View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9919_low_17 (Length: 244)
Name: NF9919_low_17
Description: NF9919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9919_low_17 |
 | |
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| [»] chr1 (5 HSPs) |
| |
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| [»] chr7 (4 HSPs) |
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| [»] chr4 (3 HSPs) |
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| [»] chr3 (2 HSPs) |
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| [»] chr2 (3 HSPs) |
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| [»] chr6 (2 HSPs) |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 13868107 - 13867864
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13868107 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccataaagtaccaaaagtagcacaatgtagaaataaatgagaaacag |
13868008 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
200 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13868007 |
actctgccatgccacacccagtaacacacaatgctgcctcgccaacaatgataccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
13867908 |
T |
|
| Q |
201 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13867907 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
13867864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 45795267 - 45795315
Alignment:
| Q |
196 |
aacaatctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45795267 |
aacaatccccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
45795315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33150843 - 33150937
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgaga |
95 |
Q |
| |
|
|||||||||||||| || |||||||||||||| |||||| |||||| || ||||||||| | |||||||| || || || |||||||||||||| |
|
|
| T |
33150843 |
tcaatattaagggggtcggcacctgacattccgatccaagacctgataagatgccacaatgagccaaaagtggcgcagtgaataaataaatgaga |
33150937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 26510646 - 26510406
Alignment:
| Q |
4 |
atattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacagact |
103 |
Q |
| |
|
||||||| ||| ||| ||||||||||||| |||||| |||||| | ||||||||| ||||| ||| | |||||||| ||||| || |||| |||||| |
|
|
| T |
26510646 |
atattaaaggggtcaacacctgacattccgatccaagacctgatatgatgccacaatgtaccgaaaatggcacaatgaataaacaagtgaggcgcagact |
26510547 |
T |
|
| Q |
104 |
cagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaatct |
203 |
Q |
| |
|
| || |||| || || |||||||||| |||| ||| | |||| | ||||| | | ||| | |||||||||||||||||| ||||| ||||| | |
|
|
| T |
26510546 |
cttccttgccgcatcctgtaacacacataactgcttcggtattgattactccacgtctcataagattattcttagtcggcaacctgtcccgcaacaaccg |
26510447 |
T |
|
| Q |
204 |
ccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| || ||||||| |
|
|
| T |
26510446 |
tcaagcaaagatggagaccttcagcggcacttgcttatgcc |
26510406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 5808740 - 5808801
Alignment:
| Q |
171 |
attcttagtcggcaacctatcccgtaacaatctccaagcaaaaatggaaaccttaagcggca |
232 |
Q |
| |
|
|||||||||||||||||| || || ||||| | ||||||||| || |||||||| ||||||| |
|
|
| T |
5808740 |
attcttagtcggcaacctgtctcgcaacaaccgccaagcaaagatagaaacctttagcggca |
5808801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 35213481 - 35213724
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||| |
|
|
| T |
35213481 |
tcaatattaaggggatcaacacctgacattccaatccaacacctgacaaaatgccacaaagtaacgaaagtagcacaatgtataaataaatgggaaacag |
35213580 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
200 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35213581 |
actctgccatgccgcacccagtaacacacaatgctgcctcgccaacaatgatgccatgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
35213680 |
T |
|
| Q |
201 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
35213681 |
tcttcaagcaaaaatggaaaccttaagcggcacttgattatgcc |
35213724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 244
Target Start/End: Original strand, 26855563 - 26855804
Alignment:
| Q |
3 |
aatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacagac |
102 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||| || |||||| || ||||||||||| ||||||||| | ||||| ||||| | |||||| || | |
|
|
| T |
26855563 |
aatattaaaagggtcagcacctgacattccgatcaaagacctgataagatgccacaaagaaccaaaagtggtgcaatgaataaaaagatgagatgtagtc |
26855662 |
T |
|
| Q |
103 |
tcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaatc |
202 |
Q |
| |
|
|| |||| || ||||| || ||||||| ||||||| |||| |||||||||| | ||| ||||||||||||||||||||||| || || |||| |
|
|
| T |
26855663 |
tcttccataccgcaccctgtgacacacatacaagcctcgctgttgattatgccacgcctaaaaagatgattcttagtcggcaacctatcacgcaataatc |
26855762 |
T |
|
| Q |
203 |
tccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
26855763 |
gccaagcaaaaatggaaaccttgagcggcacctgcttatgcc |
26855804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 44433425 - 44433496
Alignment:
| Q |
171 |
attcttagtcggcaacctatcccgtaacaatctccaagcaaaaatggaaaccttaagcggcacctgattatg |
242 |
Q |
| |
|
|||||| || || ||||| || || |||||||||||||||||||| || ||||| ||||| ||||||||||| |
|
|
| T |
44433425 |
attcttggttggtaacctgtcacgcaacaatctccaagcaaaaatagacaccttcagcggtacctgattatg |
44433496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 4077297 - 4077366
Alignment:
| Q |
175 |
ttagtcggcaacctatcccgtaacaatctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
||||| ||||| ||||| || | ||| |||||||||||||| |||||||| | ||||||||| ||||||| |
|
|
| T |
4077297 |
ttagtaggcaatctatcacgaagcaacctccaagcaaaaatagaaaccttcaacggcacctggttatgcc |
4077366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 43517022 - 43516779
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
43517022 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgataaaatgccacaaagtaccgaaagtagcacaatgtataaataaatgagaaacag |
43516923 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
200 |
Q |
| |
|
||| | |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| |||||| |
|
|
| T |
43516922 |
actatgtcatgccgcacccagtaacacacaatgctacctcgccaacgatgatgccacgccggaggagatgattcttagtcggcaacctatcccataacaa |
43516823 |
T |
|
| Q |
201 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43516822 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
43516779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 20543933 - 20544176
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| |||||| |||||| || ||||||||| | ||||||||| || || || |||||||||||||| || |
|
|
| T |
20543933 |
tcaatattaaaggggtcagcacctgacattccgatccaagacctgataagatgccacaatgaaccaaaagtggcgcagtgaataaataaatgagatgtag |
20544032 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
200 |
Q |
| |
|
||| |||| || ||||| || ||||||| || |||||| |||| |||||||||| ||||| || |||||||||||||||||||| || || || |
|
|
| T |
20544033 |
tctcttccataccgcaccctgtgacacacatacttgtctcgccgttgattatgccacgccttagaagatggttcttagtcggcaacctatctcgcaataa |
20544132 |
T |
|
| Q |
201 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
|| ||||| ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
20544133 |
tcgccaagtaaaaatggaaaccttcagcggcacctgcttatgcc |
20544176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 38295784 - 38295820
Alignment:
| Q |
190 |
tcccgtaacaatctccaagcaaaaatggaaaccttaa |
226 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
38295784 |
tcccgtaacaacctccaagcaaaaatggaaactttaa |
38295820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 40513998 - 40513755
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||| |||| |
|
|
| T |
40513998 |
tcaatattaaggggatcagcacatgacattccaatccaacacctgacaaaatgccataaagtaccaaaagtaggacaatgtagaaataaatgagagacag |
40513899 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
200 |
Q |
| |
|
|||| |||||||||||||| | |||||||||||||||||| || | |||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40513898 |
actctgccatgccacacccggaaacacacaatgctgcctcaccgacgatgataccacgccgaagaaggtgattcttagtcggcaacctatcccgtaacaa |
40513799 |
T |
|
| Q |
201 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40513798 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
40513755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 34829267 - 34829510
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
|||||||||| ||| | | ||||||||||||| |||||| |||||| | ||||||||| |||| ||||| |||||||| ||||| || |||| ||| |
|
|
| T |
34829267 |
tcaatattaaaggggttaacacctgacattccgatccaagacctgatatgatgccacaatgtactgaaagtggcacaatgaataaacaagtgaggcgcag |
34829366 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
200 |
Q |
| |
|
|||| || |||| ||||| |||||||||| || | ||| || |||| | ||||| | ||||| | ||||||| ||| |||||| ||||| ||||| |
|
|
| T |
34829367 |
actcttccttgccgcaccctgtaacacacataactacttcggcattgattactccacgtcttagaagattattcttaatcgacaacctgtcccgcaacaa |
34829466 |
T |
|
| Q |
201 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
| ||||||||| ||||| ||||| ||| ||||||| ||||||| |
|
|
| T |
34829467 |
ccgccaagcaaagatggagaccttcagcagcacctgcttatgcc |
34829510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 11196199 - 11196442
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
|||||||||||| | || |||||||||||| |||||| |||||| || ||||||||| | ||||||||| || || || |||||||||||||| || |
|
|
| T |
11196199 |
tcaatattaaggaggtcgacacctgacattctgatccaagacctgataagatgccacaatgaaccaaaagtggcgcagtgaataaataaatgagacgcaa |
11196298 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaa |
200 |
Q |
| |
|
||| ||||| || ||||| |||||||||| ||||||||||| |||| |||||||||| ||||| || |||||||||||||||||||| || ||||| |
|
|
| T |
11196299 |
tctctgccataccgcaccctgtaacacacataactgcctcgccattgattatgccacgccttagaagatggttcttagtcggcaacctatctcgcaacaa |
11196398 |
T |
|
| Q |
201 |
tctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
|| ||||| ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
11196399 |
tcgccaagtaaaaatggaaaccttcagcggcacctgcttatgcc |
11196442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 32624217 - 32624445
Alignment:
| Q |
16 |
tcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacagactcagccatgccac |
115 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || ||||||||| | ||||||||| || ||||| |||||||||||||| || ||| |||| || | |
|
|
| T |
32624217 |
tcagcacctgacattccaatccaagacctgataagatgccacaatgaaccaaaagtggcgcaatgaataaataaatgagatgtagtctcttccataccgc |
32624316 |
T |
|
| Q |
116 |
acccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaatctccaagcaaaaat |
215 |
Q |
| |
|
| || || ||||||| ||||||||| |||| |||||||||| ||||| || |||||||||||||||||||| | || |||| |||| ||||||| |
|
|
| T |
32624317 |
atcctgtgacacacatacatgcctcgccgttgattatgccacgccttagaagatggttcttagtcggcaacctatctctcaataatcgccaaacaaaaat |
32624416 |
T |
|
| Q |
216 |
ggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
||||||||| ||||||||||| ||||||| |
|
|
| T |
32624417 |
ggaaaccttcagcggcacctgcttatgcc |
32624445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 144301 - 144246
Alignment:
| Q |
16 |
tcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagt |
71 |
Q |
| |
|
||||||||||||||||| |||||| |||||| || ||||||||||| ||||||||| |
|
|
| T |
144301 |
tcagcacctgacattccgatccaagacctgataagatgccacaaagaaccaaaagt |
144246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 14687285 - 14687057
Alignment:
| Q |
16 |
tcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacagactcagccatgccac |
115 |
Q |
| |
|
||||||||||||||||| |||||| |||||| || ||||||||||| ||||||||| | ||||| ||||| | |||||| || ||| ||| || | |
|
|
| T |
14687285 |
tcagcacctgacattccgatccaagacctgataagatgccacaaagaaccaaaagtggtgcaatgaataaaaagatgagatgtagtctcttccacaccgc |
14687186 |
T |
|
| Q |
116 |
acccagtaacacacaatgctgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaacaatctccaagcaaaaat |
215 |
Q |
| |
|
|||| || ||||||| |||| | |||| |||||||||| | ||| ||||||||||||||||||||||| || || |||| |||||||||||| |
|
|
| T |
14687185 |
accctgtgacacacatacaaacctcactgttgattatgccacgcctaaaaagatgattcttagtcggcaacctatcacgcaataatcgccaagcaaaaat |
14687086 |
T |
|
| Q |
216 |
ggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
||||||||||||||||||||| ||||||| |
|
|
| T |
14687085 |
ggaaaccttaagcggcacctgcttatgcc |
14687057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 26513744 - 26513815
Alignment:
| Q |
173 |
tcttagtcggcaacctatcccgtaacaatctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||||||||||||||||||||| || || ||||| ||||||| |
|
|
| T |
26513744 |
tcttggtcggcaacctatcccgcaacaactgccaagcaaaaatggaaacctttagaggaacctgcttatgcc |
26513815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 21368210 - 21367967
Alignment:
| Q |
1 |
tcaatattaaggggatcagcacctgacattccaatccaacacctgacaaaatgccacaaagtaccaaaagtagcacaatgtataaataaatgagaaacag |
100 |
Q |
| |
|
||||||||||| || ||||||||||||||||| |||||| |||||| || ||||||||| | ||||||||| || ||||| ||||| | || ||| || |
|
|
| T |
21368210 |
tcaatattaagagggtcagcacctgacattccgatccaagacctgataagatgccacaatgaaccaaaagtggcgcaatgaataaaaagataagatgtag |
21368111 |
T |
|
| Q |
101 |
actcagccatgccacacccagtaacacacaatgc-tgcctcgccaatgatgatgccacgccggagaaggtgattcttagtcggcaacctatcccgtaaca |
199 |
Q |
| |
|
||| |||| || ||||| || ||||| | | | ||||||||| |||| |||||||||| || || || |||||||||||||||||||| | || | |
|
|
| T |
21368110 |
tctcttccataccgcaccctgtgacaca-attacatgcctcgccgttgattatgccacgccttaggagatggttcttagtcggcaacctatctctcaata |
21368012 |
T |
|
| Q |
200 |
atctccaagcaaaaatggaaaccttaagcggcacctgattatgcc |
244 |
Q |
| |
|
||| ||||| ||||||||||||||| |||||||||| ||||||| |
|
|
| T |
21368011 |
atcgccaagaaaaaatggaaaccttcagcggcacctacttatgcc |
21367967 |
T |
|
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