View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9918_low_25 (Length: 294)
Name: NF9918_low_25
Description: NF9918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9918_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 32163489 - 32163766
Alignment:
| Q |
1 |
attggaaaatattgttatgggaaagttacttcatgttctggtagttaagtatggattggatgatacttcattgaggaattctcttgttgatatgtatgcg |
100 |
Q |
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| T |
32163489 |
attggaaaatattgttatgggaaagttacttcatgttctggtagttaagtatggattggatgatacttcattgaggaattctcttgttgatatgtatgcg |
32163588 |
T |
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| Q |
101 |
aagtgtggacttattcctgatgcacattatgtgtttgcaactacggtggataaggatgttgtttcttggaattcggttatttcgggttatgcacagagtg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32163589 |
aagtgtggacttattcctgatgcacattatgtgtttgcaactacggtggataaggatgttgtttcttggaattcggttatttcgggttatgcacagagtg |
32163688 |
T |
|
| Q |
201 |
gatcagcatatgaagcccttgagctcttcaacaggatgagaatggaatcgtttttgccagatgcggttacggttgttg |
278 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32163689 |
gatcagcatatgaagcccttgatctcttcaacaggatgagaatggaatcgtttttgccagatgcggttacggttgttg |
32163766 |
T |
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