View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9919_low_6 (Length: 411)
Name: NF9919_low_6
Description: NF9919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9919_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 21 - 404
Target Start/End: Complemental strand, 35754008 - 35753624
Alignment:
| Q |
21 |
ttataatagagagtaaaagatacgtagatactacacaattgtcg-gaccattcaaagcagtgtcaaaatgcaatagttgttgccttaatcaacttcatac |
119 |
Q |
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| T |
35754008 |
ttataatggagagtaaaagctacgtagatactacacaattgtcttgaccattcaaagcagtgtcaaaatgcaatagttgttgccttaatcaacttcatac |
35753909 |
T |
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| Q |
120 |
gatgaatacctatgttttaggtaggtacaccaacatgctatgagtttgtaagggtcaatttagtttgatacggttcatacttgcaaattttgcaatgtta |
219 |
Q |
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| T |
35753908 |
gatgaatacctatgttttaggtaggtacaccaacatgctatgagtttgtaagggtcaatttagtttgatatggttcatacttgcaaattttgcaatgtta |
35753809 |
T |
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| Q |
220 |
aacatcttatttttgaagttgatcttggttatacgagatcacacgcaccaatgttgttaaacattacacaagacttgtctcgtatggaacagacatcaca |
319 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |
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| T |
35753808 |
aacatcttatttttgaagttgatcttggttatacgagatcacacgcaccaatgttgttaaacattacacaagacttgtctcgtatggaacggacatcata |
35753709 |
T |
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| Q |
320 |
aaaaatacgcattaaatcctttattttgtacgtaattaataannnnnnnagttttcaacaccacaattctatgttgtctctgctt |
404 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |
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| T |
35753708 |
aaaaatacgcattaaatcctttattttgtacgtaattaataatttttttagttttcaacaccacaattctatgttgtctttgctt |
35753624 |
T |
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