View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9917A_low_326 (Length: 227)
Name: NF9917A_low_326
Description: NF9917A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9917A_low_326 |
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Alignment Details
Target: chr6 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 25 - 209
Target Start/End: Complemental strand, 33650050 - 33649868
Alignment:
| Q |
25 |
ggaagatgcaattagagcttaaaattgaagtagtcatcgttagacccaccaagatatgaaatttaaccgttggatcaaaatcggacgctaacgattttaa |
124 |
Q |
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| T |
33650050 |
ggaagatgcaattagagcttaaaattgaagtagtcattgttagacccaccaagatatgaaatttaaccgttggatcaaaatcggacgctaacgattttaa |
33649951 |
T |
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| Q |
125 |
actcggtattttagnnnnnnnnnnnnctttaaataatcaaatcatgtattgaaatttggatctatcaatctcatatccgaatatt |
209 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
33649950 |
actcggtattttag--ttttttttttctttaaataatcaaatcatgtattgaaatttggatctatcaatctcatatccaaatatt |
33649868 |
T |
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