View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9917A_low_202 (Length: 248)

Name: NF9917A_low_202
Description: NF9917A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9917A_low_202
NF9917A_low_202
[»] chr7 (31 HSPs)
chr7 (17-212)||(21681249-21681446)
chr7 (1-215)||(21627746-21627961)
chr7 (105-215)||(21740671-21740781)
chr7 (86-206)||(21704307-21704426)
chr7 (1-130)||(21991458-21991586)
chr7 (76-144)||(21622745-21622813)
chr7 (1-215)||(21689035-21689242)
chr7 (95-215)||(21713825-21713942)
chr7 (141-213)||(21651734-21651806)
chr7 (146-215)||(21784566-21784635)
chr7 (155-215)||(21663698-21663758)
chr7 (1-215)||(21791645-21791852)
chr7 (1-63)||(21791512-21791574)
chr7 (147-215)||(21725571-21725639)
chr7 (16-63)||(21663875-21663922)
chr7 (150-205)||(21784691-21784746)
chr7 (147-205)||(21771645-21771703)
chr7 (159-214)||(21991408-21991463)
chr7 (17-63)||(21788002-21788048)
chr7 (18-63)||(21704425-21704470)
chr7 (163-214)||(21622693-21622744)
chr7 (1-51)||(21622830-21622880)
chr7 (21-63)||(21651859-21651901)
chr7 (152-190)||(21787911-21787949)
chr7 (26-63)||(21639468-21639505)
chr7 (26-63)||(21771759-21771796)
chr7 (26-63)||(21785163-21785200)
chr7 (129-215)||(21639321-21639404)
chr7 (17-63)||(21713976-21714022)
chr7 (181-215)||(21791419-21791453)
chr7 (26-63)||(21725694-21725731)
[»] scaffold0182 (2 HSPs)
scaffold0182 (147-215)||(34209-34277)
scaffold0182 (26-63)||(34332-34369)


Alignment Details
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 212
Target Start/End: Complemental strand, 21681446 - 21681249
Alignment:
Q  17 ctctcaaacctttaactaatgaacaagataagtaaatatgcttgcttcnnnnnnn--tgttacacttcactttaatatattttttatacctgtcctcttt 114  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||          | | |||||||||||||||| ||||||||||||||||||||||    
T  21681446 ctctcaaacctttacctaataaacaagataagtaaatatgcttgcttaaaaaaaaaatctcacacttcactttaatagattttttatacctgtcctcttt 21681347  T
Q  115 gttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgct 212  Q
    | |||||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  21681346 gctactaaagcaacttgtcctcagaacaaactatataatgtctatcactttactcaatggacaagaaaagtaaaattcatggaaattggatctttgct 21681249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21627961 - 21627746
Alignment:
Q  1 gctttagagtttcaatctctcaaacctttaactaatgaacaagataagtaaatatgcttgcttcnnnnnnn-tgttacacttca-ctttaatatattttt 98  Q
    |||||||| |||||  |||||||||||||| ||||||| ||||||||||||||||||||||||         | |||||||||| |||||||  ||||||    
T  21627961 gctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacacttcaactttaatcaattttt 21627862  T
Q  99 tatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaa 198  Q
     ||||||||||||||   | ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  21627861 -atacctgtcctcttcactgctaaagtaacttgtcctcagaacaaactatataatgtccatcactttactcaacggacaagaaaagtaaaattcatggaa 21627763  T
Q  199 aaaggatcattgctttt 215  Q
    | |||||| ||||||||    
T  21627762 ataggatcgttgctttt 21627746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 105 - 215
Target Start/End: Complemental strand, 21740781 - 21740671
Alignment:
Q  105 tgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaagga 204  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21740781 tgtcctctttgttactaaagtaacttgtcctcataacaaactatataatgtccatcactttactcaatggacaagaaaagtaaaattcatggaaaaagga 21740682  T
Q  205 tcattgctttt 215  Q
    |||||||||||    
T  21740681 tcattgctttt 21740671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 21704426 - 21704307
Alignment:
Q  86 ttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagt 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||||    
T  21704426 ttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagaacaaa-tatataatgtccatcactttactcaatgtacaagaaaagt 21704328  T
Q  186 aaaattcatggaaaaaggatc 206  Q
    |||||||  ||||| ||||||    
T  21704327 aaaattctcggaaacaggatc 21704307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 21991586 - 21991458
Alignment:
Q  1 gctttagagtttcaatctctcaaacctttaactaatgaacaagataagtaaatatgcttgcttcnnnnnnntgttacacttcactttaatatatttttta 100  Q
    |||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||||||||    
T  21991586 gctttagattttcattctctcgaacctttacctaatgaacaagataagtaaatatgcttgctt-aaaaaaatgttacacttcactttaatagatttttta 21991488  T
Q  101 tacctgtcctctttgttactaaagtaactt 130  Q
    ||| ||||||||||  ||||||||||||||    
T  21991487 tacttgtcctctttactactaaagtaactt 21991458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 21622813 - 21622745
Alignment:
Q  76 acacttcactttaatatattttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaa 144  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21622813 acacttcactttaatagattttttatacctgtcctcttttttactaaagtaacttgtcctcagaacaaa 21622745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21689242 - 21689035
Alignment:
Q  1 gctttagagtttcaatctctcaaacctttaactaatgaacaagataagtaaatatgcttgcttcnnnnnnntgttacactt-cactttaatatatttttt 99  Q
    |||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||        | |||||||| |||||||| ||  |||||    
T  21689242 gctttagattttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt----aaaatattacacttccactttaa-atgattttt 21689148  T
Q  100 atacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaa 199  Q
    ||||||||||||||   | |||||||||||||| ||| || | |||||    | |||||  |||| |||||||||  |||||||||||||||||||||||    
T  21689147 atacctgtcctcttcactgctaaagtaacttgttctcggaacgaacta---cacgtccaccacttaactcaatggggaagaaaagtaaaattcatggaaa 21689051  T
Q  200 aaggatcattgctttt 215  Q
    | ||||  ||||||||    
T  21689050 agggatatttgctttt 21689035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 21713942 - 21713825
Alignment:
Q  95 tttttatacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcat 194  Q
    ||||||||| |||||||||   | |||||||||||||||||| || | ||||||||   |||||   |||||||||||||||||||||||||||||||||    
T  21713942 tttttatacttgtcctcttcactgctaaagtaacttgtcctcggaacgaactatat---gtccaccgctttactcaatggacaagaaaagtaaaattcat 21713846  T
Q  195 ggaaaaaggatcattgctttt 215  Q
    ||||||| |||| ||||||||    
T  21713845 ggaaaaaagatctttgctttt 21713825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 21651806 - 21651734
Alignment:
Q  141 caaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctt 213  Q
    |||||||||||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  21651806 caaactatataatgtctaccactttactcaatggacaagaaatgtaaaattcatggaaaaaggatctttgctt 21651734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 21784635 - 21784566
Alignment:
Q  146 tatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 215  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||  ||||||||    
T  21784635 tatataatgtccatcactttactcattggacaagaaaagtaaaattcacggaaaaaggatatttgctttt 21784566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 21663758 - 21663698
Alignment:
Q  155 tccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 215  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21663758 tccatcactttgctcaatggacaagaaaagtaaaattcatggaaataggatcattgctttt 21663698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21791852 - 21791645
Alignment:
Q  1 gctttagagtttcaatctctcaaacctttaactaatgaacaagataagtaaatatgcttgcttcnnnnnnntgttacactt-cactttaatatatttttt 99  Q
    |||||||| |||||  || ||||||||||| ||| ||||||||||||||||||||||||||||        | |||||||| ||||||||| |  |||||    
T  21791852 gctttagattttcatgctttcaaacctttacctactgaacaagataagtaaatatgcttgctt----aaaatattacacttccactttaat-tgattttt 21791758  T
Q  100 atacctgtcctctttgttactaaagtaacttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaa 199  Q
    ||||||||||||||   | |||||||||||||| ||| || | |||||    | |||||  | || |||||||||| |||||||||||||||||||||||    
T  21791757 atacctgtcctcttcactgctaaagtaacttgttctcggaacgaacta---cacgtccaccagttaactcaatggagaagaaaagtaaaattcatggaaa 21791661  T
Q  200 aaggatcattgctttt 215  Q
    | ||||  ||||||||    
T  21791660 agggatatttgctttt 21791645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21791574 - 21791512
Alignment:
Q  1 gctttagagtttcaatctctcaaacctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    |||||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  21791574 gctttagattttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 21791512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 21725639 - 21725571
Alignment:
Q  147 atataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 215  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||  ||||||||    
T  21725639 atataatgtccatcactttactcattggacaagaaaagtaaaattcacagaaaaaggatatttgctttt 21725571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 21663922 - 21663875
Alignment:
Q  16 tctctcaaacctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21663922 tctctcaaacctttacctaatgaacaagataagtaaatatgcttgctt 21663875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 21784746 - 21784691
Alignment:
Q  150 taatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggat 205  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  21784746 taatgttcatcactttactcaatggacaagaaaagtaaaattcacggaaaaaggat 21784691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 21771703 - 21771645
Alignment:
Q  147 atataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggat 205  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||    
T  21771703 atataatgtccatcactttactcattggacaagaaaagtaaaattcacagaaaaaggat 21771645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 21991463 - 21991408
Alignment:
Q  159 taactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgcttt 214  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||  |||||||    
T  21991463 taactttactcaatagacaagaaaagtgaaattcatggaaaaaggatatttgcttt 21991408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 21788048 - 21788002
Alignment:
Q  17 ctctcaaacctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||    
T  21788048 ctctcaaacctttacctaatgaacaagataactaaatatgcttgctt 21788002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 21704470 - 21704425
Alignment:
Q  18 tctcaaacctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||    
T  21704470 tctcaaacctttacctaatgaacaagataactaaatatgcttgctt 21704425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 21622744 - 21622693
Alignment:
Q  163 tttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgcttt 214  Q
    ||||||| ||||||||||||||||||||||||||||| || ||| |||||||    
T  21622744 tttactcgatggacaagaaaagtaaaattcatggaaatagtatctttgcttt 21622693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21622880 - 21622830
Alignment:
Q  1 gctttagagtttcaatctctcaaacctttaactaatgaacaagataagtaa 51  Q
    |||||||| |||||  |||||||||||||| ||||||||||||||||||||    
T  21622880 gctttagattttcatgctctcaaacctttacctaatgaacaagataagtaa 21622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 21651901 - 21651859
Alignment:
Q  21 caaacctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  21651901 caaacctttacctaattaacaagataagtaaatatgcttgctt 21651859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 21787949 - 21787911
Alignment:
Q  152 atgtccataactttactcaatggacaagaaaagtaaaat 190  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  21787949 atgtccatcactttactcaatggacaagaaaagtaaaat 21787911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 21639505 - 21639468
Alignment:
Q  26 ctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21639505 ctttacctaatgaacaagataagtaaatatgcttgctt 21639468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 21771796 - 21771759
Alignment:
Q  26 ctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21771796 ctttacctaatgaacaagataagtaaatatgcttgctt 21771759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 21785200 - 21785163
Alignment:
Q  26 ctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21785200 ctttacctaatgaacaagataagtaaatatgcttgctt 21785163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 21639404 - 21639321
Alignment:
Q  129 ttgtcctcagagcaaactatataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 215  Q
    ||||||||| | ||||||||||   |||||  ||||||||||||| |||| | |||||||||| ||| |||||||||| ||||||||    
T  21639404 ttgtcctcataacaaactatat---gtccaccactttactcaatgtacaaaataagtaaaattaatgaaaaaaggatctttgctttt 21639321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 21714022 - 21713976
Alignment:
Q  17 ctctcaaacctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    |||||||||||||| |||||||||||| ||||||||| ||||| |||    
T  21714022 ctctcaaacctttacctaatgaacaagttaagtaaatctgctttctt 21713976  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 21791453 - 21791419
Alignment:
Q  181 aaagtaaaattcatggaaaaaggatcattgctttt 215  Q
    |||||||||||||||||||||||||| ||||||||    
T  21791453 aaagtaaaattcatggaaaaaggatctttgctttt 21791419  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 21725731 - 21725694
Alignment:
Q  26 ctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  21725731 ctttacctaatgaacaagataagtaaatatgcgtgctt 21725694  T

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Target: scaffold0182 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 34277 - 34209
Alignment:
Q  147 atataatgtccataactttactcaatggacaagaaaagtaaaattcatggaaaaaggatcattgctttt 215  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||  ||||||||    
T  34277 atataatgtccatcactttactcattggacaagaaaagtaaaattcacagaaaaaggatatttgctttt 34209  T

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Target: scaffold0182; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 34369 - 34332
Alignment:
Q  26 ctttaactaatgaacaagataagtaaatatgcttgctt 63  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  34369 ctttacctaatgaacaagataagtaaatatgcgtgctt 34332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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