View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9917A_low_160 (Length: 261)
Name: NF9917A_low_160
Description: NF9917A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9917A_low_160 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 164073 - 164331
Alignment:
| Q |
1 |
agattcaacagacatggctgagagtgttcaaaaaatatggatcaagttcgttgttatgcaaaagctcatgataccacaaaaagggttagaaatgaactat |
100 |
Q |
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| T |
164073 |
agattcaacagacatggctgagagtgttcaaaaaatatggatcaagttcgttgttatgcaaaagctcatgataccataaaaagggttagaaatgaactat |
164172 |
T |
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| Q |
101 |
tgagttgcattagaatgaaagaacgctttatataaatagcactgtcagttactgcaatgttaggaacaaatacatacaagaaggaacataacgaatctcc |
200 |
Q |
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| T |
164173 |
tgagttgcattagaatgaaagaacgctttatataaatagcactgtcagttactgcaatgttaggaacaaatacatacaagtaggaacataacgaatctcc |
164272 |
T |
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| Q |
201 |
atgataacagttaaagaattctaattataaaccataatagaaagcttataactagtgat |
259 |
Q |
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| T |
164273 |
atgataacagttaaagaattctaattataaaccataatagaaagcttataactagtgat |
164331 |
T |
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