View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9920_low_23 (Length: 291)
Name: NF9920_low_23
Description: NF9920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9920_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 14 - 284
Target Start/End: Complemental strand, 30320069 - 30319799
Alignment:
| Q |
14 |
atcaataccaagctaaagttcacaaatttatacataaatagccaccaaatattcatttatgatataccaatttaaacctcatccacacaaaaacaagatt |
113 |
Q |
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| T |
30320069 |
atcaataccaagctaaagttcacaaatttatacataaatagccaccaaatattcatttatgatataccaatttaaacctcatccacacaaaaacaagatt |
30319970 |
T |
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| Q |
114 |
accaactagccctttttcaaaaacataaacctaagactatgaagctcttgtctgttacaaaaccaaccatgatggttccttctcattgtctcatcttctc |
213 |
Q |
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| T |
30319969 |
accaactagccctttttcaaaaacataaacctaagactatgaagctcttgtctgttacaaaaccaaccatgatggttccttctcattgtctcatcttctc |
30319870 |
T |
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| Q |
214 |
tctcatttttgtttccattttagccaatgaagcaaccttgctccatgtaagtcctctctctttctctgctc |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30319869 |
tctcatttttgtttccattttagccaatgaagcaaccttgctccatgtaagtcctctctctttctctgctc |
30319799 |
T |
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