||    
T  23074807 ttgtggcccttctcaccataagtaaaatagacaatctctgcaggaccatccttcttcttaggccgcctatcttcgaccattctctgtttgccctt 23074901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16984133 - 16984353
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  16984133 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 16984229  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
     ||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  16984230 tcttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 16984329  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  16984330 ttcattcactaccttgtagtgagc 16984353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 27374162 - 27374340
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  27374162 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 27374258  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctg 182  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| ||||||||    
T  27374259 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctg 27374340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 23029819 - 23029877
Alignment:
Q  166 ggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||| ||||||||||| ||| | |||| |||||||||||||| ||||||||||||    
T  23029819 ggcttaggacgactctgttgtcccctggtcttccgctcattcacaatcttgtaatgagc 23029877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 1105 - 882
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| |||||||||||||||||| |||||  |||||||| |||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  1105 ttcttgccacaccggaaacatttctttacctcctctggacaaacaatgctcttgcggcctttctcgccacaattgaaacaggtaatctcagtaggaacat 1006  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||||||||||||||| |||||||||||| ||| |||||||||| | ||||||||||||||||||| |||||||||||||||||||| |||    
T  1005 ccttcttcttaggccgtctttcctctaccatcctctgtgtgcgcttatcagcaggggcactatagggcttagggcaactctgttggcccttagtcttccg 906  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  905 ctcattcacaaccttgtaatgagc 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 27559124 - 27558900
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||| ||||| || |||||| |||||||| | || |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  27559124 ttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagcaggaacat 27559025  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
     ||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||    
T  27559024 gctttttcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttccg 27558925  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  27558924 ctcattaacaaccttgtaatgagct 27558900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 21764958 - 21765165
Alignment:
Q  21 tttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctt 120  Q
    ||||||||| |||||  ||||||||||||| |||||||||||||| |||||||||||| ||  |||||| |||||| ||||||| ||||||||||| ||     
T  21764958 tttctttacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggccgccta 21765057  T
Q  121 tcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaat 220  Q
    || |||||||| ||||  ||||||||||||||| | |||||||||||||||||||||||||| ||||||| ||| | || ||||||||||||||||||||    
T  21765058 tcatcgaccattctctaattgcccttatcagcaggggcactatagggcttagggcgactctgctggccctcagtgttccactcattcacaaccttgtaat 21765157  T
Q  221 gagctttg 228  Q
    ||||||||    
T  21765158 gagctttg 21765165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 25756770 - 25756546
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||| | ||||| |||||||||||  || ||  || |||||||||  |||||||||||||| |||||||| ||| ||  |||||| |||||| |||    
T  25756770 ttcttgccgcaccggacacatttctttatctcttctggaaaaacattgcacttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcat 25756671  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||||| |||    
T  25756670 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcaactagggcactatagggcttagggcgactctgctggcccttagtcttccg 25756571  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
     ||||| || |||||||||||||||    
T  25756570 gtcattaaccaccttgtaatgagct 25756546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 22437007 - 22437218
Alignment:
Q  13 cggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttag 112  Q
    ||||||||| ||||||| ||  |  ||||| ||||||| |||||||||||||| |||||||| ||  ||  ||||||||||||||||||||| |||||||    
T  22437007 cggaaacatctctttacctcacccggacaagcattgctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttag 22437106  T
Q  113 gccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaac 212  Q
    |||| || || ||||||||||||| |||| ||||||||||| | || ||||| ||||||||||||||||| |||||||||||||  |||||||||||||     
T  22437107 gccgcctatcatcgaccatcctctatttggccttatcagcaggggcgctataaggcttagggcgactctgctggcccttagtctttcgctcattcacaat 22437206  T
Q  213 cttgtaatgagc 224  Q
    ||||||||||||    
T  22437207 cttgtaatgagc 22437218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 88 - 224
Target Start/End: Original strand, 19867869 - 19868005
Alignment:
Q  88 tcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggc 187  Q
    |||||||||||||| || ||| | |||||||| || |||||||| ||||||||||||||||||||| | || ||||| ||||||||||||||||| ||||    
T  19867869 tcagcaggaacatctttcttcctcggccgtctatcttcgaccattctctgtttgcccttatcagcaggggctctataaggcttagggcgactctgctggc 19867968  T
Q  188 ccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||||||| || ||||||||| ||||||||||||||    
T  19867969 ccttagtctgccactcattcacgaccttgtaatgagc 19868005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 5836383 - 5836159
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||  ||||||||||||| | |||||||||| | ||||| |||||| |   |||||||||||   |||    
T  5836383 ttcttgccacaccggacacatttcttgatctcttctggacaaacattgctttcgtggcctttcccaccacagttgaaacacacaatctcagcag---cat 5836287  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| || || || || ||||||||||||||||| || ||||||||| | |||||||| |||||||| ||||||||||| |||||   || |||    
T  5836286 ccttcttcttgggtcgcctatcatcgaccatcctctgtttccctttatcagcaggggcactatacggcttaggacgactctgttgtcccttgcccttccg 5836187  T
Q  201 ctcattcacaaccttgtaatgagctttg 228  Q
    ||||||||||  |||||| |||||||||    
T  5836186 ctcattcacagtcttgtagtgagctttg 5836159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 24292937 - 24292717
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | ||  | ||||| ||||||||||||||||||||||||||| |   |||||| ||||   |||    
T  24292937 ttcttgccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcgccacaattgaaacacacaatctctgcag---cat 24292841  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  ||||||||||| ||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  24292840 ccttcttcttaggccgcctaacctcgaccatcttctgtttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 24292741  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  24292740 ttcattcactaccttgtagtgagc 24292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 25115678 - 25115865
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||||||| | || |||||||| |||||||||||| | |||||||||||| |   |||||||| ||   |||    
T  25115678 ttcttgccacaccgaacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---cat 25115774  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||| | || || |||||||| |||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||    
T  25115775 ccttcttcttaggctgcctatcatcgaccattctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 25115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 18405062 - 18404947
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| ||||| ||  |||||  |||||| ||||||| || |||||||| || || |||||||| |||||    
T  18405062 gacaagcattactcttgtggcctttctcaccacaagtgaaacagacaatctttgcaggagcatccttcttgttaggccgcctatcttcgaccattctctg 18404963  T
Q  138 tttgcccttatcagca 153  Q
    ||||||||||||||||    
T  18404962 tttgcccttatcagca 18404947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 2871957 - 2871737
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||| | |||||||||||| |   |||||| | ||   |||    
T  2871957 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttcccaccacaattgaaacacacaatctctgtag---cat 2871861  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| ||  ||||||| ||||||||||| |||||   || ||     
T  2871860 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacagcttaggacgactctgttgtcccttgcccttcct 2871761  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| | |||||| |||||    
T  2871760 ctcattcactatcttgtagtgagc 2871737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27205748 - 27205968
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | ||  | ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  27205748 ttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 27205844  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| | ||||| || ||||| ||  ||||||| || |||||||| |||||||| || ||||||  || ||     
T  27205845 ccttcttcttaggccgcctaacatcgaccatcttttgtttccctttatcggcgggagcactgtacggcttaggacgactctgctgtcccttacccttcct 27205944  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  27205945 ctcattcactaccttgtagtgagc 27205968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 27243480 - 27243260
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | ||  | ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  27243480 ttcttaccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 27243384  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| | ||||| || ||||| ||  ||||||| || |||||||| |||||||| || ||||||  || ||     
T  27243383 ccttcttcttaggccgcctaacatcgaccatcttttgtttccctttatcggcgggagcactgtacggcttaggacgactctgctgtcccttacccttcct 27243284  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  27243283 ctcattcactaccttgtagtgagc 27243260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 22829541 - 22829354
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || || ||| ||||| |  || ||| |||| |||||||| |||||||||||  | |||||||||||| |   |||||||| ||   |||    
T  22829541 ttcttgccacaccagacacacttcttgatctcttcaggacagacattgcttttgtggccttttccaccacaattgaaacacacaatctcagtag---cat 22829445  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || |||||||| |||| ||| || ||||||||| | ||||| || |||||||| ||||||||||| |||||    
T  22829444 ccttcttcttaggccgcctatcatcgaccattctctatttccctttatcagcaggggcactgtacggcttaggacgactctgttgtccctt 22829354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 29589594 - 29589374
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  29589594 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 29589498  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || ||||   | ||||| || |||||||| |||||||| || |||||   || ||     
T  29589497 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagtgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 29589398  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  29589397 ctcattcactaccttgtagtgagc 29589374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16575016 - 16575236
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  16575016 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 16575112  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  16575113 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 16575212  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  16575213 ttcattcactaccttgtagtgagc 16575236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16620364 - 16620144
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  16620364 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 16620268  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  16620267 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 16620168  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  16620167 ttcattcactaccttgtagtgagc 16620144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 28312801 - 28312976
Alignment:
Q  46 ttgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgccct 145  Q
    ||||| |||||||||||||| |||||||||||  |   |||||| ||||   ||||||| ||||||||||| ||  | ||||||||| ||||||| || |    
T  28312801 ttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---catccttcttcttaggccgcctaacatcgaccatcttctgtttacctt 28312897  T
Q  146 tatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    | |||||  | ||||| || |||||||| |||||||| || ||||||  || ||  |||||||| |||||||| |||||    
T  28312898 tgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacccttcctttcattcactaccttgtagtgagc 28312976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 21567005 - 21566920
Alignment:
Q  142 cccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagcttt 227  Q
    ||||| |||||| | ||||| || |||||||| ||||||||||| |||||| ||  ||||||| |||  |||||||||||||||||    
T  21567005 cccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttactcctccgctcactcatcaccttgtaatgagcttt 21566920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 24515438 - 24515379
Alignment:
Q  132 cctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    ||||||||| ||||| |||||| |||||||||| || ||||| ||||||||||| |||||    
T  24515438 cctctgttttcccttgtcagcaggagcactatatggtttaggacgactctgttgtccctt 24515379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 34642599 - 34642550
Alignment:
Q  142 cccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||||| ||||| |||||||||| |||||||| ||||||||||| |||||    
T  34642599 cccttaccagcaggagcactatacggcttaggacgactctgttgtccctt 34642550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28941 - 28717
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| |||||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  28941 ttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctcgccacaattgaaacaggtaatcttagcaggaacat 28842  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||||||| || | |||||||| |||||||||| || ||| ||||||||||||| | |    
T  28841 ccttcttcttaggccgtctctcctcgaccattctctgtttgcccttatcaacaggggcactatatggcttagggcaacactgctggcccttagtcttctg 28742  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  28741 ctcattaacaaccttgtaatgagct 28717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 3155 - 3379
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||| ||||  || |||||| ||||| || | || |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  3155 ttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtggcctttctcaccacaattgaaagaagtaatctcagcaggaacat 3254  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |||    
T  3255 cctttttcttaggccgtctctcctcgaccatcctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgctggcccttagtcttccg 3354  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  3355 ctcattaacaaccttgtaatgagct 3379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 17079 - 16855
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || |||||||||||| || |||||  |||||||| |||| |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  17079 ttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaagtaatctcagcaggaacat 16980  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||| ||| | ||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |||||| ||||||||||||| |||    
T  16979 cctttttcttaggtcgtttctcctcgaccatcctctgtttgcccttatcagcaggggcactatatggcttagggctactctgctggcccttagtcttccg 16880  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  16879 ctcattaacaaccttgtaatgagct 16855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 194798 - 194662
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    |||||||||||| |||||||||||||||||||| || || |||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||     
T  194798 aatctcagcagggacatccttattcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgc 194699  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaat 220  Q
    ||||||||||||| ||| ||||| |||| ||||||||    
T  194698 tggcccttagtcttccgttcatttacaatcttgtaat 194662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 21425 - 21377
Alignment:
Q  177 actctgttggcccttagtctaccgctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  21425 actctgctggcccttagtcttccgctcattaacaaccttgtaatgagct 21377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 4e-71; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 23461165 - 23461392
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||||||||| || |||||  ||||||||||||| |||||||||||||| |||||||||||||||  ||| || |||||| |||    
T  23461165 ttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatttccgcaggagcat 23461264  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||| ||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||    
T  23461265 ccttcttcttaggccgcctatcatcgaccattctctattttcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttccg 23461364  T
Q  201 ctcattcacaaccttgtaatgagctttg 228  Q
    ||||||||||||||||||||||||||||    
T  23461365 ctcattcacaaccttgtaatgagctttg 23461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 21883006 - 21883192
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| ||||||||||||||||||||||| ||| ||  ||||||||||| |||||| || ||| | |||||||| ||||||||||| |||||    
T  21883006 gacaagcattgctcttgtggcctttctcgccacaattaaaacagacaatctcagcagaaacatctttcttcctcggccgtctatcctcgaccattctctg 21883105  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21883106 tttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttccgctcattcacaaccttgtaatgagc 21883192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20803791 - 20804014
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || |||||||||||| || |||||| | |||||||| || |||||||||||||| ||| |||||||| ||  |||||| |||||| |||    
T  20803791 ttcttgccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttctcaccataattgaaacagacaatctccgcaggagcat 20803890  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||| |||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||| | |    
T  20803891 ccttcttcttaggccgcctatcatcgaccattctctatttgcccttatcagcaggggcactatagggcttagggagactttgttggcccttagtcttctg 20803990  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||| ||||||||||||||||||    
T  20803991 ctcatccacaaccttgtaatgagc 20804014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 23526282 - 23526468
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||||| ||| ||  ||||||||||||| ||||||| ||| | |||||||| ||||||||||||||||     
T  23526282 gacaagcattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatccttcttccttggccgtctatcctcgaccatcctcta 23526381  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||| ||||||||||||    
T  23526382 tttgcccttgtcagcaagagcactatagggcttagtgcgactctgctggcccttagtcttccactcattcacaatcttgtaatgagc 23526468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 18782308 - 18782527
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| |||||| || |  || ||| |||||||||| || |||||||||||||||||||| |||||| |   |||||| |||||| |||    
T  18782308 ttcttgccacaccggacacattttttgatctcttcaggacaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcat 18782407  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||| ||  || || |||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| |||| |||    
T  18782408 ccttcttcttagaccacctatcatcgaccattctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgttggcccttggtcttccg 18782507  T
Q  201 ctcattcacaaccttgtaat 220  Q
    ||||||||||||||||||||    
T  18782508 ctcattcacaaccttgtaat 18782527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 98 - 224
Target Start/End: Complemental strand, 23537310 - 23537184
Alignment:
Q  98 catccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtcta 197  Q
    ||||||| ||||||||||| || || |||||||| ||||||||||||||||||| | | |||||||||||| ||||||||||||| |||||||||||||     
T  23537310 catccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcaggaggggcactatagggcatagggcgactctgctggcccttagtctt 23537211  T
Q  198 ccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||||||||||||||    
T  23537210 ccgctcattcacaaccttgtaatgagc 23537184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 25429651 - 25429837
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||| | ||| ||  |||||| ||||||  |||||| ||||||||||| || || || ||||||||||     
T  25429651 gacaagcattgctcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagtatccttcttcttaggccgcctatcttcaaccatcctcta 25429750  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||||||||| |||| | ||||| || |||||| |||||||||| || |||||||||| |||||||||||||| ||||||||||||    
T  25429751 tttgcccttattagcaggggcactgtaaggcttaaggcgactctgctgacccttagtcttccgctcattcacaatcttgtaatgagc 25429837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22330079 - 22329859
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  22330079 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 22329983  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   || ||     
T  22329982 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 22329883  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  22329882 ctcattcactaccttgtagtgagc 22329859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 19773154 - 19773374
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  19773154 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 19773250  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  19773251 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 19773350  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  19773351 ctcattcactaccttgtagtgagc 19773374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27521600 - 27521820
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  27521600 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 27521696  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||| ||| ||  | ||||||||| ||||||| || || |||||| | ||||| || |||||||| |||||||| || ||||||  || ||     
T  27521697 ccttcttcttagaccgcctaacatcgaccatcttctgtttccctttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcct 27521796  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  27521797 ctcattcactaccttgtagtgagc 27521820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37288688 - 37288468
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||| ||| | || || ||||| |||||||||||| | |||||||||||| |   |||||| | ||   |||    
T  37288688 ttcttgccacaccggacacacttcttgatttcttcagggcagacgttgcttttgtggcctttcccaccacaattgaaacacacaatctctgtag---cat 37288592  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||  ||||||| || |||||||| |||||||| || |||||   || ||     
T  37288591 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcgggagcactgtacggcttaggacgactctgctgtcccttgcccttcct 37288492  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  37288491 ctcattcactaccttgtagtgagc 37288468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22137862 - 22138049
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || |||||||| |||||||||||| | |||||||||||| |   |||||||  ||   |||    
T  22137862 ttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccacaattgaaacacacaatctcaatag---cat 22137958  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || |||||||| |||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||    
T  22137959 ccttcttcttaggccgcctatcatcgaccattctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 22138049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27613550 - 27613770
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||| ||| | || |||||||| |||||||| ||||| |||||||||||| |   |||||| ||||   |||    
T  27613550 ttcttgccacaccggacacacttcttgatttcttcagggcagacattgctcttgtggcccttctcaccacaattgaaacacacaatctctgcag---cat 27613646  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    || | ||||||||||||||  | ||||||| | ||||||| || ||||||||| | ||||| || |||||||| ||||||||||| |||||   || ||     
T  27613647 ccctcttcttaggccgtctcacatcgaccaccttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgttgtcccttgcccttcct 27613746  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  27613747 ttcattcactaccttgtagtgagc 27613770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 27682592 - 27682372
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  27682592 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 27682496  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||| || ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   ||  |     
T  27682495 ccttcttcttaggacgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttct 27682396  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  27682395 ctcattcactaccttgtagtgagc 27682372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 41774036 - 41774256
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||||||||   |||    
T  41774036 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctcagcag---cat 41774132  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
     ||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  41774133 tcttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 41774232  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  41774233 ttcattcactaccttgtagtgagc 41774256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 16359696 - 16359916
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  16359696 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 16359792  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  16359793 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 16359892  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  16359893 ctcattcactaccttgtagtgagc 16359916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 34569688 - 34569908
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  34569688 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 34569784  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  34569785 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 34569884  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  34569885 ctcattcactaccttgtagtgagc 34569908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 14996931 - 14996744
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  14996931 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 14996835  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| |||||||| || ||  | || |||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||    
T  14996834 ccttcttcttaggtcgcctaacatcaaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 14996744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 224
Target Start/End: Complemental strand, 29473223 - 29473045
Alignment:
Q  43 acattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgc 142  Q
    |||||||| |||||||||||| | |||||||||||| |   |||||| | ||   ||||||| ||||||||||| || || ||||||||||||||||| |    
T  29473223 acattgcttttgtggcctttcccaccacaattgaaacacacaatctctgtag---catccttcttcttaggccgcctatcatcgaccatcctctgtttcc 29473127  T
Q  143 ccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    | ||||||||  |  |||| || |||||||| |||||||| || |||||   || || ||||||||| |||||||| |||||    
T  29473126 ctttatcagcggggacactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagc 29473045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 22351113 - 22351300
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||| ||  | || |||||||| |||||||||||| | ||||| |||||| |   |||||||| ||   |||    
T  22351113 ttcttgccacaccggacacacttcttcatttcttcggggcagacattgcttttgtggcctttcccaccacagttgaaacacacaatctcagtag---cat 22351209  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||| ||||||| || ||||||||| | ||||| || |||||| | |||||||| || |||||    
T  22351210 ccttcttcttaggccgcctatcatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttatgacgactctgctgcccctt 22351300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 21631456 - 21631365
Alignment:
Q  136 tgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagcttt 227  Q
    ||||| |||||||||||| ||||||| || ||||| || ||||| || || | | ||  || || |||||||||||||||||||||||||||    
T  21631456 tgtttacccttatcagcaggagcactgtaaggctttggacgactttgctgactcctacccttcctctcattcacaaccttgtaatgagcttt 21631365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 79 - 306
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| |||| |||||| || |||||| ||||||||||||| |||||||||||||| |||||||||||| ||  |||||| |||||| |||    
T  79 ttcttgccacgccgaaaacttttcttcacctcctcaggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcat 178  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||  |||||||||||| |||    
T  179 ccttcttcttaggccgcctatcatcgaccattctctgttttcccttatcagcaggggcactatagggcttagggcgactctgccggcccttagtcttccg 278  T
Q  201 ctcattcacaaccttgtaatgagctttg 228  Q
    ||||||||||||||||||||||||||||    
T  279 ctcattcacaaccttgtaatgagctttg 306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 36789 - 37016
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||||||||| || |||||  ||||||||||||| |||||||||||||| |||||||||||| ||   ||||| |||||| |||    
T  36789 ttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaacagacgatctccgcaggagcat 36888  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||||| |||    
T  36889 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttagggagactctgctggcccttagtcttccg 36988  T
Q  201 ctcattcacaaccttgtaatgagctttg 228  Q
    |||||| |||||||||||||||||||||    
T  36989 ctcatttacaaccttgtaatgagctttg 37016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 11984243 - 11984466
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || |||  |||||||||||| |||||||||||||| |||||||||||| | ||||||||||| ||| |||    
T  11984243 ttcttgccacaccggacacatttcttgatctcttcagtacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcat 11984342  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||||||||| || |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||| |||    
T  11984343 ccttcttcttaggccgtctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttggtcttccg 11984442  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  11984443 ctcattcacaaccttgtaatgagc 11984466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 9591615 - 9591839
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||| ||||||||||||| |||||||||||||||||||| |||||| ||  |||||| |||||| |||    
T  9591615 ttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcat 9591714  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || || ||||| ||||| |||||||||||| || | |||||||| ||||||||||||||||| |||||||| |||| ||     
T  9591715 ccttcttcttaggccgcctatcatcaaccattctctgcttgcccttatcaacaggggcactataaggcttagggcgactctgctggcccttggtcttcct 9591814  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  9591815 ctcattaacaaccttgtaatgagct 9591839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 17703471 - 17703250
Alignment:
Q  4 ttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatcct 103  Q
    |||||||  |||| ||||||||| |  || ||| |||||||||| || |||||||||||| ||||||| |||||| |   ||| || |||||| ||||||    
T  17703471 ttgccacatcggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatcct 17703372  T
Q  104 tattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctc 203  Q
    | ||||| ||||| || || |||||||| ||||||||||||||||||| | | |||||||| || |||||||||||||| |||||||| |||| ||||||    
T  17703371 tcttctttggccgcctatcatcgaccattctctgtttgcccttatcagtaggggcactataaggtttagggcgactctgctggcccttggtcttccgctc 17703272  T
Q  204 attcacaaccttgtaatgagct 225  Q
    ||||||||||||||||||||||    
T  17703271 attcacaaccttgtaatgagct 17703250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 16726457 - 16726236
Alignment:
Q  4 ttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatcct 103  Q
    |||||||  |||| ||||||||| |  || ||| |||||||||| || |||||||||||| ||||||| |||||| |   ||| || |||||| ||||||    
T  16726457 ttgccacatcggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatcct 16726358  T
Q  104 tattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctc 203  Q
    | ||||| ||||| || || |||||||| ||||||||||||||||||| | | ||||| || || |||||||||||||| |||||||| ||||  |||||    
T  16726357 tcttctttggccgcctatcatcgaccattctctgtttgcccttatcagtaggggcactttaaggtttagggcgactctgctggcccttggtctttcgctc 16726258  T
Q  204 attcacaaccttgtaatgagct 225  Q
    ||||||||||||||||||||||    
T  16726257 attcacaaccttgtaatgagct 16726236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18180994 - 18181214
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || |||||||| | ||||||||||||||||||||||||| |   |||||| ||||   |||    
T  18180994 ttcttgccacaccggacacacttcttgatttcctcagggcagacattgctttcgtggcctttctcgccacaattgaaacacacaatctctgcag---cat 18181090  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  ||||||||||| ||||||| || ||||||||  | ||||| || ||||||||  |||||||||| ||||||  || ||     
T  18181091 ccttcttcttaggccgcctaacctcgaccatcttctgtttccctttatcagcgggggcactgtacggcttaggaagactctgttgtcccttacccttcct 18181190  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  18181191 ctcattcactaccttgtagtgagc 18181214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 223
Target Start/End: Complemental strand, 15145890 - 15145720
Alignment:
Q  53 tgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagc 152  Q
    ||||||||||||| |||||| | ||  ||  ||||||||||||| ||||||| |||||||| || || || || || |  ||||||||||||||||||||    
T  15145890 tgtggcctttctcaccacaagtaaagaagacaatctcagcaggagcatccttcttcttagggcgcctatcatcaactactctctgtttgcccttatcagc 15145791  T
Q  153 aagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    | | | |||||| |||||||| ||||||||||| ||||| | ||  ||||||||||||| |||||||||||    
T  15145790 agggggactataaggcttaggacgactctgttgacccttggcctttcgctcattcacaatcttgtaatgag 15145720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15158076 - 15157856
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  15158076 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 15157980  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   ||  |     
T  15157979 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgccctttct 15157880  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  15157879 ctcattcactaccttgtagtgagc 15157856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 11550121 - 11549934
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || || ||| ||||| |  || ||| |||| |||||||| |||||||||||| | |||||||||||| |   |||||| | ||   |||    
T  11550121 ttcttgccacaccagacacacttcttgatctcttcaggacagacattgcttttgtggcctttcacaccacaattgaaacacacaatctcggtag---cat 11550025  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||| | ||||| || |||||||| ||||||||||| |||||    
T  11550024 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgttgtccctt 11549934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 13689292 - 13689512
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  13689292 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 13689388  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||| | | ||||| || |||||||| |||||||| || |||||   ||  |     
T  13689389 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagtaggggcactgtacggcttaggacgactctggtgtcccttgccctttct 13689488  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  13689489 ctcattcactaccttgtagtgagc 13689512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 12690752 - 12690939
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| |  || ||| |||| |||||||| |||||| ||||| | |||||||||||| |   |||||| | ||   |||    
T  12690752 ttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtggactttcacaccacaattgaaacacacaatctcggtag---cat 12690848  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||    
T  12690849 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 12690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 11234232 - 11234012
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||| ||| | || || ||||| |||||||||||| | |||||||||||| |   |||||| | ||   |||    
T  11234232 ttcttgccacaccgaacacacttcttgatttcttcagggcagacgttgcttttgtggcctttcccaccacaattgaaacacacaatctctgtag---cat 11234136  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  11234135 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 11234036  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  11234035 ctcattcactaccttgtagtgagc 11234012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 44788370 - 44788150
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| ||||||||||||||||||||||||||  |   |||||| ||||   |||    
T  44788370 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcgccacaattgaagcacacaatctctgcag---cat 44788274  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||| | | ||||| || |||||||| |||||||| || |||||   || ||     
T  44788273 ccttcttcttaggccgcctaacatcgaccatcttctgttttcctttatcagtaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 44788174  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  44788173 ttcattcactaccttgtagtgagc 44788150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 14957759 - 14957933
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| |  || ||| |||| |||||||| |||||||||||| | |||||||||||| |   |||||| | || |   |    
T  14957759 ttcttgccacaccggacacacttcttgatctcttcaggacagacattgcttttgtggcctttcacaccacaattgaaacacacaatctcggtagta---t 14957855  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgac 178  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||| | ||||| || |||||||| ||||    
T  14957856 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcaggggcactgtacggcttaggacgac 14957933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 8710856 - 8711076
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  8710856 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 8710952  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  8710953 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 8711052  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  8711053 ttcattcactaccttgtagtgagc 8711076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 14043072 - 14043169
Alignment:
Q  127 accatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||| |||||||| |||||||||||| |||||||||| ||||| || | ||||||||| || ||    | |||||||||||||| ||||||||||||    
T  14043072 accattctctgtttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgtaatgagc 14043169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 14353102 - 14353199
Alignment:
Q  127 accatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||| |||||||| |||||||||||| |||||||||| ||||| || | ||||||||| || ||    | |||||||||||||| ||||||||||||    
T  14353102 accattctctgtttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgtaatgagc 14353199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 15627910 - 15628001
Alignment:
Q  136 tgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagcttt 227  Q
    ||||| |||||||||||| ||||||| || ||||| || ||||| ||||| | |||| | | || |||||||| ||||||||||||||||||    
T  15627910 tgtttacccttatcagcaggagcactgtaaggctttggacgactttgttgactcttacttttcctctcattcataaccttgtaatgagcttt 15628001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14335647 - 14335867
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  14335647 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 14335743  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||| | || |||||||| |||||||| || |||||   || ||     
T  14335744 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcattgtacggcttaggacgactctgctgtcccttgcccttcct 14335843  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  14335844 ttcattcactaccttgtagtgagc 14335867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 14283239 - 14283145
Alignment:
Q  133 ctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagcttt 227  Q
    ||||| || |||||||||||| | |||||||| ||||| ||||||||||| || |||||| ||   | |||| |||  |||||||||||||||||    
T  14283239 ctctgcttacccttatcagcaggggcactatacggcttcgggcgactctgctgtcccttattccttctctcactcatcaccttgtaatgagcttt 14283145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 18587190 - 18586970
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||  |   |||||| | ||   |||    
T  18587190 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgtag---cat 18587094  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||| | || |||||||| |||||||| || |||||   || ||     
T  18587093 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcattgtacggcttaggacgactctgctgtcccttgcccttcct 18586994  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  18586993 ttcattcactaccttgtagtgagc 18586970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 8542 - 8728
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| ||||||||||||||||||||||| ||| || ||||||||||| || | ||||| ||||| |||||||| |||||||||||||||||    
T  8542 gacaagcattgctcttgtggcctttctcgccacaattaaaacagataatctcagcaagagcgtccttcttctttggccgtctatcctcgaccatcctctg 8641  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  8642 tttgcccttatcagcaggggcactatagggcttagggcgactctgttggcccttagtcttccgctcattcacaatcttgtaatgagc 8728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 107685 - 107600
Alignment:
Q  106 ttcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    ||||||||||| || || ||||||||| ||||||| || ||||||||  | ||||| || |||||||| ||||||||||| |||||    
T  107685 ttcttaggccgcctatcatcgaccatcttctgtttccctttatcagcgggggcactgtacggcttaggacgactctgttgtccctt 107600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 124; Significance: 6e-64; HSPs: 5)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 32170 - 32393
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| |||||||||| | ||||| ||  || ||||| ||||||| ||||||||||||||||||||||| ||| ||  ||||||||||||| |||    
T  32170 ttcttaccacaccggaaacatctttttacctctccaggacaagcattgctcttgtggcctttctcgccacaattaaaacagacaatctcagcaggagcat 32269  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| || |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||    
T  32270 ccttcttcttaggccgcctatcatcgaccattctttgtttgcccttatcagcaagggcgctatagggcttagggcgactctgctggcccttagtcttccg 32369  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  32370 ctcattcacaaccttgtaatgagc 32393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 10252 - 10028
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||||||||| |  || ||| |||||||||| || |||||||||||| ||||| | |||||| |   ||| || |||||| |||    
T  10252 ttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcat 10153  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| ||||| || || |||||||| ||||| ||||||||||||||||| |||||||| || |||||||||||||| || ||||| ||||||      
T  10152 ccttcttctttggccgcctatcatcgaccattctctgcttgcccttatcagcaagggcactataaggtttagggcgactctgctgacccttggtctactt 10053  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| |||| |||||||||||||    
T  10052 ctcattaacaatcttgtaatgagct 10028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 12907 - 12683
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||||||||| |  || ||| |||||||||| || |||||||||||| ||||| | |||||| |   ||| || |||||| |||    
T  12907 ttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccatagttgaaacaaacaatatccgcaggagcat 12808  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| ||||| || || |||||||| ||||| ||||||||||||||||| |||||||| || |||||||||||||| || ||||| ||||||      
T  12807 ccttcttctttggccgcctatcatcgaccattctctgcttgcccttatcagcaagggcactataaggtttagggcgactctgctgacccttggtctactt 12708  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| |||| |||||||||||||    
T  12707 ctcattaacaatcttgtaatgagct 12683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 84 - 224
Target Start/End: Original strand, 55011 - 55151
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    ||||| ||||||| ||||||| ||||| |||||||| || ||||||||||||||||||| |||||||||| | |||||||| |||||| ||||||| |||    
T  55011 aatcttagcaggagcatccttcttcttcggccgtctatcttcgaccatcctctgtttgctcttatcagcaggggcactataaggcttatggcgactttgt 55110  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||| |||||||| |||||||||||| | ||||||||||||    
T  55111 tggcacttagtcttccgctcattcaccatcttgtaatgagc 55151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37636 - 37709
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaatt 74  Q
    ||||| |||| |||||||||| | ||||| ||  || ||||| ||||||| |||||||||||||||||||||||    
T  37636 ttcttaccacaccggaaacatctttttacctctccaggacaagcattgctcttgtggcctttctcgccacaatt 37709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 24784939 - 24784716
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||  |||||||||||  |||||  ||||||||||||| |||||||||||||| ||| |||||||| ||  |||||| |||||| |||    
T  24784939 ttcttgccacaccgggcacatttctttatctcctctggacaaacattgctcttgtggcctttctcaccataattgaaacagacaatctccgcaggagcat 24784840  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||| |||    
T  24784839 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcagaggcactatagggcttagggagactctgttggcccttagtcttccg 24784740  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  24784739 ctcattcacaaccttgtaatgagc 24784716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 21228638 - 21228415
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || || ||||||||| |  ||  ||||||||||||| || |||||||||||||||||||| |||||| |   |||||| |||||| |||    
T  21228638 ttcttgccacacctgacacatttcttgatctctacaagacaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcat 21228539  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||||| | |    
T  21228538 ccttcttcttaggccgcctatcatcgaccattctctgtttacccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttctg 21228439  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  21228438 ctcattcacaaccttgtaatgagc 21228415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 21176681 - 21176867
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||||||||||| |||||| ||||||| |||||||| | | ||  ||||||  ||||| ||||||| ||||||||||| || || |||||||| |||||    
T  21176681 gacaaacattgctcttgtggactttctcaccacaattaatacagacaatctccacaggagcatccttcttcttaggccgcctatcatcgaccattctctg 21176780  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | |||||||| | |||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  21176781 tttgcccttatcagcaggggcactatatgtcttagggctactctgctggcccttagtcttccgctcattcacaaccttgtaatgagc 21176867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 17042097 - 17041874
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||| || ||||||| || |||||||||||| ||||||| |||||| |   |||||| | |||| |||    
T  17042097 ttcttgccacaccggacacatttcttgatctcttcaggataaacattactcttgtggcctttcccgccacagttgaaacaaa-aatctccgaaggagcat 17041999  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| ||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| ||     
T  17041998 ccttcttcttaggccgcctatcatcgaccattctctgcttgcccttatcagcaggggcactataaggcttagggcgactctgctggcccttagtcttcct 17041899  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  17041898 ctcattaacaaccttgtaatgagct 17041874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22435815 - 22435602
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||||||||  ||||||||||||||||| |||||  ||||||||||||| |||||||||||||| |||||||||||||||  |||||  |||||| |||    
T  22435815 ttcttgccacatcggaaacatttctttacctcctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatcttcgcaggagcat 22435716  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| | ||           || | |||||| |||||||| |||||||||| | | |||||||||||||||||||||||||| ||||||||||||| |||    
T  22435715 ccttctccta----------tcattgaccattctctgttttcccttatcagtaggggcactatagggcttagggcgactctgctggcccttagtcttccg 22435626  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  22435625 ctcattcacaaccttgtaatgagc 22435602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 20081421 - 20081235
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||||| ||  ||  |||||||||| |||||||||| ||||||||||| || || |||||||| |||||    
T  20081421 gacaagcattgctcttgtggcctttctcaccacaattaaagcagacaatctcagcatgaacatccttcttcttaggccgcctatcatcgaccattctctg 20081322  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | || ||||| |||||| |||||||||| ||||| ||||||| |||||||||||| | ||||||||||||    
T  20081321 tttgcccttatcagcaggggcgctataaggcttaaggcgactctgctggccgttagtcttccgctcattcacgatcttgtaatgagc 20081235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 22401906 - 22402092
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| | ||| ||  ||| || |||||| ||||||| |||||||| ||||| || |||||||| |||||    
T  22401906 gacaagcattactcttgtggcctttctcaccacaagtaaaacagaaaatttctgcaggagcatccttcttcttaggtcgtctatcttcgaccattctctg 22402005  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | ||||| || ||||||||||||||||| || |||||||||| ||||||||| |||| ||||||||||||    
T  22402006 tttgcccttatcagcaggggcactgtaaggcttagggcgactctgctgacccttagtcttccgctcatttacaatcttgtaatgagc 22402092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 22496301 - 22496115
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||| ||| |||||||||||||| ||| |||| ||  ||  ||||||| ||||||||||||| ||| | |||||||| | ||||||||| |||||    
T  22496301 gacaagcatcgctcttgtggcctttctcaccataattaaagcagacaatctcaacaggaacatccttcttccttggccgtctatactcgaccattctctg 22496202  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||| |||||||||||| | || ||||| ||||||||| ||||||| |||||||| |||| |||||||||||| ||||||||||||||    
T  22496201 ttttcccttatcagcaggggcgctataaggcttagggagactctggtggcccttcgtcttccgctcattcacgaccttgtaatgagc 22496115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 51330574 - 51330354
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| ||||||||| |||| |||||||||||| |   |||||| ||||   |||    
T  51330574 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctctctctccacaattgaaacacacaatctctgcag---cat 51330478  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || ||||||  || ||     
T  51330477 ccttcttcttaggccgcctgacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttacccttcct 51330378  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  51330377 ctcattcactaccttgtagtgagc 51330354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 21842489 - 21842676
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||||||||  |||| ||| ||||| | ||||||| | || |||||||| |||||||||||| | |||||||||||| |   |||||||| ||   |||    
T  21842489 ttcttgccacatcggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---cat 21842585  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| |||||||||||||| || ||||||||| ||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||    
T  21842586 ccttcttcttaggccgtctatcatcgaccatcttctgtttccctttatcagcgggggcactgtacggcttaggacgactctgatgtccctt 21842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21833579 - 21833799
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  21833579 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 21833675  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||| ||| || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  21833676 ccttcttcttaggccgcctaacatcgaccatcttctatttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 21833775  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  21833776 ctcattcactaccttgtagtgagc 21833799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16347677 - 16347457
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | |||||||  |||  | ||||| |||||||||||||| |||||||||||  |   |||||||||||   |||    
T  16347677 ttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctcagcag---cat 16347581  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| ||||| |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  16347580 ccttcttcttaggccgcctaacgtcgaccatcttctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 16347481  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  16347480 ctcattcactaccttgtagtgagc 16347457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 33388111 - 33387891
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||  | ||||| ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  33388111 ttcttgccacaccggacacacttcttgatttcctccgggcaaacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 33388015  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  33388014 ccttcttcttaggccgcctaacatcgaccatcttctgtttacctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 33387915  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  33387914 ttcattcactaccttgtagtgagc 33387891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 16379503 - 16379594
Alignment:
Q  133 ctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||||||||   ||||| || |||||||| ||||||||||| |||||    | |||||||||||||||||||||||||||    
T  16379503 ctctgtttgcccttatcagcagaggcactgtaaggcttaggacgactctgttgacccttgcctttccgctcattcacaaccttgtaatgagc 16379594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 41350750 - 41350536
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | |||||||  |||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  41350750 ttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 41350654  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| ||||| |||||  | ||||| || |||||||| |||||||| || ||||||  || ||     
T  41350653 ccttcttcttaggccgcctaacatcgaccatcttctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacccttcct 41350554  T
Q  201 ctcattcacaaccttgta 218  Q
    ||||||||| ||||||||    
T  41350553 ctcattcactaccttgta 41350536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 191
Target Start/End: Original strand, 19109741 - 19109834
Alignment:
Q  98 catccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    ||||||| ||||||||||| || || || |||||||||||||| || ||||||||| | ||||| || |||||||| ||||||||||| |||||    
T  19109741 catccttcttcttaggccgcctatcatcaaccatcctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgttgtccctt 19109834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 22400597 - 22400775
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| |  || ||| | || ||||| || || ||||||||| | |||||||||||| |   |||||||| ||   |||    
T  22400597 ttcttgccacaccggacacacttcttgatctcttcagggcagacattacttttatggcctttccctccacaattgaaacacacaatctcagtag---cat 22400693  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctg 182  Q
    || | ||||||||||| || || ||||||||||||||||| || ||||||||| | ||||| ||  ||||||| ||||||||    
T  22400694 ccatcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcaggggcactgtacagcttaggacgactctg 22400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 21752456 - 21752546
Alignment:
Q  133 ctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    |||||||| ||||||||||||   ||||| || |||||||| |||||||| || |||||||  |  ||||||||||||| |||||||||||    
T  21752456 ctctgttttcccttatcagcagtggcactgtaaggcttaggacgactctgctgacccttagcttttcgctcattcacaatcttgtaatgag 21752546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 24096569 - 24096506
Alignment:
Q  129 catcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctta 192  Q
    |||||||||||| || || |||||| |||||||||| || ||||| ||||||||||| ||||||    
T  24096569 catcctctgttttcctttgtcagcaggagcactataaggtttaggacgactctgttgtccctta 24096506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 19857713 - 19857773
Alignment:
Q  132 cctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctta 192  Q
    |||||| || ||||| |||||| |||||||||| || ||||| ||||||||||| ||||||    
T  19857713 cctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtccctta 19857773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 14045 - 13821
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || || |||||||||||  || ||  ||||||||||||| |||||||||||||| |||||||| ||| ||  |||||| |||||| |||    
T  14045 ttcttgccacacctgacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgcaggagcat 13946  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |||    
T  13945 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcatcaggggcactatagggcttagggcgactctgttggcccttagtcttccg 13846  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  13845 ctcattaacaaccttgtaatgagct 13821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 432 - 656
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||| | ||| || |||||| ||||| || | || |||||||||||||| |||||||||||| | ||||||||| |||||||||    
T  432 ttcttgccacaccggaaacactccttcacctcctcacgacaagcagtactcttgtggcctttctcaccacaattgaaacaagtaatctcaacaggaacat 531  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| || ||||| |||||||||||||||||||||||||||||| || | | |||||| ||||||||||||||||| ||||||||||||| |||    
T  532 cctttttcttgggtcgtctctcctcgaccatcctctgtttgcccttatcaacaggggaactataaggcttagggcgactctgctggcccttagtcttccg 631  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  632 ctcattaacaaccttgtaatgagct 656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 27 - 254
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||||||||| || ||||   ||||||||||||| |||||||||||||| |||||| ||||| ||  |||||| ||| || |||    
T  27 ttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccacaaatgaaacagacaatctccgcaagagcat 126  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || ||||| || |||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||    
T  127 ccttcttcttaggccgcctatcatcgacaatactctatttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttccg 226  T
Q  201 ctcattcacaaccttgtaatgagctttg 228  Q
    ||||||||||||||||| ||||||||||    
T  227 ctcattcacaaccttgtgatgagctttg 254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 15054 - 14831
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| |||||||||||  || ||  ||||||||||||| |||||||||||||| |||||||| ||| ||  |||||| | |||| |||    
T  15054 ttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcat 14955  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||| | || || |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||    
T  14954 ccttcttcttaggctgcctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttccg 14855  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  14854 ctcattcacaaccttgtaatgagc 14831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 11369 - 11146
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| |||||||||||  || ||  ||||||||||||| |||||||||||||| |||||||| ||| ||  |||||| | |||| |||    
T  11369 ttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccacaattaaaacagacaatctccgtaggagcat 11270  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||| | || || |||||||| ||||||||||||||||||||| | ||||||||||||||||||  ||| |||||||||||||||| |||    
T  11269 ccttcttcttaggctgcctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttagggtaactttgttggcccttagtcttccg 11170  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  11169 ctcattcacaaccttgtaatgagc 11146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 117; Significance: 9e-60; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 17454 - 17674
Alignment:
Q  4 ttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatcct 103  Q
    ||||||| ||||| |||||||||||  || ||  |||||||||| || |||||||||||||| |||||||||||| ||  |||||| |||||| ||||||    
T  17454 ttgccacaccggacacatttctttatctcttctggacaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatcct 17553  T
Q  104 tattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctc 203  Q
    | ||||||||||| || || |||||||| || |||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  17554 tcttcttaggccgcctatcatcgaccattctatgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttccgctc 17653  T
Q  204 attcacaaccttgtaatgagc 224  Q
    |||||||||| ||||||||||    
T  17654 attcacaaccgtgtaatgagc 17674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 3760 - 3935
Alignment:
Q  46 ttgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgccct 145  Q
    ||||| |||||||||||| | |||||||||||| |   |||||| | ||   ||||||| ||||||||||| || || ||||||||||||||||| || |    
T  3760 ttgcttttgtggcctttcccaccacaattgaaacacacaatctctgtag---catccttcttcttaggccgcctatcatcgaccatcctctgtttccctt 3856  T
Q  146 tatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||  | ||||| || |||||||| |||||||| || |||||   || || ||||||||| |||||||| |||||    
T  3857 tatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagc 3935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 493 - 270
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||||||| |   |||||| | |||| |||    
T  493 ttcttgccacaccggacacatttcttgatctcctcaggacaaacattgctcttgtggcctttctcgccacaattgaaacaaacaatctccgtaggagcat 394  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| || |||||||||||||||||| | ||| |||| ||||||||||||||||| |||||||| |||| |||    
T  393 ccttcttcttaggccgcctatcatcgaccattctttgtttgcccttatcagcaggggcaatataaggcttagggcgactctgctggcccttggtcttccg 294  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  293 ctcattcacaaccttgtaatgagc 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 229865 - 229642
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| |||||||||||  || ||  ||||||||||||| |||||||||||||| |||||||||||| |   |||||| |||||| |||    
T  229865 ttcttgccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcat 229766  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| || |||||||| || || |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| ||     
T  229765 ccttcttattaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgctggtccttagtcttcct 229666  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  229665 ctcattcacaaccttgtaatgagc 229642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 21163946 - 21163760
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||| |||||||||||||||| ||| ||  ||||||||||||| ||||||| ||| | || ||||| |||||||||||||||||    
T  21163946 gacaagcattgctcttgtggtctttctcgccacaattaaaacagacaatctcagcaggagcatccttcttccttggtcgtctatcctcgaccatcctctg 21163847  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  21163846 tttgcccttatcagcaggggcactatagggcttagggcgactttgttggcccttagtcttccgctcattcacaatcttgtaatgagc 21163760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 22043155 - 22043378
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||||||||| |  || ||  |||||||||| || |||||||||||||| |||||||||||| | ||||||||||  ||| |||    
T  22043155 ttcttgccacaccgaacacatttcttgatctcttctggacaaacattactcttgtggcctttctcaccacaattgaaacaagtaatctcagttggagcat 22043254  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| |||||||||||||| |||| | | |||||||| ||||||||| ||||||| |||||||| |||| |||    
T  22043255 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttgtcagtaggggcactataaggcttagggtgactctgctggcccttggtcttccg 22043354  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  22043355 ctcattcacaaccttgtaatgagc 22043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 30310597 - 30310374
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || || ||||||||| |  || ||| |||||||||| || |||||||||||||||||||| |||||| |   ||| || |||||| |||    
T  30310597 ttcttgccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcat 30310498  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| ||||| || || |||||||| ||||||||||||||||||||| | |||||||| || |||||||||||||| || ||||| |||| |||    
T  30310497 ccttcttctttggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactataaggtttagggcgactctgctgacccttggtcttccg 30310398  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  30310397 ctcattcacaaccttgtaatgagc 30310374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 224
Target Start/End: Original strand, 15536714 - 15536934
Alignment:
Q  4 ttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatcct 103  Q
    ||||||| ||||| ||||||||| |  || | | |||||||||| || ||||||||||  ||||||||||| ||| |  ||||||| | |||| ||||||    
T  15536714 ttgccacaccggacacatttcttgatctctttaggacaaacattactcttgtggccttcttcgccacaattaaaacaaataatctccgaaggagcatcct 15536813  T
Q  104 tattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctc 203  Q
    | ||||||||||| || || |||||||| ||||| ||||||||||| ||| | |||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  15536814 tcttcttaggccgcctatcatcgaccattctctgcttgcccttatcggcaggggcactataaggcttagggcgactctgctggcccttggtcttccgctc 15536913  T
Q  204 attcacaaccttgtaatgagc 224  Q
    |||||||||||||||||||||    
T  15536914 attcacaaccttgtaatgagc 15536934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 32603473 - 32603697
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || |||||||||||||| || |||||||||||| | ||||| |||||| |   ||| || | |||| |||    
T  32603473 ttcttgccacaccggacacatttcttgatctcttcaagacaaacattactcttgtggcctttcccaccacagttgaaacaaacaatttccgaaggagcat 32603572  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||| || || || |||||||| ||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| ||     
T  32603573 ccttcttcttaggtcgcctatcatcgaccattctctgcttgcccttatcagcaggggcactataaggcttagggcgactctgctggcccttagtcttcct 32603672  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  32603673 ctcattaacaaccttgtaatgagct 32603697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 19981332 - 19981518
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||||| ||  ||  ||||||||||||||||||||| ||| | || || || || |||||||||||||     
T  19981332 gacaagcattgctcttgtggcctttctcaccacaattaaagaagacaatctcagcaggaacatccttcttccttggtcgcctatcttcgaccatcctcta 19981431  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||    
T  19981432 tttgcccttatcagcaggggcgctataaggcttagggcgactctgctggcccttagtcttccactcattcacgaccttgtaatgagc 19981518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 21391299 - 21391091
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| |||| || ||| || ||||| |||| || |||||||||||||| ||||||   ||| |   ||||||||||||| ||||||| ||| | ||||    
T  21391299 aaacatctcttgacgtccccaggacaagcattactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatccttcttcctcggcc 21391200  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    |||| || |||||||| |||| ||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||| || ||||||||| | |||    
T  21391199 gtctatcttcgaccattctctatttgcccttatcaacaagggcactataaggcttagggcgactctgctggcccttagtcttcctctcattcacgatctt 21391100  T
Q  216 gtaatgagc 224  Q
    |||||||||    
T  21391099 gtaatgagc 21391091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 21780625 - 21780417
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| |||| || ||| || ||||| |||| || |||||||||||||| ||||||   ||| |   ||||||||||||| ||||||| ||| | ||||    
T  21780625 aaacatctcttgacgtccccaggacaagcattactcttgtggcctttctcaccacaagaaaaacaaacaatctcagcaggagcatccttcttcctcggcc 21780526  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    |||| || |||||||| |||| ||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||| || ||||||||| | |||    
T  21780525 gtctatcttcgaccattctctatttgcccttatcaacaagggcactataaggcttagggcgactctgctggcccttagtcttcctctcattcacgatctt 21780426  T
Q  216 gtaatgagc 224  Q
    |||||||||    
T  21780425 gtaatgagc 21780417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 18881073 - 18880887
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| | ||| ||  ||| |  |||||| ||||||| |||||||||||||| || |||||||| |||||    
T  18881073 gacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatttttgcaggagcatccttcttcttaggccgtctatcttcgaccattctctg 18880974  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||| | | ||||| || ||||||||||||||||| || |||||||||| |||||||||||| | ||||||||||||    
T  18880973 tttgcccttatcagtaggggcactgtaaggcttagggcgactctgctgacccttagtcttccgctcattcactatcttgtaatgagc 18880887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18859905 - 18860125
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||| ||| | || |||||||| |||||||||||| | |||||||||||| |   |||||| ||||   |||    
T  18859905 ttcttgccacaccgaacacacttcttgatttcttcagggcatacattgcttttgtggcctttcccaccacaattgaaacacacaatctctgcag---cat 18860001  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||||| |||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  18860002 ccttcttcttaggccgcctatcatcgaccatcccctgtttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 18860101  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  18860102 ctcattcactaccttgtagtgagc 18860125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 22031431 - 22031545
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| |||||||||||  || | | ||||||||||||| || |||||||| || |||||||||||| | ||||||||||| ||| |||    
T  22031431 ttcttgccacaccggacacatttctttatctctttaggacaaacattgctcttatggccttt-tcaccacaattgaaacaagtaatctcagctggagcat 22031529  T
Q  101 ccttattcttaggccg 116  Q
    |||| |||||||||||    
T  22031530 ccttcttcttaggccg 22031545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 22126412 - 22126192
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||| |||||  | || ||||| |||||||||||| | |||||||||||| |   |||||| | ||   |||    
T  22126412 ttcttgccacaccgaacacacttcttgatttcttcaaggaagacgttgcttttgtggcctttcccaccacaattgaaacacacaatctctgtag---cat 22126316  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  22126315 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 22126216  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  22126215 ctcattcactaccttgtagtgagc 22126192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 21671969 - 21672065
Alignment:
Q  127 accatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    ||||| |||||||| |||||||||||| ||||||| || |||||||| |||||||| || ||||| | ||  ||||||||||||| |||||||||||    
T  21671969 accattctctgtttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacccttggcctttcgctcattcacaatcttgtaatgag 21672065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 19481525 - 19481311
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | |||||||  |||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  19481525 ttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 19481429  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| ||||| |||||  | ||||| || |||||||| |||||||| || ||||||  || ||     
T  19481428 ccttcttcttaggccgcctaacatcgaccatcttctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacccttcct 19481329  T
Q  201 ctcattcacaaccttgta 218  Q
    ||||||||| ||||||||    
T  19481328 ctcattcactaccttgta 19481311  T

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Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 17671475 - 17671255
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || || ||| ||||| | ||||||  | || |||||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  17671475 ttcttgccacaccagacacacttcttgatttcctccgggcagacattgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 17671379  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  17671378 ccttcttcttaggccgcctaacatcgaccatcttctgtttacctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 17671279  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  17671278 ttcattcactaccttgtagtgagc 17671255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 19115728 - 19115948
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| |||||  || ||||| | ||||||| ||||  | ||||| ||||||||||||||||||||||||||  |   || ||| ||||   |||    
T  19115728 ttcttaccacaccggacgcacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcgccacaattgaagcacacaacctctgcag---cat 19115824  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   || ||     
T  19115825 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 19115924  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  19115925 ttcattcactaccttgtagtgagc 19115948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 20015716 - 20015496
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||||||| | || || || || |||||||| ||||| |||||||||||| |   |||||| ||||   |||    
T  20015716 ttcttgccacaccgaacacacttcttgatttcctcagggcagacgttactcttgtggcccttctcaccacaattgaaacacacaatctctgcag---cat 20015620  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    || | ||||||||||||||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   || ||     
T  20015619 ccctcttcttaggccgtctcacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 20015520  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  20015519 ttcattcactaccttgtagtgagc 20015496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 224
Target Start/End: Complemental strand, 22117534 - 22117408
Alignment:
Q  98 catccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtcta 197  Q
    ||||||||||||||||||| || || |||||||| |||||||| || |||||||   | ||||| || |||||||| ||||| || || |||||   ||     
T  22117534 catccttattcttaggccgcctatcatcgaccattctctgtttccctttatcagtgggggcactgtacggcttaggacgactttgctgtcccttgccctt 22117435  T
Q  198 ccgctcattcacaaccttgtaatgagc 224  Q
    || ||||||||| |||||||| |||||    
T  22117434 cctctcattcactaccttgtagtgagc 22117408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 22421237 - 22421123
Alignment:
Q  110 taggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcac 209  Q
    ||||||| || || || ||||| |||||||||||||||| |||| ||||||| || ||||| || |||||||| || || ||    | ||||||||||||    
T  22421237 taggccgcctctcatcaaccattctctgtttgcccttattagcaggagcactgtaaggctttggacgactctgctgacctttgactttccgctcattcac 22421138  T
Q  210 aaccttgtaatgagc 224  Q
    || ||||||||||||    
T  22421137 aatcttgtaatgagc 22421123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 21928887 - 21928983
Alignment:
Q  132 cctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctta-gtctaccgctcattcacaaccttgtaatgagctttg 228  Q
    ||||||||| || || |||||| |||||||||| || ||||| ||||||||||| ||||||  |||| |||||| |||  ||||||||||||||||||    
T  21928887 cctctgttttcctttgtcagcaggagcactatacggtttaggacgactctgttgtcccttacctcta-cgctcactcatcaccttgtaatgagctttg 21928983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 28984366 - 28984466
Alignment:
Q  128 ccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagcttt 227  Q
    |||||||||| || ||||| || ||| ||||||| || |||||||| ||| ||||||| ||||||  |  || |||| ||| || |||||||||||||||    
T  28984366 ccatcctctgctttcccttgtccgcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttgtaatgagcttt 28984465  T
Q  228 g 228  Q
    |    
T  28984466 g 28984466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 9e-57; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 18224223 - 18224000
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||| |||||||||| |  |||||||||||||||||||| |||||| |   |||||| |||||| |||    
T  18224223 ttcttgccacaccggacacatttcttgatctcttcaggacaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcat 18224124  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||||| || | |||||||| ||||||||||||||||| |||||||| |||| |||    
T  18224123 ccttcttcttaggccgtctatcatcgaccattctctgtttgcccttatcaacaggggcactataaggcttagggcgactctgctggcccttggtcttccg 18224024  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  18224023 ctcattcacaaccttgtaatgagc 18224000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 39 - 224
Target Start/End: Complemental strand, 16248388 - 16248203
Alignment:
Q  39 acaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgt 138  Q
    ||||||||| || |||||||||||||| ||| |||||||| | ||||||||||  ||| ||||||| ||||||||||| || || |||||||| ||||||    
T  16248388 acaaacattactcttgtggcctttctcaccataattgaaacatgtaatctcagttggagcatccttcttcttaggccgcctatcatcgaccattctctgt 16248289  T
Q  139 ttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    | ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  16248288 tggcccttatcagcaggggcactatagggcttagggcgactctgctggcccttagtcttctgctcattcacaaccttgtaatgagc 16248203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13513612 - 13513836
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||| ||||||||||||| |||||||||||||||||||| |||||| ||  |||||| |||||| |||    
T  13513612 ttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcat 13513711  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || || ||||| ||||| |||||||||||| || | |||||||| ||||||||||||||||| |||||||| |||| ||     
T  13513712 ccttcttcttaggccgcctatcatcaaccattctctgcttgcccttatcaacaggggcactataaggcttagggcgactctgctggcccttggtcttcct 13513811  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||| ||||||||||||||||||    
T  13513812 ctcattaacaaccttgtaatgagct 13513836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 18604566 - 18604345
Alignment:
Q  4 ttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatcct 103  Q
    ||||||| ||||| ||||||||| |  || ||| |||||||||| || |||||||||||||||||||| || ||| |  ||||||| | |||| ||||||    
T  18604566 ttgccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcgccacagttaaaacaaataatctccgaaggagcatcct 18604467  T
Q  104 tattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctc 203  Q
    | ||||||||||| || || |||||||| ||||| ||||||||||||||| | ||| |||| ||||||||||||||||| ||||||||||||| || |||    
T  18604466 tcttcttaggccgcctatcatcgaccattctctgcttgcccttatcagcaggggcattataaggcttagggcgactctgctggcccttagtcttcctctc 18604367  T
Q  204 attcacaaccttgtaatgagct 225  Q
    ||| ||||||||||||||||||    
T  18604366 attaacaaccttgtaatgagct 18604345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 16350408 - 16350265
Alignment:
Q  85 atctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgtt 184  Q
    ||||| |||||| ||||||| ||||||||||| || || |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| |    
T  16350408 atctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgct 16350309  T
Q  185 ggcccttagtctaccgctcattcacaaccttgtaatgagctttg 228  Q
    |||||||||||| ||||||||| |||||||||||||||||||||    
T  16350308 ggcccttagtcttccgctcatttacaaccttgtaatgagctttg 16350265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 15144587 - 15144475
Alignment:
Q  112 ggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaa 211  Q
    |||||||| || |||||||| ||||||||||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||| |||||||||||| |    
T  15144587 ggccgtctatcttcgaccattctctgtttgcccttatcagcaggggcgctataaggcttagggcgactctgctggcccttagtcttccgctcattcacga 15144488  T
Q  212 ccttgtaatgagc 224  Q
    |||||||||||||    
T  15144487 ccttgtaatgagc 15144475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14300729 - 14300509
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||||| || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  14300729 ttcttgccacaccggacacacttcttgatttcctcaaggcagacgttgcttttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 14300633  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   || ||     
T  14300632 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 14300533  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  14300532 ctcattcactaccttgtagtgagc 14300509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 19635398 - 19635618
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||| ||| | || |||||||| |||||||||||| | |||||||||||| |   |||||| ||||   |||    
T  19635398 ttcttgccacaccgaacacacttcttgatttcttcagggcatacattgcttttgtggcctttcccaccacaattgaaacacacaatctctgcag---cat 19635494  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||  | ||||| || |||||||| | |||||| || |||||   || ||     
T  19635495 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcgggggcactgtacggcttaggacaactctgctgtcccttgcccttcct 19635594  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| |||||||| |||||    
T  19635595 ctcattcactaccttgtagtgagc 19635618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 14683829 - 14684016
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| |  || ||| |||| |||| ||| |||||||||||| | |||||||||||| |   |||||| | ||   |||    
T  14683829 ttcttgccacaccggacacacttcttgatctcttcaggacagacatagcttttgtggcctttcccaccacaattgaaacacacaatctcggtag---cat 14683925  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||||||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||    
T  14683926 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagcaggggcactgtatggcttaggacgactctgctgtccctt 14684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 8050373 - 8050153
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||| ||||| | ||||||| | || || ||||| |||||||| ||||| |||||||||||| |   |||||| ||||   |||    
T  8050373 ttcttgccacaccgaacacacttcttgatttcctcagggcagacgttgctcttgtggcccttctcaccacaattgaaacacacaatctctgcag---cat 8050277  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    || | ||||||||||||||  | ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||   || ||     
T  8050276 ccctcttcttaggccgtctcacatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 8050177  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  8050176 ttcattcactaccttgtagtgagc 8050153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 14162852 - 14162923
Alignment:
Q  121 tcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctta 192  Q
    ||||||||||| |||||||| |||||||||||| ||||||| || |||||||| ||||||||||| ||||||    
T  14162852 tcctcgaccattctctgtttacccttatcagcaggagcactgtaaggcttaggacgactctgttgtccctta 14162923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 17091899 - 17091679
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||||| |||||||||||| |   |||||| ||||   |||    
T  17091899 ttcttaccacaccggacacacttcttgatttcctcagggcagacgttgctcttgtggcctttctcaccacaattgaaacacacaatctctgcag---cat 17091803  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  17091802 ccttcttcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 17091703  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  17091702 ttcattcactaccttgtagtgagc 17091679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 40476347 - 40476478
Alignment:
Q  46 ttgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgccct 145  Q
    ||||| |||||||||||| | |||||||||||| |   |||||||| ||   ||||||| ||||||||||| || || ||||||||| ||||||| || |    
T  40476347 ttgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---catccttcttcttaggccgcctatcatcgaccatcttctgtttccctt 40476443  T
Q  146 tatcagcaagagcactatagggcttagggcgactc 180  Q
    |||||||| | ||||| || |||||||| ||||||    
T  40476444 tatcagcaggggcactgtacggcttaggacgactc 40476478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 223
Target Start/End: Original strand, 8335 - 8520
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| |  |  ||  ||||||| ||||| |||| || ||  |||| || || || || ||||| |||||    
T  8335 gacaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttatagggcgcctctcatcaaccattctctg 8434  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    ||| |||||||||||| ||||||| || |||||||| |||||||| || || || |  |  ||||||||||||| |||||||||||    
T  8435 tttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgtaatgag 8520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 8389674 - 8389894
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  8389674 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 8389770  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||| || ||  | ||||||||| ||||||| ||||| |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  8389771 ccttcttcttaggtcgcctaacatcgaccatcttctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 8389870  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  8389871 ttcattcactaccttgtagtgagc 8389894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 12479862 - 12480082
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| || ||||||||||| |||||||||||| |   |||||| ||||   |||    
T  12479862 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgctcttatggcctttctcaccacaattgaaacacacaatctctgcag---cat 12479958  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    ||||  |||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  12479959 ccttcctcttaggccgcctaacatcgaccatcttctgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 12480058  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  12480059 ttcattcactaccttgtagtgagc 12480082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 16233742 - 16233522
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||| ||||| | ||||||| ||||  | ||||| |||||||||||||| ||||||||||| ||   |||||| ||||   |||    
T  16233742 ttcttaccacaccggacacacttcttgatttcctcaggacaggcgttgctcttgtggcctttctcaccacaattgaagtacacaatctctgcag---cat 16233646  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| | ||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  16233645 ccttcttcttaggccgcctaacatcgaccatcttttgtttccctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 16233546  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  16233545 ttcattcactaccttgtagtgagc 16233522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27714598 - 27714818
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | ||  | ||||| |||||||||||||| |||||||||||  |   |||||| ||||   |||    
T  27714598 ttcttgccacaccggacacacttcttgatttcctcagggcaggcgttgctcttgtggcctttctcaccacaattgaagcacacaatctctgcag---cat 27714694  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| ||  | ||||||||| ||||||| || || |||||  | ||||| || |||||||| |||||||| || |||||   || ||     
T  27714695 ccttcttcttaggccgcctaacatcgaccatcttctgtttacctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcct 27714794  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
     |||||||| |||||||| |||||    
T  27714795 ttcattcactaccttgtagtgagc 27714818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15592 - 15366
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||||||| |||||| | |||||  |||||| |||||| |||||||||||||| |||||||||||| || | ||||| |||||| |||    
T  15592 ttcttgccacaccggaaacacttctttgcctcctctggacaaaaattgctcttgtggcctttctcaccacaattgaaacagatgatctccgcaggagcat 15493  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| ||||||||||||||||||||  | ||||||||||||||||||| |||||| |||| |||||||| ||     
T  15492 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagctggggcactatagggcttagggcaactctgctggcgcttagtcttcca 15393  T
Q  201 ctcattcacaaccttgtaatgagcttt 227  Q
    |||||| ||||| ||||||||||||||    
T  15392 ctcatttacaacattgtaatgagcttt 15366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 41 - 224
Target Start/End: Original strand, 445 - 628
Alignment:
Q  41 aaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgttt 140  Q
    |||||||||| |||||||||||||| |||||||| ||| ||  ||||||||||||| ||| ||| |||||||| || || || |||||||| ||||||||    
T  445 aaacattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcattcttcttcttaggtcgcctatcatcgaccattctctgttt 544  T
Q  141 gcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||||||||||||    
T  545 gcccttatcagcaggagcactatagggcttagggcgactctgctggcccttagtcttccgctcattcaccatcttgtaatgagc 628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 5289 - 5512
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| || || ||||||||| |  || ||| |||||||||| || || ||||| ||||||||||| |||||| |   |||||| |||||| |||    
T  5289 ttcttgccacaccagacacatttcttgatctcttcaggacaaacattactcttatggcccttctcgccacagttgaaacaaacaatctccgcaggagcat 5388  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||||||||| || || |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| |||    
T  5389 ccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaagggcactataaggcttagggcgactctgctggcccttggtcttccg 5488  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  5489 ctcattcacaaccttgtaatgagc 5512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14715 - 14938
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || |||||||||||||| || |||||||| ||||||||||| |||||| |   |||||| |||||| |||    
T  14715 ttcttgccacaccggacacatttcttgatctcttcaagacaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcat 14814  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| |||||||||||  | || |||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||| |||||||| |||| |||    
T  14815 ccttcttcttaggccgcatatcatcgaccattctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgctggcccttggtcttccg 14914  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||| |||||||||    
T  14915 ctcattcacaacctagtaatgagc 14938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 139623 - 139400
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  ||  || |||||||||| || |||||||||||||| |||||||||||  | ||||||||||| |||  ||    
T  139623 ttcttgccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcagctggagtat 139524  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    || | ||||||||||| || || |||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||| |||||||| |||| |||    
T  139523 ccctcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgctggcccttggtcttccg 139424  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  139423 ctcattcacaaccttgtaatgagc 139400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 141 - 363
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| ||||| ||||||||| |  ||  || |||||||||| || |||||||||||||| |||||||||||  | ||||||||| | ||| |||    
T  141 ttcttaccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcaactggagcat 240  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    || | |||||||| || || || |||||||| ||||||||||||||||||||| | |||||||| |||||| | |||||||| |||||||| |||| |||    
T  241 ccctcttcttagggcgcctatcatcgaccattctctgtttgcccttatcagcaggggcactataaggctta-gacgactctgctggcccttggtcttccg 339  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||| ||||||||||||    
T  340 ctcattcacaatcttgtaatgagc 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 36796 - 36610
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| || |||||||||||||||||||| ||| ||  ||||||||||||| ||||||| ||| | |||||||| |||||||||||||| ||    
T  36796 gacaagcattgctcttatggcctttctcgccacaattaaaacagacaatctcagcaggagcatccttcttccttggccgtctatcctcgaccatcctttg 36697  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||| ||||| |||||||| ||||||||||||    
T  36696 tttgcccttatcagcaggggcactatagggcttagggcgactctgctggcccttactcttccgctaattcacaatcttgtaatgagc 36610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 122138 - 121966
Alignment:
Q  52 ttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcag 151  Q
    ||||||||||| || |||||||||||| | ||||||||||| ||| ||||||| ||||||||||| || || |||||||| |||||||||||||||||||    
T  122138 ttgtggcctttttcaccacaattgaaacaagtaatctcagctggagcatccttcttcttaggccgcctatcatcgaccattctctgtttgcccttatcag 122039  T
Q  152 caagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    || | ||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||    
T  122038 caggggcactatagggcttagggcgactctattggcccttagtcgtccgctcatttacaaccttgtaatgagc 121966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 782 - 559
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  ||  || |||||||||| || |||||| ||||||| |||||||||||| | ||||||||||| ||| |||    
T  782 ttcttgccacaccggacacatttcttgatctctacaggacaaacattactcttgtggtctttctcaccacaattgaaacaagtaatctcagctggagcat 683  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    || | ||||||||||| || || |||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||| | | |||| |||| |||    
T  682 ccctcttcttaggccgcctatcatcgaccattctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgcttgtccttggtcttccg 583  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  582 ctcattcacaaccttgtaatgagc 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 7658 - 7447
Alignment:
Q  13 cggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttag 112  Q
    |||||| || ||||||| || ||  |||||| |||||| |||||||||||||| |||||||| ||  ||  ||||||||||||||||||||| |||||||    
T  7658 cggaaatatctctttacctcttccggacaaatattgctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttag 7559  T
Q  113 gccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaac 212  Q
    |||| || || |||||||| ||||||||||||||||||||| | ||||| || ||||||||||||||||| ||||| ||||||| ||||||||||||||     
T  7558 gccgcctatcttcgaccattctctgtttgcccttatcagcaggggcactgtaaggcttagggcgactctgctggcctttagtcttccgctcattcacaat 7459  T
Q  213 cttgtaatgagc 224  Q
    ||||||||||||    
T  7458 cttgtaatgagc 7447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 368 - 554
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||||| ||| |   ||||||||||||||||||||| ||| | ||||| || || ||||||||||||||    
T  368 gacaagcattgctcttgtggcctttctcaccacaattaaaacaaacaatctcagcaggaacatccttcttccttggccgcctatcttcgaccatcctctg 467  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  468 tttgcccttatcagcaggggcgctataaggcttagggcgactctgctggcccttagtcttccgctcatacacaaccttgtaatgagc 554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 30575 - 30364
Alignment:
Q  13 cggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttag 112  Q
    ||||||||| ||||||| ||  |  ||||| ||||||| |||||||||||||| |||||||| ||| ||  ||||||||||||| ||||||| ||| | |    
T  30575 cggaaacatctctttacctctcctggacaagcattgctcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatccttcttccttg 30476  T
Q  113 gccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaac 212  Q
    ||||| | |||||||||||||||||||| |||||||||||| | | |||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||     
T  30475 gccgtttatcctcgaccatcctctgttttcccttatcagcaggggtactatagggcctagggcgactctgctggcctttagtcttccgctcattcacaat 30376  T
Q  213 cttgtaatgagc 224  Q
    ||||||||||||    
T  30375 cttgtaatgagc 30364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 43429 - 43243
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| |  |  ||  ||| |||||| || |||| || ||||| ||||| || || || || || |||||    
T  43429 gacaagcattactcttgtggcctttctcaccacaagtatagcagacaatttcagcaagaccatctttcttcttgggccgcctatcatcaactattctctg 43330  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||| |||||||||||| |||||||||| ||||||||||||||||| |  || || || | |||||||||||||| |||||| |||||    
T  43329 tttacccttatcagcaggagcactataaggcttagggcgactctgcttacctttggttttccgctcattcacaatcttgtattgagc 43243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 171409 - 171632
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||| | ||||||||| |  ||  || |||||||||| || |||||||||||||| ||||||||| || | ||||||||| | ||| |||    
T  171409 ttcttgccacaccgaacacatttcttgatctctacaggacaaacattactcttgtggcctttctcaccacaattgtaacaagtaatctcaactggagcat 171508  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| ||||| || ||  ||||||| ||||||||||||||||||||| | || ||||||||||||||||||||||| |||||||| |||| |||    
T  171509 ccttcttctttggccgcctatcaacgaccattctctgtttgcccttatcagcaggggcgctatagggcttagggcgactctgctggcccttggtcttccg 171608  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||||||||||||||    
T  171609 ctcattcacaaccttgtaatgagc 171632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 230 - 436
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| ||||||| ||  | |||||| ||||||| |||||||||||||| |||||||| ||  ||  ||||||||||||||||||||| ||||||||||    
T  230 aaacatctctttacctctcccagacaagcattgctcttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggcc 329  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    |||| ||||||||||| ||||||||||||||||||||| | ||||| || |||||||| ||||||| ||| ||| | |||| |||||||||||||| |||    
T  330 gtctatcctcgaccattctctgtttgcccttatcagcaggggcactgtacggcttaggacgactctattgtcccctggtcttccgctcattcacaatctt 429  T
Q  216 gtaatga 222  Q
    |||||||    
T  430 gtaatga 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 14390 - 14598
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| |||| || ||| |||||||| |||| || || |||||||||||||||||| | ||| ||  |||||| |||||| ||||||| ||||||||||    
T  14390 aaacatctcttaacatccccaagacaagcattactcttatggcctttctcgccacaagtaaaacagacaatctctgcaggagcatccttcttcttaggcc 14489  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    | || || | |||||| |||||||||||||||||||||   |||||||| |||||||||||||||||||| |||||||||| |||||||||||||| |||    
T  14490 gcctatcattgaccattctctgtttgcccttatcagcagaggcactataaggcttagggcgactctgttgacccttagtcttccgctcattcacaatctt 14589  T
Q  216 gtaatgagc 224  Q
    |||||||||    
T  14590 gtaatgagc 14598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 11569 - 11777
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| |||| || ||| |||||||| |||| || |||||||||||||| |||||| | ||| ||  |||||| ||| || ||||||| ||||||||||    
T  11569 aaacatctcttgacatccccaagacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcatgagcatccttcttcttaggcc 11668  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    | || || |||||||| ||||||||||||||||||| | ||||||| || ||||||||||||||||| || |||||||  | |||||||||||||| |||    
T  11669 gcctatcttcgaccattctctgtttgcccttatcagtaggagcactgtaaggcttagggcgactctgctgacccttagctttccgctcattcacaatctt 11768  T
Q  216 gtaatgagc 224  Q
    | |||||||    
T  11769 gaaatgagc 11777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 354 - 168
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| | ||| ||  |||||| |||||| ||||||| |||||||||||||| || ||||||||||||||    
T  354 gacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatccttcttcttaggccgtctatcttcgaccatcctctg 255  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | ||||| || ||||||||||||||||  || |||||||||| |||||||||||| | ||||||||||||    
T  254 tttgcccttatcagcaggggcactgtaaggcttagggcgactcttctgacccttagtcttccgctcattcacgatcttgtaatgagc 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 21932 - 22118
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||| | |||||||||||||| |||||||| ||| ||  ||||||||||||| ||||||| ||| | |||||||| || ||||||||||||||    
T  21932 gacaagcattgatcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatccttcttccttggccgtctatcatcgaccatcctctg 22031  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||||||||  |||| | ||||||||||||||| | |||||| | ||||||||||||| |||||||||||||| ||||||||||||    
T  22032 tttgcccttaaaagcaggggcactatagggcttaagacgactcagctggcccttagtcttccgctcattcacaatcttgtaatgagc 22118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 37356 - 37542
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||| | |||||||||||||| |||||||| ||| ||  ||||||||||||| ||||||| ||| | |||||||| || ||||||||||||||    
T  37356 gacaagcattgatcttgtggcctttctcaccacaattaaaacagacaatctcagcaggagcatccttcttccttggccgtctatcatcgaccatcctctg 37455  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||||||||  |||| | ||||||||||||||| | |||||| | ||||||||||||| |||||||||||||| ||||||||||||    
T  37456 tttgcccttaaaagcaggggcactatagggcttaagacgactcagctggcccttagtcttccgctcattcacaatcttgtaatgagc 37542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 7792 - 7568
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||| |||||||||| || |||||||||||| ||||||| |||||| |   ||| || ||||||  |     
T  7792 ttcttgccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagtag 7693  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||||||||| ||||| || || |||||||| |||| |||||| ||||||||| | |||||||| || |||||||||||||| |||||||| |||| |||    
T  7692 ccttattctttggccgcctatcgtcgaccattctctatttgcctttatcagcaggggcactataaggtttagggcgactctgctggcccttggtcttccg 7593  T
Q  201 ctcattcacaaccttgtaatgagct 225  Q
    |||||||||||||||||||||||||    
T  7592 ctcattcacaaccttgtaatgagct 7568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 224
Target Start/End: Complemental strand, 66460 - 66320
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    |||||||  |||| ||||||| ||| | |||||||| ||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||     
T  66460 aatctcaataggagcatccttcttccttggccgtctatcctcaaccattctctgtttgcccttatcagcaggggcactatagggcttagggcgactctgc 66361  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  66360 tggcccttagtcttccgctcattcacaaccttgtaatgagc 66320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 50321 - 50135
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||||| ||  ||  ||||||||||||||||||||| ||||||||||| || || |||||||| |||||    
T  50321 gacaagcattgcttttgtggcctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttaggccgcctatcatcgaccattctctg 50222  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||| | || ||||| ||||||||| ||||||| | |||| ||| || |||||||||||| | ||||||||||||    
T  50221 tttgcccttatcagcaggggcgctataaggcttagggagactctgctagcccatagccttccgctcattcacgatcttgtaatgagc 50135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 10171 - 10019
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||| ||  |||||| | |||| |||    
T  10171 ttcttgccacaccggaaacatttctttacctcctctagacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgtaggagcat 10072  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagca 153  Q
    |||| |||||||||||||| || |||||||| |||||||| ||||| ||||||    
T  10071 ccttcttcttaggccgtctatcatcgaccattctctgttttcccttgtcagca 10019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 15285 - 15424
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    |||||| | |||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  15285 aatctctgtaggagcatccttcttcttaggccgtctatcttcgaccatcctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgt 15384  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    || |||||||  | |||||||||||||| |||||||||||    
T  15385 tgacccttagctttccgctcattcacaatcttgtaatgag 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 1 - 92
Alignment:
Q  134 tctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagct 225  Q
    |||||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  1 tctgtttgcccttatcagcaggggcactatagggcttagggtgactctgctggcccttagtcttccgctcattaacaaccttgtaatgagct 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 9441 - 9233
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| |||| || ||| || ||||| |||| || |||||||||||||| |||||| | ||| ||  |||||| |||||| ||||||| |||| |||||    
T  9441 aaacatctcttgacatccccaggacaagcattactcttgtggcctttctcaccacaagtaaaacagacaatctctgcaggagcatccttcttctaaggcc 9342  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    | || || |||||||| ||| ||||||||||||||||| | |||||||| |||||| |||||||||| || |||||||||| | |||||||||||| |||    
T  9341 gcctatcttcgaccattctcggtttgcccttatcagcaggggcactataaggcttaaggcgactctgctgacccttagtcttcggctcattcacaatctt 9242  T
Q  216 gtaatgagc 224  Q
    |||||||||    
T  9241 gtaatgagc 9233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 38 - 222
Target Start/End: Original strand, 30615 - 30799
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||| ||||||| |||||||| ||  ||  ||||||||||||||||||||| ||||||| ||| || ||||||||||| |||||    
T  30615 gacaagcattgctcttgtggtctttctcaccacaattaaagcagacaatctcagcaggaacatccttcttcttagaccgcctatcctcgaccattctctg 30714  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatga 222  Q
    |||||| ||||||||| | ||||| || ||||||||  |||||||||| ||| | |||| |||||||||||||| ||||||||||    
T  30715 tttgcctttatcagcaggggcactgtacggcttaggatgactctgttgtcccctggtcttccgctcattcacaatcttgtaatga 30799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 6882 - 7014
Alignment:
Q  92 caggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    ||||| ||||||| |||||||| ||||| || ||||||||||||||||||| |||||||||| | ||||| || ||||||||||||||||| || |||||    
T  6882 caggagcatccttcttcttaggtcgtctatcttcgaccatcctctgtttgcacttatcagcaggggcactgtaaggcttagggcgactctgctgaccctt 6981  T
Q  192 agtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||| |||||||||||||| ||||||||||||    
T  6982 agtcttccgctcattcacaatcttgtaatgagc 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 17279 - 17143
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    |||||| | |||| ||||||| |||||||| ||||| || |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  17279 aatctctgtaggagcatccttcttcttaggtcgtctatcttcgaccatcctctgtttgcccttatcagcaggggcactataaggcttagggcgactctgt 17180  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaat 220  Q
    || |||||||  | |||||||||||||| ||||||||    
T  17179 tgacccttagctttccgctcattcacaatcttgtaat 17143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 222
Target Start/End: Complemental strand, 10810 - 10672
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    |||||| | |||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||||| | ||||| || |||||||||||||||| |    
T  10810 aatctctgtaggagcatccttcttcttaggccgtctgtcttcgaccatcctctgtttgcccttatcagcaggggcactgtaaggcttagggcgactcttt 10711  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatga 222  Q
    || |||||||  | |||||||||||||| ||||||||||    
T  10710 tgacccttagctttccgctcattcacaatcttgtaatga 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 34673 - 34561
Alignment:
Q  112 ggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaa 211  Q
    |||||||| || |||||||| ||||||||||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||| |||||||||||| |    
T  34673 ggccgtctatcttcgaccattctctgtttgcccttatcagcaggggcgctataaggcttagggcgactctgctggcccttagtcttccgctcattcacga 34574  T
Q  212 ccttgtaatgagc 224  Q
    |||||||||||||    
T  34573 ccttgtaatgagc 34561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 8785 - 8924
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    |||||||| ||||  |||||| |||||||| ||||| || ||||||||||||||||| |||||||||||| | ||||| || ||||||||||||||||||    
T  8785 aatctcagtaggagtatccttcttcttaggtcgtctatcttcgaccatcctctgttttcccttatcagcaggggcactgtaaggcttagggcgactctgt 8884  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    || |||||||  | |||||||||||||| |||||||||||    
T  8885 tgacccttagctttccgctcattcacaatcttgtaatgag 8924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 8551 - 8737
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||  |||||| | ||  ||  |||||  |||||| ||||||| ||||||||||| || |  |||||||| |||||    
T  8551 gacaagcattactcttgtggcctttctgaccacaagtaaagcagacaatctttgcaggagcatccttcttcttaggccgcctattatcgaccattctctg 8650  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||| ||||||||||| || ||||||||||||||||| || |||||||  | |||||||||||||| ||||||||||||    
T  8651 tttgcccttatcggcaagagcactgtaaggcttagggcgactctgctgacccttagctttccgctcattcacaatcttgtaatgagc 8737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 265 - 404
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    |||||| |||||| ||||||| ||||| |||||||| || ||||||||||||||||| |||||||||||| | ||||| || ||||||||| |||||||     
T  265 aatctctgcaggagcatccttcttctttggccgtctatcttcgaccatcctctgttttcccttatcagcaggggcactgtaaggcttagggagactctgc 364  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    || |||||||  | |||||||||||||| |||||||||||    
T  365 tgacccttagctttccgctcattcacaatcttgtaatgag 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 1399 - 1496
Alignment:
Q  127 accatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    ||||| |||||||| |||||||||||| ||||||| || |||||||||||||||||||||||||| |||| ||| |||||||||| ||||||||||||    
T  1399 accattctctgtttacccttatcagcaggagcactgtaaggcttagggcgactctgttggcccttggtcttccgttcattcacaatcttgtaatgagc 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 38 - 223
Target Start/End: Original strand, 2317 - 2502
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| ||||||| |||||||||||||| |||||| |  |  |   |||||||| ||||||||| || |||||||| ||||| || || ||||| ||||     
T  2317 gacaagcattgctcttgtggcctttctcaccacaagtatagcacacaatctcagtaggaacatctttcttcttagggcgtctatcatcaaccattctcta 2416  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    ||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||| | ||  ||||||||||||| |||||||||||    
T  2417 ttttcccttatcagcaagggcactgtaaggcttaggacgactctgttgacccttggcctttcgctcattcacaatcttgtaatgag 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 170 - 398
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| || || ||||||||| |  || ||| |||||||||| || |||||||||||| ||||||| |||||| |   ||| || |||||| |||    
T  170 ttcttaccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcat 269  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| |||   || || |||||||| ||||| ||||||||||| ||| | |||||||| || |||||||||||||| |||| ||| |||| |      
T  270 ccttcttctttggcttcctatcatcgaccattctctgcttgcccttatctgcaggggcactataaggtttagggcgactctgctggctcttggtcttctt 369  T
Q  201 ctcattcacaaccttgtaatgagctttga 229  Q
    |||||| |||| |||||||||||||||||    
T  370 ctcattaacaatcttgtaatgagctttga 398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 13137 - 12909
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||| |||| || || ||||||||| |  || ||| |||||||||| || |||||||||||| ||||||| |||||| |   ||| || |||||| |||    
T  13137 ttcttaccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcat 13038  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||||| |||   || || |||||||| ||||| ||||||||||| ||| | |||||||| || |||||||||||||| |||| ||| |||| |      
T  13037 ccttcttctttggcttcctatcatcgaccattctctgcttgcccttatctgcaggggcactataaggtttagggcgactctgctggctcttggtcttctt 12938  T
Q  201 ctcattcacaaccttgtaatgagctttga 229  Q
    |||||| |||| |||||||||||||||||    
T  12937 ctcattaacaatcttgtaatgagctttga 12909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 182
Target Start/End: Original strand, 41483 - 41624
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||||||||||| |||||||||||| | |||||||||||| |   |||||||| ||   ||||||| ||||||||||| || || |||||||| |||||    
T  41483 gacaaacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---catccttcttcttaggccgcctatcatcgaccattctctg 41579  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctg 182  Q
    ||| || |||| |||| | ||| | || |||||||| | ||||||    
T  41580 tttccctttattagcaggggcaatgtacggcttaggacaactctg 41624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 19812 - 19911
Alignment:
Q  124 tcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    ||||||||||||||||| |||||||||||| | |||||||| ||||||||||||||||| || |||||||  | |||||||||||||| |||||||||||    
T  19812 tcgaccatcctctgttttcccttatcagcaggggcactataaggcttagggcgactctgctgacccttagctttccgctcattcacaatcttgtaatgag 19911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 10659 - 10846
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || |||||||| |||||||||||| | |||||||||||| |   |||||||| ||   |||    
T  10659 ttcttgccacaccggacacacttcttgatttcctcagggcagacattgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---cat 10755  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||| ||||||| || ||||||||| | ||||| || |||||||| |||||||| || |||||    
T  10756 ccttcttcttaggccgcctatcatcgaccatcttctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 10846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 9328 - 9460
Alignment:
Q  91 gcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccct 190  Q
    |||||| ||||||| ||||||||   ||| || ||||||||||||||||||||||||||| || | |||||||| || |||| |||||||||||| ||||    
T  9328 gcaggagcatccttcttcttaggttatctatcttcgaccatcctctgtttgcccttatcaccaggggcactataaggattagcgcgactctgttgaccct 9427  T
Q  191 tagtctaccgctcattcacaaccttgtaatgag 223  Q
    |||  | |||||| ||||||| || ||||||||    
T  9428 tagctttccgctccttcacaatctagtaatgag 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 24616 - 24520
Alignment:
Q  124 tcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaat 220  Q
    ||||||||||||||||| |||||||||||| | |||||||| || ||||||||||||| |||  ||||||||| |||||||||||| | ||||||||    
T  24616 tcgaccatcctctgtttacccttatcagcaggggcactataaggtttagggcgactctattgatccttagtcttccgctcattcacgatcttgtaat 24520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 23943 - 23735
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| | ||||| ||| || ||||| |||| || |||||||||||||| |||||| |  || ||  ||||||| || ||  ||| || ||||||||||    
T  23943 aaacatctttttacgtccccaggacaagcattactcttgtggcctttctcaccacaagtataacagacaatctcaacatgagtatctttcttcttaggcc 23844  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
      || || || ||||| ||||||||||||||||||||| ||||||| || |||||||| |||||||| || || ||||  | | |||||||||||| |||    
T  23843 acctatcatcaaccattctctgtttgcccttatcagcaggagcactgtatggcttaggacgactctgctgacctttagctttctgctcattcacaatctt 23744  T
Q  216 gtaatgagc 224  Q
     ||||||||    
T  23743 ataatgagc 23735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 4477 - 4349
Alignment:
Q  92 caggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    ||||| |||| || ||||||||||| || || || ||||| ||||||||  ||||||||||| ||||||| || |||||||| |||||||| || || ||    
T  4477 caggagcatctttcttcttaggccgcctatcatcaaccattctctgtttatccttatcagcaggagcactgtaaggcttaggacgactctgctgaccttt 4378  T
Q  192 agtctaccgctcattcacaaccttgtaat 220  Q
     || | |||||||||||||| ||||||||    
T  4377 ggttttccgctcattcacaatcttgtaat 4349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 3929 - 4064
Alignment:
Q  88 tcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggc 187  Q
    ||||||||| |||| || ||||||||||| || || || ||||| |||||||| |||||||||||| ||||||| || | |||||| |||||||| || |    
T  3929 tcagcaggagcatctttcttcttaggccgcctatcatcaaccattctctgtttacccttatcagcaggagcactgtaagacttaggacgactctgctgac 4028  T
Q  188 ccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    | || || | || |||||| |||| |||||||||||    
T  4029 ctttggttttcctctcatttacaatcttgtaatgag 4064  T

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Target: scaffold0122 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 40505 - 40298
Alignment:
Q  16 aaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggcc 115  Q
    |||||| |||| || ||| || ||||| ||||||| |||||||||||||| |||||| |  |  |   ||||||||||||| |||| || ||  | || |    
T  40505 aaacatctcttaacatccccaggacaagcattgctcttgtggcctttctcaccacaagtatagaattcaatctcagcaggagcatctttctttctcgggc 40406  T
Q  116 gtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaacctt 215  Q
    | || || || ||||  |||||||| |||||||||||| | ||||| || |||||||| ||||||||||| ||||| | ||  ||||||||||||| |||    
T  40405 gcctatcatcaaccactctctgttttcccttatcagcaggggcactgtaaggcttaggacgactctgttgacccttggcctttcgctcattcacaatctt 40306  T
Q  216 gtaatgag 223  Q
    ||||||||    
T  40305 gtaatgag 40298  T

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Target: scaffold0003 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 424599 - 424822
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||||||||  |||| ||||||||| |  || ||| ||||||||||||| |||||||||||| | ||||| |||||  |   |||||||| |||| ||     
T  424599 ttcttgccacatcggacacatttcttaatctcttcaggacaaacattgcttttgtggcctttcacaccacagttgaagcacacaatctcagtaggagcac 424698  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccg 200  Q
    |||| ||| ||||||| || || ||||||||  | ||||| || ||||||||| | ||| | || |||||||| ||||| || || |||||   || |||    
T  424699 ccttcttcgtaggccgcctatcatcgaccatattttgtttccctttatcagcaggggcattgtacggcttaggacgactatgctgtcccttgcccttccg 424798  T
Q  201 ctcattcacaaccttgtaatgagc 224  Q
    ||||||||| | ||||||||||||    
T  424799 ctcattcaccatcttgtaatgagc 424822  T

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Target: scaffold0789 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 229 - 378
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||||||||| |  || ||| ||||||||||||| |||||||||||| | ||| |||||||| |   ||| |||| ||   |||    
T  229 ttcttgccacaccggacacatttcttaatctcttcaggacaaacattgcttttgtggcctttcccaccataattgaaacacacaatttcagtag---cat 325  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagca 153  Q
    |||| ||||||||||| || || ||||||||||||||||| || | |||||||    
T  326 ccttcttcttaggccgcctatcatcgaccatcctctgtttcccttcatcagca 378  T

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Target: scaffold0028 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 55295 - 55476
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||| ||| ||||| ||||||| |||||||||||  | ||||| |||||  |   ||| |||| |   ||||    
T  55295 ttcttgccacaccggacacacttcttaatttcttcaggacaaccattgctcttgtggccttttccaccacagttgaagcacacaatttcagaa---acat 55391  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttg 185  Q
    |||| ||||||||||| || || |||||||| |||||||| || ||||||||| | ||||| || |||||||| |||||||||||    
T  55392 ccttcttcttaggccgcctatcatcgaccattctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgttg 55476  T

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Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 21288 - 21416
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||| | |||||||||||| |   |||||||| ||   |||    
T  21288 ttcttgccacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---cat 21384  T
Q  101 ccttattcttaggccgtctttcctcgaccatc 132  Q
    |||| ||||||||||| || || |||||||||    
T  21385 ccttcttcttaggccgcctatcatcgaccatc 21416  T

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Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 11760 - 11888
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    ||||||| || ||||| ||| ||||| | ||||||| | || || ||||| |||||||||||| | |||||||||||| |   |||||||| ||   |||    
T  11760 ttcttgcgacaccggacacacttcttgatttcctcagggcagacgttgcttttgtggcctttcccaccacaattgaaacacacaatctcagtag---cat 11856  T
Q  101 ccttattcttaggccgtctttcctcgaccatc 132  Q
    |||| ||||||||||| || || |||||||||    
T  11857 ccttcttcttaggccgcctatcatcgaccatc 11888  T

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Target: scaffold0423 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 2185 - 2124
Alignment:
Q  92 caggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagca 153  Q
    ||||| ||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||    
T  2185 caggagcatccttcttcttcggccgtctatcttcgaccatcctctgtttgcccttatcagca 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 223
Target Start/End: Original strand, 48058 - 48243
Alignment:
Q  38 gacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctg 137  Q
    ||||| |||| || |||||||||||||| |||||| |  |  ||  ||||||| ||||| |||| || ||  |||| || || || || ||||| |||||    
T  48058 gacaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttctttctagggcgcctctcatcaaccattctctg 48157  T
Q  138 tttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    ||| |||||||||||| ||||||| || |||||||| |||||||| || || || |  |  ||||||||||||| |||||||||||    
T  48158 tttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgtaatgag 48243  T

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Target: scaffold0259 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 8549 - 8736
Alignment:
Q  1 ttcttgccaccccggaaacatttctttacttcctcaagacaaacattgctgttgtggcctttctcgccacaattgaaataggtaatctcagcaggaacat 100  Q
    |||||||||| | ||| ||| ||||| |  || ||| |||| |||||||| ||||||||| || | |||||||||||| |   |||||| | ||   |||    
T  8549 ttcttgccacactggacacacttcttgatctcttcaggacagacattgcttttgtggcctctcccaccacaattgaaacacacaatctcggtag---cat 8645  T
Q  101 ccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctt 191  Q
    |||| ||||||||||| || || ||||||||||||||||| || |||||||   | ||||| || |||||||| |||||||| || |||||    
T  8646 ccttcttcttaggccgcctatcatcgaccatcctctgtttccctttatcagttggggcactgtacggcttaggacgactctgatgtccctt 8736  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 65203 - 65109
Alignment:
Q  133 ctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagcttt 227  Q
    ||||| ||||||||||||||| | |||||||| ||||| |||||||||||||| || ||| ||   | |||| |||  |||||||||||||||||    
T  65203 ctctgcttgcccttatcagcaggggcactatatggcttcgggcgactctgttgtccattattccttctctcactcatcaccttgtaatgagcttt 65109  T

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Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 5475 - 5528
Alignment:
Q  132 cctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttg 185  Q
    ||||||||| |||||||||||| |||||||||| || ||||| |||||||||||    
T  5475 cctctgttttcccttatcagcaggagcactatatggtttaggacgactctgttg 5528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 11454 - 11542
Alignment:
Q  136 tgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagc 224  Q
    |||||||||||||||||| | |||||||| ||||| || ||||| || || |||||    | || ||||||||||||||||||||||||    
T  11454 tgtttgcccttatcagcaggggcactataaggcttgggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagc 11542  T

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Target: scaffold0100 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 228
Target Start/End: Complemental strand, 16478 - 16395
Alignment:
Q  145 ttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcattcacaaccttgtaatgagctttg 228  Q
    ||||||||| |||||||||| ||||| || |||||||| || | ||||  |  ||||||| ||| |||||||||||||||||||    
T  16478 ttatcagcaggagcactataaggctttggacgactctgctgactcttacccctccgctcactcataaccttgtaatgagctttg 16395  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 223
Target Start/End: Original strand, 104600 - 104739
Alignment:
Q  84 aatctcagcaggaacatccttattcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgt 183  Q
    ||||||| ||||| |||| || ||  ||||||| || || || | ||| |||||||| |||||||||||| |||||||||| ||||| || ||||||||     
T  104600 aatctcaacaggagcatctttctttctaggccgcctctcatcaatcattctctgttttcccttatcagcaggagcactataaggctttggacgactctgc 104699  T
Q  184 tggcccttagtctaccgctcattcacaaccttgtaatgag 223  Q
    || || ||    |  ||||||||||||| |||||||||||    
T  104700 tgacctttgacttttcgctcattcacaatcttgtaatgag 104739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 224
Target Start/End: Original strand, 413 - 531
Alignment:
Q  106 ttcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcat 205  Q
    ||||||||||  || || || ||||| ||| |||| |||||||||||| ||||||| || |||||||| |||||||| || || || |  | | ||||||    
T  413 ttcttaggccacctatcatcaaccattctcggtttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggctttctgctcat 512  T
Q  206 tcacaaccttgtaatgagc 224  Q
    |||||| ||| ||||||||    
T  513 tcacaatcttataatgagc 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 224
Target Start/End: Original strand, 4830 - 4948
Alignment:
Q  106 ttcttaggccgtctttcctcgaccatcctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggcccttagtctaccgctcat 205  Q
    ||||||||||  || || || ||||| ||| |||| |||||||||||| ||||||| || |||||||| |||||||| || || || |  | | ||||||    
T  4830 ttcttaggccacctatcatcaaccattctcggtttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggctttctgctcat 4929  T
Q  206 tcacaaccttgtaatgagc 224  Q
    |||||| ||| ||||||||    
T  4930 tcacaatcttataatgagc 4948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 19067 - 19119
Alignment:
Q  127 accatcctctgtttgcccttatcagcaagagcactatagggcttagggcgact 179  Q
    ||||| |||||||| |||||||||||| ||||||| || |||||||| |||||    
T  19067 accattctctgtttacccttatcagcaggagcactgtaaggcttaggacgact 19119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 98465 - 98405
Alignment:
Q  132 cctctgtttgcccttatcagcaagagcactatagggcttagggcgactctgttggccctta 192  Q
    |||||| || ||||| |||||| |||||||||| ||||| || ||||||||||| ||||||    
T  98465 cctctgcttacccttgtcagcatgagcactatatggcttcggacgactctgttgtccctta 98405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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