View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9922_7 (Length: 351)
Name: NF9922_7
Description: NF9922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9922_7 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 32855661 - 32855572
Alignment:
| Q |
262 |
acttatataacaatatacatgctttagtccactttataatacttgcttttatgaacataatatttttatattgatgtacaaggtttgaac |
351 |
Q |
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| T |
32855661 |
acttatataacaatatacatgctttagtccactttataatacttgcttttatgaacataatatttttatgttggtggacaaggtttgaac |
32855572 |
T |
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Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 25788892 - 25788965
Alignment:
| Q |
174 |
tattcccaagtgtttgacaaaaaggaatagtacactcagagtactaaatcttgctggaaacaagctcacaggtt |
247 |
Q |
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| T |
25788892 |
tatttccaagtgtttaataaaaaggaatagtacactcagagtactaaatcttgctggaaacaagctcacaggtt |
25788965 |
T |
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