View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9926_high_16 (Length: 313)
Name: NF9926_high_16
Description: NF9926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9926_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 27702252 - 27702545
Alignment:
| Q |
1 |
tgaataaccattttgttgatcagaagaatctttaggatcatccaatgatgaatgaaaatcttctttgaatgttgaagctcttgatatgccttgtcttctt |
100 |
Q |
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|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27702252 |
tgaataactattttgttgatcagaa---tctttaggatcatccaatgatgaatgaaaatcttctttgaatgttgaagctcttgatatgccttgtcttctt |
27702348 |
T |
|
| Q |
101 |
ctatacgccatcttttcttttgcttccaaaacctgattgccttnnnnnnnnnnnnnnnnnnnnntatcccnnnnnnncaagcaaaagtgtctgattatca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |
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| T |
27702349 |
ctatacgccatcttttcttttgcttccaaaacctgattgccttagagagatagagagagagagatatcccaaaaaaacaagcaaaagtgtctgattatca |
27702448 |
T |
|
| Q |
201 |
ttcaacttctacctaaccaactctttccgtttttatcgttttttaggggtcatgaaatgaaatatcaacctaaaatatgtataaagtacattaatta |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
27702449 |
ttcaacttctacctaaccaactctttccgtttttatcgttttttaggggtcatgaaatgaaatatcaaccttaaatatgtataaagtacattaatta |
27702545 |
T |
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