View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9922_low_3 (Length: 330)
Name: NF9922_low_3
Description: NF9922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9922_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 88 - 315
Target Start/End: Original strand, 13571318 - 13571545
Alignment:
| Q |
88 |
tgacaaagaaggtaagtgggtacaaccacttacaagagttatcattcttcaattcttaccaaagaggtagaagttacattgacatgtcacgtgacaaaga |
187 |
Q |
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| T |
13571318 |
tgacaaagaaggtaagtgggtacaaccacttacaagagttatcattcttcaattcttaccaaagaggtagaagttacattgacatgtcacgtgacaaaga |
13571417 |
T |
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| Q |
188 |
aatatgtcatcttctttaagacaacacttgtcactttaatctatatttctcacgtttgagtatctatgcaatgagaatagaattaatagaaagaggatat |
287 |
Q |
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| T |
13571418 |
aatatgtcaccttctttaagacaacacttgtcactttaatctatatttctcacgtttgagtatctatgcaatgagaatagaattaatagaaagaggatat |
13571517 |
T |
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| Q |
288 |
tgttttaatataaagaaggtattgtttg |
315 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
13571518 |
tgttttaatataaagaaggtattgtttg |
13571545 |
T |
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