View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_428 (Length: 222)

Name: NF9913A_low_428
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_428
NF9913A_low_428
[»] chr3 (65 HSPs)
chr3 (14-150)||(6500221-6500358)
chr3 (14-150)||(9993157-9993295)
chr3 (16-150)||(10654503-10654638)
chr3 (29-148)||(12248670-12248789)
chr3 (16-150)||(16390782-16390916)
chr3 (16-139)||(14466464-14466589)
chr3 (16-139)||(20683017-20683142)
chr3 (16-139)||(38195616-38195741)
chr3 (16-139)||(13122535-13122660)
chr3 (16-139)||(28324068-28324193)
chr3 (16-139)||(37867320-37867445)
chr3 (16-139)||(39372945-39373070)
chr3 (16-139)||(19779260-19779386)
chr3 (16-139)||(5511568-5511694)
chr3 (16-139)||(5627236-5627362)
chr3 (16-139)||(20721986-20722112)
chr3 (16-159)||(23758172-23758320)
chr3 (16-139)||(4744611-4744738)
chr3 (16-139)||(5546841-5546968)
chr3 (16-139)||(6219938-6220061)
chr3 (39-139)||(13382497-13382596)
chr3 (39-139)||(13393091-13393190)
chr3 (39-139)||(18484961-18485061)
chr3 (16-139)||(5875514-5875640)
chr3 (39-139)||(16477176-16477277)
chr3 (39-139)||(8775592-8775692)
chr3 (16-139)||(24660791-24660918)
chr3 (16-139)||(12296037-12296163)
chr3 (16-139)||(41684551-41684677)
chr3 (52-139)||(9390427-9390515)
chr3 (52-132)||(4405260-4405341)
chr3 (52-139)||(29905340-29905428)
chr3 (52-139)||(29946506-29946593)
chr3 (52-139)||(29995660-29995747)
chr3 (67-118)||(13120758-13120809)
chr3 (52-139)||(7803723-7803815)
chr3 (52-139)||(17909220-17909312)
chr3 (52-132)||(1054674-1054754)
chr3 (52-132)||(1793701-1793781)
chr3 (67-139)||(11215885-11215960)
chr3 (52-132)||(14320865-14320945)
chr3 (52-132)||(15226127-15226207)
chr3 (52-132)||(15661918-15661998)
chr3 (52-132)||(16670338-16670419)
chr3 (52-126)||(12962409-12962482)
chr3 (65-119)||(22141537-22141591)
chr3 (52-132)||(9005674-9005754)
chr3 (140-214)||(9993071-9993149)
chr3 (70-118)||(15834288-15834336)
chr3 (54-131)||(17962359-17962438)
chr3 (54-131)||(18007263-18007342)
chr3 (52-118)||(18140845-18140910)
chr3 (52-126)||(52921183-52921255)
chr3 (52-132)||(14582178-14582258)
chr3 (174-214)||(6500139-6500179)
chr3 (52-129)||(18845446-18845523)
chr3 (52-104)||(18850901-18850952)
chr3 (52-126)||(16812524-16812598)
chr3 (52-111)||(49665712-49665769)
chr3 (52-110)||(16657967-16658024)
chr3 (84-118)||(21318059-21318093)
chr3 (174-204)||(37876015-37876045)
chr3 (70-111)||(30053577-30053618)
chr3 (174-214)||(12248596-12248636)
chr3 (83-119)||(19642919-19642955)
[»] chr7 (43 HSPs)
chr7 (16-136)||(19993330-19993449)
chr7 (16-139)||(8618243-8618368)
chr7 (16-139)||(17960042-17960167)
chr7 (16-139)||(167740-167865)
chr7 (16-139)||(4212869-4212994)
chr7 (16-139)||(11006059-11006184)
chr7 (16-133)||(21002329-21002446)
chr7 (16-139)||(5711146-5711269)
chr7 (16-139)||(22090023-22090148)
chr7 (16-139)||(5686406-5686529)
chr7 (16-139)||(6877176-6877299)
chr7 (16-139)||(26699013-26699139)
chr7 (39-150)||(466887-466999)
chr7 (39-139)||(2715527-2715627)
chr7 (40-139)||(9434136-9434234)
chr7 (16-139)||(11096912-11097038)
chr7 (16-139)||(24735629-24735755)
chr7 (16-139)||(26400020-26400146)
chr7 (16-139)||(1988433-1988558)
chr7 (39-139)||(42866746-42866846)
chr7 (49-139)||(8012025-8012115)
chr7 (54-139)||(9086170-9086256)
chr7 (54-139)||(40051985-40052071)
chr7 (52-139)||(9160669-9160758)
chr7 (52-120)||(332424-332492)
chr7 (52-132)||(15887562-15887643)
chr7 (52-126)||(21696125-21696198)
chr7 (52-126)||(22577331-22577404)
chr7 (52-132)||(25214657-25214737)
chr7 (52-139)||(15217267-15217354)
chr7 (70-117)||(13259946-13259993)
chr7 (52-126)||(13031396-13031469)
chr7 (52-132)||(18420090-18420170)
chr7 (70-126)||(16315889-16315945)
chr7 (52-118)||(4428368-4428434)
chr7 (70-124)||(13137240-13137294)
chr7 (70-119)||(4822223-4822272)
chr7 (52-116)||(12173645-12173708)
chr7 (70-126)||(13649533-13649589)
chr7 (70-118)||(14427305-14427353)
chr7 (73-118)||(9709183-9709228)
chr7 (52-110)||(2264858-2264915)
chr7 (16-65)||(9434085-9434135)
[»] chr6 (45 HSPs)
chr6 (16-138)||(25590043-25590166)
chr6 (16-139)||(34817040-34817165)
chr6 (16-138)||(32971796-32971920)
chr6 (23-139)||(7669656-7669772)
chr6 (16-150)||(27373625-27373758)
chr6 (16-139)||(25788541-25788664)
chr6 (16-139)||(12855804-12855926)
chr6 (16-139)||(26865611-26865737)
chr6 (16-150)||(27463977-27464111)
chr6 (16-139)||(12726696-12726821)
chr6 (16-139)||(27342593-27342718)
chr6 (16-139)||(27403333-27403458)
chr6 (16-139)||(17981767-17981893)
chr6 (16-139)||(17983956-17984082)
chr6 (16-139)||(32310931-32311057)
chr6 (16-139)||(3662205-3662332)
chr6 (42-139)||(4631749-4631846)
chr6 (19-139)||(9122377-9122497)
chr6 (42-139)||(27385275-27385372)
chr6 (42-139)||(27475688-27475785)
chr6 (16-139)||(26026282-26026408)
chr6 (16-133)||(16931256-16931376)
chr6 (52-139)||(25794778-25794867)
chr6 (52-139)||(20059717-20059808)
chr6 (52-139)||(12359011-12359099)
chr6 (52-118)||(17782020-17782085)
chr6 (52-118)||(19461211-19461276)
chr6 (52-118)||(21625878-21625943)
chr6 (52-120)||(20112013-20112080)
chr6 (52-139)||(25685902-25685989)
chr6 (52-132)||(13913955-13914035)
chr6 (70-111)||(19483575-19483616)
chr6 (70-118)||(22802914-22802962)
chr6 (52-118)||(11236432-11236496)
chr6 (67-110)||(14069368-14069411)
chr6 (52-126)||(13602932-13603005)
chr6 (53-118)||(18543863-18543926)
chr6 (52-110)||(19288587-19288644)
chr6 (52-128)||(25734719-25734795)
chr6 (70-111)||(16878011-16878052)
chr6 (70-119)||(18379008-18379057)
chr6 (71-118)||(21235724-21235771)
chr6 (16-76)||(27342518-27342580)
chr6 (16-76)||(27403258-27403320)
chr6 (52-117)||(17043584-17043648)
[»] chr4 (29 HSPs)
chr4 (39-150)||(451495-451606)
chr4 (39-150)||(30936301-30936412)
chr4 (16-139)||(16256762-16256887)
chr4 (16-139)||(24641175-24641300)
chr4 (39-150)||(21997337-21997448)
chr4 (29-139)||(40469832-40469940)
chr4 (42-139)||(18762334-18762431)
chr4 (16-139)||(17918945-17919065)
chr4 (16-139)||(19954248-19954371)
chr4 (16-139)||(24027331-24027451)
chr4 (16-139)||(55755095-55755221)
chr4 (16-139)||(10750389-10750516)
chr4 (16-139)||(10964158-10964285)
chr4 (16-139)||(36019228-36019354)
chr4 (39-139)||(27657532-27657633)
chr4 (52-132)||(11516037-11516117)
chr4 (52-132)||(39520057-39520137)
chr4 (52-111)||(16818572-16818630)
chr4 (67-132)||(15206605-15206671)
chr4 (52-132)||(16306104-16306184)
chr4 (69-132)||(10291527-10291591)
chr4 (69-132)||(11536871-11536935)
chr4 (70-126)||(19620360-19620416)
chr4 (68-115)||(14777669-14777715)
chr4 (52-110)||(19571971-19572031)
chr4 (52-112)||(13004174-13004233)
chr4 (70-109)||(15474461-15474500)
chr4 (52-118)||(15140000-15140064)
chr4 (73-118)||(13575450-13575495)
[»] chr2 (33 HSPs)
chr2 (16-150)||(9907407-9907542)
chr2 (16-139)||(22959588-22959713)
chr2 (16-139)||(27222247-27222372)
chr2 (16-139)||(35253859-35253984)
chr2 (16-139)||(35264468-35264593)
chr2 (16-150)||(9772550-9772686)
chr2 (16-139)||(4210738-4210863)
chr2 (16-139)||(24337661-24337784)
chr2 (16-139)||(29245074-29245198)
chr2 (16-139)||(43083500-43083623)
chr2 (16-139)||(40223182-40223304)
chr2 (16-139)||(43346254-43346381)
chr2 (16-139)||(11404725-11404851)
chr2 (40-139)||(34803616-34803714)
chr2 (16-139)||(10267841-10267967)
chr2 (16-139)||(10278418-10278544)
chr2 (52-139)||(28731112-28731203)
chr2 (52-132)||(22764633-22764714)
chr2 (69-139)||(21171651-21171723)
chr2 (52-132)||(26867995-26868075)
chr2 (52-111)||(19312214-19312272)
chr2 (67-133)||(22751399-22751466)
chr2 (56-139)||(24424717-24424802)
chr2 (52-132)||(28379027-28379107)
chr2 (70-125)||(18937337-18937392)
chr2 (67-132)||(20416879-20416944)
chr2 (70-118)||(24813826-24813873)
chr2 (73-116)||(22454254-22454297)
chr2 (52-110)||(22318385-22318442)
chr2 (70-126)||(24377857-24377913)
chr2 (70-118)||(24849930-24849977)
chr2 (83-111)||(33241414-33241442)
chr2 (83-111)||(33249335-33249363)
[»] chr1 (30 HSPs)
chr1 (39-150)||(12731374-12731485)
chr1 (39-150)||(12741967-12742078)
chr1 (16-139)||(12623061-12623186)
chr1 (16-139)||(21864463-21864588)
chr1 (16-139)||(35400410-35400535)
chr1 (16-139)||(5649655-5649778)
chr1 (16-139)||(4168061-4168184)
chr1 (39-139)||(19179793-19179892)
chr1 (16-139)||(7508138-7508264)
chr1 (16-139)||(51655708-51655834)
chr1 (39-139)||(5834081-5834181)
chr1 (16-139)||(35647935-35648061)
chr1 (39-139)||(47617783-47617883)
chr1 (16-139)||(3172424-3172552)
chr1 (54-139)||(36246266-36246352)
chr1 (54-139)||(38095919-38096005)
chr1 (52-139)||(26561356-26561442)
chr1 (53-136)||(153518-153602)
chr1 (52-139)||(7680126-7680214)
chr1 (52-118)||(20883105-20883170)
chr1 (52-118)||(22643685-22643750)
chr1 (52-118)||(23067736-23067801)
chr1 (52-118)||(19169584-19169649)
chr1 (52-118)||(20255828-20255893)
chr1 (67-111)||(7744285-7744329)
chr1 (70-118)||(36134921-36134969)
chr1 (70-111)||(20953700-20953741)
chr1 (70-126)||(19718303-19718359)
chr1 (52-121)||(21134396-21134464)
chr1 (52-113)||(29216473-29216533)
[»] scaffold0105 (1 HSPs)
scaffold0105 (16-139)||(46848-46973)
[»] chr8 (40 HSPs)
chr8 (16-139)||(6151939-6152064)
chr8 (16-133)||(26112119-26112237)
chr8 (29-139)||(19129634-19129743)
chr8 (16-139)||(242707-242833)
chr8 (16-139)||(796077-796203)
chr8 (16-139)||(3358472-3358598)
chr8 (16-139)||(36078820-36078945)
chr8 (16-139)||(32087539-32087666)
chr8 (16-139)||(9342029-9342155)
chr8 (16-139)||(36293786-36293912)
chr8 (16-139)||(209423-209550)
chr8 (16-139)||(723046-723173)
chr8 (39-139)||(44482014-44482115)
chr8 (39-139)||(15779978-15780077)
chr8 (39-139)||(15790567-15790666)
chr8 (39-139)||(13687865-13687966)
chr8 (54-139)||(29077644-29077730)
chr8 (54-133)||(29087895-29087975)
chr8 (52-139)||(23468658-23468747)
chr8 (52-139)||(19225851-19225939)
chr8 (52-139)||(19419317-19419408)
chr8 (53-132)||(30324533-30324613)
chr8 (52-110)||(17518369-17518426)
chr8 (52-133)||(23371540-23371621)
chr8 (52-132)||(18154719-18154799)
chr8 (52-119)||(19927818-19927884)
chr8 (52-118)||(3597676-3597741)
chr8 (52-139)||(20258825-20258912)
chr8 (52-120)||(20381696-20381763)
chr8 (52-139)||(21045455-21045542)
chr8 (70-126)||(24647084-24647140)
chr8 (52-133)||(3833726-3833808)
chr8 (70-110)||(21289158-21289198)
chr8 (71-111)||(23784330-23784370)
chr8 (70-119)||(15335357-15335406)
chr8 (70-119)||(15424422-15424471)
chr8 (70-119)||(15515726-15515775)
chr8 (70-118)||(22663941-22663989)
chr8 (70-110)||(23184563-23184603)
chr8 (49-118)||(23352360-23352428)
[»] chr5 (45 HSPs)
chr5 (16-139)||(22156461-22156586)
chr5 (39-150)||(15994132-15994243)
chr5 (16-139)||(27604198-27604321)
chr5 (16-150)||(31843303-31843440)
chr5 (16-136)||(31447873-31447993)
chr5 (16-139)||(5291359-5291482)
chr5 (16-133)||(39361678-39361795)
chr5 (16-139)||(40400376-40400500)
chr5 (16-139)||(6985653-6985779)
chr5 (16-139)||(14039952-14040078)
chr5 (16-139)||(22685358-22685484)
chr5 (16-139)||(23371867-23371993)
chr5 (16-139)||(27469916-27470042)
chr5 (16-139)||(36583319-36583445)
chr5 (16-139)||(39491710-39491836)
chr5 (39-139)||(35225427-35225527)
chr5 (16-139)||(14558838-14558964)
chr5 (16-139)||(17728890-17729016)
chr5 (16-139)||(27043008-27043134)
chr5 (16-139)||(31358507-31358633)
chr5 (16-139)||(14447813-14447938)
chr5 (16-139)||(9345898-9346025)
chr5 (39-139)||(23706712-23706813)
chr5 (16-139)||(36697584-36697711)
chr5 (16-139)||(17617033-17617159)
chr5 (16-139)||(23306201-23306327)
chr5 (16-139)||(24817664-24817790)
chr5 (54-139)||(24588914-24589000)
chr5 (54-139)||(42052726-42052812)
chr5 (54-139)||(30228305-30228392)
chr5 (52-133)||(23405763-23405846)
chr5 (52-139)||(19477266-19477355)
chr5 (52-139)||(20561626-20561714)
chr5 (53-132)||(1110019-1110099)
chr5 (52-132)||(34061912-34061992)
chr5 (52-111)||(13523973-13524031)
chr5 (52-132)||(17447565-17447647)
chr5 (52-139)||(20797009-20797095)
chr5 (54-132)||(21415096-21415174)
chr5 (54-132)||(21519393-21519471)
chr5 (52-139)||(24927013-24927105)
chr5 (70-126)||(88746-88802)
chr5 (52-124)||(23479148-23479219)
chr5 (52-113)||(21660967-21661029)
chr5 (70-118)||(30743802-30743850)
[»] scaffold0906 (2 HSPs)
scaffold0906 (34-139)||(3782-3887)
scaffold0906 (174-214)||(3698-3738)
[»] scaffold0133 (1 HSPs)
scaffold0133 (16-139)||(31987-32113)
[»] scaffold1216 (1 HSPs)
scaffold1216 (69-139)||(6-76)
[»] scaffold0199 (1 HSPs)
scaffold0199 (54-132)||(23526-23603)
[»] scaffold0022 (1 HSPs)
scaffold0022 (53-136)||(52768-52852)
[»] scaffold1002 (1 HSPs)
scaffold1002 (52-132)||(3154-3235)
[»] scaffold0454 (1 HSPs)
scaffold0454 (74-139)||(2189-2255)
[»] scaffold0016 (1 HSPs)
scaffold0016 (52-139)||(192891-192979)
[»] scaffold0269 (1 HSPs)
scaffold0269 (52-113)||(8092-8153)
[»] scaffold0411 (2 HSPs)
scaffold0411 (49-132)||(2355-2438)
scaffold0411 (49-132)||(6386-6469)
[»] scaffold0410 (1 HSPs)
scaffold0410 (52-139)||(7514-7601)
[»] scaffold0012 (2 HSPs)
scaffold0012 (52-139)||(128605-128692)
scaffold0012 (52-132)||(20966-21046)
[»] scaffold0398 (2 HSPs)
scaffold0398 (52-139)||(3610-3698)
scaffold0398 (52-139)||(11865-11953)
[»] scaffold0297 (1 HSPs)
scaffold0297 (52-118)||(17767-17832)
[»] scaffold0185 (1 HSPs)
scaffold0185 (52-118)||(10094-10159)
[»] scaffold0073 (1 HSPs)
scaffold0073 (52-118)||(59254-59319)
[»] scaffold0195 (1 HSPs)
scaffold0195 (52-132)||(30723-30803)
[»] scaffold0040 (2 HSPs)
scaffold0040 (52-132)||(70561-70641)
scaffold0040 (52-112)||(778-837)
[»] scaffold0014 (2 HSPs)
scaffold0014 (52-132)||(211502-211582)
scaffold0014 (52-132)||(217371-217451)
[»] scaffold0739 (1 HSPs)
scaffold0739 (52-139)||(3009-3096)
[»] scaffold0080 (1 HSPs)
scaffold0080 (52-116)||(91-154)
[»] scaffold0063 (1 HSPs)
scaffold0063 (52-139)||(15831-15918)
[»] scaffold0752 (1 HSPs)
scaffold0752 (52-111)||(2801-2859)
[»] scaffold0547 (1 HSPs)
scaffold0547 (52-111)||(1667-1725)
[»] scaffold0382 (1 HSPs)
scaffold0382 (47-110)||(10547-10609)
[»] scaffold0028 (1 HSPs)
scaffold0028 (52-118)||(4892-4959)
[»] scaffold1260 (1 HSPs)
scaffold1260 (52-118)||(2083-2148)
[»] scaffold0537 (1 HSPs)
scaffold0537 (52-118)||(3953-4018)
[»] scaffold0414 (1 HSPs)
scaffold0414 (52-118)||(6400-6465)
[»] scaffold0017 (2 HSPs)
scaffold0017 (52-133)||(176296-176377)
scaffold0017 (68-111)||(53104-53147)
[»] scaffold0011 (1 HSPs)
scaffold0011 (52-118)||(134657-134722)
[»] scaffold0670 (1 HSPs)
scaffold0670 (52-132)||(3427-3507)
[»] scaffold0497 (2 HSPs)
scaffold0497 (52-132)||(3177-3257)
scaffold0497 (52-132)||(9500-9580)
[»] scaffold0315 (1 HSPs)
scaffold0315 (52-116)||(18692-18755)
[»] scaffold0099 (1 HSPs)
scaffold0099 (52-111)||(16121-16181)
[»] scaffold0056 (1 HSPs)
scaffold0056 (52-116)||(34077-34140)
[»] scaffold0207 (1 HSPs)
scaffold0207 (71-118)||(21441-21488)
[»] scaffold0203 (1 HSPs)
scaffold0203 (52-111)||(23393-23451)
[»] scaffold0005 (1 HSPs)
scaffold0005 (68-115)||(62015-62061)
[»] scaffold1948 (1 HSPs)
scaffold1948 (68-118)||(222-272)
[»] scaffold0426 (1 HSPs)
scaffold0426 (52-126)||(14390-14463)
[»] scaffold0066 (1 HSPs)
scaffold0066 (52-126)||(60145-60218)
[»] scaffold0004 (1 HSPs)
scaffold0004 (52-110)||(30148-30205)
[»] scaffold0435 (1 HSPs)
scaffold0435 (70-119)||(4587-4636)
[»] scaffold0146 (1 HSPs)
scaffold0146 (54-111)||(25545-25602)
[»] scaffold0607 (1 HSPs)
scaffold0607 (70-118)||(7715-7763)
[»] scaffold0272 (1 HSPs)
scaffold0272 (67-111)||(12533-12577)
[»] scaffold0173 (1 HSPs)
scaffold0173 (52-112)||(24633-24692)
[»] scaffold0132 (1 HSPs)
scaffold0132 (54-118)||(24237-24300)
[»] scaffold0018 (1 HSPs)
scaffold0018 (70-118)||(5770-5817)
[»] scaffold0007 (2 HSPs)
scaffold0007 (67-107)||(58574-58614)
scaffold0007 (70-118)||(143888-143935)
[»] scaffold0069 (1 HSPs)
scaffold0069 (70-117)||(3866-3913)
[»] scaffold0738 (1 HSPs)
scaffold0738 (68-110)||(3930-3972)
[»] scaffold0544 (1 HSPs)
scaffold0544 (52-110)||(9159-9216)
[»] scaffold0273 (1 HSPs)
scaffold0273 (70-112)||(11319-11361)
[»] scaffold0177 (1 HSPs)
scaffold0177 (52-113)||(19686-19748)
[»] scaffold0176 (1 HSPs)
scaffold0176 (52-118)||(9965-10030)
[»] scaffold0261 (1 HSPs)
scaffold0261 (70-111)||(4071-4112)
[»] scaffold0395 (1 HSPs)
scaffold0395 (70-126)||(12796-12852)
[»] scaffold0387 (1 HSPs)
scaffold0387 (52-108)||(8175-8230)
[»] scaffold0249 (1 HSPs)
scaffold0249 (70-118)||(17035-17083)
[»] scaffold0151 (1 HSPs)
scaffold0151 (52-111)||(12183-12242)
[»] scaffold0422 (1 HSPs)
scaffold0422 (71-110)||(12544-12583)
[»] scaffold0334 (1 HSPs)
scaffold0334 (76-120)||(10521-10565)


Alignment Details
Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 6500358 - 6500221
Alignment:
Q  14 acatcagaagtatttaaaa-ggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6500358 acatcagaagtatttaaaaaggttttgaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 6500259  T
Q  113 ataaaaacaaaagaaagagtagcagagtttataaacat 150  Q
    |||| ||||||||||||||| ||||||  |||||||||    
T  6500258 ataagaacaaaagaaagagttgcagagcatataaacat 6500221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 9993295 - 9993157
Alignment:
Q  14 acatcagaagtatttaaaa--ggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||||||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9993295 acatcagaagtatttaaaaatggttttgaagaggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 9993196  T
Q  112 aataaaaacaaaagaaagagtagcagagtttataaacat 150  Q
    ||||| ||||||||||||||||||||||  |||||||||    
T  9993195 aataagaacaaaagaaagagtagcagagcatataaacat 9993157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 10654638 - 10654503
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  10654638 atcagaagtatttaaaaggttttgaagtggttatagtggggctcagtgcattaaaaaatactatacatttactctcccttttgtcatcaacaaaaagaat 10654539  T
Q  115 aaaaacaaaagaaagagtagcagagtttataaacat 150  Q
    |||||||||||||||||||||||||  |||||||||    
T  10654538 aaaaacaaaagaaagagtagcagagcatataaacat 10654503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 29 - 148
Target Start/End: Complemental strand, 12248789 - 12248670
Alignment:
Q  29 aaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaa 128  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12248789 aaaaggttttgaagtggttatagtggggctcagtgccttaaaaatattatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaa 12248690  T
Q  129 gagtagcagagtttataaac 148  Q
    |||||||||||  |||||||    
T  12248689 gagtagcagagcatataaac 12248670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 16390916 - 16390782
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  16390916 atcagaagtatttaaaaagttttgaagtggttatagtggggctcagtgccttagaa-tactatacatttactcccccttttgtcatcaacaaaaagaata 16390818  T
Q  116 -aaaacaaaagaaagagtagcagagtttataaacat 150  Q
     ||||||||||||||||||||||||  |||||||||    
T  16390817 aaaaacaaaagaaagagtagcagagcatataaacat 16390782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 14466464 - 14466589
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14466464 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 14466563  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  14466564 tagaaacaaaagaaagagtatcagag 14466589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 20683142 - 20683017
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20683142 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 20683043  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  20683042 tagaaacaaaagaaagagtatcagag 20683017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 38195616 - 38195741
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38195616 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 38195715  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  38195716 taagaacaaaagacagagtagcagag 38195741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 13122535 - 13122660
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||| ||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13122535 atcagaagtctttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 13122634  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  13122635 tagaaacaaaagaaagagtatcagag 13122660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 28324193 - 28324068
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28324193 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 28324094  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||| ||||    
T  28324093 taagaacaaaagacagagtagtagag 28324068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 37867320 - 37867445
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37867320 atcagaagtatttaaaagaaatttagaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaaaa 37867419  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||||| |||||    
T  37867420 taaaaacaaaagaaagagtatcagag 37867445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 39372945 - 39373070
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39372945 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaattactatacatttactcccccttttgtcatcaacaaaaagaa 39373044  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  39373045 taagaacaaaagacagagtagcagag 39373070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 19779260 - 19779386
Alignment:
Q  16 atcagaagtatttaaaag--gttttgaagtggttgtagtggggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||||||||||||||   |||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  19779260 atcagaagtatttaaaaaaagtttagaagtggttatagtggggctcagtgccttaaaaaatactatccatttactcccccttttgtcatcaacaaaaaga 19779359  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||||| |||||    
T  19779360 ataaaaacaaaagaaagagtatcagag 19779386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 5511568 - 5511694
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5511568 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 5511667  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  5511668 atagaaacaaaagaaagagtatcagag 5511694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 5627362 - 5627236
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5627362 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 5627263  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  5627262 atagaaacaaaagaaagagtatcagag 5627236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 20721986 - 20722112
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20721986 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 20722085  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  20722086 atagaaacaaaagaaagagtatcagag 20722112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 23758172 - 23758320
Alignment:
Q  16 atcagaagtatttaaaaggtttt-gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||| |||| | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23758172 atcagaagtattaaaaaagatttagaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtgatcaacaaaaagaat 23758271  T
Q  115 ----aaaaacaaaagaaagagtagcagagtttataaacattcaaacaat 159  Q
        |||||| ||||||||||||||||||  |||||||||  |||||||    
T  23758272 aaaaaaaaaccaaagaaagagtagcagagcatataaacatataaacaat 23758320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 4744611 - 4744738
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa--atactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  4744611 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaaatactatacatttactcccccttttgtcatcaacaaaaag 4744710  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  4744711 aatagaaacaaaagaaagagtatcagag 4744738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 5546968 - 5546841
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaa--tactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  5546968 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaaatactatacatttactcccccttttgtcatcaacaaaaag 5546869  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  5546868 aatagaaacaaaagaaagagtatcagag 5546841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 6220061 - 6219938
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||| ||||||||||||  |||| | ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  6220061 atcataagtatttaaaaaagtttaggagtggttatagtggggctcagtgccttaaaa-tgctatacatttactcccccttttgtcatcaacaaaaagaat 6219963  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  6219962 aaaaacaaaagaaagagtatcagag 6219938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 13382596 - 13382497
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13382596 gaagtggttatagtagggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcaga 13382498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 13393190 - 13393091
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13393190 gaagtggttatagtagggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcaga 13393092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 18484961 - 18485061
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18484961 gaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcaga 18485060  T
Q  139 g 139  Q
    |    
T  18485061 g 18485061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 5875640 - 5875514
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5875640 atcagaagtatttaaaagaaatttagaagtggttatagcagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 5875541  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  5875540 atagaaacaaaagaaagagtatcagag 5875514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 16477176 - 16477277
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcag 137  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  16477176 gaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcag 16477275  T
Q  138 ag 139  Q
    ||    
T  16477276 ag 16477277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 8775592 - 8775692
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  8775592 gaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagagtaagaacaaaagacagagtagcaga 8775691  T
Q  139 g 139  Q
    |    
T  8775692 g 8775692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 24660791 - 24660918
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacattt-actcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  24660791 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacattttactcccccttttgtcatcaacaaaaag 24660890  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  24660891 aatagaaacaaaagaaagagtatcagag 24660918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 12296163 - 12296037
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||| |||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12296163 atcagaagtatttaaaagaaatttagaagaggttatagtaggactcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 12296064  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  12296063 atagaaacaaaagaaagagtatcagag 12296037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 41684551 - 41684677
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||| |||| |||| || ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  41684551 atcagaagtatttaaaagaaatttagaagaggttatagtaggactcagtgccttaacaaatactatacatttacttccccttttgtcatcaacaaaaaga 41684650  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  41684651 atagaaacaaaagaaagagtatcagag 41684677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 9390515 - 9390427
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  9390515 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 9390427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 4405260 - 4405341
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  4405260 tggggctcagagcctaaaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 4405341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 29905428 - 29905340
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| || |||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||    
T  29905428 tggggctcagagcctaaataatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagtatcagag 29905340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 29946593 - 29946506
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||    
T  29946593 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagtatcagag 29946506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 29995747 - 29995660
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||    
T  29995747 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagtatcagag 29995660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 13120758 - 13120809
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13120758 taaaaatactatacatttactcccccttttgtcatcaacaaaaagtataaaa 13120809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 7803815 - 7803723
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag------aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||      || ||||||||||||||||||| |||||    
T  7803815 tggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaagaaaaacaaaagaaagagtatcagag 7803723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 17909312 - 17909220
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag------aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||      || ||||||||||||||||||| |||||    
T  17909312 tggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaagaaaaacaaaagaaagagtatcagag 17909220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 1054674 - 1054754
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  1054674 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 1054754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 1793781 - 1793701
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  1793781 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 1793701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 11215960 - 11215885
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaag---aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||  ||||||||||||||||||||||||||||   || ||||||||||||||||||| |||||    
T  11215960 taaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaaaaaaaaacaaaagaaagagtatcagag 11215885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 14320945 - 14320865
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  14320945 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 14320865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 15226207 - 15226127
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  15226207 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 15226127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 15661998 - 15661918
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  15661998 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 15661918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 16670419 - 16670338
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| || |||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  16670419 tggggctcagagcctaaataatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 16670338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 12962482 - 12962409
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | ||||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||    
T  12962482 tggggctcagagcct-ataaatactatacatctactcccccttttatcatcaacaaaaagtataaaaactaaaga 12962409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Original strand, 22141537 - 22141591
Alignment:
Q  65 cttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  22141537 cttataaatactatacatctactcccccttttgtcatcaacaaaaagtataaaaa 22141591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 9005754 - 9005674
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||  ||||||||| |||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  9005754 tggggctcatggccttaaaa-tactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 9005674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 9993149 - 9993071
Alignment:
Q  140 tttataaacattcaaacaatgtaccagggcaaata----ttaaaaacaataaatatcatcagagttaaaactgtagaac 214  Q
    |||| |||||| ||||||||||| ||| |||||||    |||||||||||||||||||| |||||||||||||||||||    
T  9993149 tttaaaaacatacaaacaatgtatcagagcaaataatcattaaaaacaataaatatcattagagttaaaactgtagaac 9993071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 15834288 - 15834336
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  15834288 aaatactatacatctactcccccttttgtcatcaacaaaaagtataaaa 15834336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 17962359 - 17962438
Alignment:
Q  54 gggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa---gaataaaaacaaaagaaagag 131  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||    || |||||||||||||||||    
T  17962359 gggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaaagtaaagaaaaacaaaagaaagag 17962438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 18007263 - 18007342
Alignment:
Q  54 gggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa---gaataaaaacaaaagaaagag 131  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||    || |||||||||||||||||    
T  18007263 gggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaaagtaaagaaaaacaaaagaaagag 18007342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 18140910 - 18140845
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  18140910 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaatagtataaaa 18140845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 52921183 - 52921255
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | |||||||||||||| |||||||||||| |||||||||||||| |||||||| |||||    
T  52921183 tggggctcagagcct-ataaatactatacatt-actcccccttttatcatcaacaaaaagtataaaaactaaaga 52921255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 14582178 - 14582258
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  || ||||||||||||||||||||||||| ||  ||||||||||| |||||    
T  14582178 tggggctcagagcct-aaaaatactatacaactaatcccccttttgtcatcaacaaaaagtaaataaaacaaaagacagagt 14582258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 6500179 - 6500139
Alignment:
Q  174 attaaaaacaataaatatcatcagagttaaaactgtagaac 214  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  6500179 attaaaaacaataaacatcatcagagttaaaactgtagaac 6500139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 18845523 - 18845446
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaag 129  Q
    |||||||||| |||| ||||||||||||||  |||| |||||||||||||||| |||||| ||  ||||||||||||||    
T  18845523 tggggctcagagcct-aaaaatactatacaactactaccccttttgtcatcaataaaaagtaaataaaacaaaagaaag 18845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 18850952 - 18850901
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaa 104  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  18850952 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaa 18850901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 16812524 - 16812598
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatt-tactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | |||||||| ||||  ||||||||||||||||||||||||||||  ||||||| |||||    
T  16812524 tggggctcagagcct-ataaatactacacatactactcccccttttgtcatcaacaaaaagtttaaaaactaaaga 16812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 49665769 - 49665712
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| | ||||||||||||| |||||||| |||||||||||||||||||    
T  49665769 tggggctcagagcct-ataaatactatacatctactcccc-ttttgtcatcaacaaaaag 49665712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 16658024 - 16657967
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| |||| | ||||||||||||| |||| ||||||||||||| ||||||||    
T  16658024 tggggctcagagcct-ataaatactatacatctacttccccttttgtcataaacaaaaa 16657967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 21318059 - 21318093
Alignment:
Q  84 tactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| |||||||||||||||||||||    
T  21318059 tactcccccttttatcatcaacaaaaagaataaaa 21318093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 204
Target Start/End: Original strand, 37876015 - 37876045
Alignment:
Q  174 attaaaaacaataaatatcatcagagttaaa 204  Q
    |||||||||||||||||||||||||||||||    
T  37876015 attaaaaacaataaatatcatcagagttaaa 37876045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 30053618 - 30053577
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||| |||||| |||||| |||||||||||||||||||||    
T  30053618 aaatacgatacatctactcctccttttgtcatcaacaaaaag 30053577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 12248636 - 12248596
Alignment:
Q  174 attaaaaacaataaatatcatcagagttaaaactgtagaac 214  Q
    ||||||||||||||||||||||||| |||||| | ||||||    
T  12248636 attaaaaacaataaatatcatcagaattaaaagtatagaac 12248596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 19642955 - 19642919
Alignment:
Q  83 ttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    ||||||||||||||||||||||||||||  |||||||    
T  19642955 ttactcccccttttgtcatcaacaaaaattataaaaa 19642919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 19993449 - 19993330
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19993449 atcagaagtatttaaaaagttttgaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaata 19993351  T
Q  116 aaaacaaaagaaagagtagca 136  Q
    |||||||||||||||||||||    
T  19993350 aaaacaaaagaaagagtagca 19993330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 8618243 - 8618368
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8618243 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 8618342  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  8618343 tagaaacaaaagaaagagtatcagag 8618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 17960167 - 17960042
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17960167 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 17960068  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  17960067 tagaaacaaaagaaagagtatcagag 17960042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 167740 - 167865
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  167740 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgctttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 167839  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  167840 tagaaacaaaagaaagagtatcagag 167865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 4212869 - 4212994
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4212869 atcagaagtatttaaaagaaatttagaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 4212968  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  4212969 tagaaacaaaagaaagagtatcagag 4212994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 11006059 - 11006184
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11006059 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 11006158  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||| ||||    
T  11006159 taagaacaaaagacagagtagtagag 11006184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 21002446 - 21002329
Alignment:
Q  16 atcagaagtatttaaaa-ggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  21002446 atcagaagtatttaaaaaggttttgaagtggttatagtggggctcagtgcctttaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 21002348  T
Q  115 aaaaacaaaagaaagagta 133  Q
    |||||||||||||||||||    
T  21002347 aaaaacaaaagaaagagta 21002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 5711146 - 5711269
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5711146 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 5711244  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  5711245 aaaaacaaaagaaagagtatcagag 5711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 22090023 - 22090148
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22090023 atcagaagtatttaaaagaaatttagaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcgtcaacaaaaagaa 22090122  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  22090123 tagaaacaaaagaaagagtatcagag 22090148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 5686406 - 5686529
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5686406 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcggtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 5686504  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  5686505 aaaaacaaaagaaagagtatcagag 5686529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 6877299 - 6877176
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||| ||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6877299 atcataagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 6877201  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  6877200 aaaaacaaaagaaagagtatcagag 6877176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 26699139 - 26699013
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaa-tactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26699139 atcagaagtatttaaaagaaatttagaagtggttgtagtagggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 26699040  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  26699039 atagaaacaaaagaaagagtatcagag 26699013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 466999 - 466887
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcag 137  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  466999 gaagtggttatagcggggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaa 466900  T
Q  138 agtttataaacat 150  Q
    ||  |||||||||    
T  466899 agcatataaacat 466887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 2715627 - 2715527
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    |||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2715627 gaagaggttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcaga 2715528  T
Q  139 g 139  Q
    |    
T  2715527 g 2715527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 9434136 - 9434234
Alignment:
Q  40 aagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9434136 aagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcagag 9434234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 11096912 - 11097038
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11096912 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 11097011  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  11097012 atagaaacaaaagaaagagtatcagag 11097038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 24735629 - 24735755
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24735629 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 24735728  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  24735729 atagaaacaaaagaaagagtatcagag 24735755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 26400146 - 26400020
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26400146 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 26400047  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  26400046 atagaaacaaaagaaagagtatcagag 26400020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 1988433 - 1988558
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   | | ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1988433 atcagaagtatttaaaagaaatgtagaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 1988532  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  1988533 tagaaacaaaagaaagagtatcagag 1988558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 42866746 - 42866846
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  42866746 gaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcaga 42866845  T
Q  139 g 139  Q
    |    
T  42866846 g 42866846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 49 - 139
Target Start/End: Complemental strand, 8012115 - 8012025
Alignment:
Q  49 tagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  8012115 tagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 8012025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 9086170 - 9086256
Alignment:
Q  54 gggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9086170 gggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 9086256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 40052071 - 40051985
Alignment:
Q  54 gggctcagtgccttaaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  40052071 gggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 40051985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 9160669 - 9160758
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  9160669 tggggctcagagccttgaaaatactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 9160758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 332424 - 332492
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaac 120  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  332424 tggggctcagagccttataaatactatacatctactcccccttttgtcatcaacaaaaagtataaaaac 332492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 15887643 - 15887562
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagt 132  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  15887643 tggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagt 15887562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 21696125 - 21696198
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  21696125 tggggctcagagcct-ataaatactatacatatactcccccttttgtcatcaacaaaaagtataaaaactaaaga 21696198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 22577404 - 22577331
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  22577404 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaagtataaaaactaaaga 22577331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 25214737 - 25214657
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  25214737 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 25214657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 15217267 - 15217354
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaac-aaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||| ||||| ||  |||||||||||||||||| |||||    
T  15217267 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaaataaataaaacaaaagaaagagtatcagag 15217354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 13259993 - 13259946
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaa 117  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13259993 aaatactatacatctactcccccttttgtcatcaacaaaaagaataaa 13259946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 13031469 - 13031396
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | ||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  13031469 tggggctcagagcct-ataaatactatacatctactccctcttttgtcatcaacaaaaagtataaaaactaaaga 13031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 18420090 - 18420170
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||  | |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  18420090 tggggctcagagcct-aaaaatactatatttctactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 18420170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 16315945 - 16315889
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||||||||||| | |||||||||||||||||||||||||| |||||||| |||||    
T  16315945 aaatactatacatctcctcccccttttgtcatcaacaaaaagtataaaaactaaaga 16315889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 4428434 - 4428368
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| ||||  | |||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  4428434 tggggctcagagcctatacaatactatacatctactccccattttgtcatcaacaaaaagtataaaa 4428368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 13137294 - 13137240
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaa 124  Q
    ||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||    
T  13137294 aaatactatacatctactcccccttttgtcatcaataaaaagtaaaaaaacaaaa 13137240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 4822223 - 4822272
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  4822223 aaatactatacatctactcccccttttgtcatcaacaaaaactataaaaa 4822272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 12173708 - 12173645
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataa 116  Q
    |||||||||| |||| | ||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  12173708 tggggctcagagcct-ataaatactatacatctactccccctattgtcatcaacaaaaagtataa 12173645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 13649533 - 13649589
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||||| ||||| |||||| ||||||||||||||||||||| |||||||| |||||    
T  13649533 aaatactctacatctactccgccttttgtcatcaacaaaaagtataaaaactaaaga 13649589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 14427305 - 14427353
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  14427305 aaatactatacatctactcccccttttgtcatgaacaaaaagtataaaa 14427353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 9709228 - 9709183
Alignment:
Q  73 tactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||    
T  9709228 tactatacaactactcccccttttgtcatcaacaaaaagtataaaa 9709183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 2264915 - 2264858
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| |||| | ||||| |||||||  ||||||||||||||||||||||||||    
T  2264915 tggggctcagagcct-ataaatattatacatcaactcccccttttgtcatcaacaaaaa 2264858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 9434085 - 9434135
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgcc 65  Q
    |||||||||||||||||  |||| ||||||||| |||||||||||||||||    
T  9434085 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgcc 9434135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 5e-52; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 25590043 - 25590166
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  25590043 atcagaagtatttaaaagcttttgaagtggttatagtggggctcagtgccttaaaaaatactatccatttactcccccttttgtcatcaacaaaaagaat 25590142  T
Q  115 aaaaacaaaagaaagagtagcaga 138  Q
    ||||||||||||||||||||||||    
T  25590143 aaaaacaaaagaaagagtagcaga 25590166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 34817165 - 34817040
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34817165 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 34817066  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  34817065 tagaaacaaaagaaagagtatcagag 34817040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 32971920 - 32971796
Alignment:
Q  16 atcagaagtatttaaaag--gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32971920 atcagaagtatttaaaagaagtttagaagaggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 32971821  T
Q  114 taaaaacaaaagaaagagtagcaga 138  Q
    || ||||||||||||||||| ||||    
T  32971820 tagaaacaaaagaaagagtatcaga 32971796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 7669772 - 7669656
Alignment:
Q  23 gtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaa 122  Q
    ||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7669772 gtattaaaaaagtttagaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaa 7669673  T
Q  123 aagaaagagtagcagag 139  Q
    ||||||||||| |||||    
T  7669672 aagaaagagtatcagag 7669656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 27373625 - 27373758
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    ||||||||||||||||| |||||||| ||||| || ||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  27373625 atcagaagtatttaaaaagttttgaaatggttataatggggctcagtgcattaaaa-tactatacatttactccctcttttgtcatcaacaaaaagaata 27373723  T
Q  116 aaaacaaaagaaagagtagcagagtttataaacat 150  Q
    ||||||||||||||||||||||||  |||||||||    
T  27373724 aaaacaaaagaaagagtagcagagcatataaacat 27373758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 25788541 - 25788664
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25788541 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 25788639  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  25788640 aaaaacaaaagaaagagtatcagag 25788664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 12855804 - 12855926
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    |||||||||||| ||||  ||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12855804 atcagaagtattaaaaaaatttagaagtggttatagtagggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaata 12855902  T
Q  116 aaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||| |||||    
T  12855903 aaaacaaaagaaagagtatcagag 12855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 26865611 - 26865737
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26865611 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 26865710  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||||| |||||    
T  26865711 ataaaaacaaaagaaagagtatcagag 26865737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 27463977 - 27464111
Alignment:
Q  16 atcagaagtatttaaaaggtttt-gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    ||||||||||||||||| ||||| ||| ||||| || ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  27463977 atcagaagtatttaaaaagtttttgaaatggttataatggggctcagtgcattaaaa-tactatacatttactccctcttttgtcatcaacaaaaagaat 27464075  T
Q  115 aaaaacaaaagaaagagtagcagagtttataaacat 150  Q
    |||||||||||||||||||||||||  |||||||||    
T  27464076 aaaaacaaaagaaagagtagcagagcatataaacat 27464111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 12726821 - 12726696
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||||||||||||| |   ||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12726821 atcagaagtatttaaaggaaatttagaagtggttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 12726722  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  12726721 tagaaacaaaagaaagagtatcagag 12726696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 27342593 - 27342718
Alignment:
Q  16 atcagaagtatttaaaag--gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||| |||||||||||  |||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27342593 atcagaggtatttaaaagaagtttagaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 27342692  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  27342693 tagaaacaaaagaaagagtatcagag 27342718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 27403333 - 27403458
Alignment:
Q  16 atcagaagtatttaaaag--gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||| |||||||||||  |||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27403333 atcagaggtatttaaaagaagtttagaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 27403432  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  27403433 tagaaacaaaagaaagagtatcagag 27403458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 17981893 - 17981767
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17981893 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 17981794  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  17981793 atagaaacaaaagaaagagtatcagag 17981767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 17984082 - 17983956
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17984082 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 17983983  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  17983982 atagaaacaaaagaaagagtatcagag 17983956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 32311057 - 32310931
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||| |||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32311057 atcagaggtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 32310958  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| |||||||||||||||||||||||    
T  32310957 atagaaacaaaagaaagagtagcagag 32310931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 3662205 - 3662332
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa--atactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  3662205 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaaatactatacatttactcccccttttgtcatcaacaaaaag 3662304  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  3662305 aatagaaacaaaagaaagagtatcagag 3662332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 4631749 - 4631846
Alignment:
Q  42 gtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  4631749 gtggttatagtggggctcagtgtcttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcagag 4631846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 9122497 - 9122377
Alignment:
Q  19 agaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaa 117  Q
    ||||||||||||||  |||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  9122497 agaagtatttaaaaaagtttagaagtggttatagttgggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataga 9122399  T
Q  118 aacaaaagaaagagtagcagag 139  Q
    |||||||||||||||| |||||    
T  9122398 aacaaaagaaagagtatcagag 9122377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 27385275 - 27385372
Alignment:
Q  42 gtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  27385275 gtggttatagtggggctcagtgtcttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcagag 27385372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 27475688 - 27475785
Alignment:
Q  42 gtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  27475688 gtggttatagtggggctcagtgtcttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcagag 27475785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 26026282 - 26026408
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26026282 atcagaagtatttaaaagaaatttagaagaggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 26026381  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  26026382 atagaaacaaaagaaagagtatcagag 26026408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 16931256 - 16931376
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||| ||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16931256 atcagaagtatttaagagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 16931355  T
Q  113 ataaaaacaaaagaaagagta 133  Q
    ||| |||||||||||||||||    
T  16931356 atagaaacaaaagaaagagta 16931376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 25794778 - 25794867
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  25794778 tggggctcagagccttaaaaataccatacaactactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 25794867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 20059808 - 20059717
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-----aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||     || ||||||||||||||||||| |||||    
T  20059808 tggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaaaaacaaaagaaagagtatcagag 20059717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 12359011 - 12359099
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||| |||| |||||    
T  12359011 tggggctcaaagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaaaagtatcagag 12359099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 17782020 - 17782085
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  17782020 tggggctcagagcct-aaaaatactatacacttactcccccttttgtcatcaacaaaaagtataaaa 17782085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 19461276 - 19461211
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  19461276 tggggctcagagcct-aaaaatactatacatttagtcccccttttgtcatcaacaaaaagtataaaa 19461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 21625878 - 21625943
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21625878 tgggactcagtgcct-ataaatactatacatttactcccccttttgtcatcaacaaaaagtataaaa 21625943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 20112080 - 20112013
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaac 120  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  20112080 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaagtataaaaac 20112013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 25685989 - 25685902
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||| | ||  |||||||||||||||||| |||||    
T  25685989 tggggctcagagcct-aaaaatactatacagctactcccccttttgtcatcaacaaaacgtaaataaaacaaaagaaagagtatcagag 25685902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 13913955 - 13914035
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||| ||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  13913955 tggggctcagagcct-aaaaatactgtacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 13914035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 19483575 - 19483616
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19483575 aaatactatacatttactcccccttttgtcatcaacaaaaag 19483616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 22802914 - 22802962
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  22802914 aaatactatacatctactcccccttttgtcatcaacaaaaagtataaaa 22802962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 11236432 - 11236496
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| ||||  ||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  11236432 tggggctcagagcct--aaaatactatacacttactccccctttggtcatcaacaaaaagtataaaa 11236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 14069411 - 14069368
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14069411 taaaaatactatacaattactcccccttttgtcatcaacaaaaa 14069368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 13602932 - 13603005
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | ||||||||||||| |||||||| ||||||||||||||||||  |||||||| |||||    
T  13602932 tggggctcagagcct-ataaatactatacatctactcccctttttgtcatcaacaaaaaatataaaaactaaaga 13603005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 18543863 - 18543926
Alignment:
Q  53 ggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||| ||||  ||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  18543863 ggggctcagagcct--aaaatactatacacttactcccccttttatcatcaacaaaaagtataaaa 18543926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 19288644 - 19288587
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  19288644 tggggctcagagcct-aaaaatattatacaattactcccccttttgtcatcaacaaaaa 19288587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 25734795 - 25734719
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaa 128  Q
    |||||||||| |||| |||||||||||||   |||||||||||||||||||||||||||| ||  |||||||||||||    
T  25734795 tggggctcagggcct-aaaaatactatactactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaa 25734719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 16878011 - 16878052
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  16878011 aaatactatacatctgctcccccttttgtcatcaacaaaaag 16878052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 18379008 - 18379057
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    ||||||||||||| |||| ||||||||||||||||||||||  |||||||    
T  18379008 aaatactatacatatacttccccttttgtcatcaacaaaaaatataaaaa 18379057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 21235724 - 21235771
Alignment:
Q  71 aatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||| |||||| |||| ||||||||||||||||||||||| ||||||    
T  21235724 aatacaatacatctactaccccttttgtcatcaacaaaaagtataaaa 21235771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 27342518 - 27342580
Alignment:
Q  16 atcagaagtatttaaaag--gttttgaagtggttgtagtggggctcagtgccttaaaaatact 76  Q
    |||||| |||||||||||  |||| ||||| ||| |||| |||||||||||||||||||||||    
T  27342518 atcagaggtatttaaaagaagtttagaagttgttatagtagggctcagtgccttaaaaatact 27342580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 27403258 - 27403320
Alignment:
Q  16 atcagaagtatttaaaag--gttttgaagtggttgtagtggggctcagtgccttaaaaatact 76  Q
    |||||| |||||||||||  |||| ||||| ||| |||| |||||||||||||||||||||||    
T  27403258 atcagaggtatttaaaagaagtttagaagttgttatagtagggctcagtgccttaaaaatact 27403320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 17043584 - 17043648
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaa 117  Q
    |||||||||| |||| ||||||| ||||||  ||||||||| ||| ||||||||||||| ||||||    
T  17043584 tggggctcagagcct-aaaaatattatacaactactcccccctttatcatcaacaaaaaaaataaa 17043648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 451495 - 451606
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  451495 gaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 451594  T
Q  139 gtttataaacat 150  Q
    |  |||||||||    
T  451595 gcatataaacat 451606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 150
Target Start/End: Complemental strand, 30936412 - 30936301
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30936412 gaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 30936313  T
Q  139 gtttataaacat 150  Q
    |  |||||||||    
T  30936312 gcatataaacat 30936301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 16256762 - 16256887
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16256762 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 16256861  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  16256862 tagaaacaaaagaaagagtatcagag 16256887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 24641175 - 24641300
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24641175 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 24641274  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  24641275 taagaacaaaagacagagtagcagag 24641300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 21997337 - 21997448
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21997337 gaagaggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagtaga 21997436  T
Q  139 gtttataaacat 150  Q
    |  |||||||||    
T  21997437 gcatataaacat 21997448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 40469940 - 40469832
Alignment:
Q  29 aaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaa 128  Q
    |||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40469940 aaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaa-aataaaaacaaaagaaa 40469843  T
Q  129 gagtagcagag 139  Q
    |||||||||||    
T  40469842 gagtagcagag 40469832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 18762431 - 18762334
Alignment:
Q  42 gtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  18762431 gtggttatagtggggctcagtgtcttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcagag 18762334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 17918945 - 17919065
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    |||||||||||| ||||  ||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17918945 atcagaagtattaaaaa--tttagaagaggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaata 17919041  T
Q  116 aaaacaaaagaaagagtagcagag 139  Q
     ||||||||||||||||| |||||    
T  17919042 gaaacaaaagaaagagtatcagag 17919065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 19954371 - 19954248
Alignment:
Q  16 atcagaagtatttaaaaggtttt-gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||   ||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  19954371 atcagaagtatttaaaaaaatttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttattcccccttttgtcattaacaaaaagaat 19954273  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  19954272 aaaaacaaaagaaagagtatcagag 19954248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 24027451 - 24027331
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    |||||||||||| ||||  ||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  24027451 atcagaagtattaaaaa--tttagaagaggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaataaaaagaata 24027355  T
Q  116 aaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||| |||||    
T  24027354 aaaacaaaagaaagagtatcagag 24027331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 55755221 - 55755095
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  55755221 atcagaagtatttaaaagaaatttagaagtggttatagcagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 55755122  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  55755121 atagaaacaaaagaaagagtatcagag 55755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 10750516 - 10750389
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacattt-actcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  10750516 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacattttactcccccttttgtcatcaacaaaaag 10750417  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  10750416 aatagaaacaaaagaaagagtatcagag 10750389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 10964285 - 10964158
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacattt-actcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  10964285 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacattttactcccccttttgtcatcaacaaaaag 10964186  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  10964185 aatagaaacaaaagaaagagtatcagag 10964158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 36019228 - 36019354
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||| |||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36019228 atcagaagtatttaaaagaaatttagaagaggttatagtaggactcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 36019327  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  36019328 atagaaacaaaagaaagagtatcagag 36019354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 27657532 - 27657633
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaac-aaaaagaataaaaacaaaagaaagagtagcag 137  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  27657532 gaagtggttatagcagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaagaataagaacaaaagacagagtagcag 27657631  T
Q  138 ag 139  Q
    ||    
T  27657632 ag 27657633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 11516037 - 11516117
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  11516037 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 11516117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 39520137 - 39520057
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  39520137 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 39520057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 16818630 - 16818572
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  16818630 tggggctcagagcct-aaaaatactatacacttactcccccttttgtcatcaacaaaaag 16818572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 15206671 - 15206605
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  15206671 taaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 15206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 16306104 - 16306184
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||| | ||  |||||||||||||||||    
T  16306104 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaatgtaaacaaaacaaaagaaagagt 16306184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 10291527 - 10291591
Alignment:
Q  69 aaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  10291527 aaaatactatacaactactcccccttttgtcatcaacaaaaagtaaacaaaacaaaagaaagagt 10291591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 11536871 - 11536935
Alignment:
Q  69 aaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  11536871 aaaatactatacaactactcccccttttgtcatcaacaaaaagtaaacaaaacaaaagaaagagt 11536935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 19620416 - 19620360
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||| |||||    
T  19620416 aaatactatacatctactctcccttttgtcatcaacaaaaagtataaaaactaaaga 19620360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 14777715 - 14777669
Alignment:
Q  68 aaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  14777715 aaaaatactata-atttactcccccttttgtcatcaacaaaaagaata 14777669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 19571971 - 19572031
Alignment:
Q  52 tggggctcagtgcct--taaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| ||||  |||||||||||||||  |||||||||||||||||||||||||||    
T  19571971 tggggctcagagcctactaaaaatactatacaactactcccccttttgtcatcaacaaaaa 19572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 13004233 - 13004174
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||||||| |||| | ||||| ||||||| |||||||||||||||||||||||||||||    
T  13004233 tggggctcagagcct-ataaataatatacatctactcccccttttgtcatcaacaaaaaga 13004174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 15474500 - 15474461
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaa 109  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  15474500 aaatactatacatctactcccccttttgtcatcaacaaaa 15474461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 15140000 - 15140064
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| || ||| ||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  15140000 tggggctcagagc-ttataaatactatacatctactcccc-ttttgtcatcaacaaaaagtataaaa 15140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 13575495 - 13575450
Alignment:
Q  73 tactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||    
T  13575495 tactatacaactactcccccttttgtcatcaacaaaaagtataaaa 13575450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 9907542 - 9907407
Alignment:
Q  16 atcagaagtatttaaaaggtttt-gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||   ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9907542 atcagaagtatttaaaaaaatttagaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 9907443  T
Q  115 aaaaacaaaagaaagagtagcagagtttataaacat 150  Q
    ||||||||||||||||| || ||||| |||||||||    
T  9907442 aaaaacaaaagaaagagaagtagagtatataaacat 9907407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 22959713 - 22959588
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22959713 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 22959614  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  22959613 tagaaacaaaagaaagagtatcagag 22959588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 27222247 - 27222372
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27222247 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 27222346  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  27222347 taagaacaaaagacagagtagcagag 27222372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 35253859 - 35253984
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35253859 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 35253958  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  35253959 taagaacaaaagacagagtagcagag 35253984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 35264468 - 35264593
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35264468 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 35264567  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  35264568 taagaacaaaagacagagtagcagag 35264593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 9772686 - 9772550
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   | | |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9772686 atcagaagtatttaaaagaaatctagaagaggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 9772587  T
Q  114 taaaaacaaaagaaagagtagcagagtttataaacat 150  Q
    ||||||||||||||||||||||||||  |||||||||    
T  9772586 taaaaacaaaagaaagagtagcagagcatataaacat 9772550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 4210738 - 4210863
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4210738 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaaaa 4210837  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  4210838 tagaaacaaaagaaagagtatcagag 4210863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 24337784 - 24337661
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24337784 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 24337686  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  24337685 aaaaacaaaagaaagagtatcagag 24337661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 29245074 - 29245198
Alignment:
Q  16 atcagaagtatttaaaag--gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||||||||||||||   |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29245074 atcagaagtatttaaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaa 29245172  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||||| |||||    
T  29245173 taaaaacaaaagaaagagtatcagag 29245198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 43083500 - 43083623
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  43083500 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactctcccttttgtcatcaacaaaaagaat 43083598  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  43083599 aaaaacaaaagaaagagtatcagag 43083623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 40223182 - 40223304
Alignment:
Q  16 atcagaagtatttaaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    |||||||||||| ||||  ||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40223182 atcagaagtattaaaaaaatttagaagtggttatagtagggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaata 40223280  T
Q  116 aaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||| |||||    
T  40223281 aaaacaaaagaaagagtatcagag 40223304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 43346254 - 43346381
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa--atactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  43346254 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaaatactatacatttactcccccttttgtcatcaacaaaaag 43346353  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  43346354 aatagaaacaaaagaaagagtatcagag 43346381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 11404851 - 11404725
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11404851 atcagaagtatttaaaagaaatttagaagtggttatagcagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 11404752  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  11404751 atagaaacaaaagaaagagtatcagag 11404725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 34803714 - 34803616
Alignment:
Q  40 aagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34803714 aagtggttatagtagggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcagag 34803616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 10267841 - 10267967
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||||| |||||||||   ||| |||| |||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10267841 atcagaagaatttaaaagaaatttagaagaggttatagtaggactcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 10267940  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  10267941 atagaaacaaaagaaagagtatcagag 10267967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 10278418 - 10278544
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||||| |||||||||   ||| |||| |||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10278418 atcagaagaatttaaaagaaatttagaagaggttatagtaggactcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 10278517  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  10278518 atagaaacaaaagaaagagtatcagag 10278544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 28731203 - 28731112
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaa----aagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    ||| | ||||||||||||||||||| |||||    
T  28731203 tggggctcaaagccttaaaaatactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaaaacaaaagaaagagtatcagag 28731112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 22764633 - 22764714
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  22764633 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaaaaaaaacaaaagaaagagt 22764714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 21171723 - 21171651
Alignment:
Q  69 aaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||| ||||||||||||||||||||||||||||  | ||||| |||||||||||||| |||||    
T  21171723 aaaatactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaatcaaaagaaagagtatcagag 21171651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 26867995 - 26868075
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  26867995 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 26868075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 19312272 - 19312214
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  19312272 tggggctcagagcct-aaaaatactatacacttactcccccttttgtcatcaacaaaaag 19312214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 22751466 - 22751399
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagta 133  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  22751466 taaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagta 22751399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 24424802 - 24424717
Alignment:
Q  56 gctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||| |||||||||||||||||||  |||||||||||||||||| |||||||||  | |||||| | ||||||||||| |||||    
T  24424802 gctcagagccttaaaaatactatacaactactcccccttttgtcattaacaaaaagtaagtaaaaatagaagaaagagtatcagag 24424717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 28379107 - 28379027
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||| ||||||||||||||||||||||| ||  |||||||||||||||||    
T  28379107 tggggctcagagcct-aaaaatactatacaactacttccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 28379027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 18937337 - 18937392
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaag 125  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||||| ||||    
T  18937337 aaatactatacatctactcccccttttgtcatcaataaaaagtataaaaactaaag 18937392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 20416944 - 20416879
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  20416944 taaaaatactatacaat-actcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 20416879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 24813873 - 24813826
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  24813873 aaatactatacatttactcccc-ttttgtcatcaacaaaaagtataaaa 24813826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 22454297 - 22454254
Alignment:
Q  73 tactatacatttactcccccttttgtcatcaacaaaaagaataa 116  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  22454297 tactatacatctactcccccttttgtcatcaacaaaaagtataa 22454254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 22318385 - 22318442
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| |||| | ||||||||||||  |||||||||||||||||||||||||||    
T  22318385 tggggctcagagcct-ataaatactatacagctactcccccttttgtcatcaacaaaaa 22318442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 24377857 - 24377913
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||| ||||||| ||||||||||||| ||||||| |||||  |||||||| |||||    
T  24377857 aaatattatacatctactcccccttttatcatcaataaaaaatataaaaactaaaga 24377913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 24849977 - 24849930
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| |||||||||||||| ||||||||| ||| ||||||    
T  24849977 aaatactatacatctactcccccttttg-catcaacaacaagtataaaa 24849930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 33241414 - 33241442
Alignment:
Q  83 ttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  33241414 ttactcccccttttgtcatcaacaaaaag 33241442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 33249335 - 33249363
Alignment:
Q  83 ttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||||||||||||||||||||||    
T  33249335 ttactcccccttttgtcatcaacaaaaag 33249363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 12731374 - 12731485
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12731374 gaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 12731473  T
Q  139 gtttataaacat 150  Q
    |  |||||||||    
T  12731474 gcatataaacat 12731485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 12741967 - 12742078
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12741967 gaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 12742066  T
Q  139 gtttataaacat 150  Q
    |  |||||||||    
T  12742067 gcatataaacat 12742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 12623186 - 12623061
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||||| |||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12623186 atcagaagaatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 12623087  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  12623086 tagaaacaaaagaaagagtatcagag 12623061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 21864463 - 21864588
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21864463 atcagaagtatttaaaagaaatttagaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 21864562  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  21864563 tagaaacaaaagaaagagtatcagag 21864588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 35400535 - 35400410
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  35400535 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccacttttgtcatcaacaaaaagaa 35400436  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  35400435 taagaacaaaagacagagtagcagag 35400410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 5649778 - 5649655
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5649778 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 5649680  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  5649679 aaaaacaaaagaaagagtatcagag 5649655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 4168061 - 4168184
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  4168061 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtaatcaacaaaaagaat 4168159  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  4168160 aaaaacaaaagaaagagtatcagag 4168184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 19179793 - 19179892
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19179793 gaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcaga 19179891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 7508138 - 7508264
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7508138 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaataaatactatacatttactcccccttttgtcatcaacaaaaaga 7508237  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  7508238 atagaaacaaaagaaagagtatcagag 7508264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 51655834 - 51655708
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51655834 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 51655735  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  51655734 atagaaacaaaagaaagagtatcagag 51655708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 5834081 - 5834181
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  5834081 gaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcaga 5834180  T
Q  139 g 139  Q
    |    
T  5834181 g 5834181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 35648061 - 35647935
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaaca-aaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35648061 atcagaagtatttaaaagaaatttagaagtggttatagcagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaaga 35647962  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||| ||||||||||||    
T  35647961 ataagaacaaaagacagagtagcagag 35647935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 47617883 - 47617783
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  47617883 gaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagtaga 47617784  T
Q  139 g 139  Q
    |    
T  47617783 g 47617783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 3172424 - 3172552
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaac--aaaaa 110  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||    
T  3172424 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaaa 3172523  T
Q  111 gaataaaaacaaaagaaagagtagcagag 139  Q
    |||||| ||||||||| ||||||||||||    
T  3172524 gaataagaacaaaagacagagtagcagag 3172552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 36246352 - 36246266
Alignment:
Q  54 gggctcagtgccttaaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36246352 gggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 36246266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 38095919 - 38096005
Alignment:
Q  54 gggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  38095919 gggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 38096005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 26561356 - 26561442
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||  ||||||||| |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  26561356 tggggctcaaagccttaaaa-tactatacatctactcccacttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 26561442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 153602 - 153518
Alignment:
Q  53 ggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagca 136  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  153602 ggggctcagagccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagcagca 153518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 7680126 - 7680214
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  7680126 tggggctcagagccttaaaa-tgctatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 7680214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 20883170 - 20883105
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  20883170 tggggctcagagcct-aaaaagactatacatttactcccccttttgtcatcaacaaaaagtataaaa 20883105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 22643685 - 22643750
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  22643685 tggggctcagagcct-aaaaatattatacatttactcccccttttgtcatcaacaaaaagtataaaa 22643750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 23067736 - 23067801
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  23067736 tggggctcagagcct-aaaaatactatacaattactcccccttttgtcatcaacaaaaagtataaaa 23067801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 19169649 - 19169584
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  19169649 tggggctcagagcct-aaaaatactatacaattactcccccttttttcatcaacaaaaagtataaaa 19169584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 20255828 - 20255893
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  20255828 tggggctcagagcct-aaaaatacaatacatttattcccccttttgtcatcaacaaaaagtataaaa 20255893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 7744329 - 7744285
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  7744329 taaaaatactatacattcactcccccttttgtcatcaacaaaaag 7744285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 36134921 - 36134969
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  36134921 aaatactatacatctactcccccttttgtcatcaacaaaaagtataaaa 36134969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 20953741 - 20953700
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  20953741 aaatactatacatctactcccccttttgtcatcaacaaaaag 20953700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 19718303 - 19718359
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||||| ||||| |||||||| ||||||||||||||||||| |||||||| |||||    
T  19718303 aaatactgtacatctactccccattttgtcatcaacaaaaagtataaaaactaaaga 19718359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 21134464 - 21134396
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaaca 121  Q
    |||||||||| |||| | ||||||||||||  ||||||||||||||||||||| ||||||  ||||||||    
T  21134464 tggggctcagagcct-ataaatactatacaactactcccccttttgtcatcaataaaaagtgtaaaaaca 21134396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 29216473 - 29216533
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||||||| |||| | |||||| |||||| ||||||| ||||||||||||||||||||||    
T  29216473 tggggctcagagcct-ataaataccatacatctactccctcttttgtcatcaacaaaaagaa 29216533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 46973 - 46848
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46973 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 46874  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||| ||||||||||||    
T  46873 taagaacaaaagacagagtagcagag 46848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 6151939 - 6152064
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6151939 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 6152038  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  6152039 tagaaacaaaagaaagagtatcagag 6152064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 26112119 - 26112237
Alignment:
Q  16 atcagaagtatttaaa--aggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||  | |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26112119 atcagaagtatttaaacaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaa 26112217  T
Q  114 taaaaacaaaagaaagagta 133  Q
    ||||||||||||||||||||    
T  26112218 taaaaacaaaagaaagagta 26112237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 19129634 - 19129743
Alignment:
Q  29 aaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaa 128  Q
    |||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19129634 aaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaa 19129732  T
Q  129 gagtagcagag 139  Q
    ||||| |||||    
T  19129733 gagtatcagag 19129743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 242707 - 242833
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  242707 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 242806  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  242807 atagaaacaaaagaaagagtatcagag 242833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 796077 - 796203
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  796077 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 796176  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  796177 atagaaacaaaagaaagagtatcagag 796203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 3358598 - 3358472
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3358598 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 3358499  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  3358498 atagaaacaaaagaaagagtatcagag 3358472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 36078820 - 36078945
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   | | ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36078820 atcagaagtatttaaaagaaatgtagaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 36078919  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  36078920 tagaaacaaaagaaagagtatcagag 36078945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 32087666 - 32087539
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaa--tactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  32087666 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaaatactatacatttactcccccttttgtcatcaacaaaaag 32087567  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  32087566 aatagaaacaaaagaaagagtatcagag 32087539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 9342029 - 9342155
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  9342029 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgttatcaacaaaaaga 9342128  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  9342129 atagaaacaaaagaaagagtatcagag 9342155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 36293786 - 36293912
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  36293786 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactctcccttttgtcatcaacaaaaaga 36293885  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  36293886 atagaaacaaaagaaagagtatcagag 36293912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 209550 - 209423
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaa--tactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  209550 atcagaagtatttaaaagaaatttagaagtggttatagtagggctctgtgccttaaaaaaatactatacatttactcccccttttgtcatcaacaaaaag 209451  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  209450 aatagaaacaaaagaaagagtatcagag 209423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 723173 - 723046
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaa--tactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  723173 atcagaagtatttaaaagaaatttagaagtggttatagtagggctctgtgccttaaaaaaatactatacatttactcccccttttgtcatcaacaaaaag 723074  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  723073 aatagaaacaaaagaaagagtatcagag 723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 44482014 - 44482115
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcag 137  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  44482014 gaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcag 44482113  T
Q  138 ag 139  Q
    ||    
T  44482114 ag 44482115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 15780077 - 15779978
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15780077 gaagtggttatagtagggctcagtgccttaaaa-tactatacatttactccctcttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcaga 15779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 15790666 - 15790567
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  15790666 gaagtggttatagtagggctcagtgccttaaaa-tactatacatttactccctcttttgtcatcaacaaaaagaataaaaacaaaagaaagagtatcaga 15790568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 13687966 - 13687865
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaaca-aaaagaataaaaacaaaagaaagagtagcag 137  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  13687966 gaagtggttatagcagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaagaataagaacaaaagacagagtagcag 13687867  T
Q  138 ag 139  Q
    ||    
T  13687866 ag 13687865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 29077644 - 29077730
Alignment:
Q  54 gggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  29077644 gggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 29077730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 29087895 - 29087975
Alignment:
Q  54 gggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagta 133  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  29087895 gggctcagtgccttaaaaaatactatacatttactcccccttttgttattaacaaaaagaatagaaacaaaagaaagagta 29087975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 23468747 - 23468658
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  23468747 tggggctcagagccttaaaaatactatacaactactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtaacagag 23468658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 19225851 - 19225939
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  19225851 tggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 19225939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 19419317 - 19419408
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaa----aagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    ||| | ||||||||||||||||||| |||||    
T  19419317 tggggctcagagccttaaaaatactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaaaacaaaagaaagagtatcagag 19419408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 30324613 - 30324533
Alignment:
Q  53 ggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagt 132  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  30324613 ggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagt 30324533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 17518426 - 17518369
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  17518426 tggggctcagagcct-aaaaatactatacatttactcccccttttgtcatcaacaaaaa 17518369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 23371540 - 23371621
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagta 133  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  23371540 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaagtaaaacaaaagaaagagta 23371621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 18154719 - 18154799
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  18154719 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 18154799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 19927818 - 19927884
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    |||||||||| |||| | ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  19927818 tggggctcagagcct-ataaatactatgcatctactcccccttttgtcatcaacaaaaagaataaaaa 19927884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 3597741 - 3597676
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  3597741 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaagtataaaa 3597676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 20258912 - 20258825
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||||||||| |||||| ||  |||| ||||||||||||| |||||    
T  20258912 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaataaaaagtaaataaaataaaagaaagagtatcagag 20258825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 20381763 - 20381696
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaac 120  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  20381763 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaatgtataaaaac 20381696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 21045542 - 21045455
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||||||||| |||||| ||  |||| ||||||||||||| |||||    
T  21045542 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaataaaaagtaaataaaataaaagaaagagtatcagag 21045455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 24647084 - 24647140
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||||||||||| |||||||||||||||||||||| ||||| |||||||| |||||    
T  24647084 aaatactatacatctactcccccttttgtcatcaacgaaaagtataaaaactaaaga 24647140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 3833726 - 3833808
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagta 133  Q
    |||||||||| |||| ||||||||||||||  || ||||||||||||||||||||||||   ||  ||||||||||||||||||    
T  3833726 tggggctcagagcct-aaaaatactatacaactattcccccttttgtcatcaacaaaaaagtaaataaaacaaaagaaagagta 3833808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 21289158 - 21289198
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  21289158 aaatactatacatctactcccccttttgtcatcaacaaaaa 21289198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 23784330 - 23784370
Alignment:
Q  71 aatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  23784330 aatactatacacttactcccccttttgtcatcaacaaaaag 23784370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 15335406 - 15335357
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    ||||||||||||| ||||||||||||||||| ||||| |||| |||||||    
T  15335406 aaatactatacatctactcccccttttgtcagcaacagaaagtataaaaa 15335357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 15424471 - 15424422
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    ||||||||||||| ||||||||||||||||| ||||| |||| |||||||    
T  15424471 aaatactatacatctactcccccttttgtcagcaacagaaagtataaaaa 15424422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 15515775 - 15515726
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    ||||||||||||| ||||||||||||||||| ||||| |||| |||||||    
T  15515775 aaatactatacatctactcccccttttgtcagcaacagaaagtataaaaa 15515726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 22663941 - 22663989
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||| ||||||| ||||||||||||| |||||||||||||| ||||||    
T  22663941 aaataatatacatctactcccccttttatcatcaacaaaaagtataaaa 22663989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 23184603 - 23184563
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  23184603 aaatattatacatctactcccccttttgtcatcaacaaaaa 23184563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 23352428 - 23352360
Alignment:
Q  49 tagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| |||| || ||||||||||  | || ||||||||||||||||||||||||| ||||||    
T  23352428 tagtggggctcagagcctaaataaatactata--tctattcccccttttgtcatcaacaaaaagtataaaa 23352360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 22156586 - 22156461
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22156586 atcagaagtatttaaaagaaatttagaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 22156487  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  22156486 tagaaacaaaagaaagagtatcagag 22156461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 15994132 - 15994243
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15994132 gaagtggttatagtggggctcagtgccttaaaaatactatacatttactcccgcttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 15994231  T
Q  139 gtttataaacat 150  Q
    |  |||||||||    
T  15994232 gcatataaacat 15994243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 27604198 - 27604321
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  27604198 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 27604296  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  27604297 aaaaacaaaagaaagagtatcagag 27604321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 31843440 - 31843303
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacattt-actcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31843440 atcagaagtatttaaaagaaatttagaagaggttatagtggggctcagtgccttaaaaatactatacattttactcccccttttgtcatcaacaaaaaga 31843341  T
Q  113 ataaaaacaaaagaaagagtagcagagtttataaacat 150  Q
    |||||||||||| ||||||||||||||  |||||||||    
T  31843340 ataaaaacaaaaaaaagagtagcagagcatataaacat 31843303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 31447993 - 31447873
Alignment:
Q  16 atcagaagtattt-aaaaggttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  31447993 atcagaagtattttaaaaagttttgaagtggttatagtggggctcagtgccttagaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 31447895  T
Q  115 aaaaacaaaagaaagagtagca 136  Q
    |||| |||||||||||||||||    
T  31447894 aaaagcaaaagaaagagtagca 31447873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 5291359 - 5291482
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  5291359 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagagt 5291457  T
Q  115 aaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| |||||    
T  5291458 aaaaacaaaagaaagagtatcagag 5291482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 39361795 - 39361678
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39361795 atcagaagtatttaaaaaagtttagaagtggttataatggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 39361697  T
Q  115 aaaaacaaaagaaagagta 133  Q
    |||||||||||||||||||    
T  39361696 aaaaacaaaagaaagagta 39361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 40400500 - 40400376
Alignment:
Q  16 atcagaagtatttaaaag-gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat 114  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40400500 atcagaagtatttaaaaaagtttagaagtggttatagtggggctcagtgccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaat 40400402  T
Q  115 a-aaaacaaaagaaagagtagcagag 139  Q
    | |||||||||||||||||| |||||    
T  40400401 aaaaaacaaaagaaagagtatcagag 40400376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 6985779 - 6985653
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6985779 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 6985680  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  6985679 atagaaacaaaagaaagagtatcagag 6985653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 14040078 - 14039952
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14040078 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 14039979  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  14039978 atagaaacaaaagaaagagtatcagag 14039952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 22685484 - 22685358
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22685484 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 22685385  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  22685384 atagaaacaaaagaaagagtatcagag 22685358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 23371993 - 23371867
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaa-tactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23371993 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 23371894  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  23371893 atagaaacaaaagaaagagtatcagag 23371867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 27470042 - 27469916
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27470042 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 27469943  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  27469942 atagaaacaaaagaaagagtatcagag 27469916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 36583319 - 36583445
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36583319 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 36583418  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  36583419 atagaaacaaaagaaagagtatcagag 36583445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 39491710 - 39491836
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39491710 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 39491809  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  39491810 atagaaacaaaagaaagagtatcagag 39491836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 35225527 - 35225427
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcaga 138  Q
    ||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  35225527 gaagttgttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcaga 35225428  T
Q  139 g 139  Q
    |    
T  35225427 g 35225427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 14558838 - 14558964
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  14558838 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgcctaaataaatactatacatttactcccccttttgtcatcaacaaaaaga 14558937  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  14558938 atagaaacaaaagaaagagtatcagag 14558964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 17729016 - 17728890
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||| |||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17729016 atcagaggtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 17728917  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  17728916 atagaaacaaaagaaagagtatcagag 17728890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 27043008 - 27043134
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27043008 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 27043107  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
     || ||||||||||||||||| |||||    
T  27043108 gtagaaacaaaagaaagagtatcagag 27043134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 31358633 - 31358507
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||| |||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31358633 atcagaggtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 31358534  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  31358533 atagaaacaaaagaaagagtatcagag 31358507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 14447813 - 14447938
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||||||||||||| |   ||| ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14447813 atcagaagtatttaaaggaaatttagaattggttatagtagggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaagaagaa 14447912  T
Q  114 taaaaacaaaagaaagagtagcagag 139  Q
    || ||||||||||||||||| |||||    
T  14447913 tagaaacaaaagaaagagtatcagag 14447938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 9346025 - 9345898
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaaaaa--tactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||||||||   ||| ||||||||| |||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  9346025 atcagaagtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaaaaaaatactatacatttactctcccttttgtcatcaacaaaaag 9345926  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| ||||||||||||||||| |||||    
T  9345925 aatagaaacaaaagaaagagtatcagag 9345898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 23706813 - 23706712
Alignment:
Q  39 gaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcag 137  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  23706813 gaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcag 23706714  T
Q  138 ag 139  Q
    ||    
T  23706713 ag 23706712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 36697711 - 36697584
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaaca-aaaag 111  Q
    |||||| |||||||||||   ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  36697711 atcagaggtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaag 36697612  T
Q  112 aataaaaacaaaagaaagagtagcagag 139  Q
    |||| |||||||||||||||||||||||    
T  36697611 aatagaaacaaaagaaagagtagcagag 36697584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 17617159 - 17617033
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||| |||||||||||   ||| ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17617159 atcagaggtatttaaaagaaatttagaagtggttatagtagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 17617060  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
     || ||||||||||||||||| |||||    
T  17617059 gtagaaacaaaagaaagagtatcagag 17617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 23306327 - 23306201
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||| |||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23306327 atcagaagtatttaaaagaaatttagaagaggttatagtaggactcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 23306228  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  23306227 atagaaacaaaagaaagagtatcagag 23306201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 24817664 - 24817790
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| |||| |||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24817664 atcagaagtatttaaaagaaatttagaagaggttatagtaggactcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 24817763  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  24817764 atagaaacaaaagaaagagtatcagag 24817790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 24588914 - 24589000
Alignment:
Q  54 gggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  24588914 gggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 24589000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 42052812 - 42052726
Alignment:
Q  54 gggctcagtgccttaaaaa-tactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  42052812 gggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaagaatagaaacaaaagaaagagtatcagag 42052726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 30228305 - 30228392
Alignment:
Q  54 gggctcagtgccttaaaa-atactatacatttactcccccttttgtcatcaac-aaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||    
T  30228305 gggctcagtgccttaaaaaatactatacatttactcccccttttgtcatcaacaaaaaagaatagaaacaaaagaaagagtatcagag 30228392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 23405846 - 23405763
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagta 133  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  23405846 tggggctcagagccttaaaaatactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagta 23405763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 19477355 - 19477266
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  19477355 tggggctcagagccttaaaaatactatacaacttctcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 19477266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 20561714 - 20561626
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  20561714 tggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 20561626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 1110019 - 1110099
Alignment:
Q  53 ggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagt 132  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  1110019 ggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagt 1110099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 34061992 - 34061912
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  34061992 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 34061912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 13523973 - 13524031
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  13523973 tggggctcagagcct-aaaaatactatacaattactcccccttttgtcatcaacaaaaag 13524031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 17447565 - 17447647
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||   ||  |||||||||||||||||    
T  17447565 tggggctcagagcctaaaaaatactatacaactactcccccttttgtcatcaacaaaaaagtaaataaaacaaaagaaagagt 17447647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 20797095 - 20797009
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||  ||| ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  20797095 tggggctcagagccttaaaa-tacta--catctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 20797009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 21415096 - 21415174
Alignment:
Q  54 gggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  21415096 gggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 21415174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 21519471 - 21519393
Alignment:
Q  54 gggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  21519471 gggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaacaaaacaaaagaaagagt 21519393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 24927013 - 24927105
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag------aataaaaacaaaagaaagagtagcagag 139  Q
    ||||||| || ||||||||| |||||||||| ||||||||||||||||||||||||||||      || ||||||||||||||||||| |||||    
T  24927013 tggggcttagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaagaaaaacaaaagaaagagtatcagag 24927105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 88802 - 88746
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||||||| |||||    
T  88802 aaatactatacatctactcccccttttgtcatccacaaaaagtataaaaactaaaga 88746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 23479148 - 23479219
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaa 124  Q
    |||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||| | ||||| ||||    
T  23479148 tggggctcagagcct-aaaattactatacaattactcccccttttgtcatcaacaaaaagtacaaaaaaaaaa 23479219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 21660967 - 21661029
Alignment:
Q  52 tggggctcagtgcct-taaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||| | || ||||||||||||| ||||| ||||||||||||||||||||||||    
T  21660967 tggggctcagtgcttatataaatactatacatctactctcccttttgtcatcaacaaaaagaa 21661029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 30743802 - 30743850
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  30743802 aaatagtatacatctactcccccttttgtcatcaacaaaaagtataaaa 30743850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 3887 - 3782
Alignment:
Q  34 gttttgaagtggttgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagta 133  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  3887 gttttaaagtggttatagtggggctcagtgccttaaaaatactatacatttactcctccttttgtcatcaacaaaaagaataagaacaaaagaaagagta 3788  T
Q  134 gcagag 139  Q
    ||||||    
T  3787 gcagag 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 3738 - 3698
Alignment:
Q  174 attaaaaacaataaatatcatcagagttaaaactgtagaac 214  Q
    ||||||||||||||||||||||||| |||||| | ||||||    
T  3738 attaaaaacaataaatatcatcagaattaaaagtatagaac 3698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 31987 - 32113
Alignment:
Q  16 atcagaagtatttaaaagg--ttttgaagtggttgtagtggggctcagtgccttaa-aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||||||||   ||| ||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31987 atcagaagtatttaaaagaaatttagaagtggttatagcagggctcagtgccttaacaaatactatacatttactcccccttttgtcatcaacaaaaaga 32086  T
Q  113 ataaaaacaaaagaaagagtagcagag 139  Q
    ||| ||||||||||||||||| |||||    
T  32087 atagaaacaaaagaaagagtatcagag 32113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 6 - 76
Alignment:
Q  69 aaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6 aaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 76  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 23526 - 23603
Alignment:
Q  54 gggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagt 132  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23526 gggctcagtgcattaaaaatactatacatttactcccccttttgtcatcaacaaaaagaat-aaaacaaaagaaagagt 23603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 52852 - 52768
Alignment:
Q  53 ggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagca 136  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  52852 ggggctcagagccttaaaa-tactatacatttactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagcagca 52768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1002 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1002
Description:

Target: scaffold1002; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 3235 - 3154
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagt 132  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||    
T  3235 tggggctcagagccttaaaa-tactatacatctactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagt 3154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 2189 - 2255
Alignment:
Q  74 actatacatttac-tcccccttttgtcatcaacaaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  2189 actatacatttacctcccccttttgtcatcaacaaaaagaataagaacaaaagacagagtagcagag 2255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 192891 - 192979
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||||||||||||||||||  | |||||||||||||||||||| |||||    
T  192891 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 192979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 8092 - 8153
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  8092 tggggctcagagccttaacaatactatacatctactcccccttttgtcatcaacaaaaagaa 8153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 2438 - 2355
Alignment:
Q  49 tagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    ||||||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  2438 tagtggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 2355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 6469 - 6386
Alignment:
Q  49 tagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    ||||||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  6469 tagtggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 6386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 7514 - 7601
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||    
T  7514 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagtatcagag 7601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 128605 - 128692
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||| |||||    
T  128605 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagtatcagag 128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 20966 - 21046
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| |||||||||||| |  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  20966 tggggctcagagcct-aaaaatactatagaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 21046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0398
Description:

Target: scaffold0398; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 3698 - 3610
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||||||| ||||| ||||||| ||||||||||||||  | |||||||||||||||||||| |||||    
T  3698 tggggctcagagccttaaaa-tactatacatctactctcccttttatcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 3610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0398; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 11953 - 11865
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag--aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| ||||||||| |||||||||| ||||| ||||||| ||||||||||||||  | |||||||||||||||||||| |||||    
T  11953 tggggctcagagccttaaaa-tactatacatctactctcccttttatcatcaacaaaaagtaagtaaaaacaaaagaaagagtatcagag 11865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 17767 - 17832
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  17767 tggggctcagagcct-aaaaatactatacatttactcccacttttgtcatcaacaaaaagtataaaa 17832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 10094 - 10159
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10094 tggggctcagagc-ttaaaaatactatacacttactcccccttttgtcatcaacaaaaagtataaaa 10159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 59254 - 59319
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  59254 tggggctcagagcct-aaaaatactatacacttactcccccttttgtcatcaacaaaaagtataaaa 59319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 30723 - 30803
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  30723 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 30803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 70561 - 70641
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  70561 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 70641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 837 - 778
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||||||| |||| | ||||||||||||| ||||||| |||||||||||| ||||||||    
T  837 tggggctcagagcct-ataaatactatacatctactcccacttttgtcatcaccaaaaaga 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 211502 - 211582
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  211502 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 211582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 217371 - 217451
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  217371 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 217451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 3009 - 3096
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||||| ||  ||||||||||||||| || |||||    
T  3009 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagaatatcagag 3096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 91 - 154
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataa 116  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  91 tggggctcagagcct-aaaaatactatacacttactcccccttttgtcatcaacaaaaagtataa 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 15831 - 15918
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaac-aaaaagaataaaaacaaaagaaagagtagcagag 139  Q
    |||||||||| |||| ||||||||||||||  |||||||||||||||||||||| ||||| ||  |||||||||||||||||| |||||    
T  15831 tggggctcagagcct-aaaaatactatacaactactcccccttttgtcatcaacaaaaaataaataaaacaaaagaaagagtatcagag 15918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 2801 - 2859
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  2801 tggggctcagagcct-aaaaatactatacaattactcccccttttgtcatcaacaaaaag 2859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 1667 - 1725
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  1667 tggggctcagagcct-aaaaatactatacacttactcccccttttgtcatcaacaaaaag 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 10609 - 10547
Alignment:
Q  47 tgtagtggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||    
T  10609 tgtaatggggctcagagcct-aaaaatactatacacttactcccccttttgtcatcaacaaaaa 10547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 4959 - 4892
Alignment:
Q  52 tggggctcagtgcct-taaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  4959 tggggctcagagcctataaaaatactatacatctactcctccttttgtcatcaacaaaaagtataaaa 4892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1260 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1260
Description:

Target: scaffold1260; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 2148 - 2083
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  2148 tggggctcagagcctttaaa-tactatacatctactcccccttttgtcatcaacaaaaagtataaaa 2083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0537 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 4018 - 3953
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  4018 tggggctcagagcct-aaaaatactatacacttactccccattttgtcatcaacaaaaagtataaaa 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 6465 - 6400
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  6465 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaagtataaaa 6400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 176296 - 176377
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagta 133  Q
    |||||||||| |||| |||| |||||||||  |||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  176296 tggggctcagggcctcaaaa-tactatacaactactcccccttttgtcatcaacaaaaagtaactaaaacaaaagaaagagta 176377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 53147 - 53104
Alignment:
Q  68 aaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  53147 aaaaatactatacacttactcccccttttgtcatcaacaaaaag 53104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 134722 - 134657
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  134722 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaagtataaaa 134657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 3507 - 3427
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  ||||| |||||||||||||||||||||| ||  |||||||||||||||||    
T  3507 tggggctcagagcct-aaaaatactatacaactactctcccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 3427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 3257 - 3177
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| |||||||||||| |  |||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  3257 tggggctcagagcct-aaaaatactatataactactcccccttttgtcatcaacaaaaagtaaataaaacaaaagaaagagt 3177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 9580 - 9500
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag-aataaaaacaaaagaaagagt 132  Q
    |||||||||| |||| ||||||||||||||  ||||||||||||| ||||||| |||||| ||  |||||||||||||||||    
T  9580 tggggctcagagcct-aaaaatactatacaactactcccccttttatcatcaaaaaaaagtaaataaaacaaaagaaagagt 9500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 18692 - 18755
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataa 116  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  18692 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaagtataa 18755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 16181 - 16121
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttact-cccccttttgtcatcaacaaaaag 111  Q
    ||||||| || |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  16181 tggggcttagagccttaaaaatactatacatctactccccccttttgtcatcaacaaaaag 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 34140 - 34077
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataa 116  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  34140 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaagtataa 34077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 21441 - 21488
Alignment:
Q  71 aatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  21441 aatactatacatctactcccccttttgtcatcaacaaaaagtataaaa 21488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 23451 - 23393
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||    
T  23451 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaag 23393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 62015 - 62061
Alignment:
Q  68 aaaaatactatacatttactcccccttttgtcatcaacaaaaagaata 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  62015 aaaaatactata-atttactcccccttttgtcatcaacaaaaagaata 62061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1948 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1948
Description:

Target: scaffold1948; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 222 - 272
Alignment:
Q  68 aaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  222 aaaaattctatacatctactcccccttttgtcatcaacaaaaagtataaaa 272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 14390 - 14463
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | ||||||||||||| ||||||||||||||||||||  |||||| |||||||| |||||    
T  14390 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcattaaaaagtataaaaactaaaga 14463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 60218 - 60145
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||| ||||||||| | |||||| |||||    
T  60218 tggggctcagagcct-ataaatactatacatctactcccccttttgtcataaacaaaaagtagaaaaactaaaga 60145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 30205 - 30148
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||    
T  30205 tggggctcagagcct-ataaatactatacatctactcccccttttgtcatcaacaaaaa 30148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 4636 - 4587
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaa 119  Q
    ||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  4636 aaatactatacatatactccccctattgtcatcaacaaaaagtataaaaa 4587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 25545 - 25602
Alignment:
Q  54 gggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||| |||| ||||||||||||||| |||||||| |||| ||||||||||||||    
T  25545 gggctcagagcctaaaaaatactatacatctactcccctttttttcatcaacaaaaag 25602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 7715 - 7763
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  7715 aaatattatacatctactcccccttttgtcatcaacaaaaagtataaaa 7763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 12577 - 12533
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||||||||  ||||||||||||||||||||||||||||    
T  12577 taaaaatactatacaactactcccccttttgtcatcaacaaaaag 12533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 24692 - 24633
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    |||||||||| |||| | ||||| ||||||| |||||||||||||||||||||||||||||    
T  24692 tggggctcagagcct-ataaataatatacatctactcccccttttgtcatcaacaaaaaga 24633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 24300 - 24237
Alignment:
Q  54 gggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||| |||| ||||||||||||||| | |||| ||||||||||||||||||||| ||||||    
T  24300 gggctcagagcct-aaaaatactatacatctcctcctccttttgtcatcaacaaaaagtataaaa 24237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 5817 - 5770
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  5817 aaatactatacatttactcccc-ttttgtcatcaacaaaaagtataaaa 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 58614 - 58574
Alignment:
Q  67 taaaaatactatacatttactcccccttttgtcatcaacaa 107  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  58614 taaaaatactatacacttactcccccttttgtcatcaacaa 58574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 143888 - 143935
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  143888 aaatactatacatctac-cccccttttgtcatcaacaaaaagtataaaa 143935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 3913 - 3866
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaa 117  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  3913 aaatactatacaactactcccccttttgtcatcaacaaaaaaaataaa 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0738 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 3972 - 3930
Alignment:
Q  68 aaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||||||| |||||||||||||||||||||| |||||    
T  3972 aaaaatactatacacttactcccccttttgtcatcaataaaaa 3930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 9216 - 9159
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    |||||||||| |||| ||||||||||||||  |||||||| ||||||||||||||||||    
T  9216 tggggctcagagcct-aaaaatactatacacgtactcccctttttgtcatcaacaaaaa 9159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 11319 - 11361
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaaga 112  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  11319 aaatactatacatctactcccccttttgtcaacaacaaaaaga 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 19748 - 19686
Alignment:
Q  52 tggggctcagtgcct-taaaaatactatacatttactcccccttttgtcatcaacaaaaagaa 113  Q
    ||||||||||||| | || ||||||||||||| ||||  ||||||||||||||||||||||||    
T  19748 tggggctcagtgcttatataaatactatacatctactttcccttttgtcatcaacaaaaagaa 19686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 9965 - 10030
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    |||||||||| |||| | ||||| ||||||| |||| ||||||||||||||||||||||| ||||||    
T  9965 tggggctcagagcct-ataaatattatacatctacttccccttttgtcatcaacaaaaagtataaaa 10030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 4112 - 4071
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaag 111  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  4112 aaatactatacatctactcccccttttgtcattaacaaaaag 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 12852 - 12796
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaaacaaaaga 126  Q
    ||||| ||||||| ||||| |||||||||||||||||||| | |||||||| |||||    
T  12852 aaatattatacatctactctcccttttgtcatcaacaaaatgtataaaaactaaaga 12796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 8175 - 8230
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatttactcccccttttgtcatcaacaaa 108  Q
    |||||||||| |||| | ||||||||||||  |||||||||||||||||||||||||    
T  8175 tggggctcagagcct-ataaatactatacaactactcccccttttgtcatcaacaaa 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 17083 - 17035
Alignment:
Q  70 aaatactatacatttactcccccttttgtcatcaacaaaaagaataaaa 118  Q
    ||||||||| ||| |||||||||||||||||||||||||| | ||||||    
T  17083 aaatactatgcatctactcccccttttgtcatcaacaaaatggataaaa 17035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 12183 - 12242
Alignment:
Q  52 tggggctcagtgccttaaaaatactatacatt-tactcccccttttgtcatcaacaaaaag 111  Q
    |||||||||| |||| | |||||||||||||  ||||||||||||||||||||||||||||    
T  12183 tggggctcagagcct-ataaatactatacatactactcccccttttgtcatcaacaaaaag 12242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 12544 - 12583
Alignment:
Q  71 aatactatacatttactcccccttttgtcatcaacaaaaa 110  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  12544 aatactatacaattactcccccttttgtcatcaaccaaaa 12583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 10521 - 10565
Alignment:
Q  76 tatacatttactcccccttttgtcatcaacaaaaagaataaaaac 120  Q
    ||||||| ||||| ||||||||||||||| |||||| ||||||||    
T  10521 tatacatctactcgcccttttgtcatcaataaaaaggataaaaac 10565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University