View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9926_low_26 (Length: 258)
Name: NF9926_low_26
Description: NF9926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9926_low_26 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 37783524 - 37783764
Alignment:
| Q |
18 |
gcatatatgcagtgctttggagtaagaacaaagaaatgaaaaagaagaataaatcatcatctttagaaatcaacatggagaataaacctgagttcgttat |
117 |
Q |
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| T |
37783524 |
gcatatatgcagtactttggagtaagaacaaagaaatgaaaaagaagaataaatcatcatctttagaaatcaacatggagaataaacctgagttcgttat |
37783623 |
T |
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| Q |
118 |
acccaatcctaacaaatgaaagagaaattatatccttatcattttacactaatatattagtatagatacgtatatacacatatatgaaagtgcgagaaat |
217 |
Q |
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| T |
37783624 |
acccagtcctaacaaatgaaagagaaattatatccttatcattttacactaatatattagtatagatacgtatatacacatatatgaaagtgcgagaaat |
37783723 |
T |
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| Q |
218 |
aaacataagacacggagagtttgttgtatgcaaaattcttt |
258 |
Q |
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| T |
37783724 |
aaacataagacacggagagtttgttgtatgcaaaattcttt |
37783764 |
T |
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