View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9920_low_38 (Length: 232)

Name: NF9920_low_38
Description: NF9920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9920_low_38
NF9920_low_38
[»] chr1 (51 HSPs)
chr1 (14-214)||(31166243-31166443)
chr1 (68-214)||(8224755-8224901)
chr1 (76-214)||(28632526-28632663)
chr1 (84-214)||(37036889-37037019)
chr1 (117-215)||(37447298-37447396)
chr1 (75-211)||(43622921-43623057)
chr1 (78-214)||(49659214-49659349)
chr1 (81-208)||(6470632-6470759)
chr1 (90-212)||(37448344-37448465)
chr1 (122-214)||(35491198-35491290)
chr1 (78-214)||(39887124-39887260)
chr1 (137-214)||(41822637-41822714)
chr1 (118-214)||(41822483-41822579)
chr1 (144-214)||(37447842-37447912)
chr1 (119-212)||(42230758-42230852)
chr1 (137-214)||(15467903-15467980)
chr1 (80-214)||(32287872-32288007)
chr1 (143-214)||(48953630-48953701)
chr1 (144-214)||(44570741-44570811)
chr1 (81-214)||(946376-946507)
chr1 (117-214)||(44571237-44571334)
chr1 (119-214)||(31195494-31195589)
chr1 (144-214)||(41823100-41823170)
chr1 (145-214)||(946977-947046)
chr1 (117-214)||(32128066-32128163)
chr1 (137-214)||(32647357-32647434)
chr1 (137-214)||(34003517-34003594)
chr1 (137-214)||(49216278-49216355)
chr1 (119-214)||(52135565-52135660)
chr1 (148-214)||(47820280-47820346)
chr1 (137-214)||(50471806-50471883)
chr1 (80-214)||(10166498-10166631)
chr1 (137-214)||(13181644-13181721)
chr1 (117-214)||(21267751-21267847)
chr1 (143-214)||(23956302-23956373)
chr1 (137-208)||(34003433-34003504)
chr1 (137-214)||(32201825-32201902)
chr1 (84-214)||(51847855-51847984)
chr1 (79-168)||(26501065-26501154)
chr1 (81-168)||(24273206-24273293)
chr1 (81-169)||(47165197-47165285)
chr1 (81-156)||(30190220-30190295)
chr1 (79-165)||(50005077-50005163)
chr1 (158-214)||(1902138-1902194)
chr1 (84-164)||(45565397-45565477)
chr1 (163-202)||(16325122-16325161)
chr1 (79-165)||(15034657-15034743)
chr1 (152-214)||(39589045-39589107)
chr1 (157-214)||(12087003-12087060)
chr1 (79-156)||(23536065-23536142)
chr1 (76-165)||(34756422-34756511)
[»] scaffold0169 (1 HSPs)
scaffold0169 (77-214)||(4071-4208)
[»] scaffold0400 (1 HSPs)
scaffold0400 (82-214)||(4438-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (82-214)||(5082-5214)
[»] chr3 (43 HSPs)
chr3 (79-214)||(7302344-7302479)
chr3 (81-214)||(48947605-48947738)
chr3 (78-214)||(53129782-53129918)
chr3 (76-214)||(42005892-42006030)
chr3 (136-214)||(46706707-46706785)
chr3 (81-214)||(36397928-36398061)
chr3 (81-214)||(47767432-47767565)
chr3 (78-214)||(34088568-34088704)
chr3 (85-214)||(21307471-21307600)
chr3 (117-214)||(38506815-38506912)
chr3 (81-214)||(53470368-53470501)
chr3 (75-214)||(47336875-47337014)
chr3 (137-214)||(2104790-2104867)
chr3 (117-214)||(35279861-35279956)
chr3 (81-214)||(37054394-37054527)
chr3 (78-214)||(671558-671694)
chr3 (95-214)||(30766567-30766686)
chr3 (147-214)||(30767171-30767238)
chr3 (111-214)||(47284142-47284245)
chr3 (77-214)||(7976543-7976681)
chr3 (116-214)||(26323391-26323489)
chr3 (148-214)||(43863890-43863956)
chr3 (84-214)||(52527039-52527169)
chr3 (137-214)||(31021735-31021813)
chr3 (78-214)||(21730899-21731034)
chr3 (159-214)||(26547093-26547148)
chr3 (99-210)||(50168553-50168664)
chr3 (137-214)||(6836998-6837075)
chr3 (81-214)||(31189336-31189469)
chr3 (149-214)||(55460408-55460473)
chr3 (137-214)||(34396449-34396523)
chr3 (171-215)||(1146882-1146926)
chr3 (77-165)||(44436254-44436342)
chr3 (162-214)||(46635927-46635979)
chr3 (89-168)||(19475824-19475903)
chr3 (79-156)||(9129428-9129505)
chr3 (79-156)||(9137535-9137612)
chr3 (75-156)||(44692906-44692987)
chr3 (171-214)||(32665975-32666018)
chr3 (152-214)||(46999809-46999871)
chr3 (137-178)||(9007430-9007471)
chr3 (75-128)||(46429508-46429561)
chr3 (77-129)||(49457339-49457391)
[»] chr7 (43 HSPs)
chr7 (73-214)||(23455173-23455314)
chr7 (79-214)||(25189152-25189287)
chr7 (81-214)||(28539094-28539227)
chr7 (79-214)||(39342568-39342703)
chr7 (81-214)||(23548537-23548670)
chr7 (117-214)||(30080727-30080824)
chr7 (85-214)||(30629061-30629190)
chr7 (82-214)||(9784857-9784989)
chr7 (78-214)||(14603188-14603324)
chr7 (83-214)||(22391514-22391644)
chr7 (117-214)||(13814920-13815017)
chr7 (117-214)||(32650609-32650706)
chr7 (81-214)||(35455804-35455937)
chr7 (137-214)||(45984396-45984473)
chr7 (137-214)||(45988756-45988833)
chr7 (119-214)||(40495755-40495850)
chr7 (137-214)||(40495286-40495363)
chr7 (119-215)||(43791128-43791224)
chr7 (111-214)||(19865480-19865583)
chr7 (119-214)||(40667379-40667474)
chr7 (136-214)||(42816604-42816682)
chr7 (137-214)||(3905585-3905662)
chr7 (137-214)||(26416009-26416086)
chr7 (117-214)||(30587829-30587926)
chr7 (81-197)||(18789189-18789305)
chr7 (79-214)||(30524253-30524388)
chr7 (147-214)||(36328722-36328789)
chr7 (142-214)||(41443026-41443098)
chr7 (123-214)||(18926747-18926839)
chr7 (117-214)||(14790149-14790246)
chr7 (137-197)||(18789573-18789633)
chr7 (152-214)||(33310875-33310937)
chr7 (137-214)||(15990947-15991024)
chr7 (78-168)||(35776927-35777017)
chr7 (81-168)||(26162109-26162196)
chr7 (78-165)||(31632719-31632806)
chr7 (136-214)||(45967002-45967080)
chr7 (79-168)||(29639187-29639276)
chr7 (81-168)||(6498737-6498824)
chr7 (78-165)||(5644674-5644761)
chr7 (79-165)||(29065817-29065903)
chr7 (137-214)||(5976501-5976577)
chr7 (79-164)||(40110735-40110820)
[»] chr8 (40 HSPs)
chr8 (78-214)||(33986001-33986137)
chr8 (111-214)||(26520389-26520492)
chr8 (100-214)||(9982655-9982769)
chr8 (81-214)||(24044960-24045093)
chr8 (81-214)||(29257301-29257434)
chr8 (77-214)||(33377247-33377384)
chr8 (117-214)||(34008817-34008914)
chr8 (79-214)||(1088227-1088362)
chr8 (83-214)||(29482757-29482888)
chr8 (137-214)||(31976532-31976609)
chr8 (85-214)||(44346628-44346757)
chr8 (81-214)||(44889354-44889487)
chr8 (137-214)||(6416240-6416317)
chr8 (137-214)||(13144639-13144716)
chr8 (81-214)||(28324612-28324745)
chr8 (118-214)||(24510227-24510323)
chr8 (77-212)||(14235-14369)
chr8 (119-214)||(8049292-8049387)
chr8 (83-214)||(15186767-15186898)
chr8 (143-214)||(34388569-34388640)
chr8 (111-214)||(36625175-36625278)
chr8 (137-214)||(31980433-31980510)
chr8 (150-214)||(40734051-40734115)
chr8 (117-196)||(29611406-29611485)
chr8 (119-214)||(7079369-7079463)
chr8 (84-214)||(35978957-35979084)
chr8 (137-214)||(43167676-43167753)
chr8 (147-213)||(8469563-8469629)
chr8 (155-214)||(10593145-10593204)
chr8 (137-214)||(35404692-35404769)
chr8 (137-186)||(28190681-28190730)
chr8 (77-168)||(36103097-36103188)
chr8 (172-214)||(6460836-6460878)
chr8 (137-214)||(15718253-15718330)
chr8 (79-168)||(23011732-23011821)
chr8 (153-206)||(24063754-24063807)
chr8 (81-165)||(3853616-3853700)
chr8 (81-165)||(3858074-3858158)
chr8 (117-168)||(30444929-30444980)
chr8 (79-129)||(14991690-14991740)
[»] scaffold0318 (1 HSPs)
scaffold0318 (81-214)||(2867-2999)
[»] chr6 (19 HSPs)
chr6 (78-215)||(28918162-28918299)
chr6 (81-215)||(1368477-1368611)
chr6 (120-214)||(31412940-31413034)
chr6 (137-214)||(1195389-1195466)
chr6 (119-214)||(8475199-8475294)
chr6 (136-214)||(15616301-15616379)
chr6 (103-214)||(6358191-6358302)
chr6 (137-214)||(9697518-9697595)
chr6 (160-214)||(10105118-10105172)
chr6 (152-214)||(29395459-29395521)
chr6 (137-214)||(26901704-26901781)
chr6 (75-168)||(34244966-34245059)
chr6 (136-214)||(413614-413692)
chr6 (137-191)||(15832522-15832576)
chr6 (75-168)||(29889420-29889513)
chr6 (147-205)||(10737668-10737726)
chr6 (119-168)||(34364781-34364830)
chr6 (75-111)||(6919836-6919872)
chr6 (81-165)||(9285647-9285731)
[»] chr5 (47 HSPs)
chr5 (77-214)||(41762152-41762289)
chr5 (117-214)||(33146209-33146306)
chr5 (116-215)||(37241046-37241145)
chr5 (137-214)||(9894259-9894336)
chr5 (81-214)||(22303807-22303940)
chr5 (78-214)||(927299-927434)
chr5 (137-214)||(10314705-10314782)
chr5 (137-214)||(14834880-14834957)
chr5 (117-214)||(15270791-15270888)
chr5 (117-214)||(22305130-22305227)
chr5 (117-214)||(34105107-34105204)
chr5 (118-214)||(17542298-17542394)
chr5 (79-214)||(32250035-32250169)
chr5 (120-214)||(17492585-17492679)
chr5 (117-211)||(28489499-28489593)
chr5 (137-214)||(12479963-12480040)
chr5 (81-210)||(22766952-22767081)
chr5 (120-204)||(28490031-28490115)
chr5 (151-214)||(22302592-22302655)
chr5 (137-214)||(35111282-35111359)
chr5 (81-214)||(35379344-35379475)
chr5 (78-184)||(40090381-40090487)
chr5 (137-214)||(30519060-30519136)
chr5 (137-214)||(30559400-30559476)
chr5 (150-214)||(17493102-17493166)
chr5 (159-214)||(37241535-37241590)
chr5 (145-214)||(6772150-6772219)
chr5 (158-214)||(8264585-8264641)
chr5 (111-206)||(12991276-12991370)
chr5 (143-214)||(31316223-31316294)
chr5 (78-168)||(25935273-25935363)
chr5 (82-195)||(37090282-37090395)
chr5 (75-168)||(37722877-37722970)
chr5 (169-214)||(40089754-40089799)
chr5 (147-214)||(17444367-17444435)
chr5 (111-206)||(13064899-13064993)
chr5 (137-214)||(11601095-11601171)
chr5 (83-168)||(19533890-19533975)
chr5 (83-168)||(37145484-37145569)
chr5 (178-214)||(9894089-9894125)
chr5 (149-208)||(8674420-8674478)
chr5 (171-214)||(11409271-11409314)
chr5 (117-168)||(12064451-12064502)
chr5 (82-165)||(20523208-20523291)
chr5 (119-185)||(8255065-8255130)
chr5 (75-111)||(2550322-2550358)
chr5 (77-129)||(40643928-40643980)
[»] chr2 (45 HSPs)
chr2 (78-215)||(17905651-17905787)
chr2 (78-214)||(33189197-33189333)
chr2 (79-214)||(769034-769169)
chr2 (79-214)||(7227952-7228087)
chr2 (111-214)||(8736381-8736484)
chr2 (81-214)||(1583749-1583882)
chr2 (81-214)||(45094411-45094544)
chr2 (79-214)||(11141303-11141438)
chr2 (119-214)||(32840132-32840227)
chr2 (121-214)||(44255674-44255767)
chr2 (81-215)||(13017779-13017913)
chr2 (137-214)||(7611828-7611905)
chr2 (117-214)||(20935742-20935839)
chr2 (78-214)||(3092279-3092415)
chr2 (115-214)||(12263460-12263559)
chr2 (75-214)||(35047619-35047758)
chr2 (84-214)||(28740599-28740729)
chr2 (137-214)||(7167607-7167684)
chr2 (137-214)||(7309703-7309780)
chr2 (117-214)||(21504486-21504583)
chr2 (89-214)||(30698289-30698414)
chr2 (143-214)||(6749219-6749290)
chr2 (119-214)||(32839588-32839683)
chr2 (79-214)||(39630223-39630357)
chr2 (101-214)||(740724-740837)
chr2 (118-214)||(1730090-1730185)
chr2 (119-214)||(41585630-41585725)
chr2 (78-214)||(2274729-2274864)
chr2 (82-194)||(30751308-30751418)
chr2 (167-214)||(11036428-11036475)
chr2 (151-214)||(14306747-14306810)
chr2 (119-210)||(44205602-44205693)
chr2 (78-168)||(10480116-10480206)
chr2 (79-165)||(27033488-27033574)
chr2 (119-209)||(40026102-40026192)
chr2 (81-165)||(41461590-41461674)
chr2 (83-168)||(11532239-11532324)
chr2 (83-168)||(11793897-11793982)
chr2 (79-156)||(17180295-17180372)
chr2 (137-214)||(28022044-28022119)
chr2 (80-156)||(14537198-14537274)
chr2 (87-214)||(29278957-29279086)
chr2 (119-164)||(11595357-11595402)
chr2 (79-156)||(14365698-14365775)
chr2 (158-210)||(36272422-36272474)
[»] chr4 (44 HSPs)
chr4 (79-214)||(42776635-42776770)
chr4 (111-214)||(56339163-56339266)
chr4 (80-214)||(10354341-10354475)
chr4 (81-214)||(2125857-2125990)
chr4 (81-214)||(35470122-35470255)
chr4 (137-214)||(46242484-46242561)
chr4 (117-214)||(53760730-53760827)
chr4 (119-214)||(29091175-29091270)
chr4 (117-214)||(42775641-42775738)
chr4 (111-214)||(40338192-40338295)
chr4 (81-214)||(16516171-16516305)
chr4 (117-214)||(17727101-17727198)
chr4 (145-214)||(31947655-31947724)
chr4 (117-214)||(46243037-46243132)
chr4 (79-214)||(41139473-41139606)
chr4 (119-214)||(40548158-40548253)
chr4 (148-214)||(42776183-42776249)
chr4 (117-214)||(27284602-27284699)
chr4 (137-213)||(52294986-52295062)
chr4 (89-194)||(1539649-1539754)
chr4 (117-214)||(56118570-56118667)
chr4 (119-214)||(26534531-26534626)
chr4 (117-214)||(4490068-4490160)
chr4 (149-214)||(13318599-13318664)
chr4 (79-214)||(52493924-52494056)
chr4 (74-152)||(5715737-5715815)
chr4 (119-214)||(16300158-16300254)
chr4 (150-214)||(24062840-24062904)
chr4 (142-214)||(47108342-47108413)
chr4 (119-213)||(19461677-19461771)
chr4 (162-214)||(24705432-24705484)
chr4 (150-214)||(29686016-29686080)
chr4 (118-164)||(21012566-21012612)
chr4 (160-214)||(30303800-30303854)
chr4 (75-156)||(26250903-26250984)
chr4 (84-168)||(10633035-10633119)
chr4 (81-165)||(15660258-15660342)
chr4 (158-214)||(54566252-54566308)
chr4 (87-214)||(9451072-9451199)
chr4 (81-168)||(31473849-31473936)
chr4 (81-156)||(49111396-49111471)
chr4 (75-165)||(10128049-10128139)
chr4 (81-111)||(56339151-56339181)
chr4 (158-214)||(30303172-30303228)
[»] scaffold0129 (2 HSPs)
scaffold0129 (76-208)||(19193-19324)
scaffold0129 (83-214)||(19725-19855)
[»] scaffold0301 (1 HSPs)
scaffold0301 (83-214)||(7153-7284)
[»] scaffold0065 (2 HSPs)
scaffold0065 (123-214)||(9526-9617)
scaffold0065 (147-212)||(2850-2915)
[»] scaffold0337 (2 HSPs)
scaffold0337 (147-212)||(15808-15873)
scaffold0337 (137-214)||(16314-16391)
[»] scaffold0039 (1 HSPs)
scaffold0039 (117-214)||(109067-109163)
[»] scaffold0047 (1 HSPs)
scaffold0047 (137-211)||(50250-50324)
[»] scaffold0014 (2 HSPs)
scaffold0014 (137-214)||(221136-221213)
scaffold0014 (148-214)||(223689-223755)
[»] scaffold0417 (1 HSPs)
scaffold0417 (144-214)||(11896-11966)


Alignment Details
Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 31166243 - 31166443
Alignment:
Q  14 caaaggaaaaggactcggaaaaaagtaaactcatgccccaaataagcaaaacaaaacatacaccctaagagtgtgtttggatgatggaatgttttgagat 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  31166243 caaaggaaaaggactcggaaaaaagtaaaatcatgccccaaataagcaaaacaaaacatacaccttaagagtgtgtttggatgagggaatgttttgagat 31166342  T
Q  114 gatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatt 213  Q
     ||| ||||||||||   |||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31166343 aatgtaatgttttgatggaatgcaaatattttgagatgaattctattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagtatt 31166442  T
Q  214 t 214  Q
    |    
T  31166443 t 31166443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 8224755 - 8224901
Alignment:
Q  68 aacatacaccctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttgga 167  Q
    |||||| ||||||||||||||||||||||| |||||||||||||   ||| |||||||||||  |||  ||||| ||||| |||||||||||||||||||    
T  8224755 aacatataccctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattccattgtttgga 8224854  T
Q  168 taataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||    
T  8224855 tgataatttaaagaattttcaaaatgatggaaatttatgaagtattt 8224901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 28632663 - 28632526
Alignment:
Q  76 ccctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatt 175  Q
    |||||| ||||||||||||||| ||||||||| |||   ||| |||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||    
T  28632663 ccctaatagtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaat-tcaatactttgaggtgaattccattgtttggataataatt 28632565  T
Q  176 tgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    | ||||||||||||||||||| |||||||||||||||||    
T  28632564 taaagaattttcaaaatgatgaaaatttatgaagtattt 28632526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 37037019 - 37036889
Alignment:
Q  84 gtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaat 183  Q
    |||||||||||||| |||||||||||||   ||| |||||||||||  |||  ||||||||||| || |||||||||||| |||||||||||||||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttgatgtaaattccattgttcggataataatttgaagaat 37036920  T
Q  184 tttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||| ||||||||||||||||||    
T  37036919 tttcaaaatgatagaaatttatgaagtattt 37036889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 117 - 215
Target Start/End: Complemental strand, 37447396 - 37447298
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttg 215  Q
    |||||||||||||| |||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37447396 ggaatgttttgagagaattcaaatactttgatgtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttg 37447298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 43623057 - 43622921
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataat 174  Q
    ||||||||||||||||||||||  ||||||||||||    ||| |||||||||||| ||| |||||| ||||||||||||| |||| |||| ||||||||    
T  43623057 accctaagagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtgaatttcattatttgaataataat 43622958  T
Q  175 ttgaagaattttcaaaatgatggaaatttatgaagta 211  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  43622957 ttgaagaattttcaaaatgatgaaaatttacgaagta 43622921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 49659214 - 49659349
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  ||||||| |||||   ||| ||||||  |||  ||| |||||| |||||||||||||||||||||||||||||||||||    
T  49659214 ctaagagtgtgtttggatgg-ggaatgtattgagggaatgtaatgttacgagggaatttaaatactttgaggtgaattccattgtttggataataatttg 49659312  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||| ||||||||||||||||    
T  49659313 aagaattttcaaaatgatggtaatttatgaagtattt 49659349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 6470759 - 6470632
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  ||||||||||||||  ||| |||||||||||  |||  ||||  ||||||||| ||||||||||||| ||||||||||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattccattgtttgaataataatttgaag 6470660  T
Q  181 aattttcaaaatgatggaaatttatgaa 208  Q
    ||||||||||||||||||||||||||||    
T  6470659 aattttcaaaatgatggaaatttatgaa 6470632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 37448465 - 37448344
Alignment:
Q  90 ttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaa 189  Q
    |||||||| ||||||||||||||  ||| |||||||||||  ||| |||||| ||||| |||||||||||||||||||| |||||||| |||||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaattccattgtttggat-ataatttggagaattttcaa 37448367  T
Q  190 aatgatggaaatttatgaagtat 212  Q
    |||||||||||||||||||||||    
T  37448366 aatgatggaaatttatgaagtat 37448344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 35491198 - 35491290
Alignment:
Q  122 gttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||| ||| ||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35491198 gttttgagagaatttaaatattttgatatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 35491290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 39887124 - 39887260
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||| ||||| |||||||||| ||   ||   |||||||||   |||  ||||| ||||| |||||||||||||||||||||||||||||    
T  39887124 ctaagagtgtgtttagatgagggaatgttttaagggaatatgatgttttgaagaaattcaaatactttgatgtgaattccattgtttggataataatttg 39887223  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||||||||    
T  39887224 aagaattttcaaaatgatggaaatttatgaagtattt 39887260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 41822714 - 41822637
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41822714 aaatactttgagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 41822637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 41822579 - 41822483
Alignment:
Q  118 gaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||  |||  ||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41822579 gaatgttttgagggaattcaaatactttaagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 41822483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 37447912 - 37447842
Alignment:
Q  144 ttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37447912 ttgaggtgaattccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattt 37447842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 42230758 - 42230852
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataa-tttgaagaattttcaaaatgatggaaatttatgaagtat 212  Q
    ||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  42230758 aatgttttgaggtaatttaaatattttgaagtgaatttcattgtttggataataattttgaagaatttttaaaatgatggaaatttatgaagtat 42230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 15467980 - 15467903
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15467980 aaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattt 15467903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 214
Target Start/End: Complemental strand, 32288007 - 32287872
Alignment:
Q  80 aagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccatt-gtttggataataatttga 178  Q
    |||||||||||||||||  |||| ||||||||   ||| |||||||||||  |||  ||||| ||||| ||||| |||||| ||||||||||||||||||    
T  32288007 aagagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttgaagtgaaatccattagtttggataataatttga 32287908  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| ||||||||||||||||||| ||||||||    
T  32287907 agaatttccaaaatgatggaaatttataaagtattt 32287872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 48953630 - 48953701
Alignment:
Q  143 tttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48953630 tttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatggatatttatgaagtattt 48953701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 44570741 - 44570811
Alignment:
Q  144 ttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  44570741 ttgaggtgaattccattgtttggataatagtttgaagaattttcgaaatgatggaaatttatgaagtattt 44570811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 946376 - 946507
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||| | |||| ||||||   ||| | |||||||||  ||| |||||| |||| | ||||||| |||||||||||||||||||||||    
T  946376 agagtgtgtttggatga-gaaatgctttgagggaatgtattgttttgagggaatttaaatactttg-gatgaattctattgtttggataataatttgaag 946473  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  946474 cattttcaaaatgatggaaatttatgaagtattt 946507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 44571237 - 44571334
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  44571237 ggaatgttttgagggaattcaaatactttgaagtgaattccattgtttggataataatttaaagaatttttaaaatgatggaaatttataaagtattt 44571334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 31195494 - 31195589
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||| |||||||||    
T  31195494 aatgttctgaggaaatttaaatattttgaggtgaattccattgtttgtataataatttgaagaatttttaaaatgataaaaatttacgaagtattt 31195589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 41823170 - 41823100
Alignment:
Q  144 ttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  41823170 ttgagatgaattccattgtttggataatagtttgaagaattttcaaaataatggaaatttatgaagtattt 41823100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 946977 - 947046
Alignment:
Q  145 tgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  946977 tgaggtgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaaatattt 947046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 32128066 - 32128163
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| |||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  32128066 ggaatgttttgagggaattcaaatactttgtggtgaattccattgttttaataataatttgaagaattttcaaaatgatgggaatttatgaggtattt 32128163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 32647357 - 32647434
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32647357 aaatactttggggtgaataccattgtttggatattaatttgaagcattttcaaaatgatggaaatttatgaagtattt 32647434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 34003517 - 34003594
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| |||||    
T  34003517 aaatactttgaggtgaattccattgtttggatgataatttgatgaattatcaaaatgatggaaatttatgaaatattt 34003594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 49216355 - 49216278
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49216355 aaatactttgaggtaaatttcattgttgggataataatttaaagaattttcaaaatgatggaaatttatgaagtattt 49216278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 52135660 - 52135565
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||||||| |||| ||||  ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  52135660 aatgttttgagggaattcaaatatttttaggtaaattttattgtttggatgataatttgaagaatttttaaaatgatggaaatttatgaagtattt 52135565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 47820280 - 47820346
Alignment:
Q  148 ggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  47820280 ggtgaatttcattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattt 47820346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 50471806 - 50471883
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||| |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  50471806 aaatactttcaggtgaattttattgtttggataataatttaaagaattttcaaaatgatggaaatttttgaagtattt 50471883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 214
Target Start/End: Original strand, 10166498 - 10166631
Alignment:
Q  80 aagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaa 179  Q
    ||||||||||||||||||  |||||||||| | | ||| ||||||||||   ||   |||||| || ||||||||| ||||||||| || |||||||| |    
T  10166498 aagagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaactcaaatatatttaggtgaatttcattgtttgaatgataatttgga 10166597  T
Q  180 gaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||| ||| ||||||||||||||||||    
T  10166598 gaattttcaaaacgat-gaaatttatgaagtattt 10166631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 13181644 - 13181721
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||| | ||||  ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13181644 aaatactttgagattaattatattttttggataataatttgaagaatattcaaaatgatggaaatttatgaagtattt 13181721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 21267847 - 21267751
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||  ||| | |||| |||||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  21267847 ggaatattttgagggaatttgaatactttgagataaatttcattgtttggataataatttgaagaattttcaaaatgatgg-aatttatgaagaattt 21267751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 23956373 - 23956302
Alignment:
Q  143 tttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||| |||||||||||| |||||||||| |||| |||| ||||||||||||||| ||||||||    
T  23956373 tttgaggtgaatttcattgtttggattataatttgaaaaattatcaatatgatggaaatttataaagtattt 23956302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 34003433 - 34003504
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 208  Q
    ||||| |||||||||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||||||    
T  34003433 aaatactttgaggtgaattccattatttggatgataatttgatgaattttcaaaatgagagaaatttatgaa 34003504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 32201825 - 32201902
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataa-taatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| ||||||||||    
T  32201825 aaatgttttaaggtgaattccattgtttggataattaatttgaagaattttcaaaatgattggaattt-tgaagtattt 32201902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 51847855 - 51847984
Alignment:
Q  84 gtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaat 183  Q
    |||||||||||||  ||||||||||||| | ||| |||||||| |   |||  ||||| ||| ||||||||||||| |||||||| |||||||| |||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgttttaaagaaattcaaatacttt-aggtgaattccatcgtttggatgataatttggagaat 51847953  T
Q  184 tttcaaaatgatggaaatttatgaagtattt 214  Q
     || | |||||||||||||||| ||||||||    
T  51847954 attaagaatgatggaaatttatcaagtattt 51847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 26501154 - 26501065
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  ||||| ||||| ||||||||||||||||||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattccattgtttggat 26501065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 24273293 - 24273206
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||||  |||||||||||||   ||| |||||| ||||  |||  ||||| ||||||||||||||||||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 24273206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 47165285 - 47165197
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggata 169  Q
    ||||||||||||||||  | |||||||||||   ||| |||||||||||  |||  ||||| ||| |||||||||||||||||||||||    
T  47165285 agagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtgaattccattgtttggata 47165197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 30190295 - 30190220
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||  |||||||||||||   ||| ||||||||||| ||||  || |||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaattc 30190220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 50005077 - 50005163
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||||| ||||| ||||||||  ||| |||||||||||  |||  || |  |||||||||||||| ||||||||    
T  50005077 taagagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttg 50005163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 1902138 - 1902194
Alignment:
Q  158 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| |||||||  |||||||| ||||||||||||||| |||| ||||||    
T  1902138 attgtttggatgataatttagagaatttttaaaatgatggaaattcatgaggtattt 1902194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 45565397 - 45565477
Alignment:
Q  84 gtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgttt 164  Q
    |||||||||||||  ||||||||||||||  ||| |||||||||||  |||  || |||||| |||||||||| |||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgttt 45565477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 16325122 - 16325161
Alignment:
Q  163 ttggataataatttgaagaattttcaaaatgatggaaatt 202  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  16325122 ttggatgataatttgaagaatttttaaaatgatggaaatt 16325161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 15034657 - 15034743
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || ||| |||||||||| ||||||||    
T  15034657 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 15034743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 39589107 - 39589045
Alignment:
Q  152 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||  | | || | ||||||||  |||||||||||||||||    
T  39589107 aattccattgtttggataataatttagacatttcttaaaatgataaaaatttatgaagtattt 39589045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 12087060 - 12087003
Alignment:
Q  157 cattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||| ||||  || |||||||||||||||| | ||||||||||| |||||    
T  12087060 cattgtttggatgataacatggagaattttcaaaatgacgaaaatttatgaaatattt 12087003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 23536065 - 23536142
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || ||||||||||||||    
T  23536065 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 23536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 34756422 - 34756511
Alignment:
Q  76 ccctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    |||| |||| |||||||||||  |||||||||||||   ||| |||||||||||  |||  || || |||||||||||||| ||||||||    
T  34756422 cccttagagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 34756511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 4071 - 4208
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataattt 176  Q
    ||||||||||||||||||| | ||||||||||||||  ||| |||||||||||  |||  ||||| |||||||||||||| |||||||||||||||||||    
T  4071 cctaagagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattctattgtttggataataattt 4170  T
Q  177 gaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4171 gaagaattttcaaaatgatggaaatttatgaagtattt 4208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 4570 - 4438
Alignment:
Q  82 gagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaaga 181  Q
    |||||||||||||||| |||||||||||||   ||  |||||||||||  |||  |||||||||| |||||||||||||||||||||||||||||||||     
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagc 4471  T
Q  182 attttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||||    
T  4470 attttcaaaatgatggaaatttatgaagtattt 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 5214 - 5082
Alignment:
Q  82 gagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaaga 181  Q
    |||||||||||||||| |||||||||||||   ||  |||||||||||  |||  |||||||||| |||||||||||||||||||||||||||||||||     
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttggataataatttgaagc 5115  T
Q  182 attttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||||    
T  5114 attttcaaaatgatggaaatttatgaagtattt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 7302344 - 7302479
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||| ||||||||||||||  ||| ||||||||||   |||  | |||  ||||||||||||||||||||||||||||| |||||    
T  7302344 taagagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattcagataccttgaggtgaattccattgtttggataatagtttga 7302443  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||||    
T  7302444 agaattttcaaaatgatggaaatttatgaagtattt 7302479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 48947605 - 48947738
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||   ||||||||||||   ||| | |||||||||| |||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  48947605 agagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtgaattccattgtttggataataatttgaag 48947704  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  48947705 cattttcaaaatgatggaaatttatgaagtattt 48947738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 53129918 - 53129782
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||| ||||||||| |||   ||| |||||||| ||  |||  ||||| |||| ||||||||||||||||||||||||||||||    
T  53129918 ctaagagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttg 53129819  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| ||||||||||||||| |||||||||||||||||    
T  53129818 aagtattttcaaaatgatgaaaatttatgaagtattt 53129782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 42006030 - 42005892
Alignment:
Q  76 ccctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatt 175  Q
    |||||||||||||||||||||  |||||||||||||   ||| ||||||||||   ||| ||||||  |||||||||||| |||||||||| ||||| ||    
T  42006030 ccctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatttaaataccttgaggtgaatttcattgtttgggtaatagtt 42005931  T
Q  176 tgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  42005930 tgaagaattttcaaaatgatgaaaatttatgaagtattt 42005892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 46706707 - 46706785
Alignment:
Q  136 taaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46706707 taaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 46706785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 36398061 - 36397928
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| | |||||||||  |||  ||||| |||| |||||||||||||||| ||||||||||||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgttcggataataatttgaag 36397962  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  36397961 cattttcaaaatgatggaaatttatgaagtattt 36397928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 47767432 - 47767565
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| ||||||||||   |||  |||||  |||||||||||| |||||||||||||||| |||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattacattgtttggataatagtttgaag 47767531  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||    
T  47767532 aattttcaaaatgatggaaatttatgaagtattt 47767565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 34088568 - 34088704
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  | |||||||||||   ||| | |||||||||  |||  ||||| |||| |||||||||||||||| |||||||||||||    
T  34088568 ctaagagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgttaggataataatttg 34088667  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| |||||||||||||||||||||||||||||||||    
T  34088668 aagcattttcaaaatgatggaaatttatgaagtattt 34088704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 21307600 - 21307471
Alignment:
Q  85 tgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaatt 184  Q
    ||||||||||||  ||||||||||| |   ||| |||||||||||  |||  ||||| ||||||||||||||||||||||||||||||||||| | ||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgtaaaatt 21307501  T
Q  185 ttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| ||||||||||||||||||    
T  21307500 ttcaaaatgatagaaatttatgaagtattt 21307471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 38506912 - 38506815
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38506912 ggaatgttttgagggaattcaaataatttgaggtgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttataaagtattt 38506815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 53470501 - 53470368
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||| | |||||||||||   ||  | |||||||||  |||  ||||| |||| |||||||| ||||||||||||||||||||||||    
T  53470501 agagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtgaatttcattgtttggataataatttgaag 53470402  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  53470401 cattttcaaaatgatggaaatttatgaagtattt 53470368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 47336875 - 47337014
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataat 174  Q
    ||||||| | ||||| ||||||  | |||||||| || | ||| |||||||||||||||| ||||||| || |||||||||||||||||||||| |||||    
T  47336875 accctaaaaatgtgtgtggatggggaaatgttttaaggtaatgtaatgttttgagataatttaaatatgtttaggtgaattccattgtttggatgataat 47336974  T
Q  175 ttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||  |||||||| |||||||| ||||||||||||||||||    
T  47336975 ttatagaattttaaaaatgatagaaatttatgaagtattt 47337014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 2104790 - 2104867
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2104790 aaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 2104867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 35279956 - 35279861
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  ||||||| | ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35279956 ggaatgttttgagggaatgtaa-tgttttgag-tgaattacattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 35279861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 37054394 - 37054527
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||| ||   ||| ||||||||||   |||  |||||  |||||||||||| |||||||||| ||||| |||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaag 37054493  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||    
T  37054494 aattttcaaaatgatggaaatttatgaagtattt 37054527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 671694 - 671558
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||| |||||||   |||||||||||||   ||| | |||||||||  |||  | ||| |||| ||||||||||||||||||| ||||||||||    
T  671694 ctaagagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattcagatactttggggtgaattccattgtttgggtaataatttg 671595  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| |||||||||||||||||||||||||||||||||    
T  671594 aagcattttcaaaatgatggaaatttatgaagtattt 671558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 214
Target Start/End: Original strand, 30766567 - 30766686
Alignment:
Q  95 tgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatga 194  Q
    |||||||||||||||||   ||| ||||||||||   |||  |||||  ||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  30766567 tgatggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaaaga 30766666  T
Q  195 tggaaatttatgaagtattt 214  Q
    | ||||||||||||||||||    
T  30766667 tagaaatttatgaagtattt 30766686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 30767171 - 30767238
Alignment:
Q  147 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30767171 aggtgaattccattgtttgggtaataatttgaagaattttcaaaatgatggaaatttatgaagtattt 30767238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 47284245 - 47284142
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    ||||| ||||| |||||||  |||  ||||| |||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47284245 gatgagggaatattttgagggaattcaaatactttgatatgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagt 47284146  T
Q  211 attt 214  Q
    ||||    
T  47284145 attt 47284142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 7976543 - 7976681
Alignment:
Q  77 cctaagagtgtgtttg-gatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatt 175  Q
    |||||||||||||||  |||||  |||||||||||    ||| ||||||||||   ||| ||||||  ||||||||||||| ||||||||||||||||||    
T  7976543 cctaagagtgtgttttagatgagagaatgttttgaaggaatgtaatgttttgaaggaatttaaatacattgaggtgaattctattgtttggataataatt 7976642  T
Q  176 tgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    | ||||||||| |||||||||||||||||||||||||||    
T  7976643 taaagaatttttaaaatgatggaaatttatgaagtattt 7976681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 26323391 - 26323489
Alignment:
Q  116 tggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||| ||||  ||||| ||| ||||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  26323391 tggaatgttttgaggtaattcaaatacttttaggtgaattccgttgtttggataataatttataggattttcaaaatgatggaaatttatgaagtattt 26323489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 43863956 - 43863890
Alignment:
Q  148 ggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43863956 ggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattt 43863890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 52527039 - 52527169
Alignment:
Q  84 gtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaat 183  Q
    |||||||||||||  ||||||||||||   |||| |||||| ||    |||  ||||| |||||||| ||||||||||||||| | ||||||||||||||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgttatggaggaattcaaatactttgaggtaaattccattgtttggttgataatttgaagaat 52527138  T
Q  184 tttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||| |||||||||||||||||||||    
T  52527139 tttcaaaataatggaaatttatgaagtattt 52527169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 31021735 - 31021813
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaa-ttttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31021735 aaatactttgatgtgaattctattgtttgcataataatttgaagaatttttcaaaatgatggaaatttatgaagtattt 31021813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 21730899 - 21731034
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||| |||||||  | || | ||| ||||||||||   |||  |||||||| ||| |||||| ||||||||| ||||||||||     
T  21730899 ctaagagtgtgtttggatgagggaatgtcctaaggttatgtaatgttttgaaggaattcaaatattt-gagatgaatttcattgtttgaataataattta 21730997  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    || |||||| ||||||||||||||||||||| |||||    
T  21730998 aacaatttttaaaatgatggaaatttatgaactattt 21731034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 26547093 - 26547148
Alignment:
Q  159 ttgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26547093 ttgttcggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 26547148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 210
Target Start/End: Complemental strand, 50168664 - 50168553
Alignment:
Q  99 ggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgga 198  Q
    ||||||||||||| | ||| |||||||||||  ||   ||||| ||| || ||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  50168664 ggaatgttttgaggtaatgtaatgttttgaggaaactcaaataattttagctgaattccattgtttggataataatatggagaattttcaaaaggatgga 50168565  T
Q  199 aatttatgaagt 210  Q
    |||| |||||||    
T  50168564 aattaatgaagt 50168553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 6837075 - 6836998
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||| |||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  6837075 aaatagtttgagttgaaattcattgtttgaataataatttgaagaattttcaaaatgatagaaatttatgaagcattt 6836998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 31189469 - 31189336
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    |||||||||||| ||||  |||||||||||| | ||| |||||||||||| |||  ||||| |||||||| ||||  || |||||| | ||||||| ||     
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggtaaattttatcgtttgggtgataatttaaat 31189370  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| || |||||||||| |||||||||||||    
T  31189369 aatttttaagatgatggaaacttatgaagtattt 31189336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 55460408 - 55460473
Alignment:
Q  149 gtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| |||||||| |||||| | |||||||||||||||||||||||||| |||||||||    
T  55460408 gtgaattccatcgtttggatgataattaggagaattttcaaaatgatggaaatttacgaagtattt 55460473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 34396523 - 34396449
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||| |||| |||| ||||||| ||||||||||||   ||||||||||||| ||||||||||||||||    
T  34396523 aaatactttgaggtaaatttcattctttggatgataatttgaaga---ttcaaaatgatgggaatttatgaagtattt 34396449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 1146926 - 1146882
Alignment:
Q  171 taatttgaagaattttcaaaatgatggaaatttatgaagtatttg 215  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  1146926 taatttgaagaattttcaaaatgatagatatttatgaagtatttg 1146882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 44436254 - 44436342
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || |||||| |||||||||| ||||||||    
T  44436254 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttg 44436342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 46635927 - 46635979
Alignment:
Q  162 tttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||| ||||    
T  46635927 tttgaataataatttggagaattttcaaaatgatgaaaatttatgaagcattt 46635979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 168
Target Start/End: Original strand, 19475824 - 19475903
Alignment:
Q  89 tttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||  |||||||||||||   ||| |||||| |||| ||||  ||||| ||||||||||||||||||||||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattccattgtttggat 19475903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 9129505 - 9129428
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||||| |||||||||||||   ||| |||||||||||  |||  || || ||||||||||||||    
T  9129505 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 9129428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 9137612 - 9137535
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||||| |||||||||||||   ||| |||||||||||  |||  || || ||||||||||||||    
T  9137612 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 9137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 44692987 - 44692906
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || ||||||||||||||    
T  44692987 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 44692906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 32665975 - 32666018
Alignment:
Q  171 taatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||| |||||| || |||||||||||||||||    
T  32665975 taatttgaagaatttttaaaatgctgaaaatttatgaagtattt 32666018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 46999809 - 46999871
Alignment:
Q  152 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| |||||||||||| |||||||| |||||||| ||||| ||  ||||||||||| |||||    
T  46999809 aattacattgtttggatgataatttggagaattttaaaaataataaaaatttatgaattattt 46999871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 9007471 - 9007430
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||    
T  9007471 aaatacttttaggtgaatttcattgtttggataataatttga 9007430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 46429561 - 46429508
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttga 128  Q
    ||||| ||||||||||||||||| ||||| ||||||| | ||| ||||||||||    
T  46429561 acccttagagtgtgtttggatgagggaatattttgaggtaatgtaatgttttga 46429508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 49457339 - 49457391
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgag 129  Q
    ||||||||||||||||||||  |||||||||||||   ||| |||||||||||    
T  49457339 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 49457391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 73 - 214
Target Start/End: Complemental strand, 23455314 - 23455173
Alignment:
Q  73 acaccctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataata 172  Q
    ||||||| ||| ||||||||||||| |||||||||||||   ||| | |||||||||  |||  ||||| |||| |||||||||||||||||||||||||    
T  23455314 acacccttagaatgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataata 23455215  T
Q  173 atttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  23455214 atttgaagcattttcaaaatgatggaaatttatgaagtattt 23455173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 25189287 - 25189152
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  ||||||||||||| | ||| |||||||||||  |||  ||||| ||||| ||||||| |||||||||||| |||||||||    
T  25189287 taagagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttgaagtgaatttcattgtttggatgataatttga 25189188  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||| |||||||||    
T  25189187 agaattttcaaaatgatggaaatttacgaagtattt 25189152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 28539227 - 28539094
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| | |||||||||  |||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 28539128  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  28539127 cattttcaaaatgatggaaatttatgaagtattt 28539094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 39342703 - 39342568
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| |||||||||||||||||||||||||||||||    
T  39342703 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttga 39342604  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    || |||||||||||||||||||||||||||||||||    
T  39342603 agcattttcaaaatgatggaaatttatgaagtattt 39342568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 23548670 - 23548537
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| | |||||||||  |||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtgaattccattgtttggataataatttgaag 23548571  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||| ||||||||||||||||||    
T  23548570 cattttcaaaatgatagaaatttatgaagtattt 23548537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 30080824 - 30080727
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  ||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  30080824 ggaatgttttgaggaaatttaaatactttcaggtgaattccattgtttggatgataatttgaagaattttcaaaatgatggaaatttatgaagtattt 30080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 30629061 - 30629190
Alignment:
Q  85 tgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaatt 184  Q
    ||||||||||||  |||||||||||||   ||| | |||||| ||| ||| |||||| |||| |||||||| |||||||||||||||||||||||| |||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagagaatttaaatactttggggtgaatttcattgtttggataataatttgaaggatt 30629160  T
Q  185 ttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||    
T  30629161 ttcaaaatgatggaaatttatgaagtattt 30629190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 9784989 - 9784857
Alignment:
Q  82 gagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaaga 181  Q
    |||||||||||||||  |||||||||||||   ||| | |||||||||  |||  ||||| |||| |||||| ||||||||||||||||||||||||||     
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaaatccattgtttggataataatttgaagc 9784890  T
Q  182 attttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||||    
T  9784889 attttcaaaatgatggaaatttatgaagtattt 9784857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 14603324 - 14603188
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| ||| ||||||||||||||||||||||||||    
T  14603324 ctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttggataataatttg 14603225  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| |||||||||||||||||||||||||||||||||    
T  14603224 aagcattttcaaaatgatggaaatttatgaagtattt 14603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 22391644 - 22391514
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaa 182  Q
    |||||||||| ||||   |||||||||||   ||| |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |||||    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatttaaatattttgaggtgaatttcattgtttggataataatttaaagaa 22391545  T
Q  183 ttttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| |||||||||||||||| ||||||||||    
T  22391544 tttt-aaaatgatggaaatttctgaagtattt 22391514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 13815017 - 13814920
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13815017 ggaatgttttgagggaattcaaatactttgatgtgaattccattatttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 13814920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 32650609 - 32650706
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32650609 ggaatgttttgagggaattcaaatactttgaggtgaattttattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 32650706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 35455804 - 35455937
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| ||| |||||||||||||||||||||||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttggataataatttgaag 35455903  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  35455904 cattttcaaaatgatggaaatttatgaagtattt 35455937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 45984396 - 45984473
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45984396 aaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 45984473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 45988756 - 45988833
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45988756 aaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 45988833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 40495755 - 40495850
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  |||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  40495755 aatgttttgagggaattcaaatattttggggtgaattccattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattt 40495850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 40495286 - 40495363
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40495286 aaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 40495363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 43791128 - 43791224
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttg 215  Q
    |||||||||||  |||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  43791128 aatgttttgagggaattcaaatactttgaggtgaactccattgtttggataataatttgaagaattttcaaaatgatggaaatttaataagtatttg 43791224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 19865583 - 19865480
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    ||||| |||||||||||||  |||  ||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||||    
T  19865583 gatgagggaatgttttgaggaaattcaaatactttgaggtgaatttcattgttttgataataatttaaagaattttcaaaatgatggtaatttatgaagt 19865484  T
Q  211 attt 214  Q
    ||||    
T  19865483 attt 19865480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 40667379 - 40667474
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  ||| |||||| |||| | |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40667379 aatgttttgagggaatttaaatactttgggatgaatttcattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattt 40667474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 42816604 - 42816682
Alignment:
Q  136 taaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  42816604 taaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatgaaaatttatgaagtattt 42816682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 3905662 - 3905585
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  3905662 aaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaattattt 3905585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 26416009 - 26416086
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26416009 aaatactttgaggtgaatttcatggtttggataataatttgaagaattttcaaaatgatggaaatttaggaagtattt 26416086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 30587926 - 30587829
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| ||| | |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  30587926 ggaatgttttgagggaattcaaatactttaatgtgaattccattgtttggataatagtttgaagtattttcaaaatgatggaaatttatgaagtattt 30587829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 18789305 - 18789189
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  ||||| ||||||||  ||  |||||| ||||  |||  ||||| ||| ||||||||||||||||||||||||||||||||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatactttaaggtgaattccattgtttggataataatttgaag 18789206  T
Q  181 aattttcaaaatgatgg 197  Q
    |||||||||||||||||    
T  18789205 aattttcaaaatgatgg 18789189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 30524253 - 30524388
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||| ||||||  | ||||||||||    ||| |||||||||||  |||  ||||| |||| | |||||| ||||||||||||||||||||||    
T  30524253 taagagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaaatactttgggatgaatttcattgtttggataataatttga 30524352  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |  ||||| |||||||||||||||||||||||||||    
T  30524353 aatatttttaaaatgatggaaatttatgaagtattt 30524388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 36328789 - 36328722
Alignment:
Q  147 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36328789 aggtgaattctattatttggataataatttgaagaattttcaaaatgatggtaatttatgaagtattt 36328722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 41443098 - 41443026
Alignment:
Q  142 ttttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41443098 ttttgatgtgaattatattctttggataataatttgaagaattttcaaaatgatggaaatttataaagtattt 41443026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 18926839 - 18926747
Alignment:
Q  123 ttttgagataatgtaaatattttgagg--tgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| |||||||| | ||||||||  |||||| |||||||||||| |||||||||| || |||||||||||||||||||||||||||||||    
T  18926839 ttttgaggtaatgtaa-tgttttgagggatgaatttcattgtttggatgataatttgaaaaaatttcaaaatgatggaaatttatgaagtattt 18926747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 14790149 - 14790246
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| |||||||||||||  ||| ||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||    
T  14790149 ggaatgttttgagggaattcaaatactttgaggtgaattttattatttggataataatttaaagaatttttaaaatgatgaaaatttataaagtattt 14790246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 18789573 - 18789633
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgg 197  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  18789573 aaatactttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgg 18789633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 33310875 - 33310937
Alignment:
Q  152 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| ||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  33310875 aattcctttgtttggatagtaatttgtagagttttcaaaatgatggaaatttatgaagtattt 33310937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 15990947 - 15991024
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||| | |||| |||||||||||| |||||||  || |||||||||||||||||||||||||||||||||    
T  15990947 aaatactttgagataaattgcattgtttggatgataatttagagtattttcaaaatgatggaaatttatgaagtattt 15991024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 35777017 - 35776927
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||||||||||||||||| |||||||||||||   ||| |||||| ||||  |||  ||||| |||||||||||||||||| |||||||    
T  35777017 ctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattatttggat 35776927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 26162196 - 26162109
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||||  |||||||||||||   ||| |||||| ||||  |||  ||||| ||||||||||||||||||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 26162109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 31632719 - 31632806
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    |||||||||||||||||||  |||||||||||||   ||| |||||| ||||  |||  ||||| |||||||||||||||||||||||    
T  31632719 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 31632806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 45967002 - 45967080
Alignment:
Q  136 taaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||| |||||||||  ||||||||||| |||||||  |||||||| ||||||||| ||||||||||| |||||    
T  45967002 taaatgtttttaggtgaattttattgtttggatgataattttgagaatttttaaaatgatgaaaatttatgaaatattt 45967080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 29639276 - 29639187
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||| ||||||  |||||||||| ||   ||| |||||| ||||  |||  ||||||||||||||||||||||||||||||||    
T  29639276 taagagtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaattccattgtttggat 29639187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 6498824 - 6498737
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  ||||| ||||| |||||| |||||||||||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaataccattgtttggat 6498737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 5644674 - 5644761
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||| |||  |||||||||||||   ||| |||||||||||  |||  || || |||||||||||||| ||||||||    
T  5644674 ctaagagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 5644761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 29065817 - 29065903
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||||   ||||||||||||   ||| |||||||||||  |||  || || |||||||||||||| ||||||||    
T  29065817 taagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 29065903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 5976577 - 5976501
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||| || |||||| ||||||||| ||  ||||||  | |||||| |||||||| ||||||||||||||||||    
T  5976577 aaatatttttagctgaatttcattgtttgaatg-taatttagataatttttaaaatgatagaaatttatgaagtattt 5976501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 40110735 - 40110820
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgttt 164  Q
    ||||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || ||| |||||||||| |||||||    
T  40110735 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttt 40110820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 33986001 - 33986137
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  ||||||| ||||  | ||| |||||||||||| |||  ||||| ||||||||||||| |||||||| ||||||||||||    
T  33986001 ctaagagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtgaatttcattgtttagataataatttg 33986100  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||| |||||||||||    
T  33986101 aagaattttcaaaatgatggaaattcatgaagtattt 33986137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 26520492 - 26520389
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    ||||| |||||||||||||  |||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26520492 gatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 26520393  T
Q  211 attt 214  Q
    ||||    
T  26520392 attt 26520389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 9982655 - 9982769
Alignment:
Q  100 gaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaa 199  Q
    ||||||||| || | ||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||    
T  9982655 gaatgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgaaa 9982754  T
Q  200 atttatgaagtattt 214  Q
    |||||||||||||||    
T  9982755 atttatgaagtattt 9982769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 24044960 - 24045093
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||| |||||||||||||   ||| ||||||||||   |||  |||||  ||||||||||||||||||||||| ||||| |||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttgggtaatagtttgaag 24045059  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||    
T  24045060 aattttcaaaatgatggaaatttatgaagtattt 24045093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 29257434 - 29257301
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 29257335  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  29257334 cattttcaaaatgatggaaatttatgaagtattt 29257301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 33377384 - 33377247
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataattt 176  Q
    ||||||||||||||||||||  |||||||||||||   ||  | |||||||||  |||  ||||| |||| |||||||||||||||||||||||||||||    
T  33377384 cctaagagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattccattgtttggataataattt 33377285  T
Q  177 gaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  33377284 gaagcattttcaaaatgatggaaatttacgaagtattt 33377247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 34008817 - 34008914
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34008817 ggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattt 34008914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 1088362 - 1088227
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||| ||  ||||||||||||||  ||| | |||||||||  |||  |||||||||| ||| ||||||||||||||||||||||||| |    
T  1088362 taagagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaaatattttggggtaaattccattgtttggataataatttca 1088263  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    || |||||||||||||| ||||||||||||||||||    
T  1088262 agcattttcaaaatgatagaaatttatgaagtattt 1088227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 29482888 - 29482757
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaa 182  Q
    ||||||||||||||  |||||||||||||   | | | |||||||||  |||  ||||| |||| ||||||||||||||||||||||||||||||||| |    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaagca 29482789  T
Q  183 ttttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||    
T  29482788 ttttcaaaatgatggaaatttatgaagtattt 29482757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 31976609 - 31976532
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31976609 aaatattttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 31976532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 214
Target Start/End: Complemental strand, 44346757 - 44346628
Alignment:
Q  85 tgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaatt 184  Q
    ||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcatt 44346658  T
Q  185 ttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||    
T  44346657 ttcaaaatgatggaaatttatgaagtattt 44346628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 44889354 - 44889487
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||  |||||||||||  |||  ||||| ||||| ||||||||||||||||||||||||||||| ||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattccattgtttggataataatttgtag 44889453  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| ||||||| |||||||||||||||||    
T  44889454 aattttcataatgatgaaaatttatgaagtattt 44889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 6416240 - 6416317
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6416240 aaatactttgaagtgaattccattgttttgataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 6416317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 13144639 - 13144716
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  13144639 aaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattt 13144716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 28324745 - 28324612
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| ||||||||||   |||  |||||  ||||| |||||| |||||||||||||||| |||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgagctgaattacattgtttggataatagtttgaag 28324646  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||| ||||||    
T  28324645 aattttcaaaatgatggaaatttatgaggtattt 28324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 24510323 - 24510227
Alignment:
Q  118 gaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||   || ||| |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  24510323 gaatgttttgaggggatttaagtattttgaggtgaactccattgtttgaataataatttgaagaatttttaaaatgatggaaatttatgaagtattt 24510227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 14235 - 14369
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataattt 176  Q
    ||||||||||||||||||||  ||||||||| |||   ||| |||||||| ||  |||  ||||| |||| |||||||| |||||||| |||||||||||    
T  14235 cctaagagtgtgtttggatgg-ggaatgtttggagggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgtttagataataattt 14333  T
Q  177 gaagaattttcaaaatgatggaaatttatgaagtat 212  Q
    |||| |||||||||||||||||||||||||||||||    
T  14334 gaagtattttcaaaatgatggaaatttatgaagtat 14369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 8049292 - 8049387
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8049292 aatgttttgagggaattcaaatactttgaggtaaatttcattgtttggataataatttgaagaattttcaaaatgattgaaatttatgaagtattt 8049387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 15186898 - 15186767
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaa 182  Q
    |||||||||| ||||   ||||||||||||| ||| |||||||||||  |||  ||||| ||| |||||||||| ||||||||| | ||||||  |||||    
T  15186898 agtgtgtttgaatgaaaaaatgttttgagataatgtaatgttttgagtaaattcaaatagtttaaggtgaattctattgtttgggtgataattaaaagaa 15186799  T
Q  183 ttttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||||||||||||||||||||||    
T  15186798 ttttcaaattgatggaaatttatgaagtattt 15186767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 34388569 - 34388640
Alignment:
Q  143 tttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  34388569 tttgaggtgaattccattgtttggataataatttaaagaacttttaaaatgatggaaatttatgaagtattt 34388640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 36625278 - 36625175
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    ||||| ||||| |||||||  |||  || ||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36625278 gatgaaggaatattttgagggaattcaattatttcgatgtgaaatccattgtttagataataatttgaagaattttcaaaatgatggaaatttatgaagt 36625179  T
Q  211 attt 214  Q
    ||||    
T  36625178 attt 36625175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 31980510 - 31980433
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||| |||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  31980510 aaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattt 31980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 40734115 - 40734051
Alignment:
Q  150 tgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40734115 tgaattccattgttttgataataatttgaagcattttcaaaatgatggaaatttatgaagtattt 40734051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 29611406 - 29611485
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatg 196  Q
    |||||||||||||  |||  ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29611406 ggaatgttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatg 29611485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 7079369 - 7079463
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| |||| ||||||||  ||||||||| |||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||    
T  7079369 aatgtttcgagaaaatgtaaag-ttttgaggtaaatttcattgtttggataataatttaaagaattttcaaaacgatgaaaatttaagaagtattt 7079463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 35979084 - 35978957
Alignment:
Q  84 gtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaat 183  Q
    |||||||||||||  |||||||||||||   ||| ||| ||  |||  |||  ||||| ||||||||||||||||||||||||||||||||||||  |||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgaggtgaattccattgtttggataataatttga--aat 35978987  T
Q  184 tttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| |||||||||| ||||||||||||||||    
T  35978986 ttt-aaaatgatgggaatttatgaagtattt 35978957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 43167753 - 43167676
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||   |||||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  43167753 aaatactttgaggtgaatttagttgtttagataataatttgaagaattttcaaaatgttgaaaatttatgaagtattt 43167676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 8469563 - 8469629
Alignment:
Q  147 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatt 213  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||| ||||| ||||||||||    
T  8469563 aggtgaattccattgtttggataataatttagataattttcaaaatgatgaaaattcatgaagtatt 8469629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 10593145 - 10593204
Alignment:
Q  155 tccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||| |||||    
T  10593145 tccattgtttggataataatttgaagaattttcaaaatgattaaactttatgaaatattt 10593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 35404769 - 35404692
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||  | ||||||||||||||||  |||| |||| |||||||| ||||||||||||||||||    
T  35404769 aaatactttgaggtgaattttactgtttggataataattccaagagtttttaaaatgatagaaatttatgaagtattt 35404692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 28190730 - 28190681
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaatttt 186  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||    
T  28190730 aaatattttgaggtgaattcaattgtttggataataacttaaagaatttt 28190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 36103097 - 36103188
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||||||||  |||||||||||||   ||| |||||||| ||  |||  ||||| ||||| ||||||| ||||||||||||    
T  36103097 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgatgtgaattgcattgtttggat 36103188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 6460878 - 6460836
Alignment:
Q  172 aatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| ||||||||||||||||||||||||| |||||    
T  6460878 aatttgaagaaatttcaaaatgatggaaatttatgaattattt 6460836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 15718253 - 15718330
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||| ||| ||| | |||| |||||||  ||||||||||| |||||||||||||| ||||||| |||| ||||    
T  15718253 aaatattttaaggcgaacttcattttttggatgttaatttgaagagttttcaaaatgatgaaaatttaggaaggattt 15718330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 23011732 - 23011821
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||||||||||||| |   ||||||||||||   ||| |||||| ||||  |||  ||||| ||||||||||||||||||||||||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 23011821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 24063807 - 24063754
Alignment:
Q  153 attccattgtttggataataatttgaagaattttcaaaatgatggaaatttatg 206  Q
    |||||||||||||||| |||||||| | |||||||||||| ||| |||||||||    
T  24063807 attccattgtttggatgataatttggataattttcaaaataatgaaaatttatg 24063754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 3853616 - 3853700
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || |||||||||||||| ||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttg 3853700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 3858074 - 3858158
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || |||||||||||||| ||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttg 3858158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 30444980 - 30444929
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||||||||||  |||  ||||| ||||||||||||||||||||||||||    
T  30444980 ggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 30444929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 14991690 - 14991740
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgag 129  Q
    ||||||||||||||||||  ||||||||||||| | ||| |||||||||||    
T  14991690 taagagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgag 14991740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 2867 - 2999
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||| ||||  ||||||||| ||||  ||| |||||||||||  |||  |||||||| |||||||||||||||||||||||||||||||||||    
T  2867 agagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaatattt-gaggtgaattccattgtttggataataatttgaag 2965  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||| |||||    
T  2966 aattttcaaaatgatggaaatttatgaaatattt 2999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 28918162 - 28918299
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  |||||||||||||   ||| |||||||| ||  |||  ||||| ||||||||||||| |||||||||||||||||||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtgaatttcattgtttggataataatttg 28918261  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtatttg 215  Q
    ||| ||||||||||||||||||||||||||| ||||||    
T  28918262 aaggattttcaaaatgatggaaatttatgaaatatttg 28918299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 1368477 - 1368611
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  ||||||||||||||  ||| ||| |||| ||  |||  |||| ||||||||||||||| ||||||||||||||||| |||||    
T  1368477 agagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtgaattctattgtttggataataatatgaag 1368576  T
Q  181 aattttcaaaatgatggaaatttatgaagtatttg 215  Q
     ||||||||||||||||||||||||||| ||||||    
T  1368577 gattttcaaaatgatggaaatttatgaaatatttg 1368611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 31412940 - 31413034
Alignment:
Q  120 atgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||  |||  ||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31412940 atgttttgagggaattcaaatactttgatatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 31413034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 1195389 - 1195466
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1195389 aaatactttgaggtgaattccattgtttagataataatttgaagaattttcaaaattatggaaatttatgaagtattt 1195466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 8475199 - 8475294
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||| |||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8475199 aatgttttgagggaattcaaatacttttgggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattt 8475294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 15616379 - 15616301
Alignment:
Q  136 taaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  15616379 taaatattttgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatgcaaatttatgaagtattt 15616301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 6358302 - 6358191
Alignment:
Q  103 tgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatt 202  Q
    ||||||||| | ||| |||||||||||| ||| |||||| |||| ||||||||| |||||| | |||||||||||||||||||||||||| |||||||||    
T  6358302 tgttttgaggtaatgtaatgttttgagagaatttaaatactttgtggtgaattctattgttagaataataatttgaagaattttcaaaataatggaaatt 6358203  T
Q  203 tatgaagtattt 214  Q
    ||| ||| ||||    
T  6358202 tattaagcattt 6358191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 9697518 - 9697595
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  9697518 aaatactttgatgtgaattccattgtttggataatagtttgatgaattttcaaaatgatgaaaatttatgaagtattt 9697595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 10105118 - 10105172
Alignment:
Q  160 tgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  10105118 tgtttggataataatttgaagcatttttaaaatgatggaaatgtatgaagtattt 10105172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 29395521 - 29395459
Alignment:
Q  152 aattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| ||||| |||||| |||||||| |||||||||||||||||||| ||||| |||||||||    
T  29395521 aatttcattggttggatgataatttggagaattttcaaaatgatggagatttacgaagtattt 29395459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 26901781 - 26901704
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||| ||||||||| ||||||| |||  |||||||  |||||||| |||||||| ||||||||||||||||||    
T  26901781 aaataattttaggtgaatttcattgttcggaggataattttgagaatttttaaaatgatagaaatttatgaagtattt 26901704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 34245059 - 34244966
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||| ||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  ||||| ||||| || |||||||||||||||||    
T  34245059 acccttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttggat 34244966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 413692 - 413614
Alignment:
Q  136 taaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| ||||||||||||| |||| |||  ||||||||||||| |||||| ||||| ||| |||||||| || |||||    
T  413692 taaatactttgaggtgaatttcattttttttataataatttgaataatttttaaaataatgaaaatttataaaatattt 413614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 15832522 - 15832576
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaa 191  Q
    ||||| |||| |||||||| ||||||||||||| |||||||||| ||||||||||    
T  15832522 aaatactttggggtgaatttcattgtttggatactaatttgaagtattttcaaaa 15832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 29889513 - 29889420
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||| ||||||||||||||||  ||||||||||||    ||| |||||||||||  |||  ||||| ||||| |||||||||||| |||||||    
T  29889513 acccttagagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttgatgtgaattccattatttggat 29889420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 10737726 - 10737668
Alignment:
Q  147 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttat 205  Q
    |||| |||| |||||||| ||| ||| |||| ||||||||||||||||| |||||||||    
T  10737726 aggtaaatttcattgttttgatgatagtttggagaattttcaaaatgatagaaatttat 10737668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 34364781 - 34364830
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||| ||||  ||| |||||| ||||||||||||||||||||||||||    
T  34364781 aatgttatgagggaatttaaatactttgaggtgaattccattgtttggat 34364830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 6919872 - 6919836
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgag 111  Q
    ||||||||||||||||||||||  |||||||||||||    
T  6919872 accctaagagtgtgtttggatgggggaatgttttgag 6919836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 9285647 - 9285731
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || |||||| ||||||| ||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttg 9285731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 41762289 - 41762152
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataattt 176  Q
    ||||||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| |||||||||||||||||||||||||||||    
T  41762289 cctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataattt 41762190  T
Q  177 gaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| |||||||||||||||||||||||||||||||||    
T  41762189 gaagcattttcaaaatgatggaaatttatgaagtattt 41762152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 33146209 - 33146306
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33146209 ggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattt 33146306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 116 - 215
Target Start/End: Complemental strand, 37241145 - 37241046
Alignment:
Q  116 tggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttg 215  Q
    ||||||||||| ||  |||  ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37241145 tggaatgttttcagggaattgaaatactttgaggtgaattccattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtatttg 37241046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 9894336 - 9894259
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9894336 aaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattt 9894259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 22303940 - 22303807
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| ||||||||||   |||  |||||  |||||||||||| |||||||||| ||||| |||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaag 22303841  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||    
T  22303840 aattttcaaaatgatggaaatttatgaagtattt 22303807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 927299 - 927434
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  | |||||||||||   ||| | |||||||||  |||  ||||| |||| ||||||||||||||||||||||||||||||    
T  927299 ctaagagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttg 927398  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| ||||||||||| |||||||||||||||||||||    
T  927399 aagcattttcaaaat-atggaaatttatgaagtattt 927434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 10314705 - 10314782
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10314705 aaatattttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattt 10314782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 14834880 - 14834957
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14834880 aaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattt 14834957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 15270888 - 15270791
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  15270888 ggaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttgtagaatattcaaaatgatggaaatttatgaagtattt 15270791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 22305130 - 22305227
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  || || ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  22305130 ggaatgttttgagggaattcaactactttgaggtgaattccattgtttggataataatttgtagaattttcaaaatgaaggaaatttatgaagtattt 22305227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 34105107 - 34105204
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||| |||  ||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  34105107 ggaatgttttgagaaaattcaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatagaaatttacgaagtattt 34105204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 17542394 - 17542298
Alignment:
Q  118 gaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||  |||  ||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  17542394 gaatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttaaagaatttttaaaatgatggaaatttatgaagtattt 17542298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 32250169 - 32250035
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  |||||||||||||   | | |||||||||||  |||  |||||  ||||| ||||||||||||||||||||||||||| |    
T  32250169 taagagtgtgtttggatgg-ggaatgttttgagggaaagtaatgttttgagggaattcaaataccttgagatgaattccattgtttggataataatttaa 32250071  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||||||||| ||||||||||||||||    
T  32250070 agaatttttaaaatgatggtaatttatgaagtattt 32250035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 17492679 - 17492585
Alignment:
Q  120 atgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||  |||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  17492679 atgttttgagggaattcaaataatttgaggtgaattccattgtttggatgataatttgaagaattttcaaaatgatgaaaatttaagaagtattt 17492585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 28489499 - 28489593
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagta 211  Q
    ||||| |||||||| |||  ||||| |||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  28489499 ggaatattttgagagaattcaaatactttgaggtgaattccattgtttcgataataatttaaagaatttttaaaatgatggaaatttatgaagta 28489593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 12479963 - 12480040
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12479963 aaatactttgaggtgaatttcattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattt 12480040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 22766952 - 22767081
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||  |||||||||||  |||  ||||| ||| |||||||||| ||||||||||||||||||| |||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattctattgtttggataataatttaaag 22767051  T
Q  181 aattttcaaaatgatggaaatttatgaagt 210  Q
    |||||||| ||||||||||||||| |||||    
T  22767052 aattttcagaatgatggaaatttacgaagt 22767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 28490031 - 28490115
Alignment:
Q  120 atgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaattta 204  Q
    ||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28490031 atgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaggaattttcaaaatgatggaaattta 28490115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 22302592 - 22302655
Alignment:
Q  151 gaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22302592 gaattccattgtttggataataatttgaagatttttcaaaatgatggaaatttatgaagtattt 22302655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 35111282 - 35111359
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  35111282 aaatattttgatgtgagttctattgtttggataataatttgaagaactttcaaaatgatgaaaatttatgaagtattt 35111359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 35379344 - 35379475
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  ||||||||||||||| ||| |||||||||||  |||  ||||  ||||| |||||||  |||| |||||| |||||||||||    
T  35379344 agagtgtgtttggatgg-ggaatgttttgagataatgtaatgttttgagggaattcaaattctttgaagtgaattttattgattggatgataatttgaag 35379442  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||| ||||||||||||||||||||    
T  35379443 -attttcaaaatggtggaaatttatgaagtattt 35379475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 40090487 - 40090381
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  |||||||||||||   ||| ||||||||||   |||  ||||| ||||||||||||||||||||||||||||||||||     
T  40090487 ctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattccattgtttggataataattta 40090388  T
Q  178 aagaatt 184  Q
    |||||||    
T  40090387 aagaatt 40090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 30519060 - 30519136
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||| ||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30519060 aaatattttgcggtgaattttat-gtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattt 30519136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 30559400 - 30559476
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||| ||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30559400 aaatattttgcggtgaattttat-gtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattt 30559476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 17493166 - 17493102
Alignment:
Q  150 tgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  17493166 tgaattccattgtttggatgataatttggagaattttcaaaatgatggaaatttataaagtattt 17493102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 37241590 - 37241535
Alignment:
Q  159 ttgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37241590 ttgtttggataatattttgaagaattttcaaaatgatggaaatttatgaagtattt 37241535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 6772219 - 6772150
Alignment:
Q  145 tgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| |||||||||||| |||||||||| |||| |||||| ||||||||||||||||||||||    
T  6772219 tgaggtgaatttcattgtttggatgataatttgaataattatcaaaacgatggaaatttatgaagtattt 6772150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 8264585 - 8264641
Alignment:
Q  158 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8264585 attgtttagataataatttgaagaatttccaaaatgatggaaatttatgaagtattt 8264641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 12991370 - 12991276
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatg 206  Q
    ||||| ||||||||||||| ||| |||| | ||||||||||||||| ||||||||||||||||||||||   |||| ||||| ||| |||||||||    
T  12991370 gatgagggaatgttttgaggtaaagtaa-tgttttgaggtgaattctattgtttggataataatttgaaatttttttaaaataatgaaaatttatg 12991276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 31316223 - 31316294
Alignment:
Q  143 tttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| ||||||| ||| ||||||| |||||||||||||||||  ||||||||||||||||||||| ||||    
T  31316223 tttgagatgaattctattatttggatgataatttgaagaattttttaaatgatggaaatttatgaagcattt 31316294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 25935363 - 25935273
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||||||||||||||||  |||||||||||||   ||| |||||| ||||  |||  ||||| ||||||||||||||||||||||||||    
T  25935363 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattccattgtttggat 25935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 37090282 - 37090395
Alignment:
Q  82 gagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaaga 181  Q
    ||||||||||||||    |||||||||||| | |||  ||||||||||  |||  ||||||||| | ||||||||||||||||||||||||   || |||    
T  37090282 gagtgtgtttggatagaagaatgttttgaggtaatgcgatgttttgaggaaattcaaatatttttatgtgaattccattgtttggataatagcatggaga 37090381  T
Q  182 attttcaaaatgat 195  Q
    ||||||||||||||    
T  37090382 attttcaaaatgat 37090395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 37722970 - 37722877
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||| ||||||||||||||||  ||||| |||||||   ||| |||||||||||  |||  ||||| ||||||||||||||||||||||||||    
T  37722970 acccttagagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 37722877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 40089799 - 40089754
Alignment:
Q  169 aataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  40089799 aataatttaaagaattttcaaaatgatggaaatttatgaagtattt 40089754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 17444435 - 17444367
Alignment:
Q  147 aggtgaattccattgtttggataataatttgaagaatttt-caaaatgatggaaatttatgaagtattt 214  Q
    |||| ||||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||    
T  17444435 aggtaaattctattgtttggataatgatttagagaatttttcaaaatgatggaaatttatgaagtattt 17444367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 13064993 - 13064899
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatg 206  Q
    ||||| ||||||||||||  ||| |||| | ||||||||||||||| ||||||||||||||||||||||   |||| ||||| ||| |||||||||    
T  13064993 gatgagggaatgttttgacgtaaagtaa-tgttttgaggtgaattctattgtttggataataatttgaaatttttttaaaataatgaaaatttatg 13064899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 11601095 - 11601171
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||  ||| ||||||| |||||||||||||||||||||||  ||| ||||| ||||||||||    
T  11601095 aaataatttgaggtgaattttattatttggatgataatttgaagaattttcaaaattgtgg-aatttctgaagtattt 11601171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 19533975 - 19533890
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||  |||||||||||||   ||| |||||| ||||  |||  ||||| ||||||||||||| ||||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 19533890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 37145569 - 37145484
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||| |||||||||  |||||||||||||   ||| |||||| ||||| |||  ||||| ||||||||||||| ||||||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtgaatttcattgtttggat 37145484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 9894125 - 9894089
Alignment:
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||| ||||||||||||||||    
T  9894125 aagaattttcaaaatgatgggaatttatgaagtattt 9894089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 8674478 - 8674420
Alignment:
Q  149 gtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaa 208  Q
    |||||||||||||||||||||||||  || ||||||| |||||| ||| |||||||||||    
T  8674478 gtgaattccattgtttggataataa-atggagaatttccaaaattatgaaaatttatgaa 8674420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 11409271 - 11409314
Alignment:
Q  171 taatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||    
T  11409271 taatttggagaatttttaaaatgatggaaatttgtgaagtattt 11409314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 12064502 - 12064451
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||||||||||  ||| |||||| ||||||||||||| ||||||||||||    
T  12064502 ggaatgttttgagggaatttaaatactttgaggtgaatttcattgtttggat 12064451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 20523291 - 20523208
Alignment:
Q  82 gagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    |||||||||||||||  ||||||||||||||  ||| |||||||||||  |||  || || ||| |||||||||| ||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttg 20523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 8255065 - 8255130
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattt 185  Q
    |||||||||||  |||  ||||||||| ||||||||| ||||||||||||||||||||  |||||||    
T  8255065 aatgttttgagggaattcaaatatttt-aggtgaatttcattgtttggataataatttagagaattt 8255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 2550322 - 2550358
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgag 111  Q
    ||||||||||||||||||||||  |||||||||||||    
T  2550322 accctaagagtgtgtttggatgggggaatgttttgag 2550358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 40643980 - 40643928
Alignment:
Q  77 cctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgag 129  Q
    ||||||||||||||||||||  |||||||||||||   ||| |||||||||||    
T  40643980 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 40643928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 17905651 - 17905787
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    ||||||||||||| |||||| ||||||||||||||  ||| |||||||| |   |||  |||||||||||||||||||||||| ||||||||||||||||    
T  17905651 ctaagagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattccatt-tttggataataatttg 17905749  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtatttg 215  Q
    ||| ||||||||||||||||||||||||||| ||||||    
T  17905750 aaggattttcaaaatgatggaaatttatgaaatatttg 17905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 33189333 - 33189197
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| ||||||||||||||||||||||||||||||    
T  33189333 ctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttg 33189234  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| |||||||||||||||||||||||||||||||||    
T  33189233 aagcattttcaaaatgatggaaatttatgaagtattt 33189197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 769034 - 769169
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| |||||||||||||||||||||||||||||||    
T  769034 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttga 769133  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    || |||||||||||||||||||||||||||||||||    
T  769134 agcattttcaaaatgatggaaatttatgaagtattt 769169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 7228087 - 7227952
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  | ||||||||||||  ||| ||||||||||   ||| ||||||  ||||||| |||| |||||||||||||||| |||||    
T  7228087 taagagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatttaaataccttgaggtaaatttcattgtttggataatagtttga 7227988  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||||    
T  7227987 agaattttcaaaatgatggaaatttatgaagtattt 7227952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 8736484 - 8736381
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    ||||| |||||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8736484 gatgagggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagt 8736385  T
Q  211 attt 214  Q
    ||||    
T  8736384 attt 8736381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 1583882 - 1583749
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 1583783  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  1583782 tattttcaaaatgatggaaatttatgaagtattt 1583749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 45094544 - 45094411
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    |||||||||||| |||| |||||||||||||   ||  |||||||||||  ||| ||| || ||| | |||||||||||||||||||||| |||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatttaactactttaaagtgaattccattgtttggataagaatttgaag 45094445  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||    
T  45094444 aattttcaaaatgatggaaatttatgaagtattt 45094411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 11141303 - 11141438
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| |||||||| ||||||||||||||||||||||    
T  11141303 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattacattgtttggataataatttga 11141402  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    || |||||||||||||||||||||||||||||||||    
T  11141403 agtattttcaaaatgatggaaatttatgaagtattt 11141438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 32840227 - 32840132
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  ||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32840227 aatgttttgagggaatttaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaattcatgaagtattt 32840132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 44255674 - 44255767
Alignment:
Q  121 tgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||| |||  ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44255674 tgttttgagagaattcaaatactttggggtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 44255767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 13017779 - 13017913
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  | |||||||||||   ||| ||| |||| ||  |||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  13017779 agagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaattccattgtttggataataatttgaag 13017878  T
Q  181 aattttcaaaatgatggaaatttatgaagtatttg 215  Q
     ||||||||||||||| ||||||||||| ||||||    
T  13017879 gattttcaaaatgatgaaaatttatgaaatatttg 13017913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 7611905 - 7611828
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7611905 aaatactttgatgtgaattccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattt 7611828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 20935742 - 20935839
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  20935742 ggaatgttttgagggaattcaaatactttgatgtgaattccattgtttggatgataatttgaagaattttcaaaatgattgaaatttatgaagtattt 20935839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 3092279 - 3092415
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||||||||| ||||||||  |||||||||||||   ||| | |||||||||  |||  ||||| |||| ||| |||||||||||||||||||||||||     
T  3092279 ctaagagtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtaaattccattgtttggataataatttc 3092378  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||| |||||||||||||| ||||||||||||||||||    
T  3092379 aagcattttcaaaatgatagaaatttatgaagtattt 3092415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 12263460 - 12263559
Alignment:
Q  115 atggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| |||||||| |||  |||||||||||| |||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  12263460 atggaatattttgagagaattcaaatattttgagttgaatttcattgtttggataataatttgaaattttttcaaaatgatggaaatttatgaagtattt 12263559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 214
Target Start/End: Complemental strand, 35047758 - 35047619
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataat 174  Q
    ||||| ||||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| |||| ||||||||||| |||||||||||||||    
T  35047758 acccttagagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttggggtgaattccaatgtttggataataat 35047659  T
Q  175 ttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||| ||||||||||| |||||||||||| ||||||||    
T  35047658 ttgaagcattttcaaaataatggaaatttataaagtattt 35047619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 28740599 - 28740729
Alignment:
Q  84 gtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaat 183  Q
    ||||||||| |||  | |||||||||||   ||| |||||||||||  |||  ||||| ||||| || ||||||||||||| ||| ||||||||||||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttagatgataatttgaagaat 28740698  T
Q  184 tttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||||||||||||    
T  28740699 tttcaaaatgatggaaatttatgaagtattt 28740729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 7167684 - 7167607
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7167684 aaatactttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattt 7167607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 7309780 - 7309703
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7309780 aaatactttggggtgaattccattatttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattt 7309703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 21504486 - 21504583
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||    
T  21504486 ggaatgttttgagggaattcaaatattttgagatgaattccattgtttgaataataatttgaagaattttcaaaatgaagttaatttatgaagtattt 21504583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 30698289 - 30698414
Alignment:
Q  89 tttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttca 188  Q
    ||||||||  |||||||||||||   ||| ||||||||||   |||  |||||  |||||||||||| |||||||||||||||| |||||||||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttggataatagtttgaagaattttca 30698388  T
Q  189 aaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||| ||||||||||    
T  30698389 aaatgatggaaatttgtgaagtattt 30698414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 6749219 - 6749290
Alignment:
Q  143 tttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6749219 tttgatgtgaaacccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 6749290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 32839683 - 32839588
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  32839683 aatgttttgagggaattcaaatactttgacgtgaattccattgtttggataataatttgaagaattttccaaatgatggaatttcatgaagtattt 32839588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 39630223 - 39630357
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    |||||||||||||| |||  | |||||||||||   ||| | |||||||||  |||  |||||||| |||| |||||| |||||||||||||||||||||    
T  39630223 taagagtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaaatattt-gaggggaattctattgtttggataataatttga 39630321  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |  |||||||||||||||||||||||||||||||||    
T  39630322 actattttcaaaatgatggaaatttatgaagtattt 39630357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 214
Target Start/End: Original strand, 740724 - 740837
Alignment:
Q  101 aatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaa 200  Q
    ||||||||||||| ||| ||||||||| || |||  | ||  |||||||||||||  |||||||| || ||||||||||||||||||||||| |||||||    
T  740724 aatgttttgagataatgtaatgttttgtgagaattcatatcatttgaggtgaattttattgtttgaatgataatttgaagaattttcaaaataatggaaa 740823  T
Q  201 tttatgaagtattt 214  Q
    ||||||||||||||    
T  740824 tttatgaagtattt 740837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 1730090 - 1730185
Alignment:
Q  118 gaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| |||||||  ||| |||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1730090 gaatattttgagggaatttaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatgg-aatttatgaagaattt 1730185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 41585725 - 41585630
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||| ||||| ||||| |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41585725 aatgttttgagggaattcaaatactttgaagtgaaatttattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattt 41585630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 2274864 - 2274729
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttg 177  Q
    |||| ||||||||||||||| ||||||||| ||| | ||  ||| |||| ||  |||  ||||||||| || | ||||||||||||||||||| |||| |    
T  2274864 ctaatagtgtgtttggatgaaggaatgtttcgaggtaatacaatattttaagggaattcaaatatttttagatcaattccattgtttggataagaattgg 2274765  T
Q  178 aagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    | || |||||||||||||||| |||||||||| ||||    
T  2274764 a-gatttttcaaaatgatggagatttatgaagaattt 2274729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 30751418 - 30751308
Alignment:
Q  82 gagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaaga 181  Q
    ||||||||||||||||  |||||||||||||| ||| |||||||||||  ||| |||||| ||| || ||||||| |||| ||||||||||||||  |||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttgagtgaatttaaata-tttaagatgaattctattg-ttggataataatttagaga 30751321  T
Q  182 attttcaaaatga 194  Q
    ||||| |||||||    
T  30751320 atttttaaaatga 30751308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 11036428 - 11036475
Alignment:
Q  167 ataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  11036428 ataataatttgaagaatttttaaaatgatggaaatttatgaagtattt 11036475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 214
Target Start/End: Complemental strand, 14306810 - 14306747
Alignment:
Q  151 gaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| |||||||||||||||||||| || |||||| ||||||||| ||||||||||| |||||    
T  14306810 gaatttcattgtttggataataatttaaataatttttaaaatgatgaaaatttatgaattattt 14306747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 44205693 - 44205602
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    |||||||||||  |||  ||||| ||| | || ||||| ||| ||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  44205693 aatgttttgagggaattcaaatacttttatgtaaattctattatttggatgataaattgaagaattttgaaaatgatggaaatttatgaagt 44205602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 168
Target Start/End: Original strand, 10480116 - 10480206
Alignment:
Q  78 ctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||||||||||||||||  |||||||||||||   ||| ||||||  |||  |||  ||||| ||||||||||||||||||||||||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaattccattgtttggat 10480206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 27033488 - 27033574
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||||  ||||||||||||||  ||| |||||||||||  |||  || || |||||||||||||| ||||||||    
T  27033488 taagagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttg 27033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 40026102 - 40026192
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaag 209  Q
    |||||||||||  ||| |||||| |||||||||||||| |||||||| |||||| ||| ||   |||| ||||||||| ||||||||||||    
T  40026102 aatgttttgaggaaatttaaatactttgaggtgaattctattgtttgaataatagttttaaatttttttaaaatgatgtaaatttatgaag 40026192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 41461674 - 41461590
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || ||||||||||||||||| ||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 41461590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 168
Target Start/End: Complemental strand, 11532324 - 11532239
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||  ||||| ||| |||   ||| |||||||||||  |||  ||||| ||||||||||||||||||||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggat 11532239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 11793897 - 11793982
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||  ||||| |||||||   ||| |||||| ||||  |||  ||||| ||||||||||||||||||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttggat 11793982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 17180295 - 17180372
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||||| |||||||||||||   ||| |||||||||||  |||  || ||||||||| |||||||    
T  17180295 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgagatgaattc 17180372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 28022119 - 28022044
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||| ||||||||||  ||||||  || |||||||||||||||| |||||||||| |||||||||| ||||||    
T  28022119 aaatatttt-aggtgaattcggttgttta-attataatttgaagaatttgcaaaatgatgaaaatttatgaggtattt 28022044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 14537198 - 14537274
Alignment:
Q  80 aagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    |||||||||||||||||  |||||||||||||   ||| ||||||||||| ||||  || || ||||||||||||||    
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaattc 14537274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 29279086 - 29278957
Alignment:
Q  87 tgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattt- 185  Q
    ||||||||||| ||||||||||||| | ||| ||||||| ||||||||  |||||  ||  | | ||||| ||||||||||| || |||||||   |||     
T  29279086 tgtttggatgaaggaatgttttgaggtaatgtaatgtttcgagataattcaaatacattttgctaaattctattgtttggatgatgatttgaattttttt 29278987  T
Q  186 -tcaaaatgatggaaatttatgaagtattt 214  Q
     | ||||||||| | |||||||||||||||    
T  29278986 ataaaaatgatgaacatttatgaagtattt 29278957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 11595357 - 11595402
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgttt 164  Q
    |||||||||||  |||  ||||||||||||||||||||||||||||    
T  11595357 aatgttttgagggaattcaaatattttgaggtgaattccattgttt 11595402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 14365698 - 14365775
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || || ||||||||||||||    
T  14365698 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 14365775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 36272474 - 36272422
Alignment:
Q  158 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    ||||||||||| |||||||||| |||||| |||||| || |||||||| ||||    
T  36272474 attgtttggatgataatttgaataatttttaaaatggtgcaaatttataaagt 36272422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 42776635 - 42776770
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||   ||||||||| || | ||| |||||||||||  |||  ||||| ||| ||||||||| |||||||||||| |||||||||    
T  42776635 taagagtgtgtttggatggaagaatgtttttaggttatgtaatgttttgagtaaattcaaatacttttaggtgaatttcattgtttggatgataatttga 42776734  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||||    
T  42776735 agaattttcaaaatgatggaaatttatgaagtattt 42776770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 56339163 - 56339266
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    |||||||||||||||||||  |||  ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56339163 gatgatggaatgttttgagggaattcaaatactttgatgtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 56339262  T
Q  211 attt 214  Q
    ||||    
T  56339263 attt 56339266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 214
Target Start/End: Original strand, 10354341 - 10354475
Alignment:
Q  80 aagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaa 179  Q
    |||||||||||| ||| |  |||||||||||| | ||| |||||||||||| |||  |||||||| |||||||||||  || ||||||||||||||||||    
T  10354341 aagagtgtgtttagataaatgaatgttttgaggtaatgtaatgttttgagaaaattgaaatatttggaggtgaattctcttatttggataataatttgaa 10354440  T
Q  180 gaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||| ||||||||||||||||    
T  10354441 gaattttcaaaatgatgggaatttatgaagtattt 10354475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 2125857 - 2125990
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||||||||  ||||| |||||||   ||| | |||||||||  |||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 2125956  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  2125957 cattttcaaaatgatggaaatttatgaagtattt 2125990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 35470122 - 35470255
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaag 180  Q
    ||||||||||| |||| || |||||||||||   ||| | |||||||||  |||  ||||| |||| |||||||||||||||||||||||||||||||||    
T  35470122 agagtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttggataataatttgaag 35470221  T
Q  181 aattttcaaaatgatggaaatttatgaagtattt 214  Q
     |||||||||||||||||||||||||||||||||    
T  35470222 cattttcaaaatgatggaaatttatgaagtattt 35470255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 46242561 - 46242484
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46242561 aaatactttgaggtgaattccattgtttggagaataatttgaagaattttcaaaatgatggaaatttatgaagtattt 46242484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 53760827 - 53760730
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53760827 ggaatgttttgagggaattcaaatattttgatgtgaattctattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattt 53760730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 29091175 - 29091270
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29091175 aatgttttgagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 29091270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 42775641 - 42775738
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  42775641 ggaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaataattttcaaaataatggaaatttatgaagtattt 42775738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 40338295 - 40338192
Alignment:
Q  111 gatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagt 210  Q
    ||||| ||||||||||||   |||  ||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  40338295 gatgagggaatgttttgatggaattcaaatactttgaggtgaatttcattgtttggataataatttacagaattttcaaaatgatggaaatttatgaagt 40338196  T
Q  211 attt 214  Q
    ||||    
T  40338195 attt 40338192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 16516171 - 16516305
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat-aataatttgaa 179  Q
    ||||||||||||||||  ||||||||||||    ||| ||||||||||   ||| |||||| ||||| ||||| |||||||||||||| || ||||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatttaaatactttgatgtgaactccattgtttggattaagaatttgaa 16516270  T
Q  180 gaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||| |||||||||||||||||    
T  16516271 gaattttcaaaatgatgaaaatttatgaagtattt 16516305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 17727101 - 17727198
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||| |  |||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  17727101 ggaatgttttgtgggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaattatggaaatttacgaagtattt 17727198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 31947655 - 31947724
Alignment:
Q  145 tgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  31947655 tgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatagaaatttacgaagtattt 31947724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 46243132 - 46243037
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||| |||  |||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  46243132 ggaatgttttgagagaattcaaatattt-gaggt-aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttaagaagtattt 46243037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 41139473 - 41139606
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  || | | |||||| | ||| |||||||||||  |||  ||||| ||| |||||||||| ||||||||||||||||||| |    
T  41139473 taagagtgtgtttggatg--gggaagctttgaggtaatgtaatgttttgaggaaattcaaatacttttaggtgaattctattgtttggataataatttaa 41139570  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| ||||||||| |||||||||||||||||    
T  41139571 agaatttttaaaatgatgaaaatttatgaagtattt 41139606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 40548253 - 40548158
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  40548253 aatgttttgaggaaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttaggaaatattt 40548158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 42776249 - 42776183
Alignment:
Q  148 ggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  42776249 ggtgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattt 42776183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 27284699 - 27284602
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||| ||| |||  ||||| ||||||||||||| ||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  27284699 ggaatgttttaagagaattcaaatactttgaggtgaatttcattgtttgtataatgatttgaataatttttaaaatgatggaaatttatgaagtattt 27284602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 52295062 - 52294986
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatt 213  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  52295062 aaatattttgagacgaatttcattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtatt 52294986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 194
Target Start/End: Original strand, 1539649 - 1539754
Alignment:
Q  89 tttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttca 188  Q
    ||||||||  |||||||||||||   ||| |||||||||||  |||  ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgtagaattttca 1539748  T
Q  189 aaatga 194  Q
    ||||||    
T  1539749 aaatga 1539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 56118667 - 56118570
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| ||||| ||| ||| ||||| |||||||||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||||||| ||||||||    
T  56118667 ggaaagttttaagagaatttaaatgttttgaggtgaatttcattgtttgaataataatttgaataattttcaaaatagtggaaatttataaagtattt 56118570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 26534531 - 26534626
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||  |||  ||||| ||||  |||||||| ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  26534531 aatgttttgagggaattcaaatactttgttgtgaattctattgtttggataataatttcaagaattttcaaaatgatagaaattcatgaagtattt 26534626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 4490068 - 4490160
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  ||| ||||||||||||     |||  ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  4490068 ggaatgttttgagggaatttaaatattttga-----attttattgtttggataataatttaaagaattttcaaaatgatggaaatttatgatgtattt 4490160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 13318664 - 13318599
Alignment:
Q  149 gtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  13318664 gtgaattttattgtttggataataatttgaagaattttcaaaatgatagaaacttatgaagtattt 13318599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 52493924 - 52494056
Alignment:
Q  79 taagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga 178  Q
    ||||||||||||||||||  ||||||||||||  | ||| |||| ||||||  |||  ||||||||| ||||||||| | |||||||||| |||||||      
T  52493924 taagagtgtgtttggatg-gggaatgttttgaagtaatgtaatg-tttgagggaattaaaatatttttaggtgaatttcgttgtttggatgataattttg 52494021  T
Q  179 agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||| |||||||| |||||||||||||    
T  52494022 agaatttttaaaaggatggaaa-ttatgaagtattt 52494056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 5715737 - 5715815
Alignment:
Q  74 caccctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtga 152  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||  ||||| ||||| ||||    
T  5715737 cacccttagagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttgatgtga 5715815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 16300254 - 16300158
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttga-agaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||| |||  ||||| |||||||||||||||||||||| ||||| ||||| | | | ||||  |||||||| |||||||||||||||||    
T  16300254 aatgttttgagaaaattcaaatactttgaggtgaattccattgttttgataacaatttcagaaattttttcaaatgatgaaaatttatgaagtattt 16300158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 24062840 - 24062904
Alignment:
Q  150 tgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| ||| |||||| |||||||  ||||||||||||||||||||||||| ||||||||||    
T  24062840 tgaattcctttgattggatgataattttgagaattttcaaaatgatggaaatttgtgaagtattt 24062904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 47108342 - 47108413
Alignment:
Q  142 ttttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| ||||| |||||||| ||||| ||||||||||||||| |||| |||| |||||||||||||||||    
T  47108342 ttttgagg-gaatttcattgtttagataacaatttgaagaatttttaaaacgatgaaaatttatgaagtattt 47108413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 19461771 - 19461677
Alignment:
Q  119 aatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatt 213  Q
    |||||||||||  |||  ||||| |||||  | ||||| ||||||||||||||||| || |||||||| | ||||||||||||||||||| ||||    
T  19461771 aatgttttgagcgaattcaaataatttgatataaattctattgtttggataataatatggagaatttttagaatgatggaaatttatgaattatt 19461677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 24705432 - 24705484
Alignment:
Q  162 tttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| |||||    
T  24705432 tttgaataataatttgaagaatttttaaaatgatagaaatttatgaaatattt 24705484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 29686080 - 29686016
Alignment:
Q  150 tgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| ||||||| ||| ||||||||||   ||||||||||||||||||||||| ||||||||    
T  29686080 tgaattctattgtttagatgataatttgaatttttttcaaaatgatggaaatttataaagtattt 29686016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 21012612 - 21012566
Alignment:
Q  118 gaatgttttgagataatgtaaatattttgaggtgaattccattgttt 164  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||    
T  21012612 gaatgttttgagggaatttaaatattttgaggtgaattccattgttt 21012566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 30303800 - 30303854
Alignment:
Q  160 tgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||| ||  ||||||||||||||||||| ||| |||||||||||||||||    
T  30303800 tgtttggatgattttttgaagaattttcaaaataatgaaaatttatgaagtattt 30303854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 26250903 - 26250984
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||| ||||||||||||||| ||||| ||||||| | ||| |||||||||||  |||  || |||||||||||| ||||    
T  26250903 accctaatagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgaggtggattc 26250984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 10633035 - 10633119
Alignment:
Q  84 gtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    |||||||||||||  |||||||||||||   ||| |||||| ||||  |||  ||||| ||||||||||||| ||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttggat 10633119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 15660342 - 15660258
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||||||||||||||| |||||||||||||   ||| |||||||||||  |||  || || |||||| ||||||| ||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttg 15660258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 54566252 - 54566308
Alignment:
Q  158 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||||||||||||   |||| |||||||| ||||||||||||||||||    
T  54566252 attgtttgaataataatttgaaatttttttaaaatgatcgaaatttatgaagtattt 54566308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 214
Target Start/End: Complemental strand, 9451199 - 9451072
Alignment:
Q  87 tgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaatttt 186  Q
    ||||||||||| |||||||||| || | ||| |||||||||||| | |  ||||| ||| || | ||||  ||||||||||| || |||||||   ||||    
T  9451199 tgtttggatgaaggaatgttttaaggtaatgtaatgttttgagagagttcaaatacttttagctaaattttattgtttggatgatgatttgaattttttt 9451100  T
Q  187 caaaatgatggaaatttatgaagtattt 214  Q
     ||||||||  | |||||||||||||||    
T  9451099 aaaaatgattaacatttatgaagtattt 9451072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 31473849 - 31473936
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggat 168  Q
    ||||||||||||||||  |||||||||||||   ||| |||||| ||||  |||  ||||| |||||||||||||  |||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattttattgtttggat 31473936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 49111471 - 49111396
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattc 156  Q
    ||||||||||||||||  |||||||||||||   ||| |||||||||||  |||  || |||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattc 49111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 10128139 - 10128049
Alignment:
Q  75 accctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttg 165  Q
    ||||| ||||||| ||||||||  ||||||||||||||  ||| |||||||||||  |||  || || |||||| ||||||| ||||||||    
T  10128139 acccttagagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagatgaattctattgtttg 10128049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 111
Target Start/End: Original strand, 56339151 - 56339181
Alignment:
Q  81 agagtgtgtttggatgatggaatgttttgag 111  Q
    |||||||||||||||||||||||||||||||    
T  56339151 agagtgtgtttggatgatggaatgttttgag 56339181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 30303172 - 30303228
Alignment:
Q  158 attgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| ||| ||||| ||||||||||||||||| | | ||||||||||| |||||    
T  30303172 attgtttagatgataatatgaagaattttcaaaataaagtaaatttatgaactattt 30303228  T

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Target: scaffold0129 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 208
Target Start/End: Original strand, 19193 - 19324
Alignment:
Q  76 ccctaagagtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatt 175  Q
    |||||| ||||||||||||||  ||| | |||||||   ||| |||||||||||  |||  |||||||||||||||||||||||||||| ||||||||||    
T  19193 ccctaaaagtgtgtttggatgggggagtattttgagggaatgtaatgttttgagg-aattcaaatattttgaggtgaattccattgtttcgataataatt 19291  T
Q  176 tgaagaattttcaaaatgatggaaatttatgaa 208  Q
    ||||||||||| |||||||||||||||||||||    
T  19292 tgaagaattttaaaaatgatggaaatttatgaa 19324  T

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Target: scaffold0129; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 19855 - 19725
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaa 182  Q
    ||||||||||||||  ||| |||||||||   ||| |||||||| ||| |||  ||||| ||||||||||||| |||| ||| |||||||||||||||||    
T  19855 agtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtgaattacattatttagataataatttgaagaa 19757  T
Q  183 ttttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||||||||||||||||||||||||||||    
T  19756 ttttcaaaatgatggaaatttatgaagtattt 19725  T

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Target: scaffold0301 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 7153 - 7284
Alignment:
Q  83 agtgtgtttggatgatggaatgttttgagatgatggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaa 182  Q
    ||||||||||||||  |||||||||||||   ||| | |||||| ||  |||  ||||| ||||  |||||||||||||||||||||||||||||||| |    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaaatactttggagtgaattccattgtttggataataatttgaagca 7252  T
Q  183 ttttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||||||||||| |||||||||    
T  7253 ttttcaaaatgatggaaatttacgaagtattt 7284  T

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Target: scaffold0065 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 9617 - 9526
Alignment:
Q  123 ttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||  ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  9617 ttttgagagaattcaaatactttgaggtaaattccattgtttggataatcatttgaagaattttcaaaatgatggaaatttataaagtattt 9526  T

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Target: scaffold0065; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 2915 - 2850
Alignment:
Q  147 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtat 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2915 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtat 2850  T

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Target: scaffold0337 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 15873 - 15808
Alignment:
Q  147 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtat 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15873 aggtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtat 15808  T

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Target: scaffold0337; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 16391 - 16314
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  16391 aaatattttgaggtaaattccattgtttggataatcatttgaagaatttttaaaatgatggaaatttataaagtattt 16314  T

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Target: scaffold0039 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 109067 - 109163
Alignment:
Q  117 ggaatgttttgagataatgtaaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||||||  ||| |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  109067 ggaatgttttgagggaatttaaatactttgatgtgaattccattgtttggataagaatttgaagaattttcaaaatgat-gaaatttataaagtattt 109163  T

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Target: scaffold0047 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 50324 - 50250
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagta 211  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  50324 aaatactttgatgtgaattccattgtttgaataataatttgaagagttttcaaaatgatggaaatttatgaagta 50250  T

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Target: scaffold0014 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 221213 - 221136
Alignment:
Q  137 aaatattttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||||| |||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  221213 aaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattt 221136  T

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Target: scaffold0014; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 223755 - 223689
Alignment:
Q  148 ggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    |||||||| |||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  223755 ggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattt 223689  T

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Target: scaffold0417 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 11966 - 11896
Alignment:
Q  144 ttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattt 214  Q
    ||||||| ||||||||||||||   |||||||||| ||| ||| ||||||||| |||||||||||||||||    
T  11966 ttgaggtaaattccattgtttgttaaataatttgatgaaattttaaaatgatgaaaatttatgaagtattt 11896  T

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