View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9917A_low_37 (Length: 388)
Name: NF9917A_low_37
Description: NF9917A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9917A_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 6 - 287
Target Start/End: Original strand, 44999073 - 44999350
Alignment:
| Q |
6 |
aaacagagaaaacaggggaggatgaagtaaatgtatggacaatttcttatttcattaccaagagtatcatagagaggcacacaaaccaagctatgggcgc |
105 |
Q |
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| T |
44999073 |
aaacagagaaaacaggggaggatgaagtaaatgtatggacaatttcttatattattaccaagagtatcatagagaggcacacaaaccaagctatgggcgc |
44999172 |
T |
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| Q |
106 |
aacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaaggaaaaaataaataaataaagaaatgtgag |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
44999173 |
aacaagcctacatacatcaacataaacaagtttatgaattataatagaacacaatcatatatagaaggaaggaaaaaataaataaat----aaatgtgag |
44999268 |
T |
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| Q |
206 |
aacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaactccaattcgtgagcccta |
287 |
Q |
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| T |
44999269 |
aacgttatatagaaatgggaacctccattgccacaatccactgaggacaatttgatccataaactccaattcgtgagcccta |
44999350 |
T |
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