View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_84 (Length: 347)

Name: NF9913A_low_84
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_84
NF9913A_low_84
[»] chr8 (29 HSPs)
chr8 (1-83)||(21974142-21974224)
chr8 (1-83)||(21978252-21978334)
chr8 (1-83)||(43250240-43250322)
chr8 (1-81)||(14399053-14399133)
chr8 (1-81)||(21409939-21410019)
chr8 (1-81)||(21804431-21804511)
chr8 (1-84)||(23913303-23913384)
chr8 (1-84)||(44385793-44385874)
chr8 (1-85)||(21386197-21386279)
chr8 (1-84)||(23427864-23427945)
chr8 (1-83)||(21829430-21829501)
chr8 (1-83)||(22110639-22110710)
chr8 (1-81)||(18864076-18864145)
chr8 (1-81)||(30941536-30941605)
chr8 (297-341)||(18863811-18863856)
chr8 (297-341)||(30941271-30941316)
chr8 (296-339)||(21973689-21973733)
chr8 (296-339)||(21977780-21977824)
chr8 (296-339)||(22110965-22111009)
chr8 (296-339)||(43250725-43250769)
chr8 (297-339)||(21829139-21829182)
chr8 (1-41)||(21328604-21328644)
chr8 (1-51)||(27942675-27942726)
chr8 (1-42)||(21967992-21968033)
chr8 (1-42)||(21980832-21980873)
chr8 (1-42)||(21985815-21985856)
chr8 (1-42)||(22000778-22000819)
chr8 (1-42)||(22009196-22009237)
chr8 (1-42)||(34950124-34950165)
[»] chr7 (52 HSPs)
chr7 (1-83)||(31763-31845)
chr7 (1-83)||(12706081-12706163)
chr7 (1-83)||(12713578-12713660)
chr7 (1-83)||(12722236-12722318)
chr7 (1-83)||(16908468-16908550)
chr7 (5-83)||(12717329-12717407)
chr7 (1-83)||(18278032-18278114)
chr7 (1-83)||(18281996-18282078)
chr7 (1-81)||(2833442-2833522)
chr7 (1-81)||(15083264-15083344)
chr7 (1-81)||(39721234-39721314)
chr7 (1-81)||(2531293-2531373)
chr7 (1-81)||(7520176-7520256)
chr7 (1-84)||(20486780-20486861)
chr7 (1-84)||(25928330-25928412)
chr7 (1-84)||(10607280-10607361)
chr7 (1-85)||(18301389-18301471)
chr7 (1-84)||(16582459-16582540)
chr7 (1-60)||(26291195-26291254)
chr7 (5-85)||(9752466-9752544)
chr7 (1-85)||(1859979-1860062)
chr7 (1-85)||(13919370-13919453)
chr7 (1-54)||(39268301-39268354)
chr7 (41-83)||(72341-72383)
chr7 (41-83)||(76450-76492)
chr7 (1-51)||(11660320-11660370)
chr7 (1-51)||(13891668-13891718)
chr7 (1-47)||(13892051-13892097)
chr7 (1-81)||(45171472-45171541)
chr7 (297-341)||(45171207-45171252)
chr7 (296-339)||(32023-32067)
chr7 (296-339)||(12713838-12713882)
chr7 (296-339)||(12717662-12717706)
chr7 (296-339)||(12722573-12722617)
chr7 (296-339)||(18278357-18278401)
chr7 (296-339)||(18282320-18282364)
chr7 (1-49)||(18424273-18424321)
chr7 (297-339)||(71970-72013)
chr7 (297-339)||(76079-76122)
chr7 (1-51)||(14420825-14420875)
chr7 (1-51)||(16005042-16005092)
chr7 (1-51)||(18606376-18606426)
chr7 (1-51)||(18871335-18871385)
chr7 (1-37)||(72376-72412)
chr7 (1-37)||(76485-76521)
chr7 (1-51)||(838123-838174)
chr7 (1-51)||(1203303-1203354)
chr7 (1-51)||(16109965-16110016)
chr7 (1-51)||(146538-146588)
chr7 (1-51)||(10897887-10897937)
chr7 (1-42)||(16185562-16185603)
chr7 (1-41)||(15213086-15213126)
[»] chr6 (43 HSPs)
chr6 (1-83)||(8242450-8242532)
chr6 (1-83)||(11565439-11565521)
chr6 (1-83)||(12620292-12620374)
chr6 (1-83)||(23988341-23988423)
chr6 (5-83)||(22861797-22861875)
chr6 (1-84)||(11716898-11716981)
chr6 (1-81)||(27555577-27555657)
chr6 (1-81)||(22075347-22075431)
chr6 (1-84)||(2076324-2076405)
chr6 (1-85)||(18918539-18918621)
chr6 (1-60)||(23400716-23400775)
chr6 (1-85)||(14470919-14471001)
chr6 (1-83)||(22947705-22947776)
chr6 (1-83)||(22951661-22951732)
chr6 (1-83)||(23870149-23870220)
chr6 (1-83)||(23874105-23874176)
chr6 (1-60)||(18953465-18953524)
chr6 (32-85)||(1643321-1643372)
chr6 (41-83)||(16758782-16758824)
chr6 (1-81)||(19869225-19869294)
chr6 (1-81)||(23393679-23393748)
chr6 (1-81)||(23413587-23413656)
chr6 (297-341)||(19869514-19869559)
chr6 (297-341)||(23393968-23394013)
chr6 (297-341)||(23413876-23413921)
chr6 (296-339)||(8242788-8242832)
chr6 (296-339)||(11565776-11565820)
chr6 (296-339)||(12619990-12620034)
chr6 (296-339)||(23988874-23988918)
chr6 (297-339)||(16759152-16759195)
chr6 (296-338)||(22948031-22948074)
chr6 (296-338)||(22951987-22952030)
chr6 (296-338)||(23870475-23870518)
chr6 (296-338)||(23874431-23874474)
chr6 (1-51)||(23538019-23538069)
chr6 (1-51)||(27222870-27222920)
chr6 (1-49)||(16622873-16622921)
chr6 (1-49)||(31479455-31479503)
chr6 (1-51)||(12941259-12941309)
chr6 (297-341)||(14471255-14471300)
chr6 (1-41)||(25737930-25737970)
chr6 (1-29)||(27416540-27416568)
chr6 (5-41)||(34297773-34297809)
[»] chr5 (36 HSPs)
chr5 (1-83)||(19474131-19474213)
chr5 (1-83)||(20294552-20294634)
chr5 (1-81)||(18354835-18354915)
chr5 (1-74)||(24768530-24768603)
chr5 (1-85)||(20912211-20912293)
chr5 (1-85)||(15238076-15238158)
chr5 (1-84)||(22108409-22108490)
chr5 (1-85)||(40727358-40727440)
chr5 (1-84)||(22120551-22120632)
chr5 (1-81)||(11219593-11219662)
chr5 (1-81)||(11224179-11224248)
chr5 (1-81)||(11226195-11226264)
chr5 (1-81)||(11228001-11228070)
chr5 (1-81)||(11229991-11230060)
chr5 (296-341)||(19473830-19473876)
chr5 (297-341)||(11219882-11219927)
chr5 (297-341)||(11224468-11224513)
chr5 (297-341)||(11226448-11226493)
chr5 (297-341)||(11230280-11230325)
chr5 (297-341)||(18355189-18355234)
chr5 (1-49)||(10751855-10751903)
chr5 (296-339)||(20294815-20294859)
chr5 (297-339)||(40727069-40727112)
chr5 (1-51)||(19510500-19510550)
chr5 (1-51)||(22339050-22339100)
chr5 (1-51)||(23113393-23113443)
chr5 (1-51)||(28372072-28372122)
chr5 (1-51)||(37599999-37600049)
chr5 (1-51)||(38146409-38146459)
chr5 (1-51)||(41878642-41878692)
chr5 (297-335)||(11228290-11228329)
chr5 (1-51)||(22335520-22335570)
chr5 (1-51)||(22749199-22749249)
chr5 (1-37)||(9774978-9775014)
chr5 (1-41)||(36459586-36459626)
chr5 (12-48)||(39362991-39363027)
[»] chr4 (37 HSPs)
chr4 (1-83)||(9555107-9555189)
chr4 (1-83)||(14758950-14759032)
chr4 (1-83)||(14955718-14955800)
chr4 (1-83)||(17807092-17807174)
chr4 (1-83)||(25688480-25688562)
chr4 (1-83)||(4562732-4562814)
chr4 (1-83)||(5758414-5758496)
chr4 (1-83)||(33740874-33740956)
chr4 (1-81)||(20158408-20158488)
chr4 (1-81)||(20163859-20163939)
chr4 (3-81)||(20161084-20161162)
chr4 (1-83)||(12486309-12486388)
chr4 (1-85)||(23996925-23997007)
chr4 (1-81)||(10711863-10711943)
chr4 (1-81)||(10925633-10925713)
chr4 (1-84)||(12422981-12423062)
chr4 (1-84)||(17052405-17052486)
chr4 (1-85)||(631706-631788)
chr4 (1-85)||(22634885-22634967)
chr4 (1-85)||(27532790-27532872)
chr4 (1-54)||(13813820-13813873)
chr4 (1-54)||(13818308-13818361)
chr4 (1-51)||(24048375-24048425)
chr4 (297-341)||(12486570-12486615)
chr4 (296-339)||(4562433-4562477)
chr4 (296-339)||(9555444-9555488)
chr4 (296-339)||(14758574-14758618)
chr4 (296-339)||(14955339-14955383)
chr4 (1-49)||(15223584-15223632)
chr4 (296-339)||(33741214-33741258)
chr4 (297-339)||(5757958-5758001)
chr4 (296-338)||(25688817-25688860)
chr4 (1-51)||(15533257-15533307)
chr4 (1-51)||(18211642-18211692)
chr4 (1-51)||(49549073-49549123)
chr4 (1-51)||(30145821-30145872)
chr4 (1-51)||(36036990-36037040)
[»] chr3 (69 HSPs)
chr3 (1-83)||(7108276-7108358)
chr3 (1-83)||(7112211-7112293)
chr3 (1-83)||(11068651-11068733)
chr3 (1-83)||(22320167-22320249)
chr3 (1-83)||(22335222-22335304)
chr3 (1-83)||(55021414-55021496)
chr3 (1-83)||(11167052-11167134)
chr3 (1-83)||(14497985-14498067)
chr3 (1-83)||(28948499-28948581)
chr3 (1-81)||(5219885-5219965)
chr3 (1-81)||(11853744-11853824)
chr3 (1-81)||(37440641-37440721)
chr3 (4-83)||(15616218-15616297)
chr3 (1-81)||(11301626-11301706)
chr3 (1-81)||(14664463-14664543)
chr3 (1-81)||(14667627-14667707)
chr3 (1-84)||(16795541-16795622)
chr3 (1-82)||(12853325-12853404)
chr3 (1-60)||(18933337-18933396)
chr3 (1-60)||(30064423-30064482)
chr3 (1-85)||(4590119-4590201)
chr3 (1-84)||(14670064-14670142)
chr3 (1-85)||(15463916-15463999)
chr3 (1-85)||(14068021-14068103)
chr3 (1-85)||(17318468-17318550)
chr3 (1-57)||(12337294-12337348)
chr3 (41-83)||(4112607-4112649)
chr3 (41-82)||(4108759-4108800)
chr3 (1-48)||(10834935-10834982)
chr3 (1-84)||(14681588-14681664)
chr3 (296-341)||(11069065-11069111)
chr3 (1-51)||(13435856-13435906)
chr3 (2-51)||(8928858-8928907)
chr3 (297-341)||(15963824-15963869)
chr3 (297-341)||(15967748-15967793)
chr3 (297-341)||(15971672-15971717)
chr3 (296-339)||(7108613-7108657)
chr3 (296-339)||(7112548-7112592)
chr3 (296-339)||(11166676-11166720)
chr3 (296-339)||(14498322-14498366)
chr3 (296-339)||(15616552-15616596)
chr3 (41-81)||(15963564-15963604)
chr3 (41-81)||(15967488-15967528)
chr3 (41-81)||(15971412-15971452)
chr3 (296-339)||(22320581-22320625)
chr3 (296-339)||(22335636-22335680)
chr3 (296-339)||(28948759-28948803)
chr3 (296-339)||(30064764-30064808)
chr3 (296-339)||(55021902-55021946)
chr3 (297-339)||(4108387-4108430)
chr3 (297-339)||(4112239-4112282)
chr3 (1-48)||(16751895-16751942)
chr3 (1-51)||(3802008-3802058)
chr3 (296-341)||(14067672-14067718)
chr3 (1-51)||(14764786-14764836)
chr3 (1-51)||(20249840-20249890)
chr3 (1-51)||(29545929-29545979)
chr3 (1-51)||(54519635-54519685)
chr3 (1-50)||(18899491-18899540)
chr3 (1-41)||(11912465-11912505)
chr3 (1-51)||(9532296-9532346)
chr3 (1-51)||(12304212-12304262)
chr3 (1-51)||(23372534-23372584)
chr3 (1-51)||(51299571-51299621)
chr3 (1-37)||(4108793-4108830)
chr3 (1-37)||(4112642-4112679)
chr3 (1-42)||(8491732-8491773)
chr3 (38-85)||(8490350-8490395)
chr3 (1-49)||(19774236-19774284)
[»] chr2 (27 HSPs)
chr2 (1-83)||(24630006-24630088)
chr2 (1-83)||(24645189-24645271)
chr2 (1-83)||(24647965-24648047)
chr2 (1-83)||(27600409-27600491)
chr2 (1-83)||(30346616-30346698)
chr2 (1-83)||(10103255-10103337)
chr2 (1-83)||(12902565-12902647)
chr2 (1-83)||(27380952-27381034)
chr2 (1-83)||(27384922-27385004)
chr2 (1-81)||(31343955-31344035)
chr2 (1-84)||(9784032-9784113)
chr2 (1-81)||(41532414-41532483)
chr2 (297-341)||(41532149-41532194)
chr2 (296-339)||(10102956-10103000)
chr2 (296-339)||(24629627-24629671)
chr2 (296-339)||(27380500-27380544)
chr2 (296-339)||(27384546-27384590)
chr2 (296-339)||(27600746-27600790)
chr2 (296-339)||(30346163-30346207)
chr2 (1-51)||(6481822-6481872)
chr2 (1-51)||(6485289-6485339)
chr2 (1-51)||(19663548-19663598)
chr2 (1-51)||(20260295-20260345)
chr2 (1-51)||(21074498-21074548)
chr2 (1-35)||(24647132-24647166)
chr2 (297-341)||(1282351-1282396)
chr2 (1-48)||(9240712-9240759)
[»] chr1 (21 HSPs)
chr1 (1-83)||(1009300-1009382)
chr1 (1-83)||(1926754-1926836)
chr1 (1-83)||(16376774-16376856)
chr1 (1-83)||(20925768-20925850)
chr1 (1-83)||(52634306-52634388)
chr1 (1-81)||(33796071-33796151)
chr1 (1-84)||(22132058-22132139)
chr1 (1-85)||(21406291-21406373)
chr1 (1-84)||(41801238-41801319)
chr1 (1-60)||(20230120-20230179)
chr1 (296-339)||(1009637-1009681)
chr1 (296-339)||(1926301-1926345)
chr1 (296-339)||(16376552-16376596)
chr1 (296-339)||(20925315-20925359)
chr1 (1-49)||(39245163-39245211)
chr1 (1-49)||(39248718-39248766)
chr1 (1-49)||(41389657-41389705)
chr1 (296-339)||(52634723-52634767)
chr1 (1-51)||(16370963-16371013)
chr1 (301-341)||(33796462-33796503)
chr1 (1-42)||(11809949-11809990)
[»] scaffold0061 (2 HSPs)
scaffold0061 (2-83)||(68514-68595)
scaffold0061 (297-339)||(68328-68371)
[»] scaffold0372 (2 HSPs)
scaffold0372 (1-83)||(6279-6361)
scaffold0372 (296-339)||(6167-6211)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-83)||(60283-60366)
[»] scaffold0349 (2 HSPs)
scaffold0349 (1-83)||(11089-11170)
scaffold0349 (296-339)||(11431-11475)
[»] scaffold1852 (1 HSPs)
scaffold1852 (1-81)||(781-861)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-81)||(14882-14962)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1-74)||(11027-11100)
[»] scaffold0486 (1 HSPs)
scaffold0486 (1-81)||(8615-8695)
[»] scaffold0157 (2 HSPs)
scaffold0157 (1-83)||(34089-34168)
scaffold0157 (297-341)||(33862-33907)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-81)||(11815-11895)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-84)||(21298-21380)
[»] scaffold0575 (1 HSPs)
scaffold0575 (1-84)||(6920-7001)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-85)||(25526-25608)
[»] scaffold0380 (2 HSPs)
scaffold0380 (1-85)||(4012-4094)
scaffold0380 (42-85)||(1-42)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-84)||(8699-8780)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-84)||(74291-74372)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-84)||(18861-18942)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-60)||(37179-37238)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-60)||(62821-62880)
scaffold0029 (296-341)||(79489-79535)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-57)||(5863-5917)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-84)||(37161-37243)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-51)||(28510-28560)
scaffold0080 (1-51)||(33975-34025)
[»] scaffold0525 (2 HSPs)
scaffold0525 (1-85)||(5489-5571)
scaffold0525 (297-339)||(5006-5049)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-81)||(15546-15615)
scaffold0141 (297-341)||(15281-15326)
[»] scaffold0200 (1 HSPs)
scaffold0200 (41-81)||(10834-10874)
[»] scaffold1427 (1 HSPs)
scaffold1427 (1-51)||(238-288)
[»] scaffold0842 (1 HSPs)
scaffold0842 (1-51)||(5280-5330)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-51)||(10812-10862)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-51)||(109639-109689)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-51)||(224133-224183)
[»] scaffold1873 (1 HSPs)
scaffold1873 (22-85)||(691-753)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-41)||(4159-4199)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-51)||(3507-3557)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-42)||(23937-23978)
[»] scaffold0001 (1 HSPs)
scaffold0001 (14-51)||(153803-153840)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-29)||(70793-70821)


Alignment Details
Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21974224 - 21974142
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974224 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21974142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21978334 - 21978252
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21978334 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21978252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43250240 - 43250322
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43250240 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataatcatc 43250322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 14399133 - 14399053
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14399133 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21409939 - 21410019
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21409939 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21410019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21804431 - 21804511
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21804431 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23913303 - 23913384
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  23913303 tcatcaagtacatttaacaacttatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 23913384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44385874 - 44385793
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  44385874 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaacaactt--aaacaacacaatataatcatca 44385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21386197 - 21386279
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  21386197 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21386279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23427864 - 23427945
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  23427864 tcattaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--agacaacacaatataatcatca 23427945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21829501 - 21829430
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  21829501 tcatcaagtacacttaacaactcatagatatcatcat-----------cactaataactttaaaacaacacaatataatcatc 21829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22110639 - 22110710
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||||||||    
T  22110639 tcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacataatataatcatc 22110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18864145 - 18864076
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||    
T  18864145 tcatcaagtacacttaacaactcatagatatcatcat-----------cactaataactttaaaacaacacaatgtaatca 18864076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30941605 - 30941536
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||    
T  30941605 tcatcaagtacacttaacaactcatagatatcatcat-----------cactaataactttaaaacaacacaatgtaatca 30941536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 18863856 - 18863811
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18863856 tattcatcatcttatcaaaatataatcaacacatactaacaccata 18863811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 30941316 - 30941271
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  30941316 tattcatcatcttatcaaaatataatcaacacatactaacaccata 30941271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 21973733 - 21973689
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  21973733 gtattcatcatcttatgaaaatataatcaacacatactaacacca 21973689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 21977824 - 21977780
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  21977824 gtattcatcatcttatgaaaatataatcaacacatactaacacca 21977780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 22110965 - 22111009
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  22110965 gtattcatcatcttatgaaaatataatcaacacatactaacacca 22111009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 43250725 - 43250769
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  43250725 gtattcatcatcttatgaaaatataatcaacacatactaacacca 43250769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 21829182 - 21829139
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacacca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  21829182 tattcatcatcttataaaaatataatcaacacatactaacacca 21829139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21328604 - 21328644
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaa 41  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  21328604 tcatcaagtacatttaacaactcatagataacatcatgtaa 21328644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27942726 - 27942675
Alignment:
Q  1 tcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  27942726 tcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 27942675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21968033 - 21967992
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  21968033 tcatcaagtacatttaacaactcataggtaacatcatgtaat 21967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21980873 - 21980832
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  21980873 tcatcaagtacatttaacaactcataggtaacatcatgtaat 21980832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21985856 - 21985815
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  21985856 tcatcaagtacatttaacaactcataggtaacatcatgtaat 21985815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22000819 - 22000778
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  22000819 tcatcaagtacatttaacaactcataggtaacatcatgtaat 22000778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22009237 - 22009196
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  22009237 tcatcaagtacatttaacaactcataggtaacatcatgtaat 22009196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34950124 - 34950165
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  34950124 tcatcaagtacatttaacaactcataggtaacatcatgtaat 34950165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31763 - 31845
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31763 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 31845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12706163 - 12706081
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12706163 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12706081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12713578 - 12713660
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713578 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12722236 - 12722318
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722236 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12722318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16908550 - 16908468
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16908550 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16908468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 12717329 - 12717407
Alignment:
Q  5 caagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717329 caagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12717407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18278032 - 18278114
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18278032 tcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatataatcatc 18278114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18281996 - 18282078
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18281996 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaaaaactttaaaacaacacaatataatcatc 18282078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2833522 - 2833442
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2833522 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 2833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15083264 - 15083344
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15083264 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 15083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39721234 - 39721314
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  39721234 tcatcaagtacatttaacaactcatagatatcatcatgtaatcatcattactaataactttaaaacaacacaatgtaatca 39721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2531373 - 2531293
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  2531373 tcatcaagtacacctaacaactcatagatatcttcatataatcatcatcactaataactttaaaacaacacaatgtaatca 2531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 7520256 - 7520176
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  7520256 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactgataactttaaaacaacacaatgtaatca 7520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20486780 - 20486861
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20486780 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 20486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25928412 - 25928330
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25928412 tcataaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 25928330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10607361 - 10607280
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  10607361 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 10607280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 18301389 - 18301471
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  18301389 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 18301471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16582459 - 16582540
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  16582459 tcatcaagtacatttaacaactcataaataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 16582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26291195 - 26291254
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26291195 tcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 26291254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 9752544 - 9752466
Alignment:
Q  5 caagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||  |||||||||||||| ||||||||    
T  9752544 caagtacatttaacaactcatagataacatcatgtaattatcatcactaataactt--aaacaacacaatatgatcatcac 9752466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1860062 - 1859979
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  1860062 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 1859979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13919453 - 13919370
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  13919453 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 13919370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39268354 - 39268301
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 54  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  39268354 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 39268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 72383 - 72341
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  72383 atcatcatcactaataactttaaaacaacacaatataatcatc 72341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 76492 - 76450
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  76492 atcatcatcactaataactttaaaacaacacaatataatcatc 76450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11660320 - 11660370
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  11660320 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 11660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13891668 - 13891718
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  13891668 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 13891718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13892051 - 13892097
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatca 47  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  13892051 tcatcaagtacatttaacaactcatagataacatcatgtaatcatca 13892097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 45171541 - 45171472
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||    
T  45171541 tcatcaagtacacttaacaactcatagatatcatcat-----------cactaataactttaaaacaacacaatgtaatca 45171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 45171252 - 45171207
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  45171252 tattcatcatcttatcaaaatataatcaacacatactaacaccata 45171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 32023 - 32067
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  32023 gtattcatcatcttatgaaaatataatcaacacatactaacacca 32067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 12713838 - 12713882
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12713838 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12713882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 12717662 - 12717706
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12717662 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12717706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 12722573 - 12722617
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12722573 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12722617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 18278357 - 18278401
Alignment:
Q  296 gtattcatcatcttata-aaatataatcaacacatactaacacca 339  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  18278357 gtattcatcatcttatataaatataatcaacacatactaacacca 18278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 18282320 - 18282364
Alignment:
Q  296 gtattcatcatcttata-aaatataatcaacacatactaacacca 339  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  18282320 gtattcatcatcttatataaatataatcaacacatactaacacca 18282364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18424273 - 18424321
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  18424273 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 18424321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 72013 - 71970
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacacca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  72013 tattcatcatcttataaaaatataatcaacacatactaacacca 71970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 76122 - 76079
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacacca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  76122 tattcatcatcttataaaaatataatcaacacatactaacacca 76079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14420825 - 14420875
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  14420825 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 14420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16005042 - 16005092
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  16005042 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 16005092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18606376 - 18606426
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  18606376 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18871335 - 18871385
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  18871335 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18871385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 72412 - 72376
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcat 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  72412 tcatcaagtacacttaacaattcatagatatcatcat 72376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 76521 - 76485
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcat 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  76521 tcatcaagtacacttaacaattcatagatatcatcat 76485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 838174 - 838123
Alignment:
Q  1 tcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  838174 tcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 838123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1203354 - 1203303
Alignment:
Q  1 tcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  1203354 tcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 1203303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16110016 - 16109965
Alignment:
Q  1 tcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  16110016 tcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 16109965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 146538 - 146588
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  146538 tcatcaagtacatttaacaactcatagataacatcgcataatcatcatcac 146588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10897937 - 10897887
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||| ||||||||||| |||||  |||||||||||||    
T  10897937 tcatcaagtacatttaacgactcatagataacatcacataatcatcatcac 10897887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16185562 - 16185603
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  16185562 tcatcaagtacatttaacaactcataggtaacatcatgtaat 16185603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15213086 - 15213126
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaa 41  Q
    |||||||||||| |||||||||||| |||| ||||||||||    
T  15213086 tcatcaagtacatttaacaactcatggataacatcatgtaa 15213126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8242450 - 8242532
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8242450 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 8242532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 11565439 - 11565521
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565439 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11565521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12620374 - 12620292
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620374 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12620292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23988341 - 23988423
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988341 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 23988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 22861797 - 22861875
Alignment:
Q  5 caagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22861797 caagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 11716981 - 11716898
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  11716981 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcattaataactttaaaacaacacaatataaacatca 11716898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27555577 - 27555657
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  27555577 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaactcaatgtaatca 27555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 22075431 - 22075347
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatat----catcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22075431 tcatcaagtacacttaacaactcatagatatatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 22075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2076324 - 2076405
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    ||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2076324 tcatcaaatacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 2076405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18918621 - 18918539
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| | ||||||||||||||||    
T  18918621 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactatacaatataatcatcac 18918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 23400716 - 23400775
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  23400716 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt 23400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14470919 - 14471001
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    ||||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  14470919 tcatcaagtacacctaacaactcataaatatcttcatataatcttcatcactaataactt--aaactacacaatataatcatcac 14471001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22947705 - 22947776
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  22947705 tcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 22947776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22951661 - 22951732
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  22951661 tcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 22951732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23870149 - 23870220
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  23870149 tcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 23870220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23874105 - 23874176
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  23874105 tcatcaagtacacttaacaactcatagatatca-----------tcatcactaataactttaaaacaacacaatataatcatc 23874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18953524 - 18953465
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  18953524 tcatcaagtacatttaacaactcctagatgacatcatgtaatcatcatcactaataactt 18953465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 1643321 - 1643372
Alignment:
Q  32 catcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  1643321 catcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 1643372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 16758782 - 16758824
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  16758782 atcatcatcactaataaatttaaaacaacacaatataatcatc 16758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19869225 - 19869294
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  19869225 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 19869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23393679 - 23393748
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  23393679 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 23393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23413587 - 23413656
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  23413587 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 23413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 19869514 - 19869559
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  19869514 tattcatcatcttatcaaaatataatcaacacatactaacaccata 19869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 23393968 - 23394013
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23393968 tattcatcatcttatcaaaatataatcaacacatactaacaccata 23394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 23413876 - 23413921
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23413876 tattcatcatcttatcaaaatataatcaacacatactaacaccata 23413921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 8242788 - 8242832
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  8242788 gtattcatcatcttatgaaaatataatcaacacatactaacacca 8242832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 11565776 - 11565820
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  11565776 gtattcatcatcttatgaaaatataatcaacacatactaacacca 11565820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 12620034 - 12619990
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  12620034 gtattcatcatcttatgaaaatataatcaacacatactaacacca 12619990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 23988874 - 23988918
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  23988874 gtattcatcatcttatgaaaatataatcaacacatactaacacca 23988918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 16759152 - 16759195
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacacca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  16759152 tattcatcatcttataaaaatataatcaacacatactaacacca 16759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 22948031 - 22948074
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacc 338  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  22948031 gtattcatcatcttatgaaaatataatcaacacatactaacacc 22948074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 22951987 - 22952030
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacc 338  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  22951987 gtattcatcatcttatgaaaatataatcaacacatactaacacc 22952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 23870475 - 23870518
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacc 338  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  23870475 gtattcatcatcttatgaaaatataatcaacacatactaacacc 23870518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 23874431 - 23874474
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacc 338  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  23874431 gtattcatcatcttatgaaaatataatcaacacatactaacacc 23874474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23538019 - 23538069
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||| | |||||||||||||| |||||    
T  23538019 tcatcaagtacatttaacaactcatagacaacatcatgtaatcattatcac 23538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27222870 - 27222920
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  27222870 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 27222920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16622873 - 16622921
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| ||||||| |||||||||  |||||||||||||||||    
T  16622873 tcatcaagtacatttaacaattcatagataatatcatgtaatcatcatc 16622921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31479503 - 31479455
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    ||||||| |||| |||||||||||||||||  |||||||||||||||||    
T  31479503 tcatcaaatacatttaacaactcatagataatatcatgtaatcatcatc 31479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12941259 - 12941309
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  12941259 tcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 12941309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 14471255 - 14471300
Alignment:
Q  297 tattcatcatcttataa-aatataatcaacacatactaacaccata 341  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||    
T  14471255 tattcatcttcttatattaatataatcaacacatactaacaccata 14471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25737930 - 25737970
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaa 41  Q
    |||||||||||| ||| ||||||||||||| ||||||||||    
T  25737930 tcatcaagtacatttaccaactcatagataacatcatgtaa 25737970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 27416568 - 27416540
Alignment:
Q  1 tcatcaagtacacttaacaactcatagat 29  Q
    |||||||||||||||||||||||||||||    
T  27416568 tcatcaagtacacttaacaactcatagat 27416540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 34297809 - 34297773
Alignment:
Q  5 caagtacacttaacaactcatagatatcatcatgtaa 41  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  34297809 caagtacatttaacaactcatagataacatcatgtaa 34297773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 3e-39; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19474213 - 19474131
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19474213 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 19474131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20294552 - 20294634
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294552 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20294634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18354835 - 18354915
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18354835 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 18354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24768603 - 24768530
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 74  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24768603 tcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 24768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 20912293 - 20912211
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  20912293 tcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaatacaatataatcatcac 20912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 15238158 - 15238076
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  15238158 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 15238076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22108490 - 22108409
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  22108490 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatagaatcatca 22108409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 40727440 - 40727358
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  40727440 tcatcaagtacaccaaacaacttatagatatcttcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 40727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22120632 - 22120551
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  22120632 tcatcaagtacatttaacaactcatagataacatcatataatcatcatcactaataaatt--aaataacacaatataatcatca 22120551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11219593 - 11219662
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11219593 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11219662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11224179 - 11224248
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11224179 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11224248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11226195 - 11226264
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11226195 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11226264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11228001 - 11228070
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11228001 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11228070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11229991 - 11230060
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||| ||||||    
T  11229991 tcatcaagtacacttaacaactcatagat-----------atcatcatcactaataactttaaaacaacacaatgtaatca 11230060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 19473876 - 19473830
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  19473876 gtattcatcatcttatgaaaatataatcaacacatactaacaccata 19473830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 11219882 - 11219927
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11219882 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11219927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 11224468 - 11224513
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11224468 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11224513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 11226448 - 11226493
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11226448 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11226493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 11230280 - 11230325
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11230280 tattcatcatcttatcaaaatataatcaacacatactaacaccata 11230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 18355189 - 18355234
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacaccata 341  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18355189 tattcatcatcttataaaaatataatcaacacatactaacaccata 18355234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10751855 - 10751903
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  10751855 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 10751903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 20294815 - 20294859
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  20294815 gtattcatcatcttatgaaaatataatcaacacatactaacacca 20294859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 40727112 - 40727069
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacacca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  40727112 tattcatcatcttataaaaatataatcaacacatactaacacca 40727069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19510500 - 19510550
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  19510500 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 19510550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22339050 - 22339100
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  22339050 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 22339100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23113443 - 23113393
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  23113443 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 23113393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28372122 - 28372072
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  28372122 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 28372072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37600049 - 37599999
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  37600049 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 37599999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38146459 - 38146409
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  38146459 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 38146409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41878692 - 41878642
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  41878692 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 41878642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 11228290 - 11228329
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaac 335  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  11228290 tattcatcatcttatcaaaatataatcaacacatactaac 11228329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22335520 - 22335570
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    ||||||| |||| ||||||||||||||||| |||||  |||||||||||||    
T  22335520 tcatcaaatacatttaacaactcatagataacatcacataatcatcatcac 22335570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22749199 - 22749249
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||| ||||||||||| |||||  |||||||||||||    
T  22749199 tcatcaagtacatttaaccactcatagataacatcacataatcatcatcac 22749249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9774978 - 9775014
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcat 37  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  9774978 tcatcaagtacatttaacaactcatagataacatcat 9775014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36459586 - 36459626
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaa 41  Q
    |||| ||||||| ||||||||||||||||| ||||||||||    
T  36459586 tcattaagtacatttaacaactcatagataacatcatgtaa 36459626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 39362991 - 39363027
Alignment:
Q  12 acttaacaactcatagatatcatcatgtaatcatcat 48  Q
    ||||||||||||||||| | |||||||||||||||||    
T  39362991 acttaacaactcatagacaacatcatgtaatcatcat 39363027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9555107 - 9555189
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555107 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 9555189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14759032 - 14758950
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14759032 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14758950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14955800 - 14955718
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955800 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14955718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17807092 - 17807174
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17807092 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 17807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 25688480 - 25688562
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688480 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 25688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 4562814 - 4562732
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4562814 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacccaatataatcatc 4562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5758496 - 5758414
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5758496 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatagaatcatc 5758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33740874 - 33740956
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33740874 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataattttaaaacaacacaatataatcatc 33740956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20158488 - 20158408
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20158488 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 20158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20163939 - 20163859
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20163939 tcatcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20163859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 20161162 - 20161084
Alignment:
Q  3 atcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20161162 atcaagtacacttaacaactcatagatatcatcatgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12486309 - 12486388
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  12486309 tcatcaagtacacttaacaactcatagatatcatcatgta---atcatcactaataactttaaaacaacacaatataatcatc 12486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 23997007 - 23996925
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23997007 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatcac 23996925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10711863 - 10711943
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10711863 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10925633 - 10925713
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10925633 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12422981 - 12423062
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12422981 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 12423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17052486 - 17052405
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  17052486 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 17052405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 631788 - 631706
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  631788 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 631706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 22634967 - 22634885
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  22634967 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatatgatcatcac 22634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 27532790 - 27532872
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  27532790 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 27532872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13813873 - 13813820
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 54  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13813873 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13818361 - 13818308
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaa 54  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  13818361 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaa 13818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24048425 - 24048375
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24048425 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 24048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 12486570 - 12486615
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12486570 tattcatcatcttatcaaaatataatcaacacatactaacaccata 12486615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 4562477 - 4562433
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  4562477 gtattcatcatcttatgaaaatataatcaacacatactaacacca 4562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 9555444 - 9555488
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  9555444 gtattcatcatcttatgaaaatataatcaacacatactaacacca 9555488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 14758618 - 14758574
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14758618 gtattcatcatcttatgaaaatataatcaacacatactaacacca 14758574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 14955383 - 14955339
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14955383 gtattcatcatcttatgaaaatataatcaacacatactaacacca 14955339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15223584 - 15223632
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  15223584 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 15223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 33741214 - 33741258
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  33741214 gtattcatcatcttatgaaaatataatcaacacatactaacacca 33741258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 5758001 - 5757958
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5758001 tattcatcatcttatgaaaatataatcaacacatactaacacca 5757958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Original strand, 25688817 - 25688860
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacc 338  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  25688817 gtattcatcatcttatgaaaatataatcaacacatactaacacc 25688860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15533257 - 15533307
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  15533257 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 15533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18211642 - 18211692
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  18211642 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 18211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49549123 - 49549073
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  49549123 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 49549073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30145821 - 30145872
Alignment:
Q  1 tcatcaagtacacttaacaactcatag-atatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||||||    
T  30145821 tcatcaagtacatttaacaactcatagcttaacatcatgtaatcatcatcac 30145872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36036990 - 36037040
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  36036990 tcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 36037040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7108276 - 7108358
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108276 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7112211 - 7112293
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112211 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 11068651 - 11068733
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11068651 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11068733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22320167 - 22320249
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320167 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22320249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22335222 - 22335304
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335222 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 55021414 - 55021496
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55021414 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 55021496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11167134 - 11167052
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11167134 tcatcaagtaaacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14497985 - 14498067
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14497985 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 14498067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28948499 - 28948581
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28948499 tcatcaagtacacttaacaacttatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 28948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 5219885 - 5219965
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5219885 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 5219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11853744 - 11853824
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11853744 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 11853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 37440721 - 37440641
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37440721 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 37440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 15616218 - 15616297
Alignment:
Q  4 tcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15616218 tcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacattataatcatc 15616297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 11301706 - 11301626
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  11301706 tcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 11301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14664463 - 14664543
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14664463 tcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14667627 - 14667707
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14667627 tcatcaagtacacttaacaactcatagatctcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16795541 - 16795622
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  16795541 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 16795622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12853404 - 12853325
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcat 82  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12853404 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcat 12853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18933396 - 18933337
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18933396 tcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 18933337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30064423 - 30064482
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30064423 tcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 30064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4590201 - 4590119
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||| ||||    
T  4590201 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcgtcac 4590119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14670064 - 14670142
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||   |||||||||||||||||  ||||||||||||||||||||||    
T  14670064 tcatcaagtacatttaacaactcatagataacatcatgta---atcatcactaataactt--aaacaacacaatataatcatca 14670142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15463916 - 15463999
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatc-atcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  15463916 tcatcaagtacatttaacaactcatatataacatcctgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 15463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 14068103 - 14068021
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    ||||||| |||| ||| |||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  14068103 tcatcaaatacatttagcaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 14068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 17318550 - 17318468
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| | ||||||| |||||||||||||||||||  |||| ||||||||||||||||||    
T  17318550 tcatcaagtacatttaacaactcctagataacttcatgtattcatcatcactaataactt--aaactacacaatataatcatcac 17318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12337294 - 12337348
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 57  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12337294 tcatcaagtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 12337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 4112649 - 4112607
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4112649 atcatcatcactaataactttaaaacaacacaatataatcatc 4112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 4108800 - 4108759
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatcat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4108800 atcatcatcactaataactttaaaacaacacaatataatcat 4108759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10834982 - 10834935
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcat 48  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10834982 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcat 10834935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 14681588 - 14681664
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| |||||||||||  |||| ||||||||||||||||   ||||||||||  ||||||||||||||||||||||    
T  14681588 tcatcaagtacatttaacaactca--gataacatcatgtaatcatca---ctaataactt--aaacaacacaatataatcatca 14681664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 11069065 - 11069111
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  11069065 gtattcatcatcttatgaaaatataatcaacacatactaacaccata 11069111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13435856 - 13435906
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  13435856 tcatcaagtacatttaacaactcatatataacatcatgtaatcatcatcac 13435906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 8928907 - 8928858
Alignment:
Q  2 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  8928907 catcaagtacatttaacaactcatagataacatcatgcaatcatcatcac 8928858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 15963824 - 15963869
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15963824 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15963869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 15967748 - 15967793
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15967748 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15967793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 15971672 - 15971717
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15971672 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15971717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 7108613 - 7108657
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  7108613 gtattcatcatcttatgaaaatataatcaacacatactaacacca 7108657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 7112548 - 7112592
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  7112548 gtattcatcatcttatgaaaatataatcaacacatactaacacca 7112592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 11166720 - 11166676
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  11166720 gtattcatcatcttatgaaaatataatcaacacatactaacacca 11166676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 14498322 - 14498366
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  14498322 gtattcatcatcttatgaaaatataatcaacacatactaacacca 14498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 15616552 - 15616596
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  15616552 gtattcatcatcttatgaaaatataatcaacacatactaacacca 15616596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 15963564 - 15963604
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15963564 atcatcatcactaataactttaaaacaacacaatgtaatca 15963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 15967488 - 15967528
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15967488 atcatcatcactaataactttaaaacaacacaatgtaatca 15967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 15971412 - 15971452
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15971412 atcatcatcactaataactttaaaacaacacaatgtaatca 15971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 22320581 - 22320625
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  22320581 gtattcatcatcttatgaaaatataatcaacacatactaacacca 22320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 22335636 - 22335680
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  22335636 gtattcatcatcttatgaaaatataatcaacacatactaacacca 22335680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 28948759 - 28948803
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  28948759 gtattcatcatcttatgaaaatataatcaacacatactaacacca 28948803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 30064764 - 30064808
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  30064764 gtattcatcatcttatgaaaatataatcaacacatactaacacca 30064808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 55021902 - 55021946
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  55021902 gtattcatcatcttatgaaaatataatcaacacatactaacacca 55021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 4108430 - 4108387
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacacca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4108430 tattcatcatcttataaaaatataatcaacacatactaacacca 4108387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 4112282 - 4112239
Alignment:
Q  297 tattcatcatcttataaaa-tataatcaacacatactaacacca 339  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4112282 tattcatcatcttataaaaatataatcaacacatactaacacca 4112239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16751942 - 16751895
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcat 48  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  16751942 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcat 16751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3802008 - 3802058
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  3802008 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 3802058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 14067718 - 14067672
Alignment:
Q  296 gtattcatcatcttata-aaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14067718 gtattcatcatcttatataaatataatcaacacatactgacaccata 14067672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14764836 - 14764786
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  14764836 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 14764786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20249890 - 20249840
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  20249890 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 20249840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29545979 - 29545929
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  29545979 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 29545929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 54519635 - 54519685
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  54519635 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 54519685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18899491 - 18899540
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatca 50  Q
    |||||||||||| ||||||||||||||||| |||||  ||||||||||||    
T  18899491 tcatcaagtacatttaacaactcatagataacatcacataatcatcatca 18899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11912465 - 11912505
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaa 41  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  11912465 tcatcaagtacatttaacaactcatagataacatcatgtaa 11912505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9532296 - 9532346
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  9532296 tcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 9532346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12304212 - 12304262
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||   |||||||||||||    
T  12304212 tcatcaagtacatttaacaactcatagataacatctcataatcatcatcac 12304262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23372584 - 23372534
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||| ||| |||||  |||||||||||||    
T  23372584 tcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 23372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51299571 - 51299621
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||| ||| |||||  |||||||||||||    
T  51299571 tcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 51299621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4108830 - 4108793
Alignment:
Q  1 tcatcaagtacactt-aacaactcatagatatcatcat 37  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4108830 tcatcaagtacactttaacaactcatagatatcatcat 4108793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4112679 - 4112642
Alignment:
Q  1 tcatcaagtacactt-aacaactcatagatatcatcat 37  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4112679 tcatcaagtacactttaacaactcatagatatcatcat 4112642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8491773 - 8491732
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||| |||||| |||||||||||    
T  8491773 tcatcaagtacatttaacaactcctagataacatcatgtaat 8491732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 8490395 - 8490350
Alignment:
Q  38 gtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    ||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  8490395 gtaatcaccatcactaataactt--aaactacacaatataatcatcac 8490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19774236 - 19774284
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| ||||||||||| ||| |  |||||||||||||||||    
T  19774236 tcatcaagtacatttaacaactcacagacaatatcatgtaatcatcatc 19774284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24630088 - 24630006
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630088 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24630006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24645189 - 24645271
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24645189 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24645271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 24647965 - 24648047
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24647965 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24648047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27600409 - 27600491
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600409 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 27600491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30346698 - 30346616
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346698 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 30346616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 10103337 - 10103255
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10103337 tcatcaagtacacttaacaactcatagatatcaacatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 10103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12902647 - 12902565
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12902647 tcatcaagtacacttaacaactcatagatatcattatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27381034 - 27380952
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27381034 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27380952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27385004 - 27384922
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27385004 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 31343955 - 31344035
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31343955 tcatcaagtacacctaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 31344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9784032 - 9784113
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  9784032 tcatcaagtacattaaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataattatca 9784113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 41532483 - 41532414
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||    
T  41532483 tcatcaagtacacttaacaactcatagatatcatcat-----------cactaataactttaaaacaacacaatgtaatca 41532414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 41532194 - 41532149
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  41532194 tattcatcatcttatcaaaatataatcaacacatactaacaccata 41532149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10103000 - 10102956
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  10103000 gtattcatcatcttatgaaaatataatcaacacatactaacacca 10102956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 24629671 - 24629627
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  24629671 gtattcatcatcttatgaaaatataatcaacacatactaacacca 24629627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 27380544 - 27380500
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  27380544 gtattcatcatcttatgaaaatataatcaacacatactaacacca 27380500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 27384590 - 27384546
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  27384590 gtattcatcatcttatgaaaatataatcaacacatactaacacca 27384546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 27600746 - 27600790
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  27600746 gtattcatcatcttatgaaaatataatcaacacatactaacacca 27600790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 30346207 - 30346163
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  30346207 gtattcatcatcttatgaaaatataatcaacacatactaacacca 30346163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6481822 - 6481872
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  6481822 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 6481872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6485289 - 6485339
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  6485289 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 6485339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19663598 - 19663548
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  19663598 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 19663548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20260295 - 20260345
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  20260295 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 20260345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21074548 - 21074498
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||||||  ||||||||||    
T  21074548 tcatcaagtacatttaacaactcatagataacatcatgttgtcatcatcac 21074498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24647132 - 24647166
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  24647132 tcatcaagtacacttaacaactcatagatatcatc 24647166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 1282351 - 1282396
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1282351 tattcatcatcttatcaaaatgtaatcaacacatactaacaccata 1282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9240712 - 9240759
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcat 48  Q
    |||||||||||| ||||||||||||||||| |||||  ||||||||||    
T  9240712 tcatcaagtacatttaacaactcatagataacatcacataatcatcat 9240759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1009300 - 1009382
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009300 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1926836 - 1926754
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926836 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1926754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16376856 - 16376774
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376856 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16376774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20925850 - 20925768
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925850 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20925768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 52634306 - 52634388
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634306 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 52634388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33796071 - 33796151
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33796071 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 33796151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 22132139 - 22132058
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22132139 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 22132058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 21406291 - 21406373
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  21406291 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21406373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41801319 - 41801238
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  41801319 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 41801238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20230179 - 20230120
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20230179 tcatcaagtacacttaacaactcatagataacatcatgtaatcatcatcactaataactt 20230120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 1009637 - 1009681
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  1009637 gtattcatcatcttatgaaaatataatcaacacatactaacacca 1009681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 1926345 - 1926301
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  1926345 gtattcatcatcttatgaaaatataatcaacacatactaacacca 1926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 16376596 - 16376552
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  16376596 gtattcatcatcttatgaaaatataatcaacacatactaacacca 16376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 20925359 - 20925315
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  20925359 gtattcatcatcttatgaaaatataatcaacacatactaacacca 20925315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39245211 - 39245163
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  39245211 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 39245163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39248766 - 39248718
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  39248766 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 39248718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41389705 - 41389657
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatc 49  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  41389705 tcatcaagtacatttaacaactcatagataatatcatgtaatcatcatc 41389657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 52634723 - 52634767
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  52634723 gtattcatcatcttatgaaaatataatcaacacatactaacacca 52634767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16370963 - 16371013
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  16370963 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 16371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 33796462 - 33796503
Alignment:
Q  301 catcatcttataaaa-tataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  33796462 catcatcttataaaaatataatcaacacatactaacaccata 33796503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11809990 - 11809949
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||||||| || |||||||||||    
T  11809990 tcatcaagtacatttaacaactcataggtaacatcatgtaat 11809949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 68595 - 68514
Alignment:
Q  2 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  68595 catcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 68514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 68371 - 68328
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  68371 tattcatcatcttatgaaaatataatcaacacatactaacacca 68328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6361 - 6279
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6361 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 6211 - 6167
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  6211 gtattcatcatcttatgaaaatataatcaacacatactaacacca 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 60366 - 60283
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataac-tttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  60366 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataacttttaaaacaacacaatataatcatc 60283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 11089 - 11170
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11089 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaa-ataatcatc 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 11431 - 11475
Alignment:
Q  296 gtattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  11431 gtattcatcatcttatgaaaatataatcaacacatactaacacca 11475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 861 - 781
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  861 tcatcaagtacacttaacaactcatagatatcatcatgcaatcatcatcactaataactttaaaacaacacaatgtaatca 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14882 - 14962
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14882 tcatcaagtacacttaacaactcatagatatcttcatgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11100 - 11027
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 74  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11100 tcatcaggtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaat 11027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8615 - 8695
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  8615 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaaaaacactatgtaatca 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34168 - 34089
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatc 83  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||    
T  34168 tcatcaagtacacttaacaactcatagatatcatcatgtaatc---atcactaataactttaaaacaacacaatataatcatc 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 33907 - 33862
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33907 tattcatcatcttatcaaaatataatcaacacatactaacaccata 33862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 11815 - 11895
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  11815 tcatcaagtacacttaacaactcatagatttcatcatgtaatcatcatcactaataattttaaaacaacacaatgtaatca 11895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21380 - 21298
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21380 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 21298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7001 - 6920
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7001 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcactaataactt--aaacaacacaatataatcatca 6920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25608 - 25526
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  25608 tcatcaagtacatttaacaactcatagataacatcatgtattcatcatcactaataactt--aaacaacacaatataatcatcac 25526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4012 - 4094
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  4012 tcatcaagtacatttaacaactcctagataacatcatgtaatcataatcactaataactt--aaactacacaatataatcatcac 4094  T

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Target: scaffold0380; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 1 - 42
Alignment:
Q  42 tcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||||||||||||||||||  |||| ||||||||||||||||||    
T  1 tcatcatcactaataactt--aaactacacaatataatcatcac 42  T

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Target: scaffold0142 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8780 - 8699
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  8780 tcatcatgtacatttaacaactcgtagataacatcatgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 8699  T

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Target: scaffold0013 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 74372 - 74291
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| ||  ||||||||| ||||||||||||    
T  74372 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcttcactaataaatt--aaacaacaccatataatcatca 74291  T

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Target: scaffold0327 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 18861 - 18942
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||| ||||||| |||||  ||||||||||||||||||||  | ||||||||||||||||||||||    
T  18861 tcatcaagtacatttaacaacttatagataacatcacataatcatcatcactaataac--tgaaacaacacaatataatcatca 18942  T

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Target: scaffold0109 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37238 - 37179
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  37238 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 37179  T

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Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 62880 - 62821
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactt 60  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  62880 tcatcaagtacatttaacaactcctagataacatcatgtaatcatcatcactaataactt 62821  T

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Target: scaffold0029; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Original strand, 79489 - 79535
Alignment:
Q  296 gtattcatcatcttata-aaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  79489 gtattcatcatcttacataaatataatcaacacatactaacaccata 79535  T

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Target: scaffold0299 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5863 - 5917
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataa 57  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5863 tcatcaagtacacttaacaactcata--tatcatcatgtaatcatcatcactaataa 5917  T

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Target: scaffold0031 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37243 - 37161
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac-taataactttaaaacaacacaatataatcatca 84  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| | |||||||||  | || |||||||||||||||||    
T  37243 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatctcataataactt--agaccacacaatataatcatca 37161  T

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Target: scaffold0080 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28510 - 28560
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  28510 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 28560  T

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Target: scaffold0080; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33975 - 34025
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  33975 tcatcaagtacatttaacaactcatagataacatcatgtaatcatcatcac 34025  T

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Target: scaffold0525 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 5571 - 5489
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 85  Q
    ||||||||||||| ||| |||||||| ||||| |||| ||||||||||||||||||||||    || ||||||||||||||||||    
T  5571 tcatcaagtacacctaagaactcataaatatcttcatataatcatcatcactaataactt--ggactacacaatataatcatcac 5489  T

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Target: scaffold0525; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 5049 - 5006
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacacca 339  Q
    ||||||||||||||| |||| |||||||||||||||||||||||    
T  5049 tattcatcatcttatgaaaacataatcaacacatactaacacca 5006  T

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Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 15615 - 15546
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||    
T  15615 tcatcaagtacacttaacaactcatagatatcatcat-----------cactaataactttaaaacaacacaatgtaatca 15546  T

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Target: scaffold0141; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 15326 - 15281
Alignment:
Q  297 tattcatcatcttat-aaaatataatcaacacatactaacaccata 341  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15326 tattcatcatcttatcaaaatataatcaacacatactaacaccata 15281  T

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Target: scaffold0200 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 10834 - 10874
Alignment:
Q  41 atcatcatcactaataactttaaaacaacacaatataatca 81  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  10834 atcatcatcactaataactttaaaacaacacaatgtaatca 10874  T

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Target: scaffold1427 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 238 - 288
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  238 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 288  T

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Target: scaffold0842 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5280 - 5330
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  5280 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 5330  T

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Target: scaffold0337 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10862 - 10812
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  10862 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 10812  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 109639 - 109689
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  109639 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 109689  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 224183 - 224133
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||    
T  224183 tcatcaagtacatttaacaactcatagataacatcacataatcatcatcac 224133  T

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Target: scaffold1873 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 691 - 753
Alignment:
Q  22 tcatagatatcatcatgtaatcatca-tcactaataactttaaaacaacacaatataatcatcac 85  Q
    |||| |||| ||||||||||||| || |||||||||||||  |||||||||||||||||||||||    
T  691 tcatggataacatcatgtaatcaccaatcactaataactt--aaacaacacaatataatcatcac 753  T

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Target: scaffold0599 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4159 - 4199
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaa 41  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  4159 tcatcaagtacatttaacaactcatagataacatcatgtaa 4199  T

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Target: scaffold0544 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3557 - 3507
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    |||||||||||| ||||||||||||| ||| |||||  |||||||||||||    
T  3557 tcatcaagtacatttaacaactcataaataacatcacataatcatcatcac 3507  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23978 - 23937
Alignment:
Q  1 tcatcaagtacacttaacaactcatagatatcatcatgtaat 42  Q
    |||||||||||| |||||||||| |||||| |||||||||||    
T  23978 tcatcaagtacatttaacaactcctagataacatcatgtaat 23937  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 153840 - 153803
Alignment:
Q  14 ttaacaactcatagatatcatcatgtaatcatcatcac 51  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  153840 ttaacaactcatagatgacatcatgtaatcatcatcac 153803  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 70793 - 70821
Alignment:
Q  1 tcatcaagtacacttaacaactcatagat 29  Q
    |||||||||||||||||||||||||||||    
T  70793 tcatcaagtacacttaacaactcatagat 70821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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