View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9913A_low_93 (Length: 341)

Name: NF9913A_low_93
Description: NF9913A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9913A_low_93
NF9913A_low_93
[»] chr4 (40 HSPs)
chr4 (10-331)||(8980123-8980444)
chr4 (10-331)||(13700446-13700767)
chr4 (10-331)||(21299671-21299992)
chr4 (21-331)||(8985243-8985553)
chr4 (21-331)||(21304791-21305101)
chr4 (10-331)||(54991422-54991733)
chr4 (21-331)||(41393192-41393491)
chr4 (28-331)||(51019222-51019514)
chr4 (16-331)||(53797572-53797875)
chr4 (10-331)||(13710605-13710915)
chr4 (23-331)||(9763866-9764167)
chr4 (39-331)||(47046155-47046438)
chr4 (10-240)||(36359228-36359460)
chr4 (21-308)||(13695106-13695385)
chr4 (10-240)||(54348290-54348523)
chr4 (21-241)||(36354121-36354343)
chr4 (28-240)||(40003979-40004193)
chr4 (26-240)||(39999019-39999235)
chr4 (26-240)||(54343153-54343369)
chr4 (66-177)||(653035-653146)
chr4 (64-177)||(10120801-10120914)
chr4 (65-171)||(24490022-24490129)
chr4 (63-175)||(34644546-34644659)
chr4 (74-169)||(37259877-37259973)
chr4 (95-177)||(8083019-8083102)
chr4 (74-169)||(31269033-31269129)
chr4 (64-148)||(39319621-39319706)
chr4 (186-231)||(54990687-54990732)
chr4 (64-174)||(10318774-10318885)
chr4 (293-331)||(54990648-54990686)
chr4 (99-175)||(30564408-30564485)
chr4 (74-169)||(5271419-5271515)
chr4 (74-169)||(13521992-13522088)
chr4 (74-169)||(31273520-31273616)
chr4 (74-169)||(33463356-33463452)
chr4 (74-169)||(37264564-37264660)
chr4 (95-169)||(31765906-31765981)
chr4 (125-175)||(17682503-17682553)
chr4 (93-169)||(17359550-17359627)
chr4 (97-169)||(51697939-51698012)
[»] chr3 (47 HSPs)
chr3 (10-331)||(17368655-17368976)
chr3 (21-331)||(55128736-55129047)
chr3 (39-331)||(54270609-54270891)
chr3 (39-331)||(34129018-34129299)
chr3 (10-331)||(3476794-3477106)
chr3 (39-331)||(17357801-17358084)
chr3 (39-331)||(4117440-4117730)
chr3 (21-331)||(3482261-3482572)
chr3 (27-331)||(10321395-10321689)
chr3 (21-240)||(30341773-30341993)
chr3 (10-240)||(20090591-20090824)
chr3 (14-240)||(20095716-20095945)
chr3 (10-240)||(15762959-15763193)
chr3 (26-240)||(15768120-15768336)
chr3 (10-181)||(17364001-17364172)
chr3 (64-177)||(20810362-20810475)
chr3 (64-177)||(33089335-33089448)
chr3 (64-177)||(13022017-13022130)
chr3 (64-170)||(53119517-53119623)
chr3 (64-177)||(38436983-38437096)
chr3 (64-177)||(26962049-26962162)
chr3 (74-175)||(21494296-21494398)
chr3 (63-170)||(2617255-2617363)
chr3 (101-169)||(1741109-1741178)
chr3 (80-164)||(25023929-25024014)
chr3 (74-169)||(758368-758464)
chr3 (74-169)||(23666123-23666219)
chr3 (74-169)||(24038371-24038467)
chr3 (74-169)||(39775728-39775824)
chr3 (74-169)||(49971424-49971520)
chr3 (74-169)||(8069677-8069772)
chr3 (99-167)||(26706808-26706877)
chr3 (74-169)||(3672583-3672679)
chr3 (74-169)||(3692615-3692711)
chr3 (74-169)||(14438695-14438791)
chr3 (74-169)||(18467222-18467318)
chr3 (74-169)||(20520051-20520147)
chr3 (128-171)||(795403-795446)
chr3 (79-153)||(1688902-1688977)
chr3 (95-167)||(16013727-16013801)
chr3 (66-171)||(10586181-10586286)
chr3 (63-172)||(27605132-27605242)
chr3 (128-169)||(27708988-27709029)
chr3 (74-169)||(32474680-32474774)
chr3 (74-169)||(7571218-7571314)
chr3 (125-169)||(18472056-18472100)
chr3 (125-169)||(23661464-23661508)
[»] chr1 (29 HSPs)
chr1 (10-331)||(37404254-37404575)
chr1 (10-331)||(27716379-27716700)
chr1 (21-331)||(37409375-37409685)
chr1 (18-314)||(11387666-11387981)
chr1 (54-331)||(11250961-11251228)
chr1 (10-331)||(5730042-5730351)
chr1 (39-331)||(3584566-3584847)
chr1 (93-331)||(27711323-27711580)
chr1 (34-327)||(5724939-5725221)
chr1 (19-331)||(48246532-48246825)
chr1 (26-240)||(36684644-36684860)
chr1 (22-233)||(34318160-34318373)
chr1 (64-177)||(39747157-39747270)
chr1 (66-169)||(10106095-10106198)
chr1 (66-177)||(13890805-13890916)
chr1 (64-170)||(38734265-38734371)
chr1 (64-171)||(26651164-26651271)
chr1 (64-170)||(5602424-5602530)
chr1 (95-170)||(14582120-14582195)
chr1 (19-62)||(27711272-27711315)
chr1 (85-175)||(25188266-25188357)
chr1 (74-169)||(10135455-10135551)
chr1 (79-169)||(33301180-33301271)
chr1 (95-177)||(19422866-19422952)
chr1 (97-169)||(51041463-51041535)
chr1 (95-169)||(19799013-19799088)
chr1 (66-171)||(41097950-41098055)
chr1 (74-169)||(12259995-12260091)
chr1 (74-169)||(23192817-23192913)
[»] scaffold0517 (1 HSPs)
scaffold0517 (10-331)||(3499-3820)
[»] chr5 (37 HSPs)
chr5 (10-331)||(17509994-17510315)
chr5 (19-331)||(17504898-17505210)
chr5 (10-331)||(41858530-41858850)
chr5 (21-331)||(42019520-42019830)
chr5 (20-325)||(41853495-41853799)
chr5 (21-331)||(36253773-36254082)
chr5 (20-331)||(1413901-1414201)
chr5 (27-331)||(26709055-26709349)
chr5 (27-331)||(26978789-26979083)
chr5 (151-331)||(43579737-43579917)
chr5 (10-331)||(24771203-24771516)
chr5 (27-331)||(24776658-24776958)
chr5 (66-177)||(13582682-13582793)
chr5 (66-177)||(14374127-14374238)
chr5 (66-177)||(24435861-24435972)
chr5 (69-177)||(7805066-7805174)
chr5 (63-169)||(28857850-28857958)
chr5 (74-169)||(37248795-37248891)
chr5 (56-169)||(31986708-31986822)
chr5 (74-169)||(26667271-26667367)
chr5 (74-169)||(26938868-26938964)
chr5 (74-169)||(29167973-29168069)
chr5 (80-169)||(12103030-12103120)
chr5 (81-169)||(36423643-36423732)
chr5 (74-169)||(556694-556790)
chr5 (74-169)||(561466-561562)
chr5 (74-169)||(7451757-7451853)
chr5 (74-169)||(36428708-36428804)
chr5 (74-169)||(36937511-36937607)
chr5 (74-169)||(36942265-36942361)
chr5 (74-169)||(41996664-41996760)
chr5 (287-331)||(42024566-42024610)
chr5 (125-169)||(10759820-10759864)
chr5 (74-169)||(32461549-32461645)
chr5 (125-169)||(35679875-35679919)
chr5 (74-169)||(37652830-37652926)
chr5 (74-169)||(42001433-42001529)
[»] chr6 (34 HSPs)
chr6 (10-331)||(29491074-29491396)
chr6 (26-331)||(21396651-21396956)
chr6 (21-331)||(22703204-22703514)
chr6 (10-331)||(21401690-21401998)
chr6 (20-331)||(24191221-24191532)
chr6 (20-331)||(24192318-24192629)
chr6 (26-331)||(34375871-34376175)
chr6 (39-331)||(2817996-2818277)
chr6 (39-331)||(34142041-34142335)
chr6 (39-331)||(34154657-34154951)
chr6 (17-331)||(31981506-31981809)
chr6 (10-240)||(22698172-22698405)
chr6 (64-171)||(13605090-13605197)
chr6 (177-301)||(6728285-6728398)
chr6 (64-177)||(19478138-19478251)
chr6 (74-170)||(5600971-5601068)
chr6 (74-174)||(12182995-12183096)
chr6 (64-167)||(3901902-3902006)
chr6 (63-169)||(10642698-10642805)
chr6 (64-177)||(31476007-31476120)
chr6 (34-107)||(6728397-6728472)
chr6 (95-175)||(5740784-5740865)
chr6 (64-177)||(31495833-31495946)
chr6 (64-177)||(31501219-31501332)
chr6 (94-169)||(17964559-17964635)
chr6 (95-169)||(24589164-24589239)
chr6 (74-175)||(6112967-6113068)
chr6 (64-177)||(29325525-29325639)
chr6 (74-171)||(31515729-31515826)
chr6 (125-169)||(12689022-12689066)
chr6 (64-171)||(17281561-17281669)
chr6 (85-149)||(13660040-13660105)
chr6 (74-169)||(11570749-11570845)
chr6 (125-169)||(11614092-11614136)
[»] chr2 (27 HSPs)
chr2 (10-331)||(40518310-40518631)
chr2 (21-331)||(40392266-40392576)
chr2 (21-331)||(28751578-28751877)
chr2 (10-240)||(42723380-42723613)
chr2 (10-240)||(44754525-44754759)
chr2 (21-240)||(44096247-44096468)
chr2 (26-240)||(42728549-42728765)
chr2 (26-240)||(44759691-44759907)
chr2 (64-171)||(42914632-42914739)
chr2 (250-331)||(4163426-4163507)
chr2 (82-171)||(5089286-5089375)
chr2 (21-72)||(4163525-4163575)
chr2 (74-169)||(9189803-9189899)
chr2 (74-169)||(30658262-30658358)
chr2 (74-169)||(9180724-9180820)
chr2 (74-169)||(10160724-10160820)
chr2 (97-174)||(28945191-28945269)
chr2 (74-170)||(160040-160137)
chr2 (74-169)||(1934993-1935089)
chr2 (74-169)||(18344430-18344526)
chr2 (74-169)||(25478297-25478393)
chr2 (74-169)||(25497325-25497421)
chr2 (93-170)||(11658887-11658965)
chr2 (66-146)||(19538377-19538458)
chr2 (66-169)||(6297886-6297989)
chr2 (74-169)||(30650928-30651024)
chr2 (125-165)||(42926763-42926803)
[»] scaffold0594 (1 HSPs)
scaffold0594 (10-331)||(9057-9367)
[»] chr8 (30 HSPs)
chr8 (12-331)||(21643930-21644239)
chr8 (21-331)||(17955638-17955938)
chr8 (21-331)||(24884660-24884959)
chr8 (27-309)||(42514245-42514516)
chr8 (39-331)||(43999079-43999360)
chr8 (10-240)||(32015634-32015866)
chr8 (155-331)||(21643490-21643652)
chr8 (64-177)||(19430004-19430117)
chr8 (64-177)||(19435506-19435619)
chr8 (64-177)||(19566153-19566266)
chr8 (64-177)||(19571655-19571768)
chr8 (74-177)||(33616719-33616822)
chr8 (64-177)||(31030518-31030631)
chr8 (262-331)||(21642740-21642809)
chr8 (262-331)||(21643115-21643184)
chr8 (20-131)||(32010482-32010595)
chr8 (262-330)||(21641616-21641684)
chr8 (262-330)||(21641991-21642059)
chr8 (262-330)||(21642366-21642434)
chr8 (79-177)||(13584355-13584461)
chr8 (176-240)||(32010595-32010659)
chr8 (74-169)||(31449866-31449962)
chr8 (74-169)||(38182237-38182333)
chr8 (125-169)||(43302718-43302762)
chr8 (74-169)||(44925923-44926019)
chr8 (74-167)||(1807471-1807565)
chr8 (80-169)||(15875668-15875758)
chr8 (74-169)||(19166633-19166729)
chr8 (74-169)||(33416546-33416642)
chr8 (74-169)||(40125885-40125981)
[»] chr7 (31 HSPs)
chr7 (21-331)||(16539261-16539559)
chr7 (21-331)||(16626103-16626401)
chr7 (34-331)||(2234479-2234765)
chr7 (18-331)||(21080888-21081191)
chr7 (18-331)||(43892801-43893115)
chr7 (21-331)||(42571893-42572191)
chr7 (21-265)||(47177024-47177268)
chr7 (18-331)||(12934344-12934643)
chr7 (39-331)||(17495367-17495649)
chr7 (39-331)||(17557565-17557847)
chr7 (21-331)||(32212502-32212803)
chr7 (34-331)||(19309460-19309746)
chr7 (10-240)||(47998908-47999141)
chr7 (10-240)||(33243111-33243345)
chr7 (26-240)||(33237952-33238168)
chr7 (30-240)||(47993754-47993966)
chr7 (21-141)||(22857715-22857835)
chr7 (79-177)||(33226419-33226517)
chr7 (64-169)||(9973452-9973557)
chr7 (64-177)||(24528344-24528457)
chr7 (64-166)||(28292506-28292607)
chr7 (74-169)||(4579507-4579603)
chr7 (93-175)||(19640317-19640399)
chr7 (74-167)||(3357634-3357728)
chr7 (65-169)||(8076040-8076145)
chr7 (74-169)||(9650967-9651063)
chr7 (74-169)||(23246933-23247029)
chr7 (74-169)||(23866067-23866163)
chr7 (74-169)||(26341198-26341294)
chr7 (66-171)||(27256234-27256339)
chr7 (74-169)||(44510677-44510773)
[»] scaffold0060 (1 HSPs)
scaffold0060 (21-331)||(36958-37256)
[»] scaffold0014 (2 HSPs)
scaffold0014 (10-240)||(31481-31711)
scaffold0014 (17-240)||(26313-26539)
[»] scaffold0166 (2 HSPs)
scaffold0166 (10-331)||(13588-13900)
scaffold0166 (27-331)||(19041-19341)
[»] scaffold0055 (1 HSPs)
scaffold0055 (19-240)||(3001-3224)
[»] scaffold0052 (1 HSPs)
scaffold0052 (19-240)||(81311-81534)
[»] scaffold0011 (2 HSPs)
scaffold0011 (80-177)||(7052-7149)
scaffold0011 (79-177)||(1570-1668)
[»] scaffold0132 (2 HSPs)
scaffold0132 (64-176)||(2765-2877)
scaffold0132 (64-176)||(10725-10837)
[»] scaffold0067 (1 HSPs)
scaffold0067 (64-169)||(33968-34074)
[»] scaffold0352 (1 HSPs)
scaffold0352 (74-169)||(7103-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (74-169)||(9887-9983)
[»] scaffold0057 (1 HSPs)
scaffold0057 (95-169)||(35654-35729)
[»] scaffold0045 (1 HSPs)
scaffold0045 (74-169)||(83065-83161)
[»] scaffold0002 (1 HSPs)
scaffold0002 (74-169)||(4073-4169)


Alignment Details
Target: chr4 (Bit Score: 298; Significance: 1e-167; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 8980444 - 8980123
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  8980444 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 8980345  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8980344 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 8980245  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980244 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 8980145  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  8980144 agaaagaacggttcgtcaacac 8980123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 13700446 - 13700767
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  13700446 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 13700545  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13700546 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 13700645  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700646 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 13700745  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  13700746 agaaagaacggttcgtcaacac 13700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 21299992 - 21299671
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  21299992 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 21299893  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21299892 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 21299793  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299792 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 21299693  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  21299692 agaaagaacggttcgtcaacac 21299671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 8985553 - 8985243
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  8985553 tgttgtgtttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 8985454  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985453 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 8985354  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8985353 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 8985254  T
Q  321 ttcgtcaacac 331  Q
    |||||||||||    
T  8985253 ttcgtcaacac 8985243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 21305101 - 21304791
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||||| |||||||    
T  21305101 tgttgattttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacttttcgcggcactacc 21305002  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21305001 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggttgcactgccagaaatcgctcga 21304902  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21304901 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 21304802  T
Q  321 ttcgtcaacac 331  Q
    |||||||||||    
T  21304801 ttcgtcaacac 21304791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 54991422 - 54991733
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  54991422 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacaaagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 54991521  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  54991522 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 54991621  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  54991622 aaatcgctcgagaataacacctcaatatggt----------tttcgaaaaaccactctaatatggtacgtaaaccactcgataaaccaaagaaggagaaa 54991711  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  54991712 agaaagaacggttcgtcaacac 54991733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 41393192 - 41393491
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  41393192 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 41393291  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41393292 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcacagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 41393391  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    ||||||||||||||||||           |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||  ||||||| |    
T  41393392 gaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggttcgcagaccactcgagaaaccaaagaaggaggaagaaaagaacgg 41393480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 28 - 331
Target Start/End: Complemental strand, 51019514 - 51019222
Alignment:
Q  28 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  51019514 tttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttg 51019415  T
Q  128 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 227  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  51019414 tgcaaggtagactagcaaccgcgccgtctccaggataaaacatcccagattctaactgtacgattaaatgctgcattgccagaaatcgctcgagaataac 51019315  T
Q  228 acctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtca 327  Q
    || ||||||||           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||||    
T  51019314 acttcaatatg-----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtca 51019226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 331
Target Start/End: Original strand, 53797572 - 53797875
Alignment:
Q  16 aaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgaca 115  Q
    |||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||    
T  53797572 aaaagtgttgtttttggatttt-aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggca 53797670  T
Q  116 ctacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcg 215  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||    
T  53797671 ctacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactgctagaaatcg 53797770  T
Q  216 ctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaag 315  Q
    |||||||||||||||||||||||           ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||  ||||    
T  53797771 ctcgagaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggcacgtagaccactcaaaaaaccaaagaaggaggaagaaaag 53797859  T
Q  316 aacagttcgtcaacac 331  Q
    ||||||||||||||||    
T  53797860 aacagttcgtcaacac 53797875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 13710605 - 13710915
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||| | ||  ||||||||||| |||||| |||| ||||||||||||||| ||||||||| | | |||||||||||||||||    
T  13710605 cgtcttaaaaatgttgtttttggatttaaaaaattacgacggagcttcgaaaatattaccggggtgagtcacgaccag-tcgctttctttaagacgtttc 13710703  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  13710704 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccag 13710803  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggagga 308  Q
    |||||||||||||||||||||||| ||||           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||    
T  13710804 aaatcgctcgagaataacacctcagtatg-----------gtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagaggggagga 13710892  T
Q  309 aagaaagaacagttcgtcaacac 331  Q
    |  ||||||  ||||||||||||    
T  13710893 agaaaagaatggttcgtcaacac 13710915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 331
Target Start/End: Complemental strand, 9764167 - 9763866
Alignment:
Q  23 ttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactaccta 122  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||| ||||||||||| |  | |||||||| |||||| | |||||||||    
T  9764167 ttgtttttgtaatttgaaaattacgacggaggtttgaaactattaccagggagagtcacgaccaggtcgcctactttaagatgtttcgtggcactaccta 9764068  T
Q  123 agttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgaga 222  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9764067 agttgtgcaaggtagactaacaaccgcaccgtctctaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgaga 9763968  T
Q  223 ataacacctcaatatggttttcgaaaagtttcg-aaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagt 321  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||       || ||||||||| ||||||||||||||||||  ||||||| ||    
T  9763967 ataacacctcaatatgg-tttcgaaaagtttcgaaaaaaccactctaata-------tataccactcgagaaaccaaagaaggaggaagaaaagaacggt 9763876  T
Q  322 tcgtcaacac 331  Q
    ||||||||||    
T  9763875 tcgtcaacac 9763866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 39 - 331
Target Start/End: Complemental strand, 47046438 - 47046155
Alignment:
Q  39 aaaattacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtag 137  Q
    |||| |||||||||||||| | ||| |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  47046438 aaaaatacgacagagcttttggaacaattaccggggtgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaagttgtgcaaggtag 47046339  T
Q  138 actagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatat 237  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||||||||||||||||||| |||    
T  47046338 actagcaaccgcgccgtctccaggataaaacagctcagattcaaactgtacgat---------cactgccagaaatcgctcgagaataacacctcagtat 47046248  T
Q  238 ggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacagttcgtcaacac 331  Q
    || ||||||||||||||| |||||||||||||||||| ||| ||||||| ||| |||||||||| ||||| ||| ||||||| ||||||||||||    
T  47046247 gg-tttcgaaaagtttcg-aaaaccactctaatatggcacgcagaccacccgagaaaccaaagagggagggaagaaaagaacggttcgtcaacac 47046155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 36359228 - 36359460
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaat-tacgacagagc-tttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtt 107  Q
    |||||||||||||||||||||||||||||||||| |||||  |||| |||||||||||||||||| |||| ||||||||||| | | |||||||||||||    
T  36359228 cgtcttaaaaatgttgtttttgtaatttgaaaatatacgatggagcctttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtt 36359327  T
Q  108 tcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgcc 207  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  36359328 tcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgcc 36359427  T
Q  208 agaaatcgctcgagaataacacctcaatatggt 240  Q
    ||||||||||||||||| ||||||| |||||||    
T  36359428 agaaatcgctcgagaatgacacctcgatatggt 36359460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 21 - 308
Target Start/End: Original strand, 13695106 - 13695385
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||| | ||  ||||||||||  |||||| |||| ||||||||||||||| ||||||||||| | ||||||||||| |||||||| |||||||    
T  13695106 tgttgtttttggatttaaaaaattacgagggagcttcgaaaatattaccggggtgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacc 13695205  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattct--aactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||    
T  13695206 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcctagattctaaaactgtacgattaaaggctgcactgccagaaatcgctc 13695305  T
Q  219 gagaataacacctc-aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggagga 308  Q
    |||||||||||||| ||||||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||    
T  13695306 gagaataacacctcaaatatg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggagga 13695385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 54348290 - 54348523
Alignment:
Q  10 cgtcttaaaaatgttg-tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgt 106  Q
    |||||||||||||||| |||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | ||||||||||||    
T  54348290 cgtcttaaaaatgttgatttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgt 54348389  T
Q  107 ttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgc 206  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  54348390 ttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgc 54348489  T
Q  207 cagaaatcgctcgagaataacacctcaatatggt 240  Q
    |||||||||||||||||| ||||||| |||||||    
T  54348490 cagaaatcgctcgagaatgacacctcgatatggt 54348523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 36354121 - 36354343
Alignment:
Q  21 tgttgtttttgtaatttgaaaat-tacgacagagc-tttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||||||||||||||| ||||| |||||  |||| ||||||||||||| |||| |||| ||||||||||| | | |||||||||||||||||| |||||    
T  36354121 tgttgtttttgtaatttaaaaatatacgatggagcctttgaaactattatcgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcacta 36354220  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  36354221 cctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 36354320  T
Q  219 gagaataacacctcaatatggtt 241  Q
    |||||| ||||||| ||||||||    
T  36354321 gagaatgacacctcgatatggtt 36354343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 28 - 240
Target Start/End: Original strand, 40003979 - 40004193
Alignment:
Q  28 tttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagt 125  Q
    |||||||||||||||| |||||   |||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||| | |    
T  40003979 tttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaat 40004078  T
Q  126 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  40004079 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatg 40004178  T
Q  226 acacctcaatatggt 240  Q
    ||||||| |||||||    
T  40004179 acacctcgatatggt 40004193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 39999019 - 39999235
Alignment:
Q  26 tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa 123  Q
    |||||||||||||||||| |||||   |||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||| |    
T  39999019 tttttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga 39999118  T
Q  124 gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaa 223  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  39999119 attgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctacactgccagaaatcgctcgagaa 39999218  T
Q  224 taacacctcaatatggt 240  Q
    | ||||||| |||||||    
T  39999219 tgacacctcgatatggt 39999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 54343153 - 54343369
Alignment:
Q  26 tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa 123  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||  |    
T  54343153 tttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccga 54343252  T
Q  124 gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaa 223  Q
     |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54343253 attgtgcaaggtagactagcaaccgcgccgtctacaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaa 54343352  T
Q  224 taacacctcaatatggt 240  Q
    | ||||||| |||||||    
T  54343353 tgacacctcgatatggt 54343369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 653035 - 653146
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 165  Q
    ||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  653035 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaatttgtgcaaggtagactaacaaccacgccgtctccaggataa 653134  T
Q  166 aacagctcagat 177  Q
    |||||| |||||    
T  653135 aacagcccagat 653146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 10120914 - 10120801
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||||| || |||| ||||| ||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  10120914 attaccaggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 10120815  T
Q  164 aaaacagctcagat 177  Q
    |||| ||| |||||    
T  10120814 aaaatagcccagat 10120801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 24490022 - 24490129
Alignment:
Q  65 ttaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||||||| |||| ||||||||| | | | ||||||||||||||||||||||||   ||||| ||||||||||||||| ||||||||||  |||||||||    
T  24490022 ttaccgggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggat 24490121  T
Q  164 aaaacagc 171  Q
    ||||||||    
T  24490122 aaaacagc 24490129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 34644546 - 34644659
Alignment:
Q  63 tattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccagg 161  Q
    |||||||||| |||| ||||| || || | |||||||||||||||||||||||||| || |  ||||| |||||| |||| ||||||||||| || ||||    
T  34644546 tattaccgggttgagtcacgatcatgtcgctttctttaagacgtttcgcgacactatccgagtttgtgtaaggtaaactaacaaccgcgccgcctacagg 34644645  T
Q  162 ataaaacagctcag 175  Q
    ||||||||||||||    
T  34644646 ataaaacagctcag 34644659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 37259973 - 37259877
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | |||||||||||||||||| | |||||| | || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  37259973 tgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 37259877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 8083102 - 8083019
Alignment:
Q  95 tctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagat 177  Q
    ||||||||||||||| || ||||| | ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  8083102 tctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcctccaagataaaacagcccagat 8083019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 31269033 - 31269129
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| |||||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  31269033 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 31269129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 39319621 - 39319706
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactac-ctaagttgtgcaaggtagactagcaaccg 148  Q
    ||||||||| |||| ||||| ||||| | ||||||||||||||||| ||||||||| | |  ||||||||||||||||| ||||||    
T  39319621 attaccgggttgagtcacgatcaggtcgctttctttaagacgtttcacgacactactcgagtttgtgcaaggtagactaacaaccg 39319706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 54990732 - 54990687
Alignment:
Q  186 tacgattaaaggctgcactgccagaaatcgctcgagaataacacct 231  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||    
T  54990732 tacgattaaaggctgcactaccagaaattgctcgagaataacacct 54990687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 10318885 - 10318774
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccagga 162  Q
    ||||||||| |||| |||||||| || | | |||||||||| ||||||||   || | ||||| ||||||||||||||| ||||||||||| ||| ||||    
T  10318885 attaccgggttgagtcacgaccatgtcgctctctttaagacatttcgcgatcgtatccaagtttgtgcaaggtagactaacaaccgcgccgcctctagga 10318786  T
Q  163 taaaacagctca 174  Q
    || |||| ||||    
T  10318785 tagaacaactca 10318774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 54990686 - 54990648
Alignment:
Q  293 aaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  54990686 aaccaaagaaggaggaaagaaagaacggttcgtcaacac 54990648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 30564485 - 30564408
Alignment:
Q  99 taagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcag 175  Q
    |||||||||||||| ||||||| || || ||||||||||||||| |||  | |||| ||| |||||||||||||||||    
T  30564485 taagacgtttcgcggcactacccaaatttgtgcaaggtagactaacaattgtgccgcctcgaggataaaacagctcag 30564408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 5271515 - 5271419
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  5271515 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 5271419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 13522088 - 13521992
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  13522088 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 13521992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 31273520 - 31273616
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  31273520 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 31273616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 33463452 - 33463356
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | ||||  || ||||||||||||| ||| |  ||||| ||||| |||||||||||||||    
T  33463452 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaaggcagattgtcaaccccgccgcctccaggataaaaca 33463356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 37264660 - 37264564
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  || ||||||| |||||| ||||| ||||| |||||||||||||||    
T  37264660 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaaca 37264564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 31765906 - 31765981
Alignment:
Q  95 tctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  31765906 tctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 31765981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 17682553 - 17682503
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcag 175  Q
    ||||||||||||| ||| |||||| || | |||||||||||||||||||||    
T  17682553 ttgtgcaaggtaggctatcaaccgtgctgcctccaggataaaacagctcag 17682503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 17359550 - 17359627
Alignment:
Q  93 tttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    ||||||||||||||||| || |||||||  |||| || |||||||||||| |||| |||||  ||||||||| |||||    
T  17359550 tttctttaagacgtttcccggcactacccgagtttgttcaaggtagactaacaactgcgccacctccaggattaaaca 17359627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 51697939 - 51698012
Alignment:
Q  97 tttaagacgtttcgcgacactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||||||  |||||| | | || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  51697939 tttaagacgtttcatgacactgctcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 51698012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 17368655 - 17368976
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  17368655 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 17368754  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17368755 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 17368854  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368855 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 17368954  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  17368955 agaaagaacggttcgtcaacac 17368976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 55128736 - 55129047
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagc--tttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||| ||||||||||||||||||||||||||||  |||||||| |||| |||| |||| ||||||||||| |||||||||||||||||||||| |||||    
T  55128736 tgttgattttgtaatttgaaaattacgacagagccttttgaaacaattatcggg-tgagtcacgaccaggtcgttttctttaagacgtttcgcggcacta 55128834  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  55128835 cctaagttgtgtaaggtagactagcaaccgcgccgtctccaggataaaacagcccagatttcaactgtacgattaaaggctgcactgccagaaatcgctc 55128934  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaac 318  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  55128935 gagaataacacctcaacatggttttcgaaaagtttcgaaaaaccactctaatatggtatgtagaccactcgataaaccaaagaaggaggaaagaaagaac 55129034  T
Q  319 agttcgtcaacac 331  Q
     ||||||||||||    
T  55129035 ggttcgtcaacac 55129047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 39 - 331
Target Start/End: Original strand, 54270609 - 54270891
Alignment:
Q  39 aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtaga 138  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||||| |||||||||||||||||||||||||    
T  54270609 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctaagttgtgcaaggtaga 54270708  T
Q  139 ctagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 238  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54270709 ctagcaaccgcgccgtctccaggataaaacagttcagattcaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 54270808  T
Q  239 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacagttcgtcaacac 331  Q
    |||||           |||||||||||||||||||||  | ||||||||||| |||||||||||||||| ||| ||||||| ||||||||||||    
T  54270809 gtttt-----------gaaaaaccactctaatatggtttgcagaccactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacac 54270891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 39 - 331
Target Start/End: Complemental strand, 34129299 - 34129018
Alignment:
Q  39 aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtaga 138  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||| |||||||||| ||||||||||||||    
T  34129299 aaaattacgacagagctttgaaactattaccgggctgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtaga 34129200  T
Q  139 ctagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 238  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  34129199 ctagcaaccgcgccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcaccaccagaaatcgctcgagaataacacctcaatatg 34129100  T
Q  239 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
               ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||| ||||||||||||    
T  34129099 -----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggatgaagaaaagaacggttcgtcaacac 34129018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 3477106 - 3476794
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagcttt--gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtt 107  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||  ||||| |||||||||||||| ||||||||||| | |||||||||||||||    
T  3477106 cgtcttaaaaatgttgtttttgga-tttaaaaattacgacagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtt 3477008  T
Q  108 tcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgcc 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  3477007 tcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgcc 3476908  T
Q  208 agaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggag 306  Q
    |||||||||||||||||||||||||| ||||           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||    
T  3476907 agaaatcgctcgagaataacacctcagtatg-----------gtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagaggggag 3476819  T
Q  307 gaaagaaagaacagttcgtcaacac 331  Q
    |||  ||||||  ||||||||||||    
T  3476818 gaagaaaagaatggttcgtcaacac 3476794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 39 - 331
Target Start/End: Original strand, 17357801 - 17358084
Alignment:
Q  39 aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtg--caaggta 136  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||| |||||||||| |||||  |||||||    
T  17357801 aaaattacgacaaagctttgaaactattaccgaggtgagtcacgaccaggtcgatttctttaagacgtttcgcggcactacctaaattgtgtgcaaggta 17357900  T
Q  137 gactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaata 236  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17357901 gactagcaaccgcgccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaata 17358000  T
Q  237 tggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    ||           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||  ||||||| ||||||||||||    
T  17358001 tg-----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaagaagaaaagaacggttcgtcaacac 17358084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 39 - 331
Target Start/End: Complemental strand, 4117730 - 4117440
Alignment:
Q  39 aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtaga 138  Q
    ||||||||||| |||||| |||| |||||| |||||||| ||||||||||| | |||| ||||||| ||||||| |||||||||||||||||||||||||    
T  4117730 aaaattacgacggagcttcgaaaatattactggggtgagtcacgaccaggtcgctttcgttaagacatttcgcggcactacctaagttgtgcaaggtaga 4117631  T
Q  139 ctagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 238  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4117630 ctagcaaccgcgctgtctccaggataaaacagcccagattcaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcagtatg 4117531  T
Q  239 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacagttcgtcaacac 331  Q
    | |||||||||  |||||||||||||| ||||||||| | |||||||||||| |||||||||||||||| ||| ||||||| ||||||||||||    
T  4117530 g-tttcgaaaa--ttcgaaaaaccactgtaatatggttcatagaccactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacac 4117440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 3482572 - 3482261
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagcttt--gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||||||||| | ||| ||||||||||||||| |||  ||||| |||| ||| ||||| ||||||||||| | |||||||||||| ||||||| || ||    
T  3482572 tgttgtttttgga-tttaaaaattacgacagagttttttgaaacaattatcggagtgagtcacgaccaggtcgctttctttaagacttttcgcggcatta 3482474  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3482473 cctaatttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 3482374  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggaggaaagaaagaa 317  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| || || ||||| | ||||||||  ||||||    
T  3482373 gagaataacacctcagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgtagaccacttgagaatccaaatagaggaggaagaaaagaa 3482275  T
Q  318 cagttcgtcaacac 331  Q
    | ||||||||||||    
T  3482274 cggttcgtcaacac 3482261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 27 - 331
Target Start/End: Original strand, 10321395 - 10321689
Alignment:
Q  27 ttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt 126  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| || | || ||||||||||| | |||||||||||||||||||| |||||| ||| ||    
T  10321395 ttttggaatttgaaaattacgacagagctttgaaattattaccaggatcagtcacgaccaggtcgctttctttaagacgtttcgcggcactacttaaatt 10321494  T
Q  127 gtgcaaggtagactagcaaccgcgccgtctccaggat-aaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 225  Q
    ||||||||||||||||||||||||  |||||||| || |||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  10321495 gtgcaaggtagactagcaaccgcgttgtctccagaataaaaacagcccagattccatctgtacgattaaaggctgcactgccagaaatcgctcgagaata 10321594  T
Q  226 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgt 325  Q
    |||||||||||||           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||    
T  10321595 acacctcaatatg-----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgt 10321683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 30341993 - 30341773
Alignment:
Q  21 tgttgtttttgtaatttg-aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactac 119  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||||||   |||||||||||||||||||| ||||||    
T  30341993 tgttgtttttggaatttggaaaattacgacagagctttgaaagtattatcggggtgagtcacgaccaggtcactttctttaagacgtttcgcggcactac 30341894  T
Q  120 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 219  Q
    |||| ||||| ||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30341893 ctaaattgtgtaaggtagactagcaaccgcaccatctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgctagaaatcgctcg 30341794  T
Q  220 agaataacacctcaatatggt 240  Q
    |||||||||||||||||||||    
T  30341793 agaataacacctcaatatggt 30341773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 20090824 - 20090591
Alignment:
Q  10 cgtcttaaaaatgttgtttttg-taatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgt 106  Q
    |||||||||||||||||||||  |||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | ||||||||||||    
T  20090824 cgtcttaaaaatgttgttttttctaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgt 20090725  T
Q  107 ttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgc 206  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  20090724 ttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgc 20090625  T
Q  207 cagaaatcgctcgagaataacacctcaatatggt 240  Q
    |||||||||||||||||| ||||||| |||||||    
T  20090624 cagaaatcgctcgagaatgacacctcgatatggt 20090591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 20095945 - 20095716
Alignment:
Q  14 ttaaaaatgttgtttttg-taatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcg 110  Q
    |||||||||||||||||  |||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | ||||||||||||||||    
T  20095945 ttaaaaatgttgttttttctaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcg 20095846  T
Q  111 cgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccaga 210  Q
    || |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  20095845 cggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccaga 20095746  T
Q  211 aatcgctcgagaataacacctcaatatggt 240  Q
    |||||||||||||| ||||||| |||||||    
T  20095745 aatcgctcgagaatgacacctcgatatggt 20095716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 15763193 - 15762959
Alignment:
Q  10 cgtcttaaaaatgttgt--ttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacg 105  Q
    |||||||||||||||||  ||||||||||||||||| |||||   |||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||    
T  15763193 cgtcttaaaaatgttgtctttttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacg 15763094  T
Q  106 tttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactg 205  Q
    ||||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  15763093 tttcgcggcactacctgaactgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactg 15762994  T
Q  206 ccagaaatcgctcgagaataacacctcaatatggt 240  Q
    ||||||||||||||||||| ||||||| |||||||    
T  15762993 ccagaaatcgctcgagaattacacctcgatatggt 15762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 15768336 - 15768120
Alignment:
Q  26 tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa 123  Q
    |||||||||||||||||| |||||   |||||| ||||||||||| ||| |||| ||||||||||| | | |||||||||||||||||| |||||||| |    
T  15768336 tttttgtaatttgaaaatatacgatgaagcttttgaaactattactgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga 15768237  T
Q  124 gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaa 223  Q
      |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15768236 actgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaa 15768137  T
Q  224 taacacctcaatatggt 240  Q
    | ||||||| |||||||    
T  15768136 tgacacctcgatatggt 15768120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 17364001 - 17364172
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  17364001 cgtcttaaaaatgttgttttgg-aattt-aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 17364098  T
Q  110 gcgacactacctaagt--tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattcta 181  Q
    ||| |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17364099 gcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcta 17364172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 20810362 - 20810475
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||||||||| ||| |||||||||||||||||  |||||||  ||||||||||||||||||| ||||| |||||||||||||||    
T  20810362 attatcgggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaggat 20810461  T
Q  164 aaaacagctcagat 177  Q
    ||||||||||||||    
T  20810462 aaaacagctcagat 20810475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 33089448 - 33089335
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||  ||||||||||||||||||| ||||| ||||||||| |||||    
T  33089448 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctagttgtgcaaggtagactaacaaccacgccgtctctaggat 33089349  T
Q  164 aaaacagctcagat 177  Q
    ||||||||||||||    
T  33089348 aaaacagctcagat 33089335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 13022017 - 13022130
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||||||||| | | | ||||| |||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  13022017 attatcgggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 13022116  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  13022117 aaaacagcccagat 13022130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 53119517 - 53119623
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||| ||||| | | |||||||||||||||||| ||||||  |||||||||||||||||||| ||||| ||||||||| |||||    
T  53119517 attaccgggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactcaagttgtgcaaggtagactaacaaccacgccgtctctaggat 53119616  T
Q  164 aaaacag 170  Q
    |||||||    
T  53119617 aaaacag 53119623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 38437096 - 38436983
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||| |||||   |||||||||||||||||| | ||||| | |||||||| ||||||||||| ||||| |||||||||||||||    
T  38437096 attaccgggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatccaagttgtgaaaggtagactaacaaccacgccgtctccaggat 38436997  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  38436996 aaaacagcccagat 38436983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 26962049 - 26962162
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||| ||| |||| ||||||||| | | | |||||||||||||||| | ||||||  |||||||||||||||||||| ||| | |||||||||||||||    
T  26962049 attactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacacaagttgtgcaaggtagactaacaaacacgccgtctccaggat 26962148  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  26962149 aaaacagcacagat 26962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 21494398 - 21494296
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagct 172  Q
    |||| ||||||||||| | | ||||||||| || || ||||| |||| ||||| ||||||||||||||| |||||||||||||||| |||||||||||||    
T  21494398 tgagtcacgaccaggtcgctctctttaagatgtatcacgacagtacccaagtttgtgcaaggtagactaacaaccgcgccgtctccgggataaaacagct 21494299  T
Q  173 cag 175  Q
    |||    
T  21494298 cag 21494296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 2617363 - 2617255
Alignment:
Q  63 tattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccagg 161  Q
    |||||| ||| |||| ||| |||| || | |||||||||||||||||||| ||||||   |||| ||||||||||||||| ||||||||||| |||||||    
T  2617363 tattacagggttgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccagg 2617264  T
Q  162 ataaaacag 170  Q
    |||||||||    
T  2617263 ataaaacag 2617255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 1741178 - 1741109
Alignment:
Q  101 agacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    ||||||||||||||||||||| |||| |||||||| | | || ||||||||||| |||||||||||||||    
T  1741178 agacgtttcgcgacactacctgagtttgtgcaaggcaaattaacaaccgcgccgcctccaggataaaaca 1741109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 25024014 - 25023929
Alignment:
Q  80 acgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggata 164  Q
    |||||||  ||| |||| || ||||||||| ||||||||||| |||| ||||||||||||||| |||||| |||| ||||||||||    
T  25024014 acgaccatattgctttccttgagacgtttcacgacactacctcagtttgtgcaaggtagactaacaaccgtgccgcctccaggata 25023929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 758464 - 758368
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||| | | | |||||||||||||||| | ||||||| ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  758464 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 758368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 23666219 - 23666123
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  23666219 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23666123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 24038467 - 24038371
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  24038467 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 24038371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 39775824 - 39775728
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  39775824 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 39775728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 49971520 - 49971424
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | ||||| || || |||||||||| |||||| ||| | ||||| |||||||||||||||    
T  49971520 tgagtcacgaccaggtcgatctctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataaaaca 49971424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 8069677 - 8069772
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | ||||  | || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  8069677 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 8069772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 26706808 - 26706877
Alignment:
Q  99 taagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaa 167  Q
    |||||||||||||  ||||| | ||||| ||||||||||||||| |||| |||||| |||||||||||||    
T  26706808 taagacgtttcgcagcactatccaagtttgtgcaaggtagactaacaactgcgccgcctccaggataaaa 26706877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 3672583 - 3672679
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||  | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  3672583 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 3672679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 3692615 - 3692711
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||  | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  3692615 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 3692711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 14438791 - 14438695
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| |   |||||||||||||||| | ||||||| ||  |||||||||| |||| | ||||| ||||| |||||||||||||||    
T  14438791 tgagtcacgaccaggtcgccctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaca 14438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 18467222 - 18467318
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| ||||||  |||| ||||| |||||||||||||||    
T  18467222 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataaaaca 18467318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 20520051 - 20520147
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| |||||||||||   | |||||||||||||||| | |||| || ||| |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  20520051 tgagtcacgaccaggtcactctctttaagacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctccaagataaaaca 20520147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 795446 - 795403
Alignment:
Q  128 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 171  Q
    |||||||||||||| |||||| |||| |||||||||||||||||    
T  795446 tgcaaggtagactaacaaccgtgccgcctccaggataaaacagc 795403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 1688977 - 1688902
Alignment:
Q  79 cacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccg 153  Q
    ||||||||||| | |||||||||||||||| ||| |||||||  || |||||||||||||| || ||| |||||||    
T  1688977 cacgaccaggtcgctttctttaagacgttttgcggcactacccgagtttgtgcaaggtagattaacaatcgcgccg 1688902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 16013727 - 16013801
Alignment:
Q  95 tctttaagacgtttcgcgacactacctaag--ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 167  Q
    |||||||||||||||| ||||||| ||||   ||||||||| ||||||| | ||| ||||| |||||||||||||    
T  16013727 tctttaagacgtttcgtgacactatctaaaaattgtgcaagatagactatccaccacgccgcctccaggataaaa 16013801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 10586286 - 10586181
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 164  Q
    ||||||| |||| ||||||||||| | ||||||||||||   || || ||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  10586286 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 10586188  T
Q  165 aaacagc 171  Q
    |||||||    
T  10586187 aaacagc 10586181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 27605242 - 27605132
Alignment:
Q  63 tattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccagg 161  Q
    ||||||| || |||| |||||||| || | | |||||||||| ||||||  |||||||  |||| ||||||||||||||| ||||  | ||| ||| |||    
T  27605242 tattaccaggttgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctctagg 27605143  T
Q  162 ataaaacagct 172  Q
    |||||||||||    
T  27605142 ataaaacagct 27605132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 27708988 - 27709029
Alignment:
Q  128 tgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||||||| ||||| ||||| |||||||||||||||    
T  27708988 tgcaaggtagactatcaaccacgccgcctccaggataaaaca 27709029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 32474774 - 32474680
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||||||||| | | |||  ||||||||||| | |||| || ||  |||||||||  |||||| ||||| |||||||||||||||||||||    
T  32474774 tgagccacgaccaggtcgctctct--aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgtctccaggataaaaca 32474680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 7571314 - 7571218
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||| | ||||| |||||||||||||||    
T  7571314 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgccgcctccaggataaaaca 7571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 18472056 - 18472100
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  18472056 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 18472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 23661508 - 23661464
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  23661508 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23661464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 37404575 - 37404254
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  37404575 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 37404476  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37404475 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 37404376  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404375 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 37404276  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||| ||| ||||||||||||    
T  37404275 agaaataacggttcgtcaacac 37404254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 27716379 - 27716700
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  27716379 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 27716478  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  27716479 gcggcactacctaagttgtgcaaggtagactagcaacagcgtcgtctccaggataaaacagcccagattctaactgtacgattaaagactgcactgccag 27716578  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716579 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 27716678  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  27716679 agaaagaacggttcgtcaacac 27716700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 37409685 - 37409375
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  37409685 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 37409586  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409585 taagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 37409486  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |    
T  37409485 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacatagaccactcgataaaccaaagaaggaggaaagaaaaaacgg 37409386  T
Q  321 ttcgtcaacac 331  Q
    |||||||||||    
T  37409385 ttcgtcaacac 37409375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 11387981 - 11387666
Alignment:
Q  18 aaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacact 117  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||| | ||| |||||||||||||||| ||||    
T  11387981 aaatgttgtttttgtaatttgaaaattacaacagagctttgaaactattatcggggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcact 11387882  T
Q  118 acctaagttgtgcaaggtagactagcaaccgcgccgtctcc-------------------aggataaaacagctcagattctaactgtacgattaaaggc 198  Q
    |||||||||||||||||||||||||||||||||||||||||                   ||||||||||||| ||||||||||||||||||||||||||    
T  11387881 acctaagttgtgcaaggtagactagcaaccgcgccgtctcctagcaaccgcgccatctccaggataaaacagcccagattctaactgtacgattaaaggc 11387782  T
Q  199 tgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaa 298  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11387781 tgcactggcagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaa 11387682  T
Q  299 agaaggaggaaagaaa 314  Q
    ||||||||||||||||    
T  11387681 agaaggaggaaagaaa 11387666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 54 - 331
Target Start/End: Complemental strand, 11251228 - 11250961
Alignment:
Q  54 ctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccg 153  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11251228 ctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccg 11251129  T
Q  154 tctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagttt 253  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||            
T  11251128 tctccaggataaaacagcccagattctaactgtacgattaaagactgcactgccagtaatcgctcgagaataacacctcaatatggttttcg-------- 11251037  T
Q  254 cgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
      |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11251036 --aaaaaccactctaatatgatacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacac 11250961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 5730042 - 5730351
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  5730042 cgtcttaaaaatgttgattttggatttt-aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 5730140  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    |||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||     
T  5730141 gcggaactacctaaattgtgcaaggtagactagcaaccgcaccgtctccaggataaaacagcacagattctatctgtacgattaaaggctacactgccaa 5730240  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    |||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  5730241 aaatcgctcgagaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggtacacagaccactcgagaaaccaaagaaggaggaa 5730329  T
Q  310 agaaagaacagttcgtcaacac 331  Q
      ||||||| ||||||||||||    
T  5730330 taaaagaacggttcgtcaacac 5730351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 39 - 331
Target Start/End: Original strand, 3584566 - 3584847
Alignment:
Q  39 aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtaga 138  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||  ||||||||| ||||||||||||||    
T  3584566 aaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaaattgtgcaaggtaga 3584665  T
Q  139 ctagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 238  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  3584666 ctagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactaccataaatcgctcgacaataacacctcaatatg 3584765  T
Q  239 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
               ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  3584766 -----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 3584847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 93 - 331
Target Start/End: Original strand, 27711323 - 27711580
Alignment:
Q  93 tttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccg-------------------tctccaggataaaacagctc 173  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||                   |||||||||||||||||| |    
T  27711323 tttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctcctagcaaccgcgccatctccaggataaaacagccc 27711422  T
Q  174 agattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatg 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711423 agattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatg 27711522  T
Q  274 gtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27711523 gtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgtcaacac 27711580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 34 - 327
Target Start/End: Original strand, 5724939 - 5725221
Alignment:
Q  34 atttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaag 133  Q
    |||| ||||||||||||||||||||||| ||||| || |||||| ||||||||||| | |||||||||||||||||||| |||||||||| |||||||||    
T  5724939 attttaaaattacgacagagctttgaaattattatcgaggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaag 5725038  T
Q  134 gtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 233  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725039 gtagactagcaaccgcgccgtctccaggataaaacagcacagattctatctgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 5725138  T
Q  234 atatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtca 327  Q
    |||||           ||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||||  ||||||  ||||||||    
T  5725139 atatg-----------gtttcgaaaaaccactctaatatggtacgcaggccactcgagaaaccaaagaagaaggaagaaaagaatggttcgtca 5725221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 331
Target Start/End: Complemental strand, 48246825 - 48246532
Alignment:
Q  19 aatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||   |       ||||||||||||||||| |||||    
T  48246825 aatgttgtttttgtaatttgaaa-ttacgatagagctttgaaactattaccggggtgagtcacgacagag-------ctttaagacgtttcgcggcacta 48246734  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||    
T  48246733 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcattgccagaaatcgctc 48246634  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaac 318  Q
    ||||||||||||||||||||           ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  48246633 gagaataacacctcaatatg-----------gtttcaaaaaaccactcttatatggtacgtagaccactcggtaaaccaaagaaggaggaagaaaagaac 48246545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 36684860 - 36684644
Alignment:
Q  26 tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa 123  Q
    |||||||||||||||||| |||||   |||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||| |    
T  36684860 tttttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga 36684761  T
Q  124 gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaa 223  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36684760 attgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaa 36684661  T
Q  224 taacacctcaatatggt 240  Q
    | ||||||| |||||||    
T  36684660 tgacacctcgatatggt 36684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 34318373 - 34318160
Alignment:
Q  22 gttgtttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactac 119  Q
    |||||||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| |||||||| || | | |||||||||||||||||| ||||||    
T  34318373 gttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaagtcgctctctttaagacgtttcgcggcactac 34318274  T
Q  120 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 219  Q
    || | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||    
T  34318273 ctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccaaattcttactgtacgattaaaggctgcactgccagaaatcgctcg 34318174  T
Q  220 agaataacacctca 233  Q
    | ||| ||||||||    
T  34318173 aaaatgacacctca 34318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 39747270 - 39747157
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  39747270 attatcgggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactagcaaccacgtcgtctccaggat 39747171  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  39747170 aaaacagcccagat 39747157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 10106095 - 10106198
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 165  Q
    ||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  10106095 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 10106194  T
Q  166 aaca 169  Q
    ||||    
T  10106195 aaca 10106198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 13890805 - 13890916
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 165  Q
    ||||||| |||| ||||||||||| | | |||||||||||||| ||| ||||||| |||||||||||||||||||| ||||| | |||||||||||||||    
T  13890805 taccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactacccaagttgtgcaaggtagactaacaaccacaccgtctccaggataa 13890904  T
Q  166 aacagctcagat 177  Q
    |||||| |||||    
T  13890905 aacagcccagat 13890916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 38734265 - 38734371
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||||||||| | | |||||||||||||||||| |||||||  ||||||||||||||||||| ||||| |||||||||||||||    
T  38734265 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaggat 38734364  T
Q  164 aaaacag 170  Q
    |||||||    
T  38734365 aaaacag 38734371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 26651271 - 26651164
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| |||||||||||   | ||||||||| |||| ||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  26651271 attatcgggttgagtcacgaccaggtcactctctttaagatgttttgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 26651172  T
Q  164 aaaacagc 171  Q
    ||||||||    
T  26651171 aaaacagc 26651164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 5602530 - 5602424
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||| | | | |||||||||||||||||  |||||||  ||||||||||||||||||| ||||| ||||||||||| |||    
T  5602530 attaccgggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaagat 5602431  T
Q  164 aaaacag 170  Q
    |||||||    
T  5602430 aaaacag 5602424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 170
Target Start/End: Original strand, 14582120 - 14582195
Alignment:
Q  95 tctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 170  Q
    ||||||||| |||||||| |||||||  ||||||||||||||||||| ||||| | ||||||||||||||||||||    
T  14582120 tctttaagaagtttcgcggcactaccctagttgtgcaaggtagactaacaaccacaccgtctccaggataaaacag 14582195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 27711272 - 27711315
Alignment:
Q  19 aatgttgtttttgtaatttgaaaattacgacagagctttgaaac 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27711272 aatgttgtttttgtaatttgaaaattacgacagagctttgaaac 27711315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 25188357 - 25188266
Alignment:
Q  85 caggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcag 175  Q
    ||||||| |||||| |||| |||||||| |||||| | |||| ||||||||||||||| |||||| | |||||||| ||||||||| |||||    
T  25188357 caggttgctttcttgaagaagtttcgcggcactacttgagtttgtgcaaggtagactaacaaccgtgtcgtctccaagataaaacaactcag 25188266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 10135455 - 10135551
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||||||| || |||||||||| |||| | ||||| ||||| ||| |||||||||||    
T  10135455 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctctaggataaaaca 10135551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 33301271 - 33301180
Alignment:
Q  79 cacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    ||||||||||| ||| |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  33301271 cacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 33301180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 19422952 - 19422866
Alignment:
Q  95 tctttaagacgtttcgcgacactacctaagttgtgcaag----gtagactagcaaccgcgccgtctccaggataaaacagctcagat 177  Q
    |||||||||||||||||  ||||||| ||||||||||||    |||||||| ||||  |||| |||||||||||||| ||| |||||    
T  19422952 tctttaagacgtttcgctgcactacccaagttgtgcaaggtaggtagactaacaactacgccatctccaggataaaatagcccagat 19422866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 51041535 - 51041463
Alignment:
Q  97 tttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||||||| | |||| || || |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  51041535 tttaagacgtttcgtggcactgcccaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 51041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 19799088 - 19799013
Alignment:
Q  95 tctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||||||||| | ||||| || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  19799088 tctttaagacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 19799013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 171
Target Start/End: Complemental strand, 41098055 - 41097950
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 164  Q
    ||||||| |||| ||||||||||| | ||||||||||||   || || ||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  41098055 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 41097957  T
Q  165 aaacagc 171  Q
    |||||||    
T  41097956 aaacagc 41097950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 12259995 - 12260091
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| |||||||| || | | |||||||||||||||| |||||| || ||  |||||||||  |||||| ||||| ||||||||  |||||||||||    
T  12259995 tgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaaccacgccgtctttaggataaaaca 12260091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 23192913 - 23192817
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||| ||||| |||||| ||||| ||||  |||||||||||||||    
T  23192913 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataaaaca 23192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 3499 - 3820
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  3499 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 3598  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3599 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 3698  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3699 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacatagaccactcgataaaccaaagaaggaggaa 3798  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||| ||| ||||||||||||    
T  3799 agaaaaaacggttcgtcaacac 3820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 17509994 - 17510315
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||    
T  17509994 cgtctttaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaaccattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 17510093  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17510094 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 17510193  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510194 aaatcgctcgagaataacacctcaatatggttttcaaaaaatttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 17510293  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  17510294 agaaagaacggttcgtcaacac 17510315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 19 - 331
Target Start/End: Original strand, 17504898 - 17505210
Alignment:
Q  19 aatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  17504898 aatgttgtttttgtaatttgaaaattatgacagagctttgaaactattaccggggtgagtcacgaccaggtcgttttctttaagacgtttcgcggcacta 17504997  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  17504998 cctaagttgtgcaaggtagactagcaaccgcgtcgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatccctc 17505097  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaac 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505098 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaac 17505197  T
Q  319 agttcgtcaacac 331  Q
     ||||||||||||    
T  17505198 ggttcgtcaacac 17505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 41858530 - 41858850
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| | |||||||||||||||||    
T  41858530 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggg-tgagtcacgatcaggtcgctttctttaagacgtttc 41858628  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41858629 acggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 41858728  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  41858729 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcaaaaaaccactctaatatggtatgtagaccactcgataaaccaaagaatgaggaa 41858828  T
Q  310 agaaagaacagttcgtcaacac 331  Q
    ||||||||| ||||||||||||    
T  41858829 agaaagaacggttcgtcaacac 41858850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 42019520 - 42019830
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  42019520 tgttggttttgtattttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 42019619  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019620 taagttgtgcaaggtagactagcaaccgtgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 42019719  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |    
T  42019720 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtaaaccactcgataaaccaaagaaggaggaaagaaagaatgg 42019819  T
Q  321 ttcgtcaacac 331  Q
    |||||||||||    
T  42019820 ttcgtcaacac 42019830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 20 - 325
Target Start/End: Original strand, 41853495 - 41853799
Alignment:
Q  20 atgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactac 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||||||||    
T  41853495 atgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggg-tgagtcacgaccaggtcgctttctttaagacgtttcgcgacactac 41853593  T
Q  120 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 219  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  41853594 ctaagttgtgcaaagtagactagcaaccgcgccgtctctacgataaaacagcccagattctaactgtacgattaaaggctacactgccagaaatcgctcg 41853693  T
Q  220 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaaca 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41853694 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacg 41853793  T
Q  320 gttcgt 325  Q
    ||||||    
T  41853794 gttcgt 41853799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 36253773 - 36254082
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  36253773 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 36253872  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36253873 taagttgtgcaaggtagactagcaaccgcgccgcctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgctagaaatcgctcga 36253972  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||  ||||||| |    
T  36253973 gaataacacctcaatatgg-tttcgaaaagtttcgaaaaaccactctaatatggtacgcaaaccactcgagaaaccaaagaaggaggaagaaaagaacgg 36254071  T
Q  321 ttcgtcaacac 331  Q
    |||||||||||    
T  36254072 ttcgtcaacac 36254082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 331
Target Start/End: Complemental strand, 1414201 - 1413901
Alignment:
Q  20 atgttgtttttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||| | |||||||||||||||||||| |||||    
T  1414201 atgttgtttttgtaatttgaaaaattacgacaaagctttgaaactattactggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcacta 1414102  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1414101 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaacaactcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 1414002  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaac 318  Q
    ||||||||||||||||||||           ||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||  |||||||    
T  1414001 gagaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggta-gcagaccactcgagaaaccaaagaaggaggaagaaaagaac 1413914  T
Q  319 agttcgtcaacac 331  Q
     ||||||||||||    
T  1413913 ggttcgtcaacac 1413901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 27 - 331
Target Start/End: Original strand, 26709055 - 26709349
Alignment:
Q  27 ttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt 126  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||| ||    
T  26709055 ttttggaatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaatt 26709154  T
Q  127 gtg--caaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaat 224  Q
    |||  ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  26709155 gtgtgcaaggtagactagcaaccgcgtcatctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagtaatcgctcgagaat 26709254  T
Q  225 aacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcg 324  Q
    ||||||||||||||           ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  ||||||  ||||     
T  26709255 aacacctcaatatg-----------gtttcgaaaaaccactctaatatggtac-cagaccactcgagaaaccaaagaaggaggaagaaaagaatggttca 26709342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 27 - 331
Target Start/End: Original strand, 26978789 - 26979083
Alignment:
Q  27 ttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt 126  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||| ||    
T  26978789 ttttggaatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaatt 26978888  T
Q  127 gtg--caaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaat 224  Q
    |||  ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  26978889 gtgtgcaaggtagactagcaaccgcgtcatctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagtaatcgctcgagaat 26978988  T
Q  225 aacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcg 324  Q
    ||||||||||||||           ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||  ||||||  ||||     
T  26978989 aacacctcaatatg-----------gtttcgaaaaaccactctaatatggtac-cagaccactcgagaaaccaaagaaggaggaagaaaagaatggttca 26979076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 43579737 - 43579917
Alignment:
Q  151 ccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaag 250  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43579737 ccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatagttttcgaaaag 43579836  T
Q  251 tttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  43579837 tttcgaaaaaccactctaatatggtacgtagaccactcaataaaccaaagaaggaggaaagaaagaacggttcgtcaacac 43579917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 24771516 - 24771203
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgttt 108  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||| |||| |||||||||| |||| ||||||||||| | ||||||||||| ||||    
T  24771516 cgtcttaaaaatgttgtttt-gtagtttgaaaaattacgacagagcttcgaaaatattaccgggatgagtcacgaccaggtcgctttctttaagatgttt 24771418  T
Q  109 cgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattct--aactgtacgattaaaggctgcactgc 206  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||| ||||||    
T  24771417 cgcggcactacctaagttgtgcaaggtagactaacaaccgcgccgtctccaggataaaacaacccagattctaaaactgtacgattaaaggctacactgc 24771318  T
Q  207 cagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggag 306  Q
     ||||||||||||||||||||||||||| ||         |  ||||||||||||||||| |||| |||| | ||| | ||||| |||||||||||||||    
T  24771317 tagaaatcgctcgagaataacacctcaa-at---------acggtttcgaaaaaccactcaaatacggtatgcagatcgctcgagaaaccaaagaaggag 24771228  T
Q  307 gaaagaaagaacagttcgtcaacac 331  Q
    ||   ||||||| ||||||||||||    
T  24771227 gaggaaaagaacggttcgtcaacac 24771203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 331
Target Start/End: Complemental strand, 24776958 - 24776658
Alignment:
Q  27 ttttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagt 125  Q
    ||||||| |||||||| |||||||||||||| |||| |||||| |||||||| |||||||| || | |||||||||||||||||||| ||||||||||||    
T  24776958 ttttgtagtttgaaaaattacgacagagcttcgaaaatattactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaagt 24776859  T
Q  126 tgtgcaaggtagactagcaacc---gcgccgtctccaggataaaacagctcagattct--aactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  24776858 tgtgcaaggtagactagcaaccgcggcgccgtctccaggataaaacagcccagattctaaaactgtacgattaaaggattcactgccagaaatcgctcga 24776759  T
Q  221 gaataacacctc-aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaaca 319  Q
    |||||||||||| ||||||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||   |||||||     
T  24776758 gaataacacctcaaatatg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggaggaggaaaagaacg 24776670  T
Q  320 gttcgtcaacac 331  Q
    ||||||||||||    
T  24776669 gttcgtcaacac 24776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 13582793 - 13582682
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 165  Q
    ||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  13582793 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaatttgtgcaaggtagactaacaaccacgccgtctccaggataa 13582694  T
Q  166 aacagctcagat 177  Q
    |||||| |||||    
T  13582693 aacagcccagat 13582682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 14374127 - 14374238
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 165  Q
    ||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  14374127 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcagggtagactaacaaccacgccgtctccaggataa 14374226  T
Q  166 aacagctcagat 177  Q
    |||||| |||||    
T  14374227 aacagcccagat 14374238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 24435972 - 24435861
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 165  Q
    ||||||| |||| ||||||||||| | | |||||||||||||||||| ||||| | |||||||||||||||||||| ||||| |||||||||||||||||    
T  24435972 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaagttgtgcaaggtagactatcaaccacgccgtctccaggataa 24435873  T
Q  166 aacagctcagat 177  Q
    |||||| |||||    
T  24435872 aacagcccagat 24435861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 7805066 - 7805174
Alignment:
Q  69 cggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaac 168  Q
    |||| |||| |||||||||||   | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  7805066 cgggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 7805165  T
Q  169 agctcagat 177  Q
    ||| |||||    
T  7805166 agcccagat 7805174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 28857850 - 28857958
Alignment:
Q  63 tattaccggggtgagccacgaccaggttgttttcttt-aagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccag 160  Q
    |||||||||| |||| |||||||| || | ||||||| ||||||||||||| |||||||| |||| ||||||||||||| | ||||| ||||| || |||    
T  28857850 tattaccgggttgagtcacgaccaagtcgctttcttttaagacgtttcgcggcactacctgagtttgtgcaaggtagaccaacaaccacgccgcctacag 28857949  T
Q  161 gataaaaca 169  Q
    |||||||||    
T  28857950 gataaaaca 28857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 37248891 - 37248795
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||| ||||| | ||||||||||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  37248891 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 37248795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 31986708 - 31986822
Alignment:
Q  56 ttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgt 154  Q
    |||||| ||||| |||| |||| |||||  |||| | ||||||||||||||||||||||||||||  || || ||||||||||| || |||  ||||||     
T  31986708 ttgaaaatattatcgggttgagtcacgataaggtcgctttctttaagacgtttcgcgacactacccgagtttatgcaaggtagattaacaattgcgccgc 31986807  T
Q  155 ctccaggataaaaca 169  Q
    || ||||||||||||    
T  31986808 cttcaggataaaaca 31986822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 26667271 - 26667367
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  26667271 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26667367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 26938868 - 26938964
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  26938868 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26938964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 29168069 - 29167973
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  29168069 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 29167973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 12103030 - 12103120
Alignment:
Q  80 acgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  12103030 acgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 12103120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 36423643 - 36423732
Alignment:
Q  81 cgaccaggttgttttctttaagacgtttcgcgacact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    ||||||||| | | |||||||||||||||||| ||||  || || |||||||||| |||||| ||||| ||||| |||||| ||||||||    
T  36423643 cgaccaggtcgctctctttaagacgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaaca 36423732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 556694 - 556790
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||| | | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  556694 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 556790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 561466 - 561562
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||| | | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  561466 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 561562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 7451757 - 7451853
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||| | |||||||||||||||    
T  7451757 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataaaaca 7451853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 36428708 - 36428804
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||| |||  ||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  36428708 tgagtcacgaccaggtcgctctctttaagacgttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36428804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 36937607 - 36937511
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||  | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  36937607 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36937511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 36942361 - 36942265
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||  | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  36942361 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36942265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 41996664 - 41996760
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||||| | |||||||||||||||| | ||||  || || ||||| |||  |||||| ||||| ||||| |||||||||||||||    
T  41996664 tgagtcacgaccaggttgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaaca 41996760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 331
Target Start/End: Original strand, 42024566 - 42024610
Alignment:
Q  287 tcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    |||| |||||||||||||||||||||||||||  |||||||||||    
T  42024566 tcgaaaaaccaaagaaggaggaaagaaagaacgattcgtcaacac 42024610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 10759864 - 10759820
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  10759864 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 10759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 32461645 - 32461549
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||| | | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  32461645 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 32461549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 35679919 - 35679875
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  35679919 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 35679875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 37652926 - 37652830
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||| ||||| | | |||||||||||||||| |||| |  || || |||||||||| |||||| ||||| ||||  |||||||||||||||    
T  37652926 tgagtcacgatcaggtcgctctctttaagacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaaca 37652830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 42001433 - 42001529
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  ||||| |||  |||||| ||||| ||||| |||||||||||||||    
T  42001433 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaaca 42001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 279; Significance: 1e-156; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 29491396 - 29491074
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | |||||||||||||||||    
T  29491396 cgtcttaaaaatgttgtttgtgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaagtcgctttctttaagacgtttc 29491297  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29491296 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 29491197  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcga-aaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggagga 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29491196 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggagga 29491097  T
Q  309 aagaaagaacagttcgtcaacac 331  Q
    || ||||||| ||||||||||||    
T  29491096 aaaaaagaacggttcgtcaacac 29491074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 26 - 331
Target Start/End: Original strand, 21396651 - 21396956
Alignment:
Q  26 tttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagt 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||    
T  21396651 tttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagt 21396750  T
Q  126 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21396751 tgtgcaaggtagactagcaaccgcgccatctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 21396850  T
Q  226 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgt 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21396851 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacggttcgt 21396950  T
Q  326 caacac 331  Q
    ||||||    
T  21396951 caacac 21396956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 22703514 - 22703204
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | || |||||||||||||||||||||| |||||||    
T  22703514 tgttgtatttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgattatgtcgttttctttaagacgtttcgcggcactacc 22703415  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||    
T  22703414 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgtcagaaatcactcga 22703315  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  22703314 gaataacacctcaatatggttttcgaaaagtttcaaaaaaccactctaatatggtacgtagaccactcaataaaccaaagaaggaggaaagaaagaacgg 22703215  T
Q  321 ttcgtcaacac 331  Q
    |||||||||||    
T  22703214 ttcgtcaacac 22703204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 21401690 - 21401998
Alignment:
Q  10 cgtcttaaaaatgttg-tttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgttt 108  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||    
T  21401690 cgtcttaaatatgttgatttttgtaatttgaaaattacgatagagctttgaaactattaccgggatgagtcacgaccaggtcgctttctttaagacgttt 21401789  T
Q  109 cgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgcca 208  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||    
T  21401790 cgcggcactacctaagttgtggaaggtagactagcaaccgcgccgtctccaggat--------------tctaactgtacgattaaaggctgcactgcca 21401875  T
Q  209 gaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggagga 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21401876 gaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggagga 21401975  T
Q  309 aagaaagaacagttcgtcaacac 331  Q
    |||||||||| ||||||||||||    
T  21401976 aagaaagaacggttcgtcaacac 21401998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 331
Target Start/End: Complemental strand, 24191532 - 24191221
Alignment:
Q  20 atgttgtttttgtaatttgaaaattacgacagagctt-tgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||    
T  24191532 atgttgtttttgtaatttgaaa-ttacgacagagcttatgaagctattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 24191434  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||    
T  24191433 cctgagttgtgcaaggtagactagtaaccgcgccgtctccaggataaaacagcccagattctaactgtaagattaaaggctgcactgccagaaatctctc 24191334  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaa 317  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||| ||    
T  24191333 gagaataacacctcagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagagggaggaaagaaaaaaa 24191235  T
Q  318 cagttcgtcaacac 331  Q
    | ||||||||||||    
T  24191234 cggttcgtcaacac 24191221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 331
Target Start/End: Complemental strand, 24192629 - 24192318
Alignment:
Q  20 atgttgtttttgtaatttgaaaattacgacagagctt-tgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    |||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||    
T  24192629 atgttgtttttgaaatttgaaa-ttacgacagagcttatgaagctattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 24192531  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||    
T  24192530 cctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaagattaaaggctgcactgccagaaatctctc 24192431  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaa 317  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||| ||    
T  24192430 gagaataacacctcagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagagggaggaaagaaaaaaa 24192332  T
Q  318 cagttcgtcaacac 331  Q
    | ||||||||||||    
T  24192331 cggttcgtcaacac 24192318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 26 - 331
Target Start/End: Original strand, 34375871 - 34376175
Alignment:
Q  26 tttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagt 125  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||| ||||| | |||||||||||||||||||| ||||||||||||    
T  34375871 tttttgtaatttgaaaattacgacggagttttgaaactattatcggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactacctaagt 34375970  T
Q  126 tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaata 225  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34375971 tgtgcaacgtagattagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaata 34376070  T
Q  226 acacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgt 325  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||||  ||||||| ||||||    
T  34376071 acacctcagtatgg-tttcgaaaagtttcgaaaaaccactctaatatggcacgcagaccactcgagaaaccaaagagggaggaagaaaagaacggttcgt 34376169  T
Q  326 caacac 331  Q
    ||||||    
T  34376170 caacac 34376175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 39 - 331
Target Start/End: Complemental strand, 2818277 - 2817996
Alignment:
Q  39 aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtaga 138  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||| | |||||||||||||||| |||  ||||||||||||||||||||||||    
T  2818277 aaaattacgacagagctttgaaactattaccgaggtgaatcacgaccaggtcgctttctttaagacgttttgcgttactacctaagttgtgcaaggtaga 2818178  T
Q  139 ctagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 238  Q
    |||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2818177 ctagaaaccgcgccgtctccaggataaaacagctcagattctttctgtacgattaaaggttgcactgccagaaatcgctcgagaataacacctcaatatg 2818078  T
Q  239 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
               ||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||  ||||||| ||||||||||||    
T  2818077 -----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaacaaggaggaagaaaagaacggttcgtcaacac 2817996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 39 - 331
Target Start/End: Original strand, 34142041 - 34142335
Alignment:
Q  39 aaaattacgacagagcttt----gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaagg 134  Q
    ||||||||||||||||| |    |||||| ||||||||||||| ||||||||||| | |||||||||||||||||| | | ||||| |||||||||||||    
T  34142041 aaaattacgacagagctatatatgaaactgttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaagttgtgcaagg 34142140  T
Q  135 tagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaa 234  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  34142141 tagactagcaaccgcgccgtctccaggataaaacagcccagattcaaactgtacgattaaaggctgcactgctagaaatcgctcgagaataacacctcag 34142240  T
Q  235 tatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacagttcgtcaacac 331  Q
    ||||| |||||||||  |||||||||||||||||||||||| || |||| |||||| |||||||||||||||| ||| ||||||| ||||||||||||    
T  34142241 tatgg-tttcgaaaa--ttcgaaaaaccactctaatatggttcgcagacaactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacac 34142335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 39 - 331
Target Start/End: Original strand, 34154657 - 34154951
Alignment:
Q  39 aaaattacgacagagcttt----gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaagg 134  Q
    ||||||||||||||||| |    |||||| ||||||||||||| ||||||||||| | |||||||||||||||||| | | ||||| |||||||||||||    
T  34154657 aaaattacgacagagctatatatgaaactgttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaagttgtgcaagg 34154756  T
Q  135 tagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaa 234  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  34154757 tagactagcaaccgcgccgtctccaggataaaacagcccagattcaaactgtacgattaaaggctgcactgctagaaatcgctcgagaataacacctcag 34154856  T
Q  235 tatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaag-aaagaacagttcgtcaacac 331  Q
    ||||| |||||||||  |||||||||||||||||||||||| || |||| |||||| |||||||||||||||| ||| ||||||| ||||||||||||    
T  34154857 tatgg-tttcgaaaa--ttcgaaaaaccactctaatatggttcgcagacaactcgagaaaccaaagaaggagggaagaaaagaacggttcgtcaacac 34154951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 331
Target Start/End: Original strand, 31981506 - 31981809
Alignment:
Q  17 aaaatgttgtttttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgaca 115  Q
    ||||||||||||| ||| |||||||| |||||||||||||| ||||   ||||||||||||| ||||||||||| | |||||||||||||||||||| ||    
T  31981506 aaaatgttgtttt-gtagtttgaaaaattacgacagagcttcgaaa---ttaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggca 31981601  T
Q  116 ctacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattct--aactgtacgattaaaggctgcactgccagaaat 213  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||    
T  31981602 ctacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacaggccagattctaaaactgtacgattaaaggctgcactgccagaaat 31981701  T
Q  214 cgctcgagaataacacctc-aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaaga 312  Q
    ||||||||||||||||||| ||||||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||   |    
T  31981702 cgctcgagaataacacctcaaatatg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggaggaggaa 31981790  T
Q  313 aagaacagttcgtcaacac 331  Q
    |||||| ||||||||||||    
T  31981791 aagaacggttcgtcaacac 31981809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 22698405 - 22698172
Alignment:
Q  10 cgtcttaaaaatgttgttttt-gtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgt 106  Q
    ||||||||||||||| ||||| ||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | ||||||||||||    
T  22698405 cgtcttaaaaatgtttttttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgt 22698306  T
Q  107 ttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgc 206  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  22698305 ttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgc 22698206  T
Q  207 cagaaatcgctcgagaataacacctcaatatggt 240  Q
    |||||||||||||||||| ||||||| |||||||    
T  22698205 cagaaatcgctcgagaatgacacctcgatatggt 22698172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 13605197 - 13605090
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| |||||| |||||| | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  13605197 attaccgggttgagtcacgactaggttgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 13605098  T
Q  164 aaaacagc 171  Q
    ||||||||    
T  13605097 aaaacagc 13605090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 177 - 301
Target Start/End: Complemental strand, 6728398 - 6728285
Alignment:
Q  177 ttctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggta 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||           |||||||||||||| |||||||||| |    
T  6728398 ttctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcagtatg-----------gtttcgaaaaaccagtctaatatggca 6728310  T
Q  277 cgtagaccactcgataaaccaaaga 301  Q
    |||||||||||||| ||||||||||    
T  6728309 cgtagaccactcgagaaaccaaaga 6728285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 19478138 - 19478251
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||| |||    
T  19478138 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccacgat 19478237  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  19478238 aaaacagcccagat 19478251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 5601068 - 5600971
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 170  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||  || ||||| |||||||| || ||||||||||| ||||| ||||||||||    
T  5601068 tgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctccaagataaaacag 5600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 12183096 - 12182995
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagct 172  Q
    |||| ||||||||||| | | |||||||||||||||||| ||||||| ||||| |||||| |||||||| |||||||| || |||||| |||||||||||    
T  12183096 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataaaacagct 12182997  T
Q  173 ca 174  Q
    ||    
T  12182996 ca 12182995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 3901902 - 3902006
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccagga 162  Q
    ||||||||| |||| ||||||||||| | | |||||||||||||| ||| ||||| | ||||| |||||||||||| || ||||||||||| ||||||||    
T  3901902 attaccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccagga 3902001  T
Q  163 taaaa 167  Q
    |||||    
T  3902002 taaaa 3902006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 10642698 - 10642805
Alignment:
Q  63 tattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccagg 161  Q
    |||||||||| |||| |||||| | || | |||||||||||||||||| | ||||| || | |||||||||||||||||| ||||||||||| |||| ||    
T  10642698 tattaccgggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcccgg 10642797  T
Q  162 ataaaaca 169  Q
    ||||||||    
T  10642798 ataaaaca 10642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 31476120 - 31476007
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||| ||||||| |  |||||||| |||| ||| |||||  |||||| ||||||||  |||| ||||| |||||||||||||||    
T  31476120 attatcgggttgagtcacgatcaggttgctcactttaagatgtttggcggcactatttaagttatgcaaggtcaactaacaaccacgccgtctccaggat 31476021  T
Q  164 aaaacagctcagat 177  Q
    ||||||||||||||    
T  31476020 aaaacagctcagat 31476007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 6728472 - 6728397
Alignment:
Q  34 atttgaaaattacgacagagcttt--gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtt 107  Q
    |||| |||||||||| ||||||||  ||||| |||||||||||||| ||||||||||| | |||||||||||||||    
T  6728472 atttaaaaattacgatagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtt 6728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 5740865 - 5740784
Alignment:
Q  95 tctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcag 175  Q
    ||||||||||||||| |||||||||  ||||| ||||||||| ||||| ||||||||||| | | ||||||||| |||||||    
T  5740865 tctttaagacgtttcacgacactactcaagtttgtgcaaggtggactatcaaccgcgccgccactaggataaaatagctcag 5740784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 31495946 - 31495833
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||| ||||||| |  |||||| | |||| ||| |||||| ||| || ||||| ||| |||| ||||| |||||||||||||||    
T  31495946 attatcgggttgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggat 31495847  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  31495846 aaaacagcccagat 31495833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 31501332 - 31501219
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||| ||||||| |  |||||| | |||| ||| |||||| ||| || ||||| ||| |||| ||||| |||||||||||||||    
T  31501332 attatcgggttgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggat 31501233  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  31501232 aaaacagcccagat 31501219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 17964635 - 17964559
Alignment:
Q  94 ttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    ||||||||||||||||| | ||||| || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  17964635 ttctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 17964559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Complemental strand, 24589239 - 24589164
Alignment:
Q  95 tctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    ||||||| |||||||| ||||||  || || ||||||||| ||||||| ||||| |||||||||||||||||||||    
T  24589239 tctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccacgccgtctccaggataaaaca 24589164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 6113068 - 6112967
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagct 172  Q
    |||| ||||| ||||||| |||||||||||||  || ||||| ||||| || |||||||||||||||||  ||||| | || |||||||||||||||| |    
T  6113068 tgagtcacgatcaggttgctttctttaagacgaatcacgacattacctgaaattgtgcaaggtagactaataaccgtg-cgcctccaggataaaacagtt 6112970  T
Q  173 cag 175  Q
    |||    
T  6112969 cag 6112967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 29325525 - 29325639
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagga 162  Q
    ||||||||| |||| ||||| || || | | | ||||||||||||  |||||||||||||| ||||||||||||||||| |||| | | || ||||| ||    
T  29325525 attaccgggttgagtcacgatcaagtcgctctttttaagacgttttacgacactacctaagtttgtgcaaggtagactaacaactgtgacgcctccaaga 29325624  T
Q  163 taaaacagctcagat 177  Q
    ||||| ||| |||||    
T  29325625 taaaatagcccagat 29325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 31515826 - 31515729
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 171  Q
    |||| ||||| ||||||| |  |||||| | |||| ||| |||||| ||| || ||||| ||| |||| ||||| |||||||||||||||||||||||    
T  31515826 tgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggataaaacagc 31515729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 12689022 - 12689066
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||    
T  12689022 ttgtgcaaggcagactatcaaccacgccgtctccaggataaaaca 12689066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 17281669 - 17281561
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccagga 162  Q
    ||||||||| |||| ||||| || || | |||||||||||||||||||| ||||| ||  | ||||| ||||||||||| |||||||  || ||  ||||    
T  17281669 attaccgggttgagtcacgagcatgtcgctttctttaagacgtttcgcggcactacccgtatttgtgtaaggtagactaacaaccgcatcgcctttagga 17281570  T
Q  163 taaaacagc 171  Q
    |||||||||    
T  17281569 taaaacagc 17281561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 13660040 - 13660105
Alignment:
Q  85 caggttgttttctttaagacgtttcgcgacactacctaa-gttgtgcaaggtagactagcaaccgc 149  Q
    ||||||| | ||||||||||||||| ||||| |||||||  |||||||||||| |||| |||||||    
T  13660040 caggttgctatctttaagacgtttcacgacattacctaattttgtgcaaggtaaactaacaaccgc 13660105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 11570845 - 11570749
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||| ||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||| | ||||| ||||| |||||||||||||||    
T  11570845 tgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaca 11570749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 11614136 - 11614092
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  11614136 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 11614092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 267; Significance: 1e-149; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 40518631 - 40518310
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  40518631 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 40518532  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  40518531 gcggcactacctaaatagtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccaa 40518432  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaacc-aaagaaggagga 308  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  40518431 aaatcgctcgagaataacacctcaatatggttttcaaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaagaaggagg- 40518333  T
Q  309 aagaaagaacagttcgtcaacac 331  Q
    |||||||||| ||||||||||||    
T  40518332 aagaaagaacggttcgtcaacac 40518310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 40392266 - 40392576
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||| |||||||    
T  40392266 tgttgtttttgtaatttgaaaattacgatagaattttgaaactattatcggggtgagtcacgaccagactgttttctttaagacgtttcgcggcactacc 40392365  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  40392366 taagttgtgcaaggtagactagcaaccacgccgtctccaggataaaacagcccaaattctaactgtacgattaaaggctgcactgccagaaatcgctcga 40392465  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40392466 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacgg 40392565  T
Q  321 ttcgtcaacac 331  Q
    |||||||||||    
T  40392566 ttcgtcaacac 40392576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 28751877 - 28751578
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||||||||| |||||||    
T  28751877 tgttgtttttgtaatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttcttttagacgtttcgcggcactacc 28751778  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751777 taagttgtgcaaggtagacaagcaaccgcaccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 28751678  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    |||||||||||||||||||||||           |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| |    
T  28751677 gaataacacctcaatatggtttt-----------gaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacgg 28751589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 42723613 - 42723380
Alignment:
Q  10 cgtcttaaaaatgttg-tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgt 106  Q
    |||||||||||||||| |||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | ||||||||||||    
T  42723613 cgtcttaaaaatgttgatttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgt 42723514  T
Q  107 ttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgc 206  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  42723513 ttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgc 42723414  T
Q  207 cagaaatcgctcgagaataacacctcaatatggt 240  Q
    |||||||||||||||||| ||||||| |||||||    
T  42723413 cagaaatcgctcgagaatgacacctcgatatggt 42723380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 44754759 - 44754525
Alignment:
Q  10 cgtcttaaaaatgttg--tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacg 105  Q
    ||||||||||||||||  |||||||||||||||||| |||||   |||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||    
T  44754759 cgtcttaaaaatgttgactttttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacg 44754660  T
Q  106 tttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactg 205  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  44754659 tttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactg 44754560  T
Q  206 ccagaaatcgctcgagaataacacctcaatatggt 240  Q
    ||||||||||||||||||| ||||||| |||||||    
T  44754559 ccagaaatcgctcgagaatgacacctcgatatggt 44754525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 44096247 - 44096468
Alignment:
Q  21 tgttgtttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||||||||||||||| ||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||    
T  44096247 tgttgtttttgtaatttaaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcacta 44096346  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  44096347 cctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctc 44096446  T
Q  219 gagaataacacctcaatatggt 240  Q
    |||||| ||||||| |||||||    
T  44096447 gagaatgacacctcgatatggt 44096468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 42728765 - 42728549
Alignment:
Q  26 tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa 123  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||| |    
T  42728765 tttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga 42728666  T
Q  124 gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaa 223  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42728665 attgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaa 42728566  T
Q  224 taacacctcaatatggt 240  Q
    | ||||||| |||||||    
T  42728565 tgacacctcgatatggt 42728549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 44759907 - 44759691
Alignment:
Q  26 tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa 123  Q
    |||||||||||||||||| |||||   |||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||| |    
T  44759907 tttttgtaatttgaaaatatacgatgaagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga 44759808  T
Q  124 gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaa 223  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44759807 attgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaa 44759708  T
Q  224 taacacctcaatatggt 240  Q
    | ||||||| |||||||    
T  44759707 tgacacctcgatatggt 44759691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 171
Target Start/End: Original strand, 42914632 - 42914739
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  42914632 attagcgggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcactacctaagttgtgcaaggtagactaacaaccacgccgtctccaggat 42914731  T
Q  164 aaaacagc 171  Q
    ||||||||    
T  42914732 aaaacagc 42914739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 250 - 331
Target Start/End: Complemental strand, 4163507 - 4163426
Alignment:
Q  250 gtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  4163507 gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 4163426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 5089286 - 5089375
Alignment:
Q  82 gaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 171  Q
    |||||||| | | |||||||||||||||||| ||||| | |||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  5089286 gaccaggtcgctctctttaagacgtttcgcggcactatccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagc 5089375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 4163575 - 4163525
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggg 72  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4163575 tgttgtttttg-aatttgaaaattacgacagagctttgaaactattaccggg 4163525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 9189899 - 9189803
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||||| | |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  9189899 tgagtcacgaccaggttgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9189803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 30658262 - 30658358
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||||| | || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  30658262 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 30658358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 9180820 - 9180724
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  9180820 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9180724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 10160820 - 10160724
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  10160820 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 10160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 28945191 - 28945269
Alignment:
Q  97 tttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctca 174  Q
    |||||||||||||||| ||||||   |||| |||||||||| |||| ||||||||  | ||||||||||||||||||||    
T  28945191 tttaagacgtttcgcggcactacacgagtttgtgcaaggtatactaacaaccgcgttgcctccaggataaaacagctca 28945269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 160040 - 160137
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 170  Q
    |||| ||||||||||| | | ||||||| ||||||| |||||||| || || ||||||||||||| ||| |||||||| || ||||  ||||||||||    
T  160040 tgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctccgagataaaacag 160137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 1935089 - 1934993
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  1935089 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 1934993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 18344430 - 18344526
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| ||||||  |||| ||||| |||||||||||||||    
T  18344430 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataaaaca 18344526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 25478393 - 25478297
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||| ||||||| | | |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||| ||||||||    
T  25478393 tgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaaca 25478297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 25497421 - 25497325
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | ||||||||||||||||  ||||| || || || |||||||  |||||| ||||| ||||| |||||||||||||||    
T  25497421 tgagtcacgaccaggtcgctctctttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccaggataaaaca 25497325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 11658965 - 11658887
Alignment:
Q  93 tttctttaagacgtttcgcgacactac-ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 170  Q
    |||||||||||| |||| || |||||| | || ||||||||||||||||| |||| || ||| ||||| ||||||||||    
T  11658965 tttctttaagacatttcacggcactactcgaatttgtgcaaggtagactaacaactgcaccgcctccatgataaaacag 11658887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 19538377 - 19538458
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaac 146  Q
    ||||||| |||| ||||||||||| | |||||||||||| |||| || ||||| || |  ||||||||||||||||| ||||    
T  19538377 taccgggttgagtcacgaccaggtcgctttctttaagacatttcacggcactatccgagtttgtgcaaggtagactaacaac 19538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 6297989 - 6297886
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 164  Q
    ||||||| |||| ||||||||||| | ||||||||||||   || || ||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  6297989 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 6297891  T
Q  165 aaaca 169  Q
    |||||    
T  6297890 aaaca 6297886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 30650928 - 30651024
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||| | | | |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  30650928 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 30651024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 42926803 - 42926763
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataa 165  Q
    ||||||||||||||||| ||||| ||||| |||||||||||    
T  42926803 ttgtgcaaggtagactatcaaccacgccgcctccaggataa 42926763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 9367 - 9057
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  9367 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 9268  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9267 gcggcactacctaagttgtgcaaggaagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 9168  T
Q  210 aaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    |||| ||||||||||||||||||||||||           ||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||||    
T  9167 aaattgctcgagaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggtacgcaaaccactcgagaaaccaaacaaggaggaa 9079  T
Q  310 agaaagaacagttcgtcaacac 331  Q
      ||||||||||||||||||||    
T  9078 gaaaagaacagttcgtcaacac 9057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 12 - 331
Target Start/End: Complemental strand, 21644239 - 21643930
Alignment:
Q  12 tcttaaaaatgttg-tttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcg 110  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| | ||||||||||||||||||    
T  21644239 tcttaaaaatgttgatttttgtaatttgaaaattacgacagagctttgaaagtattaccggggtgaatcacgaccaggtcgctttctttaagacgtttcg 21644140  T
Q  111 cgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccaga 210  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  21644139 cggcactacctaagttgtgcaaggtagactagcaaccgcgccgactccaggataaaacagcccagattctaactgtacgattaaaggctgcactgctaga 21644040  T
Q  211 aatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaa 310  Q
    ||||||||||||||||||||||||||||           |||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  21644039 aatcgctcgagaataacacctcaatatg-----------gtttcgaaaagccactataatatggtacgcagaccactcgagaaaccaaagaaggaggaaa 21643951  T
Q  311 gaaagaacagttcgtcaacac 331  Q
     ||||||| |||| |||||||    
T  21643950 aaaagaacggttcatcaacac 21643930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 17955938 - 17955638
Alignment:
Q  21 tgttgtttttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactac 119  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||| ||||||    
T  17955938 tgttgtttttggtatttgaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactac 17955839  T
Q  120 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17955838 ctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 17955739  T
Q  220 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaaca 319  Q
    |||||||||||||||||||           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||     
T  17955738 agaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacg 17955650  T
Q  320 gttcgtcaacac 331  Q
     |||||||||||    
T  17955649 attcgtcaacac 17955638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 24884660 - 24884959
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||| |||||||    
T  24884660 tgttgtttttgtaatttgaaa-ttacggcagagctttgaaactattaccggggtgagtcacgaccaggtagctttctttaagacgttttgcggcactacc 24884758  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggat-aaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 219  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| |  |||||||||||||||||||||||||||||||||||||    
T  24884759 taagttgtgcaaggtagactagcaaccacgccgtctccaggataaaaacagcccagattatttctgtacgattaaaggctgcactgccagaaatcgctcg 24884858  T
Q  220 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaaca 319  Q
    |||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||     
T  24884859 agaataacacctcaatatg-----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaggaagaaaagaacg 24884947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 27 - 309
Target Start/End: Complemental strand, 42514516 - 42514245
Alignment:
Q  27 ttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagtt 126  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||| | |||||||||||||||||||| |||||||||||||    
T  42514516 ttttgtaatttgaaaattacgacagagctttaaaactattaccggggtgagtcatgaccaggtcgctttctttaagacgtttcgcggcactacctaagtt 42514417  T
Q  127 gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataa 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42514416 gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccaggttcaaactgtacgattaaaggctgcactgccagaaatcgctcgagaataa 42514317  T
Q  227 cacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaa 309  Q
    ||||||||||||           ||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||    
T  42514316 cacctcaatatg-----------gtttcgaaaaaccactctaatatagtacgcagaccactcgagaaaacaaagaaggaggaa 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 39 - 331
Target Start/End: Complemental strand, 43999360 - 43999079
Alignment:
Q  39 aaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtaga 138  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||| ||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  43999360 aaaattacgacagagctttgaaactattactgggttgagtcacgatcaggtcgttttctttaaaacgtttcgcggcactacctaaattgtgcaaggtaga 43999261  T
Q  139 ctagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatg 238  Q
    |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  43999260 ctagcaactgcgccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcactaccaaaaatcgctcgagaataacacctcaatatg 43999161  T
Q  239 gttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  43999160 -----------gtttcgaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 43999079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 32015634 - 32015866
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtt 107  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||    
T  32015634 cgtcttaaaaatgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtt 32015733  T
Q  108 tcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgcc 207  Q
    ||| | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  32015734 tcgtggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgcc 32015833  T
Q  208 agaaatcgctcgagaataacacctcaatatggt 240  Q
    ||||||||||||||||| ||||||| |||||||    
T  32015834 agaaatcgctcgagaatgacacctcgatatggt 32015866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 155 - 331
Target Start/End: Complemental strand, 21643652 - 21643490
Alignment:
Q  155 ctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggttttcgaaaagtttc 254  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||           |||||    
T  21643652 ctccaggataaaacagcccagattctaactgtacgattaaaggttgcactgc---aaatcgctcgagaataacacctcaatatg-----------gtttc 21643567  T
Q  255 gaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  21643566 gaaaagccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 21643490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 19430004 - 19430117
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19430004 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19430103  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  19430104 aaaacagcccagat 19430117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 19435506 - 19435619
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19435506 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19435605  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  19435606 aaaacagcccagat 19435619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 19566153 - 19566266
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19566153 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19566252  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  19566253 aaaacagcccagat 19566266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 19571655 - 19571768
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||| |||||    
T  19571655 attaccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctctaggat 19571754  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  19571755 aaaacagcccagat 19571768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 33616822 - 33616719
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctc 173  Q
    |||| ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |    
T  33616822 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 33616723  T
Q  174 agat 177  Q
    ||||    
T  33616722 agat 33616719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 31030518 - 31030631
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||||||||| | | |||||||||||||||||||||||||| || || |||||||||||||| ||||| |||||||||||||||    
T  31030518 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactacccaaattatgcaaggtagactaacaaccacgccgtctccaggat 31030617  T
Q  164 aaaacagctcagat 177  Q
    |||||||| |||||    
T  31030618 aaaacagcccagat 31030631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 21642809 - 21642740
Alignment:
Q  262 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  21642809 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 21642740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 21643184 - 21643115
Alignment:
Q  262 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  21643184 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 21643115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 32010482 - 32010595
Alignment:
Q  20 atgttgtttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacact 117  Q
    |||||||||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | | |||||||| ||||||| ||||    
T  32010482 atgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctttttaagacatttcgcggcact 32010581  T
Q  118 acctaagttgtgca 131  Q
    |||| | |||||||    
T  32010582 acctgaattgtgca 32010595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 21641684 - 21641616
Alignment:
Q  262 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaaca 330  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| |||||||||||    
T  21641684 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaaca 21641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 21642059 - 21641991
Alignment:
Q  262 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaaca 330  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| |||||||||||    
T  21642059 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaaca 21641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 21642434 - 21642366
Alignment:
Q  262 cactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaaca 330  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| |||||||||||    
T  21642434 cactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaaca 21642366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 13584355 - 13584461
Alignment:
Q  79 cacgaccaggttgttttctttaagacgtttcgcgacactacctaagt--------tgtgcaaggtagactagcaaccgcgccgtctccaggataaaacag 170  Q
    ||||||||||| | | |||||||||||||||||| ||||||| ||||        |||||||||||||||| ||||| ||||||||||||||||||||||    
T  13584355 cacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttcccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacag 13584454  T
Q  171 ctcagat 177  Q
     ||||||    
T  13584455 ttcagat 13584461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 32010595 - 32010659
Alignment:
Q  176 attctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatatggt 240  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||| |||||||    
T  32010595 attcttactctacgattaaaggctacactgccagaaatcgctcgagaatgacacctcgatatggt 32010659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 31449962 - 31449866
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  31449962 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 31449866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 38182333 - 38182237
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | ||||||| |||||||| | |||| || ||| |||||||||| ||| || ||||| ||||| |||||||||||||||    
T  38182333 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaaccacgccgcctccaggataaaaca 38182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 169
Target Start/End: Complemental strand, 43302762 - 43302718
Alignment:
Q  125 ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||    
T  43302762 ttgtgcaaggtagactatcaaccacgccgcctccaggataaaaca 43302718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 44926019 - 44925923
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | ||||||| |||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  44926019 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 44925923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 1807471 - 1807565
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 167  Q
    |||| |||||| |||| | | |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| ||| |||||||||    
T  1807471 tgagtcacgactaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaggataaaa 1807565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 15875758 - 15875668
Alignment:
Q  80 acgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||| | | |||||| ||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  15875758 acgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 15875668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 19166633 - 19166729
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| |||||||| || | | |||||||||||||||| | |||| || ||  ||||||| || |||||| ||||| ||||| |||||||||||||||    
T  19166633 tgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaaccacgccgcctccaggataaaaca 19166729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 33416546 - 33416642
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | ||||  || || |||||||||  |||||| ||||| ||||| ||||| |||||||||    
T  33416546 tgagtcacgaccaggtcggtctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaaca 33416642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 40125981 - 40125885
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacact-acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||| | | | |||||||||||||||| | ||||  || || |||||||||| |||||| ||||| ||||| ||||| |||||||||    
T  40125981 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 40125885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 16539559 - 16539261
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  16539559 tgttgtttttgtaatttgaag-ttacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 16539461  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16539460 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcga 16539361  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    ||||||||||||| ||||           ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||  ||||||| |    
T  16539360 gaataacacctcagtatg-----------gtttcgaaaaaccactctaatatgacacgtagaccactcgagaaaccaaagaaggaggaagaaaagaactg 16539272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 16626103 - 16626401
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  16626103 tgttgtttttgtaatttgaag-ttacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 16626201  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16626202 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcga 16626301  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    ||||||||||||| ||||           ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||  ||||||| |    
T  16626302 gaataacacctcagtatg-----------gtttcgaaaaaccactctaatatgacacgtagaccactcgagaaaccaaagaaggaggaagaaaagaactg 16626390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 34 - 331
Target Start/End: Complemental strand, 2234765 - 2234479
Alignment:
Q  34 atttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaag 133  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||||||    
T  2234765 attttaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggttgctttctttaagacgtttcgcggcactacctaaattgtgcaag 2234666  T
Q  134 gtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 233  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2234665 gtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctca 2234566  T
Q  234 atatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    |||||           ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||| ||||||||||||    
T  2234565 atatg-----------gtttcgaaaaaccactctaatatggtacgcagaccactcgagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 2234479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 18 - 331
Target Start/End: Complemental strand, 21081191 - 21080888
Alignment:
Q  18 aaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacact 117  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||    
T  21081191 aaatgttgttttgg-aatttaaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcact 21081093  T
Q  118 acctaagttgtg--caaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcg 215  Q
    |||||| |||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  21081092 acctaaattgtgtgcaaggtagactagcaaccgcaccgtctccaggataaaacagcccagattctatctgtacgattaaaggctgcactgccagaaatcg 21080993  T
Q  216 ctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaag 315  Q
    |||||||||||||||||||||||           ||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||||||  ||||    
T  21080992 ctcgagaataacacctcaatatg-----------gtttcaaaaaaccactctaatatggtacgtagaccacttaagaaaccaaagaaggaggaagaaaag 21080904  T
Q  316 aacagttcgtcaacac 331  Q
    ||| ||||||||||||    
T  21080903 aacggttcgtcaacac 21080888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 18 - 331
Target Start/End: Original strand, 43892801 - 43893115
Alignment:
Q  18 aaatgttgtttttgtaatttgaaaattacgacagagcttt--gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgaca 115  Q
    |||||||||||||| | ||| ||||||||| |||||||||  ||||  |||||||||||||| ||||||||||| | ||||||||||||||||| || ||    
T  43892801 aaatgttgtttttgga-tttaaaaattacgtcagagctttttgaaataattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcacggca 43892899  T
Q  116 ctacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcg 215  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  43892900 ctacctaagttgtgcaaggtaaactagcaaccgcgccgtctccaggataaaacagctcagattcttactgtacgattaaaggttgcactgctagaaatcg 43892999  T
Q  216 ctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggaggaaagaaa 314  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||  |||||||  |||    
T  43893000 ctcgagaataacacctcggtatgg-tttcgaaaagtttcgaaaaaccactctagtatggcacgtagaccactcgagaaaccaaagaggggaggaagaaaa 43893098  T
Q  315 gaacagttcgtcaacac 331  Q
    ||||  |||||||||||    
T  43893099 gaacgattcgtcaacac 43893115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 42571893 - 42572191
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactac 119  Q
    |||||||||||  |||| ||||||||||| ||||||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||    
T  42571893 tgttgtttttg--attttaaaattacgacggagcttttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 42571990  T
Q  120 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||    
T  42571991 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaaaattaaaggctgcactgccagaaatctctcg 42572090  T
Q  220 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaaca 319  Q
    |||||||||||||||||||           |||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||   |||||||     
T  42572091 agaataacacctcaatatg-----------gtttcgaaaaaccattcaaatatggttcgtagaccactcgagaaaccaaagaaggaggaggaaaagaacg 42572179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 21 - 265
Target Start/End: Complemental strand, 47177268 - 47177024
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagcttt--gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta 118  Q
    ||||||||||| | ||| |||||||||||||||||||  ||||| |||||||||||||| ||||||||||| | |||||||||||||||||||| |||||    
T  47177268 tgttgtttttgga-tttaaaaattacgacagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcacta 47177170  T
Q  119 cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctc 218  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47177169 cctaagttgtgcaaggtagactagcaaccgcgccgtcttcaggataaaacagctcagattcttactgtacgattaaaggctgcactgccagaaatcgctc 47177070  T
Q  219 gagaataacacctcaatatggttttcgaaaagtttcgaaaaaccact 265  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  47177069 gagaataacacctcagtatgg-tttcgaaaagtttcgaaaaaccact 47177024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 331
Target Start/End: Original strand, 12934344 - 12934643
Alignment:
Q  18 aaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacact 117  Q
    |||||||||||||| | ||  |||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||||||||| ||||||| ||||    
T  12934344 aaatgttgtttttggattt--aaaattacgacagagctttgaaactattaccggg-tgagtcacgaccaggtcgctttctttaagacatttcgcggcact 12934440  T
Q  118 acctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgct 217  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| ||    
T  12934441 acctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaagattaaaggttgcactgccagaaatctct 12934540  T
Q  218 cgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaa 317  Q
    |||||||||||||||||||||           ||||||||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||  ||||||    
T  12934541 cgagaataacacctcaatatg-----------gtttcgaaaaaccactcaaatatggttcgtagaccactcgagaaaacaaagaaggaggaagaaaagaa 12934629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 39 - 331
Target Start/End: Original strand, 17495367 - 17495649
Alignment:
Q  39 aaaattacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtag 137  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||    
T  17495367 aaaattacgacagagcttttgaaactattaccgaggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaagttgtgcaaggtag 17495466  T
Q  138 actagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatat 237  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  17495467 actagcaaccgcgccgtctccaagataaaacagcccagattcttactgtacgattaaaggcagcactgccagaaatcgctcgagaataacacctccatat 17495566  T
Q  238 ggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    |           ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||  ||||||| ||||||||||||    
T  17495567 g-----------gtttcaaaaaaccactcttatatggtacgtagaccactcaagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 17495649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 39 - 331
Target Start/End: Complemental strand, 17557847 - 17557565
Alignment:
Q  39 aaaattacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtag 137  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||| | ||| |||||||||||||||| ||||||||||||||||||||||||    
T  17557847 aaaattacgacagagcttttgaaactattaccgaggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaagttgtgcaaggtag 17557748  T
Q  138 actagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctcaatat 237  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  17557747 actagcaaccgcgccgtctccaagataaaacagcccagattcttactgtacgattaaaggcagcactgccagaaatcgctcgagaataacacctccatat 17557648  T
Q  238 ggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    |           ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||  ||||||| ||||||||||||    
T  17557647 g-----------gtttcaaaaaaccactcttatatggtacgtagaccactcaagaaaccaaagaaggaggaagaaaagaacggttcgtcaacac 17557565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 21 - 331
Target Start/End: Complemental strand, 32212803 - 32212502
Alignment:
Q  21 tgttgtttttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactac 119  Q
    ||||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||    
T  32212803 tgttggttttgtaatttaaaaaattatgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactac 32212704  T
Q  120 ctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcg 219  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||    
T  32212703 ctaaattgtgcaaggtagactagcaaccgcgctgtctccaggataaaacagcccagattctttctgtacgattaaaggttgcactgccagaaatcgctcg 32212604  T
Q  220 agaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaag-aaggaggaaagaaagaac 318  Q
    | |||||||||||||||||           ||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||  |||||||    
T  32212603 aaaataacacctcaatatg-----------gtttcgaaaaaccactccaatatggtacgaagaccactcgagaaaccaaagaaaggaggaagaaaagaac 32212515  T
Q  319 agttcgtcaacac 331  Q
     |||| |||||||    
T  32212514 ggttcatcaacac 32212502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 34 - 331
Target Start/End: Complemental strand, 19309746 - 19309460
Alignment:
Q  34 atttgaaaattacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaa 132  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||| | | ||||||| | | |||||||||||||||||| ||| |||||||||||||||    
T  19309746 attttaaaattacgacggagcttttgaaactattaccggggtgagtc-caaccaggtcgctgtctttaagacgtttcgcggcaccacctaagttgtgcaa 19309648  T
Q  133 ggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataacacctc 232  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||| |||||||||||||| ||    
T  19309647 ggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtaacattaaaggctgcactgccagaaatctctcgagaataacacttc 19309548  T
Q  233 aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacagttcgtcaacac 331  Q
    ||||||           |||||||||||||| || |||||||| |||||||||||||| |||||||||||||||||   ||||||||||||||||||||    
T  19309547 aatatg-----------gtttcgaaaaaccagtcaaatatggttcgtagaccactcgagaaaccaaagaaggaggaggaaaagaacagttcgtcaacac 19309460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 47998908 - 47999141
Alignment:
Q  10 cgtcttaaaaatgttgtttttgt-aatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgt 106  Q
    ||||||||||||||||||||| | ||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | ||||||||||||    
T  47998908 cgtcttaaaaatgttgttttttttaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgt 47999007  T
Q  107 ttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgc 206  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  47999008 ttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgc 47999107  T
Q  207 cagaaatcgctcgagaataacacctcaatatggt 240  Q
    |||||||||||||||||| ||||||| |||||||    
T  47999108 cagaaatcgctcgagaatgacacctcgatatggt 47999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 33243111 - 33243345
Alignment:
Q  10 cgtcttaaaaatgttgt--ttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacg 105  Q
    |||||||||||||||||  ||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| |||||||||||   | |||||||||||    
T  33243111 cgtcttaaaaatgttgtctttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcactctctttaagacg 33243210  T
Q  106 tttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactg 205  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  33243211 tttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactg 33243310  T
Q  206 ccagaaatcgctcgagaataacacctcaatatggt 240  Q
    ||||||||||||||||||| ||||||| |||||||    
T  33243311 ccagaaatcgctcgagaatgacacctcgatatggt 33243345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 33237952 - 33238168
Alignment:
Q  26 tttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa 123  Q
    |||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||||||| |    
T  33237952 tttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctga 33238051  T
Q  124 gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaa 223  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33238052 attgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaa 33238151  T
Q  224 taacacctcaatatggt 240  Q
    | ||||||| |||||||    
T  33238152 tgacacctcgatatggt 33238168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 30 - 240
Target Start/End: Original strand, 47993754 - 47993966
Alignment:
Q  30 tgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttg 127  Q
    |||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||| ||||||| | | |||||||||||||||||| |||||||| | |||    
T  47993754 tgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacaaccaggtcgctctctttaagacgtttcgcggcactacctgaattg 47993853  T
Q  128 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcgagaataac 227  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  47993854 tgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgctcgagaatgac 47993953  T
Q  228 acctcaatatggt 240  Q
    ||||| |||||||    
T  47993954 acctcgatatggt 47993966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22857835 - 22857715
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||| ||||| |    
T  22857835 tgttgtttttgtaattttcaaattatgacagagctttgaaactattaccggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactatc 22857736  T
Q  121 taagttgtgcaaggtagacta 141  Q
    |||||||||||||||||||||    
T  22857735 taagttgtgcaaggtagacta 22857715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 33226419 - 33226517
Alignment:
Q  79 cacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagat 177  Q
    ||||||||||| | | |||||||||||||||||| ||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  33226419 cacgaccaggtcgctctctttaagacgtttcgcggcactacctaagttatgcaaggtagactaacaaccacgccgtcaccaggataaaacagctcagat 33226517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 9973452 - 9973557
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||||||| ||||| | |||||||||||||||||| | ||||| |||||||||||||||    
T  9973452 attaccgggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatccaagttgtgcaaggtagacgaacaaccacgccgtctccaggat 9973551  T
Q  164 aaaaca 169  Q
    ||||||    
T  9973552 aaaaca 9973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 64 - 177
Target Start/End: Original strand, 24528344 - 24528457
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| |||| |||| ||||||||||| | | |||||||||||||| ||| || |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  24528344 attatcgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 24528443  T
Q  164 aaaacagctcagat 177  Q
    ||||||||||||||    
T  24528444 aaaacagctcagat 24528457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 28292607 - 28292506
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| | || ||||||||||| | | | |||||||||||||||| ||||| | |||||||||||||||||||| ||||| |||||||||||||||    
T  28292607 attaccgggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 28292509  T
Q  164 aaa 166  Q
    |||    
T  28292508 aaa 28292506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 4579507 - 4579603
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  4579507 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 4579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 19640317 - 19640399
Alignment:
Q  93 tttctttaagacgtttcgcgacactacctaagtt-gtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcag 175  Q
    ||||||||||||||||| ||||| ||||  |||| |||||||||||||||  ||||| || | |||||||||||||||||||||    
T  19640317 tttctttaagacgtttcacgacattacccgagtttgtgcaaggtagactaagaaccgtgc-gcctccaggataaaacagctcag 19640399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 3357728 - 3357634
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaa-gttgtgcaaggtagactagcaaccgcgccgtctccaggataaaa 167  Q
    |||| ||||||||||| | | ||||||||||||||||||  ||  || || ||||||||||| |||||| ||||| ||||||||||| |||||||    
T  3357728 tgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaaccacgccgtctccatgataaaa 3357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 8076040 - 8076145
Alignment:
Q  65 ttaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacct-aagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    |||| ||| |||| ||||||||||| | | |||||||||||||||| | |||| ||| || |||||||||  |||||| ||||| ||| | |||||||||    
T  8076040 ttactgggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggat 8076139  T
Q  164 aaaaca 169  Q
    ||||||    
T  8076140 aaaaca 8076145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 9651063 - 9650967
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  9651063 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 9650967  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 23247029 - 23246933
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | ||||||||| |||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  23247029 tgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23246933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 23866067 - 23866163
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  23866067 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 23866163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 26341198 - 26341294
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||| ||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  26341198 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26341294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 171
Target Start/End: Original strand, 27256234 - 27256339
Alignment:
Q  66 taccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggata 164  Q
    ||||||| |||| ||||||||||| | ||||||||||||   || || ||||| || || ||||||||||||||||| |||||| |  | ||||||||||    
T  27256234 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 27256332  T
Q  165 aaacagc 171  Q
    |||||||    
T  27256333 aaacagc 27256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 44510773 - 44510677
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||| ||| | |||||||||||||| | | ||||  || || |||||||||  |||||| ||||| ||||| |||||||||||||||    
T  44510773 tgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 44510677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 21 - 331
Target Start/End: Original strand, 36958 - 37256
Alignment:
Q  21 tgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacc 120  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||| |||||||    
T  36958 tgttgtttttgtaatttgaaa-ttacgacagagctttgaaactattactggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacc 37056  T
Q  121 taagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||||||    
T  37057 taaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctttctgtacgattaaaggctgcactgccaaaaatcgctcga 37156  T
Q  221 gaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaacag 320  Q
    ||||||||||||||||||           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||| |    
T  37157 gaataacacctcaatatg-----------gtttcaaaaaaccactctaatatggtacgtagaccactcgagaaaccaaagaaggaggaagaaaagaacgg 37245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 203; Significance: 1e-111; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 240
Target Start/End: Original strand, 31481 - 31711
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  31481 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagctttgaaactattaccggggtgagtcacgaccaggtcgctttctttaagacgtttc 31580  T
Q  110 gcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31581 gcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattctaactgtacgattaaaggctgcactgccag 31680  T
Q  210 aaatcgctcgagaataacacctcaatatggt 240  Q
    ||||||||||||||| ||||||| |||||||    
T  31681 aaatcgctcgagaatgacacctcgatatggt 31711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 26313 - 26539
Alignment:
Q  17 aaaatgttgttttt-gtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcga 113  Q
    |||||||||||||| ||||||||||||| |||||  ||||||| ||||||||||||||| ||||  |||| || || | | ||||||||||||||||||     
T  26313 aaaatgttgttttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagttacgatcaagtcgctctctttaagacgtttcgcgg 26412  T
Q  114 cactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaat 213  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||    
T  26413 cactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccatattcttactgtacgattaaaggctgcactgccagaaat 26512  T
Q  214 cgctcgagaataacacctcaatatggt 240  Q
    | ||||||||| ||||||| |||||||    
T  26513 ctctcgagaatgacacctcgatatggt 26539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 13900 - 13588
Alignment:
Q  10 cgtcttaaaaatgttgtttttgtaatttgaaaattacgacagagcttt--gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtt 107  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||  ||||| |||||||||||||| ||||||||||| | |||||||||||||||    
T  13900 cgtcttaaaaatgttgtttttgga-tttaaaaattacgacagagctttttgaaacaattaccggggtgagtcacgaccaggtcgctttctttaagacgtt 13802  T
Q  108 tcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgcc 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  13801 tcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgcc 13702  T
Q  208 agaaatcgctcgagaataacacctcaatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaaga-aggag 306  Q
    |||||||||||||||||||||||||| ||||           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||    
T  13701 agaaatcgctcgagaataacacctcagtatg-----------gtttcgaaaaaccactctaatatggcacgtagaccactcgagaaaccaaagaggggag 13613  T
Q  307 gaaagaaagaacagttcgtcaacac 331  Q
    |||  ||||||  ||||||||||||    
T  13612 gaagaaaagaatggttcgtcaacac 13588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 27 - 331
Target Start/End: Complemental strand, 19341 - 19041
Alignment:
Q  27 ttttgtaatttgaaaa-ttacgacagagctttgaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagt 125  Q
    ||||||| |||||||| |||||||||||||| |||| |||||| |||||||| |||||||| || | |||||||||||||||||||| ||||||||||||    
T  19341 ttttgtagtttgaaaaattacgacagagcttcgaaaatattactggggtgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaagt 19242  T
Q  126 tgtgcaaggtagactagcaacc---gcgccgtctccaggataaaacagctcagattct--aactgtacgattaaaggctgcactgccagaaatcgctcga 220  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  19241 tgtgcaaggtagactagcaaccgcggcgccgtctccaggataaaacagcccagattctaaaactgtacgattaaaggtttcactgccagaaatcgctcga 19142  T
Q  221 gaataacacctc-aatatggttttcgaaaagtttcgaaaaaccactctaatatggtacgtagaccactcgataaaccaaagaaggaggaaagaaagaaca 319  Q
    |||||||||||| ||||||           ||||||||||||||||| |||| |||||| ||||| ||||| |||||||||||||||||   |||||||     
T  19141 gaataacacctcaaatatg-----------gtttcgaaaaaccactcaaatacggtacgcagaccgctcgagaaaccaaagaaggaggaggaaaagaacg 19053  T
Q  320 gttcgtcaacac 331  Q
    ||||||||||||    
T  19052 gttcgtcaacac 19041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 3001 - 3224
Alignment:
Q  19 aatgttgtttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacac 116  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||    
T  3001 aatgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcac 3100  T
Q  117 tacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgc 216  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  3101 tacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgc 3200  T
Q  217 tcgagaataacacctcaatatggt 240  Q
    |||||||| ||||||| |||||||    
T  3201 tcgagaatgacacctcgatatggt 3224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 81534 - 81311
Alignment:
Q  19 aatgttgtttttgtaatttgaaaat-tacgacagagcttt-gaaactattaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacac 116  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||| |||| ||||||||||| | | |||||||||||||||||| |||    
T  81534 aatgttgtttttgtaatttgaaaatatacgatggagcttttgaaactattaccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcac 81435  T
Q  117 tacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagattctaactgtacgattaaaggctgcactgccagaaatcgc 216  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  81434 tacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagattcttactgtacgattaaaggctgcactgccagaaatcgc 81335  T
Q  217 tcgagaataacacctcaatatggt 240  Q
    |||||||| ||||||| |||||||    
T  81334 tcgagaatgacacctcgatatggt 81311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 7052 - 7149
Alignment:
Q  80 acgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagat 177  Q
    |||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  7052 acgaccaggtcgttctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagctcagat 7149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 1570 - 1668
Alignment:
Q  79 cacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagctcagat 177  Q
    ||||||||||| | | |||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  1570 cacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccagat 1668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 2877 - 2765
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| |   |||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  2877 attaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 2778  T
Q  164 aaaacagctcaga 176  Q
    |||||||| ||||    
T  2777 aaaacagcccaga 2765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 176
Target Start/End: Complemental strand, 10837 - 10725
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggat 163  Q
    ||||||||| |||| ||||||||||| |   |||||||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  10837 attaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 10738  T
Q  164 aaaacagctcaga 176  Q
    |||||||| ||||    
T  10737 aaaacagcccaga 10725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 34074 - 33968
Alignment:
Q  64 attaccggggtgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccagga 162  Q
    |||| |||| |||| ||||||||||| | | |||||||||||||||||| ||||||| ||| |||| ||||||||| || ||||||| ||  || |||||    
T  34074 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccaaagtttgtacaaggtagaataacaaccgctcctccttcagga 33975  T
Q  163 taaaaca 169  Q
    |||||||    
T  33974 taaaaca 33968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 7103 - 7199
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  7103 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 7199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 9983 - 9887
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  9983 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 35654 - 35729
Alignment:
Q  95 tctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||||||||||||||| ||||||  || || |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  35654 tctttaagacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 35729  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 83065 - 83161
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacacta-cctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||||||||| ||||| | || || || ||||||| |||||| |||||  |||| |||||||||||||||    
T  83065 tgagtcacgaccaggtcgctctctttaagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccaggataaaaca 83161  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 4073 - 4169
Alignment:
Q  74 tgagccacgaccaggttgttttctttaagacgtttcgcgacactacctaag-ttgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 169  Q
    |||| ||||||||||| | | |||||||||| ||||| | |||| || ||  |||||||||| |||||| ||||| ||||| |||||||||||||||    
T  4073 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 4169  T

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