View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9925_low_16 (Length: 315)
Name: NF9925_low_16
Description: NF9925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9925_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 14 - 301
Target Start/End: Original strand, 37832104 - 37832391
Alignment:
| Q |
14 |
cattaatcattcttgtatggaccagaaggattaaatgttgttatcttctgttctagtacttcaacattgatgatttaaattttccttcttttgaaatgct |
113 |
Q |
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| T |
37832104 |
cattaatcattcttgtatggaccagaaggattaaatgttgttatcttctgttctagtacttcaacattgatgatttaaattttccttcttttgaaatgct |
37832203 |
T |
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| Q |
114 |
tctcttgtatcatagtagtatgagcaacattggttccgttggttttttcactttccaagcttagaaaattttcgtctaacacattaaccggtgtgcctga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37832204 |
tctcttgtatcatagtagtatgagcaacattggttccgttggttttttcactttccaagcttagaaaattttcgtctaacacattaaccggtgtgcctga |
37832303 |
T |
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| Q |
214 |
acttgaatgcacattaaacatggactcatactcctccttcgctatatcttgtattacattatagcactccataacactttcctgcacc |
301 |
Q |
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| T |
37832304 |
acttgaatgcacattaaacatggactcatactcctccttcgctatatcttgtattacattatagcactccataacactttcctgcacc |
37832391 |
T |
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