View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9926_high_11 (Length: 361)
Name: NF9926_high_11
Description: NF9926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9926_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 20 - 351
Target Start/End: Complemental strand, 34860261 - 34859930
Alignment:
| Q |
20 |
agtactacataactttgtttgcacttgttgtattgaatgtcattcattacaagaatcaaatatttgcaagtcattggatttagactatgcttaaaactga |
119 |
Q |
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| T |
34860261 |
agtactacataactttgtttgcacttgttgtattgaatgtcattcattacaagaatcaaatatttgcaagtcattggatttagactatgcttaaaactga |
34860162 |
T |
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| Q |
120 |
tatcatatttcggaagctggaatggactgtgattataggttccttctcatgtgctgatgatagcgctacttttcccgttacttcacttgaggatgctcgt |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34860161 |
tatcatatttcggaagctggaatggactgtgattataggttccttctcatgtgctgatgatagcgctacttttcccgttacttcacttgaggatgctcgt |
34860062 |
T |
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| Q |
220 |
agaattccataggatctattgtctcttatgtgtaggtgcatatctgaaactcaccagatgtgtgttactccaacggagttcatacgtaggaagctagatg |
319 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34860061 |
agaattccataggatctattgtcgcttatgtgtaggtgcatatctgaaactcaccagatgtgtgttactccaacggagttcatacgtaggaagctagatg |
34859962 |
T |
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| Q |
320 |
tttttgaagatccttattgctcgtcttctgtg |
351 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
34859961 |
tttttgaagatccttattgctcgtcttctgtg |
34859930 |
T |
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