View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_43 (Length: 412)

Name: NF9913A_low_43
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_43
NF9913A_low_43
[»] chr4 (10 HSPs)
chr4 (8-400)||(20556610-20557001)
chr4 (8-356)||(14884240-14884581)
chr4 (8-400)||(8660190-8660566)
chr4 (17-74)||(9187546-9187602)
chr4 (203-306)||(12511654-12511757)
chr4 (321-400)||(18040268-18040347)
chr4 (321-400)||(22707958-22708037)
chr4 (53-91)||(12510323-12510361)
chr4 (279-388)||(3360222-3360331)
chr4 (17-74)||(3385858-3385914)
[»] scaffold0132 (1 HSPs)
scaffold0132 (8-400)||(31563-31954)
[»] scaffold0202 (1 HSPs)
scaffold0202 (8-400)||(24772-25164)
[»] chr5 (5 HSPs)
chr5 (8-400)||(25528888-25529273)
chr5 (8-387)||(21691274-21691652)
chr5 (8-74)||(36450940-36451005)
chr5 (17-74)||(20096980-20097036)
chr5 (321-400)||(12391622-12391701)
[»] chr2 (3 HSPs)
chr2 (8-400)||(24701655-24702046)
chr2 (8-287)||(24692815-24693093)
chr2 (17-74)||(20278401-20278457)
[»] scaffold0068 (1 HSPs)
scaffold0068 (8-387)||(22258-22636)
[»] chr6 (8 HSPs)
chr6 (8-399)||(20456427-20456817)
chr6 (8-400)||(18911807-18912196)
chr6 (8-74)||(19716350-19716415)
chr6 (17-74)||(27071579-27071635)
chr6 (19-74)||(22776515-22776569)
chr6 (321-400)||(16821198-16821277)
chr6 (321-400)||(27513954-27514033)
chr6 (37-74)||(18946746-18946783)
[»] chr1 (4 HSPs)
chr1 (67-400)||(14817284-14817618)
chr1 (8-399)||(19371494-19371883)
chr1 (8-74)||(35072273-35072338)
chr1 (8-37)||(14817626-14817655)
[»] scaffold0243 (1 HSPs)
scaffold0243 (8-387)||(17212-17590)
[»] chr8 (8 HSPs)
chr8 (116-400)||(32002547-32002831)
chr8 (85-400)||(20736454-20736769)
chr8 (85-400)||(20745012-20745327)
chr8 (141-383)||(20741380-20741622)
chr8 (17-74)||(22160450-22160506)
chr8 (279-390)||(24706478-24706589)
chr8 (8-37)||(25856623-25856652)
chr8 (49-89)||(32002492-32002532)
[»] chr3 (13 HSPs)
chr3 (8-387)||(15623147-15623525)
chr3 (8-363)||(14420994-14421348)
chr3 (8-400)||(12476531-12476912)
chr3 (8-377)||(14884826-14885195)
chr3 (8-74)||(13109112-13109177)
chr3 (10-74)||(23285454-23285517)
chr3 (17-74)||(8608886-8608942)
chr3 (17-74)||(12557733-12557789)
chr3 (17-74)||(30093172-30093228)
chr3 (17-74)||(70845-70901)
chr3 (321-400)||(8808324-8808403)
chr3 (321-400)||(21611754-21611833)
chr3 (8-74)||(33568552-33568617)
[»] scaffold0357 (1 HSPs)
scaffold0357 (17-400)||(9031-9410)
[»] scaffold0600 (1 HSPs)
scaffold0600 (8-400)||(8683-9058)
[»] scaffold0084 (1 HSPs)
scaffold0084 (49-334)||(33364-33649)
[»] scaffold0001 (1 HSPs)
scaffold0001 (203-400)||(99330-99527)
[»] scaffold0155 (1 HSPs)
scaffold0155 (8-389)||(19988-20354)
[»] scaffold0114 (1 HSPs)
scaffold0114 (8-399)||(31065-31420)
[»] scaffold0327 (1 HSPs)
scaffold0327 (48-234)||(17771-17956)
[»] scaffold0031 (1 HSPs)
scaffold0031 (53-194)||(28915-29055)
[»] chr7 (3 HSPs)
chr7 (8-74)||(13268067-13268132)
chr7 (17-74)||(34136426-34136482)
chr7 (321-400)||(23882984-23883063)
[»] scaffold0320 (1 HSPs)
scaffold0320 (17-74)||(3667-3723)
[»] scaffold0005 (1 HSPs)
scaffold0005 (279-387)||(301934-302042)
[»] scaffold0157 (2 HSPs)
scaffold0157 (203-306)||(9150-9253)
scaffold0157 (53-91)||(10116-10154)
[»] scaffold0004 (1 HSPs)
scaffold0004 (321-400)||(191690-191769)
[»] scaffold0362 (1 HSPs)
scaffold0362 (279-387)||(1066-1174)
[»] scaffold0551 (1 HSPs)
scaffold0551 (321-400)||(9551-9630)
[»] scaffold0306 (1 HSPs)
scaffold0306 (17-74)||(18336-18392)
[»] scaffold0014 (1 HSPs)
scaffold0014 (279-387)||(183653-183761)
[»] scaffold0009 (1 HSPs)
scaffold0009 (27-107)||(152406-152484)


Alignment Details
Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 8 - 400
Target Start/End: Original strand, 20556610 - 20557001
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| ||| || ||||||||||| |||||||| ||||    
T  20556610 caaaaagatagaacatatcagtttgaacaa-gagatccacgagcattcgtgaagaggtaacaacactccagaccaagttagagagactgagtactttggt 20556708  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20556709 ggcttcactggtagcttcgcaaaaatcagctgcagttccagcaagggctcgaacgccaacatcaactgcagcctcaacaacaggctccaaggatgcagtt 20556808  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||| || |||||||||||  ||||||||||||||||||    
T  20556809 tgacccaatcccaatgacatatgcggagctgcttcccatcttgctcgagaagaaccttgtcaagaccaaaacgcctcctcctgtgcctaacgagttgcca 20556908  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  20556909 gtatggtatcaagctgacctctcctgtgccttccatcaaggagctcccggccatcacgtcgagcactgtttctctttgaagattgaagtccag 20557001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 8 - 356
Target Start/End: Original strand, 14884240 - 14884581
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||| ||||||||||||||||||| || |||| ||||||||| |||||||||||||||||| ||| |||||||||||||| ||||||| |||||    
T  14884240 caaaaagaaaaaacatatcagtttgaacaa-gatatccacgagcattcatgaagaggtaacaacactccagaccgagttagagagactgagtaccctggt 14884338  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||    
T  14884339 agcttcactggtagcttcgcaaaaatcagctgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaa------gctccaaggatgcagtt 14884432  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| || |||||||||||  ||||||||||||||||||    
T  14884433 tgacccaatcccaatgacatatgcggagctgcttcccattttgctcgagaagaaccttgtcaagaccagaacgcctcctccggtgcctaacgagttgcca 14884532  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccg 356  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  14884533 gtatggtatcaagctgacctctcctgtgccttccatcaaggagcacccg 14884581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 400
Target Start/End: Original strand, 8660190 - 8660566
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||       |||| |||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  8660190 caaaaagaaagaacatatcagtttgaa-------atccacgagcattcgtgaagaggtaacaacactccaggccgagttaaagagactgagtaccctggt 8660282  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagc---aagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgca 204  Q
    |||| ||| ||||||||||| ||||||||| ||| ||||||    |||||||| ||||||||||||||            ||||||||||||||||||||    
T  8660283 ggctccacaggtagcttcgcgaaaatcagctgcatttccagtgcaaagggcccaaacgccaacatcaa------------caacaggctccaaggatgca 8660370  T
Q  205 gtttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttg 304  Q
    |||||||| |||||||||||| |||||| |||| |||||||| |||||| |||||||||||||||||| || |||||||||||  ||||||||||||||     
T  8660371 gtttgacccaatcccaatgacatatgcgaagctccttcccatcttgctcgagaagaaccttgtcaagaccagaacgcctcctccggtgcctaacgagttt 8660470  T
Q  305 ccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  8660471 ccagtatggtatcaagccgacctctcccgtgccttccatcaaggagctcccagccatgacatcgagcactgtttctctttgaagattgaagtccag 8660566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 9187546 - 9187602
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  9187546 agaacatatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 9187602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 12511654 - 12511757
Alignment:
Q  203 cagtttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagt 302  Q
    |||||||||| ||| || ||||  ||||| ||||| |||||||  ||||| ||||||||||||||| |||  | | |||||||||| ||||||||| |||    
T  12511654 cagtttgacctaattcccatgaaatatgctgagctgcttcccaccttgcttaagaagaaccttgtccagactagagcgcctcctcgggtgcctaacaagt 12511753  T
Q  303 tgcc 306  Q
    ||||    
T  12511754 tgcc 12511757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 18040268 - 18040347
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  18040268 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 18040347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 22707958 - 22708037
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  22707958 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 22708037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 12510361 - 12510323
Alignment:
Q  53 ttcgtgaagaggtaacaacacttcaggccgagttagaga 91  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  12510361 ttcgtgaagaggtaacaacacttcgggccgaggtagaga 12510323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 3360222 - 3360331
Alignment:
Q  279 cgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgttt 378  Q
    |||||||||| |||||| || | |||||||   |||||| | |||| ||||| ||| ||||||||||||| || ||| |||||||| | ||||| ||||     
T  3360222 cgcctcctcgggtgcctgacaaattgccagctgggtatcgatctgatctctcatgtgccttccatcaaggggcacccagccatgacattgagcattgtta 3360321  T
Q  379 ctctttgaag 388  Q
    | ||||||||    
T  3360322 cgctttgaag 3360331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 3385914 - 3385858
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| |||||||||||| || || |||| |||||||| |||||||||||||||||||    
T  3385914 agaacgtatcagtttgaataa-gaaatccacgagcattagtgaagaggtaacaacact 3385858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 285; Significance: 1e-159; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 8 - 400
Target Start/End: Original strand, 31563 - 31954
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||| ||||||||||||||||||||| || |||| || ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  31563 caaaaagatagaacatatcagtttgaacaa-gagatccacgtgcattcgtgaagaggtaacaacactgcagaccgagttagagagactgagtactctggt 31661  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  31662 ggcttcactggtagcttcgcaaaaatcagctgtagttccagcaagggccggaactccaacatcaacagcagcctcaacaacaggctccaaggatggagtt 31761  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||  | || ||||||||  ||||||||||||||||||    
T  31762 tgacccaatcccaatgacatatgcggagctacttcccatcttgctcgagaagaaccttgtcaagactagaaagcctcctccggtgcctaacgagttgcca 31861  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  31862 gtatggtatcaagctgacctctcctgtgccttccatcaaggagctcccggccatgacatcgagcactgtttctctttgaagattgaagtccag 31954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 8 - 400
Target Start/End: Complemental strand, 25164 - 24772
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  25164 caaaaagaaagaacatatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacactccaggccgagttagagagactgagtactatggt 25066  T
Q  108 ggctt-cactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagt 206  Q
    ||||| || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  25065 ggctttcattggtagcttcgcaaaaatcagctgcatttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggatccaaggatgcaat 24966  T
Q  207 ttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcc 306  Q
    |||||| |||||||||||| |||| | ||||||||||||| |||||| |||||||||||||||||| || |||||||||||  |||||||||||||||||    
T  24965 ttgacccaatcccaatgacatatgtgaagctacttcccatattgctcgagaagaaccttgtcaagaccagaacgcctcctccggtgcctaacgagttgcc 24866  T
Q  307 agtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  24865 agtatggtatcaagctgacctctcatgtgccttccatcaaggagcacccggccatgacatcgaacactgtttctctttgaagattgaagtccag 24772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 8 - 400
Target Start/End: Original strand, 25528888 - 25529273
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||       |||| ||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  25528888 caaaaagaaagaacatatcagtttgaa-------atccacgagcattcctgaagaggtaacaacactctaggccgagttagagagactgagtactctggt 25528980  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     |||||||||||||||| ||| |||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25528981 agcttcactggtagctttgcagaaatcaactgcagttccagcaagggctcgaacgccaacatcaacagcagcctcaacaactggctccaaggatgcagtt 25529080  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| ||| || ||||| ||||||||||| |||||||| |||||  |||||||||||||||||| || |||||||||||  |||||||||||||||||     
T  25529081 tgacccaattccgatgacatatgcggagctgcttcccatcttgctagagaagaaccttgtcaagaccagaacgcctcctcaggtgcctaacgagttgccc 25529180  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||| || ||| ||||||    
T  25529181 gtatggtatcaagctgatctctcctgtaccttccatcatggagctcccgaccatgacatcgagcactgtttctctttgacgactgaagtccag 25529273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 387
Target Start/End: Original strand, 21691274 - 21691652
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||  ||||    
T  21691274 caaaaagaaagaacatatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacacttcaggccgagttagagagactaagtaccttggt 21691372  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     |||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||    
T  21691373 agcttcactggtagcttcgcacaaatcaactgcagttccagcaagggcccgaacgccaacatcaacagaagcctcaacaacaggctccaaagatgccgtt 21691472  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||  |||||||| |||||||||    
T  21691473 tgacccaatcccgatgacatatgcggagctacttcccattttgctcaagaagaaccttgtcaacaccagaacgcctcctcaggtgcctaaagagttgcca 21691572  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaa 387  Q
    |||||||| |||||||||||||||| | |||||||| ||| |||||| | ||||||   |||||||| ||||||| ||||    
T  21691573 gtatggtaccaagctgacctctcctatgccttccattaagaagctcctgaccatgaaaccgagcactatttctctctgaa 21691652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 36450940 - 36451005
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||||| | ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  36450940 caaaaaaagagaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 36451005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 20097036 - 20096980
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  20097036 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 20096980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 12391701 - 12391622
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  12391701 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 12391622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 8 - 400
Target Start/End: Original strand, 24701655 - 24702046
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||| ||||||||| ||||||||| || | || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||    
T  24701655 caaaaagaaataacatatcattttgaacaa-gaaacccacgagcattcgtgaagaggtaacaacacttcaggccgagttaaagagactgagtaccttggt 24701753  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     |||||||||| |||||||||||||||||  |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24701754 agcttcactggaagcttcgcaaaaatcagttgtcgttccagcaagggcccgaacaccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 24701853  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||| | |||||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||  | | |||||||||  |||||||| || ||||||    
T  24701854 tgatccaatcccaatgacatatgcggagctgcttcccatcttgctcgagaagaaccttgtcaagactagagcgcctcctccggtgcctaaggatttgcca 24701953  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||    
T  24701954 gtatggtaccaagctgacctctcctatgccttccatcaaggagctcccggcaatgacaccgagcactgtttctctttgaagattgaagtccag 24702046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 8 - 287
Target Start/End: Original strand, 24692815 - 24693093
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||| ||||| ||||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||  ||||    
T  24692815 caaacagaaataacatatcagtttgaacaa-gaaacccacgagcattcgtgaagaggtaacaacacttcaggccaagttaaagagactgagtaccttggt 24692913  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     |||||||||| |||||||||||||||||  |  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24692914 agcttcactggaagcttcgcaaaaatcagttgtcgttccaacaagggcccgaacaccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 24693013  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctc 287  Q
    ||||| |||||||||||| ||||||||||| |||||||| |||||| |||||||||||| ||||| || |||||||||||    
T  24693014 tgacccaatcccaatgacatatgcggagctgcttcccatcttgctcgagaagaaccttgccaagaccagaacgcctcctc 24693093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 20278457 - 20278401
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  20278457 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 20278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 387
Target Start/End: Complemental strand, 22636 - 22258
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||  ||||    
T  22636 caaaaagaaagaacatatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacacttcaggccgagttagagagactaagtaccttggt 22538  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     |||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||    
T  22537 agcttcactggtagcttcgcacaaatcaactgcagttccagcaagggcccgaacgccaacatcaacagaagcctcaacaacaggctccaaagatgccgtt 22438  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||  |||||||| |||||||||    
T  22437 tgacccaatcccgatgacatatgcggagctacttcccattttgctcaagaagaaccttgtcaacaccagaacgcctcctcaggtgcctaaagagttgcca 22338  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaa 387  Q
    |||||||| |||||||||||||||| | |||||||| ||| |||||| | ||||||   |||||||| ||||||| ||||    
T  22337 gtatggtaccaagctgacctctcctatgccttccattaagaagctcctgaccatgaaaccgagcactatttctctctgaa 22258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 399
Target Start/End: Complemental strand, 20456817 - 20456427
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||| ||||||||||||||||| ||| || || | |||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||| |||||    
T  20456817 caaaaagagagaacatatcagtttgaccaa-gagatacacgagcattcgtgaagaggtagcaacactccaggccgagttaaagagactgagtaccctggt 20456719  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     ||||||||||||||||||||||||||||| || || |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20456718 agcttcactggtagcttcgcaaaaatcagctgcggtcccagcaagggcctgaacaccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 20456619  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||| | |||| ||||||| |||||||||||||||||||| |||||| ||||||| |||| ||||  ||  ||| ||||||  ||||||||||||||||||    
T  20456618 tgatccaatcgcaatgacatatgcggagctacttcccatattgctcgagaagaaacttgccaaggccaggacgtctcctccggtgcctaacgagttgcca 20456519  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtcca 399  Q
    ||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  20456518 gtatggtatcaagctgacctcgcatgtgccttccatcaaggagcacccggccatgacatcgagcactgtttctctttgaagattgaagtcca 20456427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 8 - 400
Target Start/End: Original strand, 18911807 - 18912196
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||| ||||||||||||||||||||| || |||| ||||||||||||||| |||||||||||| |||  ||||||||||||| ||||||| |||||    
T  18911807 caaaaagagagaacatatcagtttgaacaa-gagatccacgagcattcgtgaagtggtaacaacactccagttcgagttagagagactgagtaccctggt 18911905  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    ||||||||||||||||||||  || ||| ||||||||| | ||||| || |||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  18911906 ggcttcactggtagcttcgcggaa-tcaaccgcagttctaacaaggtcc-gaacgccaacatcaacagcagcctcggcaacaggctccaaggatgtagtt 18912003  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    |||   |||||||||||| ||||||||||| ||||||||  | ||| || ||||||| ||  ||| || |  ||||||||| ||||||||| |||||||     
T  18912004 tgaaacaatcccaatgacatatgcggagcttcttcccatccttctccaggagaacctcgtgtagaccagagtgcctcctcgggtgcctaacaagttgccg 18912103  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    || ||||||||| |||||||||| ||| |||||||||||||||| || ||||||||| |||||||| ||||||||||||||| ||| ||||||    
T  18912104 gtttggtatcaatctgacctctcatgttccttccatcaaggagcaccaggccatgacatcgagcaccgtttctctttgaagactgaagtccag 18912196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 19716350 - 19716415
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  19716350 caaaaagaaagaacatatcagtttgaac-aagaaatccacgagcattcgtgaagaggtaacaacact 19716415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 27071635 - 27071579
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  27071635 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 27071579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 22776569 - 22776515
Alignment:
Q  19 aacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||    
T  22776569 aacatattagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 22776515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 16821277 - 16821198
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  16821277 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaggtccag 16821198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 27513954 - 27514033
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  27513954 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 27514033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 18946783 - 18946746
Alignment:
Q  37 aagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  18946783 aagaaatccacgagcattcgtgaagaggtaacaacact 18946746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 67 - 400
Target Start/End: Complemental strand, 14817618 - 14817284
Alignment:
Q  67 acaacacttcaggccgagttagagagattgagtactctggtggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaa 166  Q
    ||||||||||||||||||||| ||||| |||| || ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  14817618 acaacacttcaggccgagttaaagagactgagcaccctggtggtttcactggtagcttcgcaaaaatcagctgtagttccagcaagggcccgaacgccaa 14817519  T
Q  167 catcaacagcagcctcaacaacaggctccaaggatgcagtttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttg 266  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||| |||||| ||||||||||||    
T  14817518 catcaacagcagcctcaacaacaggctccaaggatgcaatttgacccaatcccaatgacatatgcggagctgcttcccatattgctcgagaagaaccttg 14817419  T
Q  267 tcaagatcataacgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgt 366  Q
    ||||||||| ||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |    
T  14817418 tcaagatcagaacgcttcctctggtgcctaacgagttgccagtatggtatcaagctgacctctcctgtgccttccatcaaggagctcccgaccatgacat 14817319  T
Q  367 cgagcact-gtttctctttgaagattgatgtccag 400  Q
    | ||||||  |||||||||||||||||| ||||||    
T  14817318 caagcactattttctctttgaagattgaagtccag 14817284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 399
Target Start/End: Original strand, 19371494 - 19371883
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||| ||||||||||||||||||||||| || |||| ||||||||| |||||||||||||||||| ||| || ||||||||||| ||||||| || ||    
T  19371494 caaaaataaagaacatatcagtttgaacaa-gaaatccacgagcattcttgaagaggtaacaacactccagaccaagttagagagactgagtaccctagt 19371592  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    |||  |||||||||||||||| || ||||||||| ||||| || |||||| |||||||||||| |||  ||||||||||||| |||||||||||||||||    
T  19371593 ggccacactggtagcttcgcagaa-tcagccgcaattccaacaggggcccaaacgccaacatccacaatagcctcaacaacaagctccaaggatgcagtt 19371691  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||||||||| ||||||||||| |||||||| |||||| | |||||||||||||||| || |||||||||||  |||||||||||||||| |    
T  19371692 tgacccaatcccaatgacatatgcggagctgcttcccatcttgctcgataagaaccttgtcaagaccagaacgcctcctccggtgcctaacgagttgcta 19371791  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtcca 399  Q
    ||||||||||||||||||||| | ||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  19371792 gtatggtatcaagctgacctcgcatgtgccttccatcaaggagcacccggccatgacatcgagcactgtttctctttgaagattgaagtcca 19371883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 35072273 - 35072338
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||||    
T  35072273 caaaaagaaagaacatatcagtttgaac-aagaaatccacgagcattcgtgaagaggaaacaacact 35072338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 14817655 - 14817626
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaa 37  Q
    ||||||||||||||||||||||||||||||    
T  14817655 caaaaagaaagaacatatcagtttgaacaa 14817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 387
Target Start/End: Original strand, 17212 - 17590
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    ||||| |||||||||||||||||||||||| || |||| |||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||    
T  17212 caaaatgaaagaacatatcagtttgaacaa-gaaatccacgagcattcgtgaagaagtaacaacactccaggccgagttagagagactgagtaccctggt 17310  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    |||||||||||||||||  || |||||||| ||| ||||||| | || | ||||||||||||||| ||||| |||||||||| |||| ||||||||||||    
T  17311 ggcttcactggtagctttacagaaatcagctgcatttccagccaagggctgaacgccaacatcaatagcagtctcaacaacacgctctaaggatgcagtt 17410  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    |||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||| || |||||||||||  ||||||||||||||||||    
T  17411 tgaccaaatccctatgacatatgcggagctacttcccattttactcgagaagaaccttgtcaagaccagaacgcctcctcaggtgcctaacgagttgcca 17510  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaa 387  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||  |||||| ||||||||| ||||    
T  17511 gtatggtaccaagctgacctctcctgtgccttccatcaaggagctcctggccatgacaccgagcattgtttctctctgaa 17590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 116 - 400
Target Start/End: Original strand, 32002547 - 32002831
Alignment:
Q  116 tggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtttgaccaaa 215  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  32002547 tggtagcttcgcaaaaatcagctgcagttccagcaagggcccaaacgccaacatcaacagtagcctcaacaacaggctccaaggatgcagtttgacccaa 32002646  T
Q  216 tcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgccagtatggta 315  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  32002647 tcccaatgacatatgcggagctacttcccattttgattgagaagaaccttgtcaagaccaaaacacctcctcgagtgcctaacgagttgccagtatggta 32002746  T
Q  316 tcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  32002747 tcaagctgacctctcctgtgccttccatcaaggagctcccggccacgacgtcgagcactgtttctctttgaagattgaagtccag 32002831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 85 - 400
Target Start/End: Original strand, 20736454 - 20736769
Alignment:
Q  85 ttagagagattgagtactctggtggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaa 184  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20736454 ttagagagactgagtactttggtagcttcactggtagcttcgcaaatatcagctgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaa 20736553  T
Q  185 caacaggctccaaggatgcagtttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctc 284  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||  || |||||||| |||||| || | ||||||    
T  20736554 caacaggctccaaggatgcagtttgacccgatcccaatgacatatgcggagctacttcccatcttgcttcaggagaaccttatcaagaccagagcgcctc 20736653  T
Q  285 ctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctcttt 384  Q
    |||| |||||||||  ||||||||  ||||||||| || ||||||||| | |||||||||||||||| || ||||||||| || ||||||||||||||||    
T  20736654 ctcgggtgcctaacacgttgccagcttggtatcaatctaacctctcctatgccttccatcaaggagcaccgggccatgacatcaagcactgtttctcttt 20736753  T
Q  385 gaagattgatgtccag 400  Q
    ||||| ||| ||||||    
T  20736754 gaagactgaagtccag 20736769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 85 - 400
Target Start/End: Original strand, 20745012 - 20745327
Alignment:
Q  85 ttagagagattgagtactctggtggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaa 184  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20745012 ttagagagactgagtactttggtagcttcactggtagcttcgcaaatatcagctgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaa 20745111  T
Q  185 caacaggctccaaggatgcagtttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctc 284  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||  || |||||||| |||||| || | ||||||    
T  20745112 caacaggctccaaggatgcagtttgacccgatcccaatgacatatgcggagctacttcccatcttgcttcaggagaaccttatcaagaccagagcgcctc 20745211  T
Q  285 ctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctcttt 384  Q
    |||| |||||||||  ||||||||  ||||||||| || ||||||||| | |||||||||||||||| || ||||||||| || ||||||||||||||||    
T  20745212 ctcgggtgcctaacacgttgccagcttggtatcaatctaacctctcctatgccttccatcaaggagcaccgggccatgacatcaagcactgtttctcttt 20745311  T
Q  385 gaagattgatgtccag 400  Q
    ||||| ||| ||||||    
T  20745312 gaagactgaagtccag 20745327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 141 - 383
Target Start/End: Original strand, 20741380 - 20741622
Alignment:
Q  141 agttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtttgaccaaatcccaatgacgtatgcggagctact 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  20741380 agttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtttgacccgatcccaatgacatatgcggagctact 20741479  T
Q  241 tcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttc 340  Q
    |||||| |||||  ||||||||||| |||||| || | |||||| ||| || ||| ||  ||||||||  |||||| || || ||||||||| | |||||    
T  20741480 tcccatcttgcttcagaagaaccttatcaagaccaaagcgcctcatcgggttcctgacacgttgccagcttggtattaatctaacctctcctatgccttc 20741579  T
Q  341 catcaaggagctcccggccatgacgtcgagcactgtttctctt 383  Q
    |||||| |||| || ||||||||| ||||||| ||||||||||    
T  20741580 catcaacgagcaccgggccatgacatcgagcattgtttctctt 20741622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 22160506 - 22160450
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  22160506 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 22160450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 24706589 - 24706478
Alignment:
Q  279 cgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgttt 378  Q
    |||||||||| | ||||||| || |||| || ||||||| |  | ||||||| ||| |||||||| |||| || ||    |||||||| |||||||||||    
T  24706589 cgcctcctcgggggcctaacaaggtgccggtttggtatcgatatcacctctcttgtgccttccatgaaggggcaccaactcatgacgttgagcactgttt 24706490  T
Q  379 ctctttgaagat 390  Q
    ||||||||||||    
T  24706489 ctctttgaagat 24706478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 37
Target Start/End: Complemental strand, 25856652 - 25856623
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaa 37  Q
    ||||||||||||||||||||||||||||||    
T  25856652 caaaaagaaagaacatatcagtttgaacaa 25856623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 32002492 - 32002532
Alignment:
Q  49 agcattcgtgaagaggtaacaacacttcaggccgagttaga 89  Q
    |||||||||||||||||||||| ||| | ||||||||||||    
T  32002492 agcattcgtgaagaggtaacaagactccgggccgagttaga 32002532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-125; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 8 - 387
Target Start/End: Original strand, 15623147 - 15623525
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||||| || || | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||  ||||    
T  15623147 caaaaagaaagaacatatcagtttgaacaa-gaaattcacgagcatttgtgaagaggtaacaacacttcaggccgagttagagagactgagtaccttggt 15623245  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     |||||||||||||||||| | |||||| | | ||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||    
T  15623246 agcttcactggtagcttcgaacaaatcaactgtagttccagcaagggcccgaacgccaacatcaacaaaagcctcaacaacaggcttcaaagatgcagtt 15623345  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||  |||||||| |||||||||    
T  15623346 tgacccaatcccgatgacatatgcggagctacttcccattttgctcgagaagaaccttgtcaacaccagaacgcctcctcaggtgcctaaagagttgcca 15623445  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaa 387  Q
    |||||||| |||||||||||||||||| |||||||| ||| |||||||| ||||||   |||||||||||||||| ||||    
T  15623446 gtatggtaccaagctgacctctcctgtgccttccattaagaagctcccgaccatgaaaccgagcactgtttctctctgaa 15623525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 8 - 363
Target Start/End: Original strand, 14420994 - 14421348
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||| |||| ||| |||||||||||| ||||| ||||||| |||||    
T  14420994 caaaaagaaagaacatatcagtttgaacaa-gaaatccacgagcattcgtaaagaggtgacaaaactccaggccgagttaaagagactgagtaccctggt 14421092  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
     ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||| || ||||||||||||| ||||| |||||||||    
T  14421093 agcttcactggtagcttcgcaaaaatcagctgcagttctagcaagggcccggacgccaacatcaacaacaacctcaacaacaggttccaaagatgcagtt 14421192  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||| || |||||||||||  || |||||||||||||||    
T  14421193 tgacccaatcccaatgacatatgcgaagctacttcccattttgctcgagaagaaccttgtcgagaccagaacgcctcctccggttcctaacgagttgcca 14421292  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatga 363  Q
    ||||||||||||||| ||||||||||| ||||||||||| | || || ||||||||    
T  14421293 gtatggtatcaagctaacctctcctgtgccttccatcaaagggcacctggccatga 14421348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 400
Target Start/End: Complemental strand, 12476912 - 12476531
Alignment:
Q  8 caaaaagaaagaacatatc--agtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctg 105  Q
    ||||||||||||||||||   ||||||||||| || |||| |||| |||||||||||||||||||||||  |||| | |||||||||| ||||||| |||    
T  12476912 caaaaagaaagaacatatattagtttgaacaa-gaaatccacgagaattcgtgaagaggtaacaacactctaggctgggttagagagactgagtaccctg 12476814  T
Q  106 gtggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcag 205  Q
    |||||  ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||            |||||||||||||||||||    
T  12476813 gtggccacactggtagcttcgcaaaaatcagctgcagttccggcaatggcccgaacgccaacatcaaca------------acaggctccaaggatgcag 12476726  T
Q  206 tttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgc 305  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||| || |||||||||||  ||||||||||||||||    
T  12476725 tttgaccaaatcccattgacatatgcggagctacttcccatcttgctcgagaagaaccttgtcaagaccagaacgcctcctccggtgcctaacgagttgc 12476626  T
Q  306 cagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||| | ||||| |||||||||||||||| ||| ||||||    
T  12476625 cagtatggtatcaagctgacctctcctgtgccttccatcgaggagcacccgaccatgacattgagcattgtttctctttgaagactgaagtccag 12476531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 8 - 377
Target Start/End: Complemental strand, 14885195 - 14884826
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    ||||| ||||||||||||||||||||| || || |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14885195 caaaaggaaagaacatatcagtttgaataa-gaaatccacgagcattcgtgtagaggtaacaacactccaggccgagttagagagattgagtactctggt 14885097  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    |||||||||||||||||||||||||||||| ||| |||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  14885096 ggcttcactggtagcttcgcaaaaatcagctgcaattccagtaagggcccgaatgcgaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 14884997  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttccc-attttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcc 306  Q
    ||||| |||||| ||||| ||||||||||||| |||| || |||||  |||||||||| ||| | |  | | |||||||||| |||||| || |||||||    
T  14884996 tgacccaatcccgatgacatatgcggagctacctcccaatattgcttgagaagaacctggtccaaactagagcgcctcctcgggtgcctgactagttgcc 14884897  T
Q  307 agtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtt 377  Q
    |   |||||   | |||| ||||||||| |||| |||||||| || |||| ||||||| | ||||| ||||    
T  14884896 aacttggtactgatctgatctctcctgtgcctttcatcaaggggcacccgaccatgacattgagcattgtt 14884826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 13109177 - 13109112
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||||| | ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  13109177 caaaaaaagagaacatatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 13109112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 23285517 - 23285454
Alignment:
Q  10 aaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||| ||||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  23285517 aaaaaaaagaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 23285454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 8608886 - 8608942
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  8608886 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 8608942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 12557733 - 12557789
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  12557733 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 12557789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 30093228 - 30093172
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||||||||||||||||||| || || | ||||||||||||||||||||||||||||    
T  30093228 agaacatatcagtttgaacaa-gaaattcacgagcattcgtgaagaggtaacaacact 30093172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 70845 - 70901
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||| ||||||||||| || |||| ||||||||||||||||||||||||||||    
T  70845 agaacgtattagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 70901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 8808324 - 8808403
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  8808324 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 8808403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 21611754 - 21611833
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  21611754 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 21611833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 33568552 - 33568617
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||||| | ||||| || |||||||||||| || |||| | ||||||||||||||||||||||||||    
T  33568552 caaaaaaagagaacgtaccagtttgaacaa-gaaatccacaagcattcgtgaagaggtaacaacact 33568617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 17 - 400
Target Start/End: Original strand, 9031 - 9410
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggtggcttcact 116  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||||||| |  |||||| ||||||||| | ||||||||||||||| ||||||    
T  9031 agaacatatcagtttgaacaa-gagatccacgagcattcgtgaagaggtaacaactc--caggccaagttagagatactgagtactctggtggtttcact 9127  T
Q  117 ggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtttgaccaaat 216  Q
    |||||||||| | || ||  ||  |||||||  | |||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  9128 ggtagcttcgtagaa-tcttccatagttccattaggggcacaaacgccaacatcaacaacagcctcaacaacaggctccaaggatgcagtttgacccaat 9226  T
Q  217 cccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgccagtatggtat 316  Q
    |||||| || ||||||||||| |||||||| |||||| ||| |||||||||||||| || |||||||||||  ||||||||||||||| | |||||||||    
T  9227 cccaattacatatgcggagctgcttcccatcttgctcgagaggaaccttgtcaagaccagaacgcctcctccggtgcctaacgagttgacggtatggtat 9326  T
Q  317 caagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  9327 caagctaacctctcatgtgccttccatcaaggagctcccggccatgacatcgagcattgtttctctttgaaaattgaagtccag 9410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 400
Target Start/End: Original strand, 8683 - 9058
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||| ||||||| ||||||||||||| || || | |||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||| || ||    
T  8683 caaaaagagagaacatgtcagtttgaacaa-gagatacacgagcattcgtgaagaggtagcaacactccaggccgagttaaagagactgagtaccctagt 8781  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    |||  |||||||| ||||||| || ||| |||| |||| |||||||||||||||||||||||||||               |||||||||||||||| ||    
T  8782 ggccacactggtaacttcgcagaa-tcaaccgcggttctagcaagggcccgaacgccaacatcaac---------------aggctccaaggatgcactt 8865  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    | |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||| |    
T  8866 taaccaaatcccaatgacatatgcggagctacttcccattttgctcgagaagaaacttgtcaagaccagaacgcctcctcgagtgcctaacgagttgcta 8965  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||| ||||||    
T  8966 gtatggtatcaagctgacctctcctctgccttccatcaaggagctcccgaccatgacgttgagcactatttctctttgaagattgaagtccag 9058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 49 - 334
Target Start/End: Complemental strand, 33649 - 33364
Alignment:
Q  49 agcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggtggcttcactggtagcttcgcaaaaatcagccgcagttccag 148  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||    
T  33649 agcattcctgaagaggtaacaacactccgggccaagttagagagactgagtactctagtggcttcaccggtagcttcgcaaaaatcagctgcaattccag 33550  T
Q  149 caagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtttgaccaaatcccaatgacgtatgcggagctacttcccattt 248  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| | |||||||| |    
T  33549 caagggctcgaacgccaacatcaacagcagcctcaacaacaggctccaacgatgcagtttgacccaatcccaatgacatatgcggagttccttcccatct 33450  T
Q  249 tgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgt 334  Q
    | ||| |||||||||| ||||||| || |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  33449 ttctcgagaagaacctcgtcaagaccagaacgcctcctccggtgcctaacgagttgccagtatggtatcaagctgacctctcctgt 33364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 146; Significance: 9e-77; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 203 - 400
Target Start/End: Original strand, 99330 - 99527
Alignment:
Q  203 cagtttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagt 302  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||| ||||    
T  99330 cagtttgacccaatcccaatgacatatgcggagctacttcccattttactcgagaagaaccttgtcaagaccagaacgcctcctcgagtgcctaatgagt 99429  T
Q  303 tgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||||    
T  99430 tgctagtatggtatcaagctgacctctcctgtgccttccatcaaggagctcccggccacgatgtcgagcactgtttctcattgaagattgaagtccag 99527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 8 - 389
Target Start/End: Complemental strand, 20354 - 19988
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    |||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||||||||| |||||| ||||||||| | |||| ||||||||    
T  20354 caaaaagaaagaacatatcagtttgaacaa-gagatccacgggcattcgtgaagaggtaacaacactccaggccaagttagagatactgagcactctggt 20256  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    || |||||||||||||||| | || ||  ||||| |||||||||||||  ||||||| |||||||||            ||||||||||| |||||||||    
T  20255 ggtttcactggtagcttcgtagaa-tcttccgcaattccagcaagggct-gaacgccgacatcaaca------------acaggctccaaagatgcagtt 20170  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||| |||||||||||| ||||| ||| ||||||||||  ||||| || |||||||| |||||| || | | |||||||| |||||| ||  ||||||     
T  20169 tgacccaatcccaatgacatatgcagagttacttcccatcctgctccaggagaaccttatcaagaccagagcacctcctcgggtgcctgacacgttgccg 20070  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaaga 389  Q
    |  ||||||||| || ||||||||||| |||||||||||||||| || ||||||||| ||||||| ||||||||||| ||||    
T  20069 gcttggtatcaatctaacctctcctgtgccttccatcaaggagcaccgggccatgacatcgagcattgtttctctttaaaga 19988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 136; Significance: 8e-71; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 8 - 399
Target Start/End: Complemental strand, 31420 - 31065
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    ||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||||||| | ||   | ||||||||||| |||||||||||||    
T  31420 caaaaaggaagaacatatcagtttgaacaa-gagatccgcgagcattcgtgatgaggtaacaacagtccaaatcaagttagagagactgagtactctggt 31322  T
Q  108 ggcttcactggtagcttcgcaaaaatcagccgcagttccagcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtt 207  Q
    ||||||| ||||||| |||||||||||||| |||         |||||||||||||||||||||||||               |||||||||||||| ||    
T  31321 ggcttcattggtagcctcgcaaaaatcagctgca---------agggcccgaacgccaacatcaacag---------------gctccaaggatgcaatt 31246  T
Q  208 tgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagttgcca 307  Q
    ||||  |||||| ||||| |||||||||||||||||||| ||| || ||||||||| || ||| | ||||||||||||||  ||||||||||||||||||    
T  31245 tgactcaatcccgatgacatatgcggagctacttcccatattgttcgagaagaaccatgccaataccataacgcctcctccggtgcctaacgagttgcca 31146  T
Q  308 gtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtcca 399  Q
    ||||||||||||||||||||||           ||||||||||| || ||||||||| ||||||| |||||||||||||||||||| |||||    
T  31145 gtatggtatcaagctgacctct-----------catcaaggagcacctggccatgacatcgagcaatgtttctctttgaagattgaagtcca 31065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 48 - 234
Target Start/End: Original strand, 17771 - 17956
Alignment:
Q  48 gagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggtggcttcactggtagcttcgcaaaaatcagccgcagttcca 147  Q
    |||||||||||||||  ||||||||||   |||||||||||||||| ||||||| || |||||| |||||||||||||||| || |||| ||||||||||    
T  17771 gagcattcgtgaagatttaacaacactctgggccgagttagagagactgagtaccctagtggctacactggtagcttcgcagaa-tcagtcgcagttcca 17869  T
Q  148 gcaagggcccgaacgccaacatcaacagcagcctcaacaacaggctccaaggatgcagtttgaccaaatcccaatgacgtatgcgga 234  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| || ||| || ||||  ||||||||    
T  17870 gcaagggcccaaacgccaacatcaacagtagcctcaacaacaggctccaaggatgcaatttgccccaattcccatgaaatatgcgga 17956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 194
Target Start/End: Complemental strand, 29055 - 28915
Alignment:
Q  53 ttcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggtggcttcactggtagcttcgcaaaaatcagccgcagttccagcaag 152  Q
    ||||||||||||| |||||||||| ||||||| ||||||   |||||||  |||| |  |  ||||| | ||| || || |||||| ||||||||||||     
T  29055 ttcgtgaagaggtgacaacacttcgggccgagatagagaagctgagtaccttggtagtcttgctggtggtttcacataa-tcagccacagttccagcaaa 28957  T
Q  153 ggcccgaacgccaacatcaacagcagcctcaacaacaggctc 194  Q
    ||| |||||||| ||||||| |||||||||||||||||||||    
T  28956 ggcacgaacgcccacatcaatagcagcctcaacaacaggctc 28915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 13268132 - 13268067
Alignment:
Q  8 caaaaagaaagaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    |||||| | ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  13268132 caaaaaaagagaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 13268067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 34136482 - 34136426
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  34136482 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 34136426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 23883063 - 23882984
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||| ||||||||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  23883063 ctgacctcttttgtgccttccatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 23882984  T

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Target: scaffold0320 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 3723 - 3667
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  3723 agaacgtatcagtttgaacaa-gaaatccacgagcattcgtgaagaggtaacaacact 3667  T

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Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 301934 - 302042
Alignment:
Q  279 cgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgttt 378  Q
    |||||||||| |||| | || ||||||| |  ||||||||| |||| ||||| ||| ||||||||||||| || |||||||||||| | ||||| ||||     
T  301934 cgcctcctcgggtgcgtgacaagttgccggcttggtatcaatctgatctctcatgtgccttccatcaaggggcacccggccatgacattgagcattgtta 302033  T
Q  379 ctctttgaa 387  Q
    | |||||||    
T  302034 cgctttgaa 302042  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 9253 - 9150
Alignment:
Q  203 cagtttgaccaaatcccaatgacgtatgcggagctacttcccattttgctcaagaagaaccttgtcaagatcataacgcctcctcgagtgcctaacgagt 302  Q
    |||||||||| ||| || ||||  ||||| ||||| |||||||  ||||| ||||||||||||||| |||  | | |||||||||| ||||||||| |||    
T  9253 cagtttgacctaattcccatgaaatatgctgagctgcttcccaccttgcttaagaagaaccttgtccagactagagcgcctcctcgggtgcctaacaagt 9154  T
Q  303 tgcc 306  Q
    ||||    
T  9153 tgcc 9150  T

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Target: scaffold0157; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 10116 - 10154
Alignment:
Q  53 ttcgtgaagaggtaacaacacttcaggccgagttagaga 91  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  10116 ttcgtgaagaggtaacaacacttcgggccgaggtagaga 10154  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 191769 - 191690
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  ||||||||||||| ||| || |  || |||||||| |||||||||||||| ||||||||||| ||||||    
T  191769 ctgacctcttttgtaccttccatcgaggggcacaaggtcatgacgttgagcactgtttctccttgaagattgaagtccag 191690  T

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Target: scaffold0362 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 1174 - 1066
Alignment:
Q  279 cgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgttt 378  Q
    |||||||||| |||||| || ||||||||   ||||| | | |||| ||||| ||| |||| |||||||| || |||||||||||| | ||||||||||     
T  1174 cgcctcctcgggtgcctgacaagttgccaacttggtaccgatctgatctctcatgtgcctttcatcaaggggcacccggccatgacattgagcactgtta 1075  T
Q  379 ctctttgaa 387  Q
    | |||||||    
T  1074 cgctttgaa 1066  T

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Target: scaffold0551 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0551
Description:

Target: scaffold0551; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 9630 - 9551
Alignment:
Q  321 ctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgtttctctttgaagattgatgtccag 400  Q
    |||||||||  |||||||| |||||||| || |  || |||||||| ||||| |||||||| ||||||||||| ||||||    
T  9630 ctgacctctattgtacctttcatcaaggggcacaaggtcatgacgttgagcattgtttctccttgaagattgaagtccag 9551  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 18336 - 18392
Alignment:
Q  17 agaacatatcagtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacact 74  Q
    ||||| ||||||||||||||| || ||||  ||||| |||||||||||||||||||||    
T  18336 agaacgtatcagtttgaacaa-gaaatccatgagcactcgtgaagaggtaacaacact 18392  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 183761 - 183653
Alignment:
Q  279 cgcctcctcgagtgcctaacgagttgccagtatggtatcaagctgacctctcctgtaccttccatcaaggagctcccggccatgacgtcgagcactgttt 378  Q
    |||||||||| |||||| || | |||||||   |||||| | |||| ||||| ||| |||| |||||||| || |||||||||||| | ||||| ||||     
T  183761 cgcctcctcgggtgcctgacaaattgccagctgggtatcgatctgatctctcatgtgcctttcatcaaggggcacccggccatgacattgagcattgtta 183662  T
Q  379 ctctttgaa 387  Q
    | |||||||    
T  183661 cgctttgaa 183653  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 152406 - 152484
Alignment:
Q  27 agtttgaacaaagacatccgcgagcattcgtgaagaggtaacaacacttcaggccgagttagagagattgagtactctggt 107  Q
    ||||||||||| || |||| ||||| ||||||||||||| |||||||| | || |||||||||||  |||||||| |||||    
T  152406 agtttgaacaa-gagatccacgagc-ttcgtgaagaggtgacaacactcccgggcgagttagagaatttgagtacactggt 152484  T

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