View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9928_low_7 (Length: 238)
Name: NF9928_low_7
Description: NF9928
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9928_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 48373199 - 48373368
Alignment:
| Q |
54 |
tgagcataatagatactcgttcataacaagactatctcataaattttgaagttattctcagtctctcactttacatcggtcaaaatacacttatcaaatt |
153 |
Q |
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| T |
48373199 |
tgagcacaatagatactcgttcataacaagactatctcataaattttgaggttattcccagtcgctcactttacatcggtcaaaatacacttatcaaatt |
48373298 |
T |
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| Q |
154 |
ttcaaataaaatacactatagaaagcttgttctggtaaaaagctgcatttttagggtgtattgacgaaaa |
223 |
Q |
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||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| |
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| T |
48373299 |
ttcaaataaaatacactatcgaaagcttgttccagtaaaaagctgcattttcagggtgtattgacgaaaa |
48373368 |
T |
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