View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9920_low_2 (Length: 605)
Name: NF9920_low_2
Description: NF9920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9920_low_2 |
 | |
|
| [»] scaffold0425 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 495; Significance: 0; HSPs: 35)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 495; E-Value: 0
Query Start/End: Original strand, 7 - 592
Target Start/End: Complemental strand, 5251183 - 5250589
Alignment:
| Q |
7 |
gatgttaatctgctggagaaacttctaataacactcaattctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaaga |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
5251183 |
gatgttaatctgctggagaaacttctaataacactcaattctatcaaccatgtgttggaagaagcggagatgaagcaataccaaagcatgtacgtgaaga |
5251084 |
T |
|
| Q |
107 |
agtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatctca |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5251083 |
agtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatctca |
5250984 |
T |
|
| Q |
207 |
atcttctactagcaaggtattcgacttcttttcatctttcactaatccatttgagtctaggattatagaattgctagagaagcttgaatttcttgcaaag |
306 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
5250983 |
accttctactagcaaggtattcgacttcttttcatctttcactaatccatttgaatctaggattaaagaattgctagagaagctagaatttcttgcaaag |
5250884 |
T |
|
| Q |
307 |
caaaaggatatgcttggattgaaaca---------tgctagtagtgaaggtggagttatttggaaacccttagatagattgccaactacatctttggtgg |
397 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
5250883 |
caaaaggatatgctcggattgaaacatgaggcttttgctagtagtgaaggtggcgttagttggaaacccttagatagatttccaactacagctttggtgg |
5250784 |
T |
|
| Q |
398 |
atgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcat |
497 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
5250783 |
atgaatcgagcatatatggtagagatggtgacaaggaggagttaattgattttttactgtctgacataaacagtggcaatcatgtaccaataatcagcat |
5250684 |
T |
|
| Q |
498 |
agtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5250683 |
agtgggtctcggtggaatgggtaagaccactcttgctcagcttgcgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
5250589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 7 - 592
Target Start/End: Complemental strand, 5269070 - 5268476
Alignment:
| Q |
7 |
gatgttaatctgctggagaaacttctaataacactcaattctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaaga |
106 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5269070 |
gatgtcaatctgctagagaaacttctaataacactcaattctatcaaccatgtgttggaagaagctgagatgaagcagttccaaagcatgtacgtgaaga |
5268971 |
T |
|
| Q |
107 |
agtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatctca |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||| |
|
|
| T |
5268970 |
agtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatacaccattgaagaagcagaaacttgaatctca |
5268871 |
T |
|
| Q |
207 |
atcttctactagcaaggtattcgacttcttttcatctttcactaatccatttgagtctaggattatagaattgctagagaagcttgaatttcttgcaaag |
306 |
Q |
| |
|
| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
5268870 |
accttctactagcaaggtattcgacttcatttcgtctttcactaatccatttgagtctaggatcaaagaattgctagagaagctagaatttcttgcaaaa |
5268771 |
T |
|
| Q |
307 |
caaaaggatatgcttggattgaaaca---------tgctagtagtgaaggtggagttatttggaaacccttagatagattgccaactacatctttggtgg |
397 |
Q |
| |
|
|||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5268770 |
caaaagcatatgcttggattaaaacaagacgcttgtgctagtagtgaaggtggagttagttggaaacccttagatagattgccaactacatctttggtgg |
5268671 |
T |
|
| Q |
398 |
atgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcat |
497 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5268670 |
atgaatccagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacaagggcaaccatgtaccaataatcagcat |
5268571 |
T |
|
| Q |
498 |
agtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||| ||||| ||||| ||| |||||| ||||||| |
|
|
| T |
5268570 |
agtgggtctcggtggaatgggtaagaccacccttgctcaactcgtgtacaatgaccaaaggatcaaggagaattttaaacataaagcctgggtct |
5268476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 7 - 592
Target Start/End: Original strand, 4387958 - 4388546
Alignment:
| Q |
7 |
gatgttaatctgctggagaaacttctaataacactcaattctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaaga |
106 |
Q |
| |
|
|||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
4387958 |
gatgataaactgctagagaaacttctaataacactcaattctatcaaccgtgtgttggaagaagcggagatgaagcagtaccaaagcatgtccgtgaaga |
4388057 |
T |
|
| Q |
107 |
agtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatctca |
206 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||| || |
|
|
| T |
4388058 |
agtggcttgatgatcttaaacataatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccattgaagaagcagaaatttgaacct-- |
4388155 |
T |
|
| Q |
207 |
atcttctactagcaaggtattcgacttcttttcatctttcactaatccatttgagtctaggattatagaattgctagagaagcttgaatttcttgcaaag |
306 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||| | |||||||||||||||| | ||||||||||| ||| |
|
|
| T |
4388156 |
----tctactagcaaggtattcaacttcttttcatctttcattaatccatttgaatctaggatcaaagaattgctagagaagttagaatttcttgcgaag |
4388251 |
T |
|
| Q |
307 |
caaaaggatatgcttggattgaaaca---------tgctagtagtgaaggtggagttatttggaaacccttagata-gattgccaactacatctttggtg |
396 |
Q |
| |
|
|||||||||||||| ||| ||||||| ||||||||||||||||||| | | |||||||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
4388252 |
caaaaggatatgctcggactgaaacaagacacctgtgctagtagtgaaggtggactcagttggaaaccctt-gataagatttccaactacatctttggtg |
4388350 |
T |
|
| Q |
397 |
gatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagca |
496 |
Q |
| |
|
|||| || |||||||||||||||| | |||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
4388351 |
gatggatcgagcatatatggtagaaacggtgacaaagaggagttagtcaactttttactgtctgacatagacagcggcaaccaagtaccaataatcagca |
4388450 |
T |
|
| Q |
497 |
tagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
4388451 |
tagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaatgaccgcaggatgaaagagcattttgaacttaaagcttgggtct |
4388546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 23 - 592
Target Start/End: Complemental strand, 5299729 - 5299151
Alignment:
| Q |
23 |
agaaacttctaataacactcaattctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatct |
122 |
Q |
| |
|
||||||||| | | ||||||||||||||||||||||| | |||||||| |||| ||||| ||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
5299729 |
agaaacttcaagttacactcaattctatcaaccatgtactcgaagaagcggagacaaagcaataccaaagctcatacgtgaagaagtggcttggtgatct |
5299630 |
T |
|
| Q |
123 |
taaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatctcaatcttctactagcaag |
222 |
Q |
| |
|
||||||| || ||||| | || || || || |||||||||||||| | ||||| ||||||||||||| ||| |||||| |||||||||||||| |
|
|
| T |
5299629 |
taaacatgttgtgtatgaagcagatcaacttttggatgagattgcaacctacacaccaaacaagaagctgaaagttgattctcaaccttctactagcaag |
5299530 |
T |
|
| Q |
223 |
gtattcgacttcttttcatctttcactaatccatttgagtctaggattatagaattgctagagaagcttgaatttcttgcaaagcaaaaggatatgcttg |
322 |
Q |
| |
|
|||||||||||||||||||| | ||| |||| |||||||||||||| | |||||||||||||||| | |||||||| |||||||||||||||||| | | |
|
|
| T |
5299529 |
gtattcgacttcttttcatcgtgtactgatccctttgagtctaggatcaaagaattgctagagaagttagaatttctagcaaagcaaaaggatatgttag |
5299430 |
T |
|
| Q |
323 |
gattgaaaca---------tgctagtagtgaaggtggagttatttggaaacccttagatagattgccaactacatctttggtggatgaattgagcatata |
413 |
Q |
| |
|
| || ||||| |||||||| |||||||| ||| ||||||| | ||| | |||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
5299429 |
ggttaaaacaagaaatttgtgctagtaatgaaggtgaagtcggttggaaagctttaaaaagattgccaagtacatctttggtggatgaatcgagcatata |
5299330 |
T |
|
| Q |
414 |
tggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtctcggtgga |
513 |
Q |
| |
|
||| |||||||||||||| ||||| ||| ||| |||||||| || |||||||| |||| ||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
5299329 |
tggcagagatggtgacaaagaggaagtaaccaaatttttactttccgacatagatgctggcgaccgtgtaccaataatcagcatagtgggtctaggtgga |
5299230 |
T |
|
| Q |
514 |
atgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
||||| || ||||| |||||||| ||||||||||| || ||| ||| ||| | || |||||||| ||||| ||||||| |
|
|
| T |
5299229 |
atgggaaaaaccacccttgctcaacttgtgtacaataacaacatgatacagaaacagtttgaactaaaagcctgggtct |
5299151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 394 - 592
Target Start/End: Complemental strand, 8455272 - 8455074
Alignment:
| Q |
394 |
gtggatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatca |
493 |
Q |
| |
|
|||||||| | ||||||||||||| |||||| ||| ||||| | |||||||| |||||||| | | || || ||||||||||| || |||||||||| |
|
|
| T |
8455272 |
gtggatgagtcgagcatatatggtcgagatgttgataaggaaaaattaatcaagtttttacttgcaggcaatgatagtggcaaccaggttccaataatca |
8455173 |
T |
|
| Q |
494 |
gcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
||||||| ||| | || || |||||||| ||||| |||||| ||||||||||||| ||| ||| ||| |||||||||||||||||||||| ||||||| |
|
|
| T |
8455172 |
gcatagtcggtttaggagggatgggtaaaaccacccttgctaagcttgtgtacaatgacaacaagataaaggagcattttgaacttaaagcatgggtct |
8455074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 408 - 592
Target Start/End: Complemental strand, 6947873 - 6947689
Alignment:
| Q |
408 |
catatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtctc |
507 |
Q |
| |
|
||||||||||||||||| ||| ||||| |||||||||| |||||||| | | || |||||||||||||| || ||||||||||||||||||||| | |
|
|
| T |
6947873 |
catatatggtagagatgatgataaggacaagttaatcaagtttttacttgcaggcaatgacagtggcaaccaggttccaataatcagcatagtgggttta |
6947774 |
T |
|
| Q |
508 |
ggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
|| || ||||| || ||||| |||||| ||||||||||||| ||| ||| ||| ||||||||||||| |||||| | ||||||| |
|
|
| T |
6947773 |
ggagggatggggaaaaccacccttgctaagcttgtgtacaatgacaacaagatagaggagcattttgaccttaaaacatgggtct |
6947689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 151 - 330
Target Start/End: Original strand, 6447941 - 6448120
Alignment:
| Q |
151 |
ctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatctcaatcttctactagcaaggtattcgacttcttttcatctttcacta |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||| | ||| ||||| || || || | | | |
|
|
| T |
6447941 |
ctgttagatgagattgcaactgatgcaccagtgaagaagctgaaggccgaatctcaaccttctactagcaatattttcaacttcattccaactcttgcca |
6448040 |
T |
|
| Q |
251 |
atccatttgagtctaggattatagaattgctagagaagcttgaatttcttgcaaagcaaaaggatatgcttggattgaaa |
330 |
Q |
| |
|
|||||||||| |||||||| | ||| |||||| |||| || || | ||||||| ||||||||||| |||| | ||||||| |
|
|
| T |
6448041 |
atccatttgaatctaggatcaaagacttgctaaagaatctagattatcttgcagagcaaaaggatgtgctggaattgaaa |
6448120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 6479025 - 6479191
Alignment:
| Q |
38 |
cactcaattctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcata |
137 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||| || |||||||||||||||||| | ||||||||| || || |
|
|
| T |
6479025 |
cactcaattctatcaaccatgtgctggaagaagcagagataaagcagtaccaaatcatatatgtgaagaagtggcttgataaacttaaacatgttgttta |
6479124 |
T |
|
| Q |
138 |
tgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatct |
204 |
Q |
| |
|
||| | ||||| || ||||||||||| | ||||||||| || || |||||||||||||||||| |
|
|
| T |
6479125 |
tgaagcagaccaactattagatgagatatctactgatgcaatgctaaataagctgaaagctgaatct |
6479191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 406 - 592
Target Start/End: Complemental strand, 6736596 - 6736410
Alignment:
| Q |
406 |
agcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtc |
505 |
Q |
| |
|
||||||||||||||||||| ||| ||||| | ||||||| |||||||| | | || |||||||||||||| || |||||||| |||||||||||| |
|
|
| T |
6736596 |
agcatatatggtagagatgatgataaggaaaaactaatcaagtttttacttacaggcaatgacagtggcaaccaggttccaataattagcatagtgggtt |
6736497 |
T |
|
| Q |
506 |
tcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
| || || ||||| || ||||| |||||| ||||||||||||||||| ||| ||| || ||||||||||||||||||| ||||||| |
|
|
| T |
6736496 |
taggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagataaagaagcattttgaacttaaagcatgggtct |
6736410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 487 - 592
Target Start/End: Original strand, 6448286 - 6448391
Alignment:
| Q |
487 |
ataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagctt |
586 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||| || ||| ||| |||||||||||||||||||| ||| |
|
|
| T |
6448286 |
ataatcagcatagtgggtctgggtgggatgggtaagaccacttttgctaagcttgtgtacaatcacaacatgataaaggagcattttgaacttaaatctt |
6448385 |
T |
|
| Q |
587 |
gggtct |
592 |
Q |
| |
|
|||||| |
|
|
| T |
6448386 |
gggtct |
6448391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 6519206 - 6519344
Alignment:
| Q |
39 |
actcaattctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcatat |
138 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| ||| ||||||||||||||| || || |||||||||||||||||||| ||||||||| || ||| |
|
|
| T |
6519206 |
actcaattctatcaaccatgtgcttgaagaagcagagctgaagcagtaccaaaacaaatatgtgaagaagtggcttgatgaacttaaacatgttgtttat |
6519305 |
T |
|
| Q |
139 |
gaggttgaccagctgttagatgagattgcaactgatgca |
177 |
Q |
| |
|
|| | ||||| || |||||||||||| | ||||||||| |
|
|
| T |
6519306 |
gaagcagaccaactattagatgagatttctactgatgca |
6519344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 406 - 592
Target Start/End: Original strand, 6553861 - 6554047
Alignment:
| Q |
406 |
agcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtc |
505 |
Q |
| |
|
|||||||||||||| |||| ||| ||||| | |||||||| |||||||| | || ||| ||||||||| || ||||||||||||||||||||| |
|
|
| T |
6553861 |
agcatatatggtagggatgttgataaggaaaaattaatcaagtttttacttgaaggcaatgacggtggcaaccgggttccaataatcagcatagtgggtt |
6553960 |
T |
|
| Q |
506 |
tcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
| || || ||||| || ||||| |||||| ||||||||||||||||| ||| ||| || ||||||||||||||||||| ||||||| |
|
|
| T |
6553961 |
taggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagataaagaagcattttgaacttaaagcatgggtct |
6554047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 591
Target Start/End: Complemental strand, 8472200 - 8471982
Alignment:
| Q |
373 |
agattgccaactacatctttggtggatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtg |
472 |
Q |
| |
|
|||| ||||||| ||||||| |||||||||| |||| ||||||||| |||||||| || || |||||||| | ||| || ||| ||| |||| || |
|
|
| T |
8472200 |
agatcgccaactgcatctttagtggatgaatcttccatacgtggtagagaaggtgacaaagaagaattaatcaagtatttgctttcttacaacgacaatg |
8472101 |
T |
|
| Q |
473 |
gcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattt |
572 |
Q |
| |
|
||||||| ||| ||| ||||||||||||||| | ||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||| | |||| || |
|
|
| T |
8472100 |
gcaaccaagtatcaactatcagcatagtgggtttgcctgggatggggaagaccacccttgctcagcttgtctacaatgaccagaggatggacaagcagtt |
8472001 |
T |
|
| Q |
573 |
tgaacttaaagcttgggtc |
591 |
Q |
| |
|
||||||||||| ||||||| |
|
|
| T |
8472000 |
tgaacttaaagtttgggtc |
8471982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 394 - 592
Target Start/End: Complemental strand, 8590347 - 8590149
Alignment:
| Q |
394 |
gtggatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatca |
493 |
Q |
| |
|
|||||||| | |||||||||||||||||||| ||| ||| | | ||||||| |||||||| | | || || |||||||||| || |||||||||| |
|
|
| T |
8590347 |
gtggatgagtcgagcatatatggtagagatgttgataagaaaaaactaatcaagtttttacttgcaggcaatgatagtggcaaccgcgttccaataatca |
8590248 |
T |
|
| Q |
494 |
gcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
||||||| ||| | || || ||||| || ||||| |||||| ||||||||||||||||| ||| ||| | ||||||||||| |||||||| ||||||| |
|
|
| T |
8590247 |
gcatagtcggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaacgacaacaagatagaagagcattttgagcttaaagcatgggtct |
8590149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 592
Target Start/End: Original strand, 6721467 - 6721672
Alignment:
| Q |
387 |
atctttggtggatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtacca |
486 |
Q |
| |
|
||||||||||||||||| | |||||||||| |||| ||| || || || |||||||||| || || ||||| | ||||||| |||||| || || |
|
|
| T |
6721467 |
atctttggtggatgaatcggtcatatatggtcgagagcatgagaaagaagaaataatcaatttcttgctttctgatagtgacagtgacaaccaggtgccc |
6721566 |
T |
|
| Q |
487 |
ataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagctt |
586 |
Q |
| |
|
|||||||| ||||||||||| ||| || |||||||| || ||||| |||||||| ||||| ||||||||||| |||||| | |||||||||||||| |
|
|
| T |
6721567 |
ataatcagtatagtgggtctgattgggataggtaagacaacccttgcccagcttgtttacaatgaccacaggatagtggagcaatatgaacttaaagctt |
6721666 |
T |
|
| Q |
587 |
gggtct |
592 |
Q |
| |
|
|||||| |
|
|
| T |
6721667 |
gggtct |
6721672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 406 - 592
Target Start/End: Original strand, 6479405 - 6479591
Alignment:
| Q |
406 |
agcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtc |
505 |
Q |
| |
|
||||||||||| ||||||| ||||||||| || | ||||| |||||||| | | || |||||||| | ||| || || |||||||||||||| ||| |
|
|
| T |
6479405 |
agcatatatggcagagatgttgacaaggaagaacttatcaaatttttacttgcaggcaatgacagtggaacccaggttccgataatcagcatagttggtt |
6479504 |
T |
|
| Q |
506 |
tcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
| || || ||||| || ||||| |||||| |||||||||||||| || ||| ||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
6479505 |
taggagggatggggaaaaccacccttgctaagcttgtgtacaacaacaacaagatagaggaacattttgaacttaaagcatgggtct |
6479591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 373 - 591
Target Start/End: Original strand, 8568338 - 8568556
Alignment:
| Q |
373 |
agattgccaactacatctttggtggatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtg |
472 |
Q |
| |
|
|||||||||||| | |||||||||||||||| |||||||||||||||||| ||| || | | ||||||||| ||| || | |||| || ||| |
|
|
| T |
8568338 |
agattgccaactgcgtctttggtggatgaatcttgcatatatggtagagatgatgataaaaataaaataatcaattatttgcttttagacaatgatggtg |
8568437 |
T |
|
| Q |
473 |
gcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattt |
572 |
Q |
| |
|
|||||||||| |||| || || |||||||| ||||| |||||||||||||| ||||||| ||||| ||||| ||||||| ||| || |||| || |
|
|
| T |
8568438 |
gcaaccatgtgagcgtaataagtattgtgggtctaggtgggatgggtaagaccacccttgctcgacttgtctacaatgaccacaagatagagaagcaatt |
8568537 |
T |
|
| Q |
573 |
tgaacttaaagcttgggtc |
591 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8568538 |
tgaacttaaagcttgggtc |
8568556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 433 - 590
Target Start/End: Complemental strand, 6883111 - 6882954
Alignment:
| Q |
433 |
gaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttg |
532 |
Q |
| |
|
||||| ||||| || |||||||| |||||||| |||||| ||||| || ||| ||||| || ||||||||||| || ||||||||||| ||||| | |
|
|
| T |
6883111 |
gaggaattaattaaatttttactttctgacattcacagtgacaaccttgcacccataattagtatagtgggtctgatggggatgggtaagacaactctcg |
6883012 |
T |
|
| Q |
533 |
ctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggt |
590 |
Q |
| |
|
| |||||||| ||||| ||| ||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
6883011 |
cccagcttgtttacaatgacgacatgatcacggagcattttgaacttaaagcttgggt |
6882954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 592
Target Start/End: Original strand, 6519647 - 6519771
Alignment:
| Q |
468 |
cagtggcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggag |
567 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||||||| | || ||||||||||| ||||| |||||||| | ||| ||||| ||| ||| || || || |
|
|
| T |
6519647 |
cagtggtaaccaggttccaataatcagcatagtgggtttaggaggaatgggtaaaaccacccttgctcaacatgtctacaatgacaacatgacaaagaag |
6519746 |
T |
|
| Q |
568 |
cattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
||||||||||||||||| ||||||| |
|
|
| T |
6519747 |
cattttgaacttaaagcatgggtct |
6519771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 408 - 592
Target Start/End: Original strand, 6590753 - 6590937
Alignment:
| Q |
408 |
catatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtctc |
507 |
Q |
| |
|
||||||||||||||| ||| || ||||| |||| || |||||||| || |||| ||||| |||||||||||| |||||| | ||||||||| | |
|
|
| T |
6590753 |
catatatggtagagagcatgagaaagaggaaataattaaatttttactttcagacagtcacagtcacaaccatgtacccataatctgtatagtgggtatg |
6590852 |
T |
|
| Q |
508 |
ggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
||| ||||||||||| || ||||| | |||||| ||||| ||||||| ||| | |||||| |||||||||||||||||||||| |
|
|
| T |
6590853 |
attgggatgggtaagacaacccttgcccggcttgtttacaaggaccacaagatactggagcaatttgaacttaaagcttgggtct |
6590937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 81 - 204
Target Start/End: Complemental strand, 5281594 - 5281471
Alignment:
| Q |
81 |
gcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcacca |
180 |
Q |
| |
|
||||||| |||||| || || ||||||||||||||||||||||||||| || |||||||| ||||| | || ||||||||||| ||||| |||| | |
|
|
| T |
5281594 |
gcagtacaaaagcacatatgtaaagaagtggcttgatgatcttaaacatgctgtatatgaggcagaccaaattttcgatgagattgctactgacgcacaa |
5281495 |
T |
|
| Q |
181 |
ctgaagaagctgaaagctgaatct |
204 |
Q |
| |
|
||||| |||||||||| ||||||| |
|
|
| T |
5281494 |
ctgaataagctgaaagatgaatct |
5281471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 592
Target Start/End: Original strand, 13270086 - 13270197
Alignment:
| Q |
481 |
gtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaactta |
580 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||||| | |||||||||||||| ||||| ||||| ||||| |||||||| |||||| ||| |
|
|
| T |
13270086 |
gtacccataatcagtatagtgggtctgatggggatgggtaagacagcccttgctcagcttgtttacaatgaccataggatacaggagcagtttgaattta |
13270185 |
T |
|
| Q |
581 |
aagcttgggtct |
592 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13270186 |
aagcttgggtct |
13270197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 6553487 - 6553620
Alignment:
| Q |
44 |
attctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcatatgaggt |
143 |
Q |
| |
|
||||||||||||| || | || ||||| ||||| ||||||||||||| || || |||||||||||||||||||| ||||||||| || ||||||| |
|
|
| T |
6553487 |
attctatcaaccaagtactagacgaagcagagataaagcagtaccaaaacaaatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaggc |
6553586 |
T |
|
| Q |
144 |
tgaccagctgttagatgagattgcaactgatgca |
177 |
Q |
| |
|
||||| || |||||||||||| | ||||||||| |
|
|
| T |
6553587 |
agaccaactattagatgagatttctactgatgca |
6553620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 8455634 - 8455501
Alignment:
| Q |
44 |
attctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcatatgaggt |
143 |
Q |
| |
|
||||||||||||| || | || ||||| ||||| ||||||||||||| || || |||||||||||||||||||||||||||||| || ||||| | |
|
|
| T |
8455634 |
attctatcaaccaagtactagacgaagcagagataaagcagtaccaaaacaaatatgtgaagaagtggcttgatgatcttaaacatgttgtttatgaagc |
8455535 |
T |
|
| Q |
144 |
tgaccagctgttagatgagattgcaactgatgca |
177 |
Q |
| |
|
||||| || |||||||||||| | ||||||||| |
|
|
| T |
8455534 |
agaccaactattagatgagatttctactgatgca |
8455501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 592
Target Start/End: Complemental strand, 5281208 - 5281104
Alignment:
| Q |
488 |
taatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttg |
587 |
Q |
| |
|
|||||| |||||||||| ||||| |||||||||||||| |||||| |||||||||| |||||| | || || | ||||||||||||| ||||||||| |
|
|
| T |
5281208 |
taatcaccatagtgggttctggtgggatgggtaagaccacccttgctgagcttgtgtataacgacgatagaattaaagagcattttgaacataaagcttg |
5281109 |
T |
|
| Q |
588 |
ggtct |
592 |
Q |
| |
|
||||| |
|
|
| T |
5281108 |
ggtct |
5281104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 6948193 - 6948089
Alignment:
| Q |
100 |
gtgaagaagtggcttgatgatcttaaacattatgcatatgaggttgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctg |
199 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || ||||||| ||||| ||||||||||||||| | ||||||||| || || ||||||||||||| |
|
|
| T |
6948193 |
gtgaagaagtggcttgatgaacttaaacatgttgtctatgaggcagaccaactgttagatgagatttctactgatgcaatgctaaataagctgaaagctg |
6948094 |
T |
|
| Q |
200 |
aatct |
204 |
Q |
| |
|
||||| |
|
|
| T |
6948093 |
aatct |
6948089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 204
Target Start/End: Complemental strand, 8590709 - 8590549
Alignment:
| Q |
44 |
attctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcatatgaggt |
143 |
Q |
| |
|
||||||||||| | || |||| ||||| ||||| |||||||||| ||||| || |||||||||||||||||||| ||||||||| || ||||| | |
|
|
| T |
8590709 |
attctatcaacgaagtactggacgaagcagagataaagcagtaccgaagcaaatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaagc |
8590610 |
T |
|
| Q |
144 |
tgaccagctgttagatgagattgcaactgatgcaccactgaagaagctgaaagctgaatct |
204 |
Q |
| |
|
||||| || |||||||||||| | ||||||||| || || |||||||||||| ||||| |
|
|
| T |
8590609 |
agaccaactattagatgagatttctactgatgcaatgctaaataagctgaaagctaaatct |
8590549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 408 - 591
Target Start/End: Complemental strand, 6259786 - 6259603
Alignment:
| Q |
408 |
catatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaaccatgtaccaataatcagcatagtgggtctc |
507 |
Q |
| |
|
||||||||||||||| |||| || ||||| ||||||| |||||||| || |||| ||| | ||||| ||| | |||||||| ||||||||||| |
|
|
| T |
6259786 |
catatatggtagagaacgtgaaaaagaggaaataatcaaatttttactttcagacagttacaaccgaaaccaggtatccataatcagtatagtgggtctg |
6259687 |
T |
|
| Q |
508 |
ggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaaagcttgggtc |
591 |
Q |
| |
|
|| ||||||||||| | ||||| |||||||| ||||| ||||| ||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
6259686 |
acggggatgggtaagacagcccttgcccagcttgtttacaatgaccataggatacaggagcagtttgaatttaaagcttgggtc |
6259603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 548
Target Start/End: Original strand, 6838297 - 6838466
Alignment:
| Q |
379 |
ccaactacatctttggtggatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtggcaacc |
478 |
Q |
| |
|
|||||| |||||||||||||||||| |||| ||||||||| ||||| || || || |||| || | ||| |||||| ||| |||| |||||||| |
|
|
| T |
6838297 |
ccaactgcatctttggtggatgaatcttccatacgtggtagagaaggtgaaaaagaagaaataattaactatttgctgtcttacaaggacaatggcaacc |
6838396 |
T |
|
| Q |
479 |
atgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaa |
548 |
Q |
| |
|
| ||| ||| ||||||||||| ||| | ||||| ||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
6838397 |
aagtatcaactatcagcatagttggtttgggtgggatgggaaagaccacccttgctcagcttgtctacaa |
6838466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 592
Target Start/End: Complemental strand, 7750559 - 7750447
Alignment:
| Q |
480 |
tgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaactt |
579 |
Q |
| |
|
|||||| |||||||| ||||||||| | ||| ||||||||||| || |||| | ||||| ||||||||||||| ||| || ||||| ||||||||| |
|
|
| T |
7750559 |
tgtacccataatcagtatagtgggtgtgattgggatgggtaagacaaccattgcccgacttgtttacaacgaccacaagatacatgagcaatttgaactt |
7750460 |
T |
|
| Q |
580 |
aaagcttgggtct |
592 |
Q |
| |
|
||||||||||||| |
|
|
| T |
7750459 |
aaagcttgggtct |
7750447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 591
Target Start/End: Complemental strand, 6142842 - 6142732
Alignment:
| Q |
481 |
gtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaactta |
580 |
Q |
| |
|
||||| |||||||| ||||| ||||| ||| || |||||||| || ||||| ||| || | ||||| ||||||||||| |||||||| |||||||||| |
|
|
| T |
6142842 |
gtacccataatcagtatagtaggtcttcctgggataggtaagacaacccttgcgcagtttatttacaatgaccacaggatacaggagcaatttgaactta |
6142743 |
T |
|
| Q |
581 |
aagcttgggtc |
591 |
Q |
| |
|
| ||||||||| |
|
|
| T |
6142742 |
atgcttgggtc |
6142732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 482 - 591
Target Start/End: Complemental strand, 6266249 - 6266140
Alignment:
| Q |
482 |
taccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattttgaacttaa |
581 |
Q |
| |
|
|||| |||||||| ||||||||||| || || |||||||| | ||||| |||||||| ||||| ||||| ||||| |||||||| |||||| |||| |
|
|
| T |
6266249 |
tacccataatcagtatagtgggtctgacggggattggtaagacagcccttgcccagcttgtttacaatgaccataggatacaggagcagtttgaatttaa |
6266150 |
T |
|
| Q |
582 |
agcttgggtc |
591 |
Q |
| |
|
|||||||||| |
|
|
| T |
6266149 |
agcttgggtc |
6266140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 6736970 - 6736885
Alignment:
| Q |
44 |
attctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacat |
129 |
Q |
| |
|
||||||||||||| || | || ||||| ||||| ||||||||||||| || || |||||||||||||||||||| ||||||||| |
|
|
| T |
6736970 |
attctatcaaccaagtactagacgaagcagagataaagcagtaccaaaacaaatatgtgaagaagtggcttgatgaacttaaacat |
6736885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 466 - 591
Target Start/End: Complemental strand, 6900662 - 6900537
Alignment:
| Q |
466 |
gacagtggcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcagg |
565 |
Q |
| |
|
|||||| ||||||| ||||| |||||||| |||||||| | ||| ||||||||||| || || || |||||||| ||| | ||| ||| ||| || |
|
|
| T |
6900662 |
gacagtcgcaaccaagtacccataatcagtgtagtgggtgtgattgggatgggtaagacaaccctcgcccagcttgtttactatgacgacatgatcgtgg |
6900563 |
T |
|
| Q |
566 |
agcattttgaacttaaagcttgggtc |
591 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
6900562 |
agcattttgaaattaaagcttgggtc |
6900537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 6838145 - 6838222
Alignment:
| Q |
236 |
tttcatctttcactaatccatttgagtctaggattatagaattgctagagaagcttgaatttcttgcaaagcaaaagg |
313 |
Q |
| |
|
||||| || |||||||||||||||| |||||||| | ||| ||||||| ||||| ||| ||||||| ||||||||| |
|
|
| T |
6838145 |
tttcagctatcactaatccatttgaatctaggatcaaagagttgctaggcaagctaaaatatcttgcagagcaaaagg |
6838222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 373 - 591
Target Start/End: Original strand, 6572688 - 6572906
Alignment:
| Q |
373 |
agattgccaactacatctttggtggatgaattgagcatatatggtagagatggtgacaaggaggagttaatcaattttttactgtctgacatagacagtg |
472 |
Q |
| |
|
|||| ||||||| ||||| |||||||| ||| |||||||||||||||| ||||| || || || ||||||| ||| || || ||| ||||| | |
|
|
| T |
6572688 |
agatcgccaactgcatctctggtggataaatcttgcatatatggtagagagggtgagaaagaagaaataatcaaccatttgctttcatacaaagacaacg |
6572787 |
T |
|
| Q |
473 |
gcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcaggagcattt |
572 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| | ||||| ||||| |||||||| |||||||||||||| ||||| ||||| |||||| || | || || |
|
|
| T |
6572788 |
acaaccaagtatcaataatcagcatagtgggtttgggtgggatggggaagaccacccttgctcagcttgtctacaatgaccagaggatggagaaacagtt |
6572887 |
T |
|
| Q |
573 |
tgaacttaaagcttgggtc |
591 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
6572888 |
tgaccttaaagcttgggtc |
6572906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 466 - 592
Target Start/End: Original strand, 6960 - 7086
Alignment:
| Q |
466 |
gacagtggcaaccatgtaccaataatcagcatagtgggtctcggtggaatgggtaagaccactcttgctcagcttgtgtacaacgaccacaggatgcagg |
565 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||| | || || ||||| || ||||| |||||| ||||||||||||| ||| ||| ||| || |
|
|
| T |
6960 |
gacagtggcaaccaggttccaataatcagcatagtgggtttaggagggatggggaaaaccacccttgctaagcttgtgtacaaagacaacaagataaaga |
7059 |
T |
|
| Q |
566 |
agcattttgaacttaaagcttgggtct |
592 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
7060 |
agcattttgaacttaaagcatgggtct |
7086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 6526 - 6659
Alignment:
| Q |
44 |
attctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacattatgcatatgaggt |
143 |
Q |
| |
|
||||||||||||| || | || ||||| ||||| ||||||||||||| || || |||||||||||||||||||| ||||||||| || ||||||| |
|
|
| T |
6526 |
attctatcaaccaagtactagacgaagcagagataaagcagtaccaaaacaaatatgtgaagaagtggcttgatgaacttaaacatgttgtttatgaggc |
6625 |
T |
|
| Q |
144 |
tgaccagctgttagatgagattgcaactgatgca |
177 |
Q |
| |
|
||||| || |||||||||||| | ||||||||| |
|
|
| T |
6626 |
agaccaactattagatgagatttctactgatgca |
6659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 41068372 - 41068463
Alignment:
| Q |
38 |
cactcaattctatcaaccatgtgttggaagaagctgagatgaagcagtaccaaagcatgtacgtgaagaagtggcttgatgatcttaaacat |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| | | |||||||||||||| || |||||||| ||||||||||| ||||||||| |
|
|
| T |
41068372 |
cactcaattctatcaaccatgtgttggaagaagcagagctataacagtaccaaagcatatatgtgaagaattggcttgatgaacttaaacat |
41068463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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