View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9917A_low_38 (Length: 385)
Name: NF9917A_low_38
Description: NF9917A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9917A_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 7 - 373
Target Start/End: Original strand, 32257523 - 32257889
Alignment:
| Q |
7 |
gttgttggtgcagaaatggacaagaatgtcaatcttgaacacagctggttcatataaattcagcagtgaccggactatccatgaatatgctagagatata |
106 |
Q |
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| T |
32257523 |
gttgttggtgcagaaatggacaagaatgtcaatcttgaacacagctggttcatataaattcagcagtgaccggactatccatgaatatgctagagatata |
32257622 |
T |
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| Q |
107 |
tggagaattgagccagttgtattgccttgaaaagttatgcatgttctggtttaagcttctaaggcatattcaatttcttccttctctcacaatgaagttc |
206 |
Q |
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| T |
32257623 |
tggagaattgagccagttgtattgccttgaaaagttatgcatgttctggtttaagcttctaaggcatattcaatttcttccttctctcacaatgaagttc |
32257722 |
T |
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| Q |
207 |
acaaaggcttgaaaactgacgacgcataaagctttccggttaagatatttgaacattttttactccaggaatatgttacattcatacgattatgttctat |
306 |
Q |
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| T |
32257723 |
acaaaggcttgaaaactgacgacgcataaagttttccggttaagatatttgaacattttttactccaggaatatgttacattcatacgattatgttctat |
32257822 |
T |
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| Q |
307 |
gaaaaagtaatttcttaattattttatggtccaatttttcaaatgaggatgttgataaggttatatt |
373 |
Q |
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| T |
32257823 |
gaaaaagtaatttcttaattattttatggtccaattttccaaatgaggatgttgataaggttatatt |
32257889 |
T |
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