View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9928_low_6 (Length: 239)
Name: NF9928_low_6
Description: NF9928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9928_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 46773067 - 46773289
Alignment:
| Q |
1 |
aagttgtggtgctacgaggacttagattaactccagaaaccagctttgttccaccggccacagtgaattgaagttcttgtaaccgatccatgcactgatc |
100 |
Q |
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| T |
46773067 |
aagttgtggtgctacgaggacttagattaactccagaaaccagctttgttccaccggccacagtgaattgaagttcttgtaaccgatccatgcactgatc |
46773166 |
T |
|
| Q |
101 |
caccttcaaaagaatcataacaattaaaatataattcaggtaattagaaatggattaaggaaaatgaaaataccttgttcagtgtttgtctgataagaat |
200 |
Q |
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| T |
46773167 |
caccttcaaaagaatcataacaatt-aaatataattcaggtaattagaaatggattaaggaaaatgaaaataccttgttgagtgtttgtctgataagaat |
46773265 |
T |
|
| Q |
201 |
aggatttagaacagctaacatgtt |
224 |
Q |
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||||||||||||||||||||||| |
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| T |
46773266 |
tggatttagaacagctaacatgtt |
46773289 |
T |
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