View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9923_6 (Length: 458)
Name: NF9923_6
Description: NF9923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9923_6 |
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Alignment Details
Target: chr8 (Bit Score: 376; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 14 - 429
Target Start/End: Original strand, 21130817 - 21131231
Alignment:
| Q |
14 |
atactaaactttatcttgttcttcatgcgaagttaaaaatctgacaaattgtttcttgtgcaggtagtcgagcgcatcaaaaagtattttgatctattag |
113 |
Q |
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| T |
21130817 |
atactaaactttatcttgttcttcatgcgaagttaaaaatctgacaaattgtttcttgtgcaggtagttgagcgcatcaaaaagtattttgatctattag |
21130916 |
T |
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| Q |
114 |
gaggcccggctacctttatcctgggtagataattctatattctcaaggagacaaatggattcatgtgttataatttcgaagctaactgaagcaactaaca |
213 |
Q |
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| T |
21130917 |
gaggcccggctacctttatccagg-tatctaattctatattctcaaggagacaaatggattcatgtgttataatttcgaagctaactgaagcaactaaca |
21131015 |
T |
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| Q |
214 |
caaaaatagaaaagaaagcaagaaaagacatttactttcggatgatgataaatagacctctaagcatgaaacaatgaaaccctaaagaactccatatcag |
313 |
Q |
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||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
21131016 |
caaaaatagaaaagaaagcaagaaaagacattttctttcggacgatgataaatagacctctaagcatgaaacaatgaaaccctaaagaacaccatatcag |
21131115 |
T |
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| Q |
314 |
actagatttatctcttaaccagaagcatttttactgacaaaatattcaactgtgtatagagctcaatacattagtcctttaaatgcaacattcatatatc |
413 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
21131116 |
actagatttatctcttaaccagaagcatttttactgacaaaatattcaactgtgtatagagctcaatacattagtcctttaaatgcaacattcatatttc |
21131215 |
T |
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| Q |
414 |
agaactttgtcttgtt |
429 |
Q |
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| T |
21131216 |
agaactttgtcttgtt |
21131231 |
T |
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