View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9930_high_28 (Length: 209)

Name: NF9930_high_28
Description: NF9930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9930_high_28
NF9930_high_28
[»] chr7 (37 HSPs)
chr7 (18-193)||(46578086-46578257)
chr7 (99-178)||(34978323-34978402)
chr7 (102-185)||(48062086-48062169)
chr7 (104-198)||(41189489-41189583)
chr7 (148-187)||(10700142-10700181)
chr7 (148-183)||(31445393-31445428)
chr7 (99-178)||(12007151-12007230)
chr7 (102-185)||(34507164-34507247)
chr7 (104-187)||(38939936-38940019)
chr7 (104-186)||(24532900-24532982)
chr7 (99-185)||(27568044-27568130)
chr7 (152-185)||(30941469-30941502)
chr7 (148-185)||(35822933-35822970)
chr7 (102-184)||(41430111-41430193)
chr7 (151-183)||(32952411-32952443)
chr7 (99-178)||(13152619-13152699)
chr7 (148-179)||(33057455-33057486)
chr7 (148-183)||(35072323-35072358)
chr7 (148-183)||(35098664-35098699)
chr7 (102-178)||(40854620-40854696)
chr7 (102-178)||(43025369-43025445)
chr7 (102-198)||(44895518-44895614)
chr7 (114-178)||(45420026-45420090)
chr7 (150-192)||(18505851-18505893)
chr7 (148-198)||(22918115-22918165)
chr7 (154-188)||(35207582-35207616)
chr7 (152-198)||(38073299-38073345)
chr7 (148-198)||(38956564-38956614)
chr7 (148-177)||(4292503-4292532)
chr7 (148-181)||(19643397-19643430)
chr7 (102-184)||(42584832-42584914)
chr7 (150-198)||(24614262-24614310)
chr7 (153-185)||(34108817-34108849)
chr7 (148-184)||(36352544-36352580)
chr7 (100-140)||(39332013-39332053)
chr7 (101-198)||(41018692-41018789)
chr7 (149-197)||(47391272-47391320)
[»] chr8 (37 HSPs)
chr8 (99-198)||(10731572-10731671)
chr8 (99-198)||(10902731-10902830)
chr8 (104-197)||(36660397-36660490)
chr8 (104-184)||(45405563-45405643)
chr8 (99-178)||(2730926-2731005)
chr8 (102-181)||(25987749-25987828)
chr8 (99-177)||(44825469-44825547)
chr8 (102-179)||(7777144-7777221)
chr8 (102-185)||(6440111-6440194)
chr8 (150-184)||(39856115-39856149)
chr8 (100-187)||(44064385-44064472)
chr8 (104-178)||(10692470-10692544)
chr8 (149-198)||(13106556-13106605)
chr8 (148-181)||(44090962-44090995)
chr8 (150-198)||(11253488-11253536)
chr8 (100-140)||(12783794-12783834)
chr8 (99-184)||(24798317-24798402)
chr8 (102-199)||(34186636-34186733)
chr8 (148-184)||(37133822-37133858)
chr8 (114-198)||(5277445-5277529)
chr8 (102-198)||(27325787-27325883)
chr8 (151-198)||(29025338-29025385)
chr8 (151-198)||(32501142-32501189)
chr8 (102-178)||(35067190-35067266)
chr8 (148-199)||(36816561-36816612)
chr8 (102-185)||(25830204-25830287)
chr8 (148-178)||(33451529-33451559)
chr8 (152-182)||(41639759-41639789)
chr8 (116-198)||(4054232-4054314)
chr8 (148-181)||(5600949-5600982)
chr8 (148-181)||(5639638-5639671)
chr8 (148-181)||(10592243-10592276)
chr8 (107-181)||(44061752-44061826)
chr8 (107-184)||(2621820-2621897)
chr8 (150-182)||(32954918-32954950)
chr8 (99-184)||(37942866-37942951)
chr8 (100-140)||(45529249-45529289)
[»] chr3 (56 HSPs)
chr3 (99-199)||(42358583-42358683)
chr3 (114-198)||(55361179-55361263)
chr3 (99-185)||(6178384-6178470)
chr3 (103-181)||(9692756-9692834)
chr3 (104-198)||(33939267-33939363)
chr3 (102-198)||(35597191-35597287)
chr3 (102-198)||(41505520-41505616)
chr3 (104-199)||(37503692-37503787)
chr3 (148-198)||(55151663-55151713)
chr3 (99-181)||(4494199-4494281)
chr3 (102-199)||(37302575-37302672)
chr3 (102-198)||(5114107-5114203)
chr3 (102-198)||(5244258-5244354)
chr3 (114-186)||(28700502-28700574)
chr3 (148-198)||(20547936-20547986)
chr3 (148-198)||(41309192-41309242)
chr3 (148-198)||(52254084-52254134)
chr3 (107-181)||(288760-288834)
chr3 (104-178)||(26550269-26550343)
chr3 (108-198)||(38926663-38926753)
chr3 (148-185)||(50314700-50314737)
chr3 (99-184)||(6093838-6093923)
chr3 (148-184)||(48346902-48346938)
chr3 (102-178)||(14207223-14207299)
chr3 (102-178)||(14214971-14215047)
chr3 (107-175)||(34064074-34064142)
chr3 (154-185)||(35299833-35299864)
chr3 (102-198)||(35377027-35377123)
chr3 (102-178)||(36670980-36671056)
chr3 (148-179)||(39714001-39714032)
chr3 (102-198)||(44855982-44856078)
chr3 (102-198)||(45711385-45711481)
chr3 (102-198)||(46623936-46624032)
chr3 (102-178)||(52714763-52714839)
chr3 (148-182)||(19150281-19150315)
chr3 (148-198)||(24256717-24256767)
chr3 (102-173)||(26452693-26452764)
chr3 (148-198)||(27541448-27541498)
chr3 (152-198)||(42357030-42357076)
chr3 (102-185)||(45186510-45186593)
chr3 (102-177)||(48353026-48353101)
chr3 (148-198)||(52939726-52939776)
chr3 (156-185)||(3518566-3518595)
chr3 (148-185)||(8502849-8502886)
chr3 (148-181)||(31104740-31104773)
chr3 (148-181)||(32145948-32145981)
chr3 (148-185)||(34456866-34456903)
chr3 (148-185)||(37894200-37894237)
chr3 (102-184)||(39629798-39629880)
chr3 (148-185)||(51982174-51982211)
chr3 (154-182)||(1340143-1340171)
chr3 (100-140)||(30909057-30909097)
chr3 (150-178)||(36756016-36756044)
chr3 (104-140)||(42672268-42672304)
chr3 (150-198)||(50876308-50876356)
chr3 (150-178)||(54260169-54260197)
[»] chr2 (40 HSPs)
chr2 (99-199)||(19642624-19642724)
chr2 (99-185)||(44977458-44977544)
chr2 (102-198)||(9990720-9990816)
chr2 (104-183)||(1907724-1907803)
chr2 (148-198)||(9647207-9647257)
chr2 (99-198)||(41195610-41195709)
chr2 (150-199)||(19109038-19109087)
chr2 (125-198)||(3838826-3838899)
chr2 (102-198)||(9207619-9207715)
chr2 (101-181)||(31578463-31578543)
chr2 (114-198)||(42091450-42091534)
chr2 (148-198)||(2076644-2076694)
chr2 (148-198)||(7664012-7664062)
chr2 (102-185)||(14328411-14328494)
chr2 (152-198)||(37737917-37737963)
chr2 (102-185)||(39147795-39147878)
chr2 (102-197)||(41042283-41042378)
chr2 (149-182)||(14871715-14871748)
chr2 (104-198)||(43487410-43487504)
chr2 (104-185)||(4657333-4657414)
chr2 (150-198)||(27490676-27490724)
chr2 (102-185)||(12070879-12070960)
chr2 (102-178)||(18254175-18254251)
chr2 (114-174)||(36774580-36774640)
chr2 (148-182)||(7258523-7258557)
chr2 (148-178)||(11965869-11965899)
chr2 (156-198)||(22445970-22446012)
chr2 (148-198)||(23690454-23690504)
chr2 (148-198)||(32477407-32477457)
chr2 (148-178)||(34945056-34945086)
chr2 (148-185)||(3771447-3771484)
chr2 (104-178)||(7698202-7698276)
chr2 (148-185)||(10216925-10216962)
chr2 (149-178)||(19843561-19843590)
chr2 (99-140)||(22525997-22526038)
chr2 (148-181)||(32944466-32944499)
chr2 (148-181)||(37316777-37316810)
chr2 (99-184)||(5427182-5427267)
chr2 (150-182)||(6511518-6511550)
chr2 (99-184)||(8427579-8427664)
[»] chr5 (32 HSPs)
chr5 (66-198)||(41321252-41321380)
chr5 (148-196)||(2972399-2972447)
chr5 (150-197)||(8097329-8097376)
chr5 (148-198)||(18660834-18660884)
chr5 (102-197)||(19521950-19522045)
chr5 (99-184)||(1274384-1274469)
chr5 (99-187)||(4719677-4719765)
chr5 (114-178)||(5168224-5168288)
chr5 (114-198)||(33037561-33037645)
chr5 (148-198)||(7076514-7076564)
chr5 (99-198)||(13309909-13310008)
chr5 (99-181)||(13089744-13089826)
chr5 (104-182)||(35567532-35567610)
chr5 (99-185)||(20770158-20770243)
chr5 (150-186)||(29463073-29463109)
chr5 (148-184)||(33958219-33958255)
chr5 (109-198)||(36738984-36739073)
chr5 (102-198)||(1079898-1079994)
chr5 (102-178)||(28306098-28306174)
chr5 (107-178)||(884476-884547)
chr5 (148-178)||(12739848-12739878)
chr5 (148-178)||(12802671-12802701)
chr5 (102-185)||(22098285-22098368)
chr5 (148-198)||(35646458-35646508)
chr5 (148-178)||(39054662-39054692)
chr5 (148-181)||(16972062-16972095)
chr5 (148-185)||(36563011-36563048)
chr5 (100-140)||(5042276-5042316)
chr5 (102-175)||(5721786-5721859)
chr5 (148-184)||(27487962-27487998)
chr5 (148-176)||(39195793-39195821)
chr5 (148-184)||(42643170-42643206)
[»] chr4 (51 HSPs)
chr4 (102-185)||(42853606-42853689)
chr4 (99-185)||(336766-336852)
chr4 (102-198)||(46634129-46634225)
chr4 (100-184)||(52895255-52895339)
chr4 (148-198)||(37997329-37997379)
chr4 (99-178)||(38519820-38519899)
chr4 (99-182)||(50831717-50831800)
chr4 (148-197)||(39440559-39440608)
chr4 (99-185)||(50890032-50890118)
chr4 (102-198)||(10250461-10250557)
chr4 (148-187)||(19232090-19232129)
chr4 (148-187)||(52204926-52204965)
chr4 (99-178)||(2738233-2738312)
chr4 (148-198)||(10474058-10474108)
chr4 (148-198)||(11068763-11068813)
chr4 (148-182)||(16019552-16019586)
chr4 (152-198)||(39654903-39654949)
chr4 (99-178)||(51255773-51255852)
chr4 (99-181)||(149447-149529)
chr4 (154-187)||(24045324-24045357)
chr4 (148-197)||(24575798-24575847)
chr4 (102-196)||(37297078-37297172)
chr4 (114-179)||(5386414-5386479)
chr4 (99-185)||(28458336-28458421)
chr4 (104-181)||(40348825-40348902)
chr4 (148-183)||(7632422-7632457)
chr4 (150-185)||(9393843-9393878)
chr4 (148-187)||(14113570-14113609)
chr4 (102-178)||(26910231-26910307)
chr4 (150-185)||(31574898-31574933)
chr4 (102-198)||(43175013-43175109)
chr4 (99-167)||(54000725-54000793)
chr4 (154-184)||(11672083-11672113)
chr4 (114-181)||(18315979-18316046)
chr4 (102-184)||(29175256-29175336)
chr4 (158-188)||(35897786-35897816)
chr4 (102-185)||(44257688-44257771)
chr4 (148-198)||(50608570-50608620)
chr4 (148-178)||(51577690-51577720)
chr4 (148-181)||(1816638-1816671)
chr4 (148-181)||(29227205-29227238)
chr4 (107-185)||(42959306-42959384)
chr4 (148-185)||(48796491-48796528)
chr4 (148-185)||(49896625-49896662)
chr4 (108-185)||(5249904-5249981)
chr4 (100-169)||(21025629-21025698)
chr4 (154-198)||(26492088-26492132)
chr4 (150-178)||(42396003-42396031)
chr4 (104-185)||(49585026-49585107)
chr4 (104-185)||(53573509-53573590)
chr4 (154-198)||(53801705-53801749)
[»] chr1 (39 HSPs)
chr1 (148-198)||(15082996-15083046)
chr1 (102-198)||(649798-649894)
chr1 (99-198)||(44519097-44519196)
chr1 (99-182)||(50775118-50775201)
chr1 (99-185)||(4466721-4466807)
chr1 (99-185)||(9566919-9567005)
chr1 (148-197)||(35369775-35369824)
chr1 (99-181)||(48858850-48858932)
chr1 (99-183)||(9987978-9988062)
chr1 (99-199)||(18434821-18434921)
chr1 (102-178)||(49570026-49570102)
chr1 (100-187)||(18954257-18954343)
chr1 (99-198)||(19055705-19055804)
chr1 (114-197)||(33100849-33100932)
chr1 (107-198)||(37619578-37619669)
chr1 (148-198)||(45333786-45333836)
chr1 (99-187)||(47721436-47721523)
chr1 (99-187)||(47728428-47728515)
chr1 (148-198)||(48261215-48261265)
chr1 (148-198)||(49065310-49065360)
chr1 (152-198)||(50932383-50932429)
chr1 (105-198)||(26469391-26469484)
chr1 (105-198)||(51718572-51718665)
chr1 (112-184)||(14983812-14983884)
chr1 (114-198)||(23645452-23645536)
chr1 (148-199)||(37274978-37275029)
chr1 (99-184)||(49647110-49647194)
chr1 (148-198)||(51571292-51571342)
chr1 (148-185)||(8828080-8828117)
chr1 (156-197)||(26208180-26208221)
chr1 (148-185)||(41070898-41070935)
chr1 (107-181)||(47642569-47642643)
chr1 (103-185)||(49446756-49446838)
chr1 (154-198)||(37685410-37685454)
chr1 (154-198)||(37700064-37700108)
chr1 (150-198)||(44914518-44914566)
chr1 (150-182)||(45065863-45065895)
chr1 (148-184)||(51080050-51080086)
chr1 (104-185)||(52437526-52437607)
[»] chr6 (27 HSPs)
chr6 (102-199)||(22079508-22079605)
chr6 (102-198)||(5694097-5694193)
chr6 (99-182)||(31883265-31883348)
chr6 (99-177)||(8505740-8505818)
chr6 (108-198)||(15974643-15974733)
chr6 (148-184)||(3853267-3853303)
chr6 (114-198)||(552834-552918)
chr6 (99-183)||(17551339-17551423)
chr6 (148-198)||(26595424-26595474)
chr6 (99-173)||(8645335-8645409)
chr6 (156-197)||(13689941-13689982)
chr6 (102-198)||(5080513-5080609)
chr6 (99-178)||(5522605-5522682)
chr6 (102-178)||(25811804-25811880)
chr6 (154-184)||(277072-277102)
chr6 (148-198)||(20998091-20998141)
chr6 (148-185)||(255080-255117)
chr6 (154-183)||(4820448-4820477)
chr6 (148-181)||(8098560-8098593)
chr6 (104-178)||(28630130-28630204)
chr6 (100-174)||(32459486-32459560)
chr6 (150-187)||(33195276-33195313)
chr6 (148-184)||(6271425-6271461)
chr6 (104-185)||(16368005-16368086)
chr6 (99-183)||(24900802-24900884)
chr6 (150-178)||(28748190-28748218)
chr6 (107-184)||(30956106-30956183)
[»] scaffold0432 (1 HSPs)
scaffold0432 (102-181)||(6482-6561)
[»] scaffold0343 (1 HSPs)
scaffold0343 (148-186)||(8915-8953)
[»] scaffold0053 (1 HSPs)
scaffold0053 (102-185)||(12527-12610)
[»] scaffold0618 (1 HSPs)
scaffold0618 (148-181)||(8915-8948)
[»] scaffold0056 (1 HSPs)
scaffold0056 (104-198)||(76565-76659)
[»] scaffold0519 (1 HSPs)
scaffold0519 (150-198)||(11859-11907)
[»] scaffold0201 (1 HSPs)
scaffold0201 (102-181)||(8502-8581)
[»] scaffold0002 (1 HSPs)
scaffold0002 (99-185)||(469596-469682)


Alignment Details
Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 46578257 - 46578086
Alignment:
Q  18 ataatgagattgaagattgttattcatgatcatcataaatcaatctagaaaagagaaatgatatatgaacaat--tttgaagattgacaatttttgtaac 115  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||  |||     ||||||| |||||||||    
T  46578257 ataatgagattgaagattgttattcatgatcatgagaaatcaatctagaaaa-agaaatgatatatgtacaatcattt-----ttgacaacttttgtaac 46578164  T
Q  116 aactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttc 193  Q
    || ||||||||| ||||||||||||       ||||||||||||||||| ||||||||||||| |||||| |||||||    
T  46578163 aattttatctctcatattcacattatcattttactttctctctctattgatttgatttttgtgccaatacctcgtttc 46578086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 34978323 - 34978402
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||    
T  34978323 ttgacaatttttgtgacaactttctctctcatactcacattatccttttactttctctctctattgctttgttttttgtg 34978402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 48062086 - 48062169
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| ||||||||||||||| ||||||||| ||| ||||       ||||||||||||||||| |||| |||||||||||||||    
T  48062086 acaacttttgtaacaactttctctcttatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatac 48062169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 41189583 - 41189489
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||| |||||||| | ||| ||| ||||||||       |||||||||||||||||||||  ||||||||||||||| || |||||||||    
T  41189583 aatttttgtgacaactttctttctcatactcacattatctttttactttctctctctattgctttagtttttgtgtcaatacctcatttcctttg 41189489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 10700181 - 10700142
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  10700181 actttctctctctattgctttgatttttgtgtcaagactt 10700142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 31445393 - 31445428
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  31445393 actttctctctctattgctttgatttttgtgtcaat 31445428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 12007230 - 12007151
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||| |||||| |||||||| ||||| ||| |||||| |       |||||||||||||||||||||||||||||||    
T  12007230 ttgacaacttttgtgacaactttctctctcatactcacatgatcattctactttctctctctattgctttgatttttgtg 12007151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 34507247 - 34507164
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| |||||| ||||| |||||||  ||| ||||||||       ||||||||||||||||||||||||||| ||||||||||    
T  34507247 acaacttttgtgacaaccttatctcccatactcacattatatttttactttctctctctattgctttgattttcgtgtcaatac 34507164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 38940019 - 38939936
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatactt 187  Q
    |||||||||||||| ||| ||||||||| ||| ||||       ||||| ||||||||||||||||||||| ||||| ||||||    
T  38940019 aatttttgtaacaattttttctcttatactcatattatgtttttactttatctctctattgctttgattttcgtgtctatactt 38939936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 24532982 - 24532900
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatact 186  Q
    ||||||||| |||| ||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||||| ||||    
T  24532982 aatttttgtgacaattttttctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtcattact 24532900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 27568044 - 27568130
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| |||||| |||||||||| ||| ||| ||| ||||       ||||||||||||||||| |||| |||||||||||||||    
T  27568044 ttgacaacttttgtgacaactttatttctcatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatac 27568130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 30941469 - 30941502
Alignment:
Q  152 tctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||||||||||||||||||||||||||    
T  30941469 tctctctctattgctttgatttttgtgtcaatac 30941502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 35822970 - 35822933
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  35822970 actttctctctctattgctttgatttttgtgccaatac 35822933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 41430193 - 41430111
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||| |||||| |||||||| ||||||||| ||||||||       ||||| |||||||||||||||| |||| |||||||||    
T  41430193 acaacttttgtgacaactttctctcttatactcacattatatttttactttatctctctattgctttggttttcgtgtcaata 41430111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 32952443 - 32952411
Alignment:
Q  151 ttctctctctattgctttgatttttgtgtcaat 183  Q
    |||||||||||||||||||||||||||||||||    
T  32952443 ttctctctctattgctttgatttttgtgtcaat 32952411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 13152619 - 13152699
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgc-tttgatttttgtg 178  Q
    ||||||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||| |||||||||||||    
T  13152619 ttgacaacttttgtgacaactttctctctcatactcacattatccttttactttctctctctattgcttttgatttttgtg 13152699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 179
Target Start/End: Original strand, 33057455 - 33057486
Alignment:
Q  148 actttctctctctattgctttgatttttgtgt 179  Q
    ||||||||||||||||||||||||||||||||    
T  33057455 actttctctctctattgctttgatttttgtgt 33057486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 35072358 - 35072323
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35072358 actttctctttctattgctttgatttttgtgtcaat 35072323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 35098699 - 35098664
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35098699 actttctctttctattgctttgatttttgtgtcaat 35098664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 40854696 - 40854620
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||| ||| ||||| ||| ||||||||       |||||||||||||||||||||||||||||||    
T  40854696 acaacttttgtgacaattttctctctcatactcacattatatttttactttctctctctattgctttgatttttgtg 40854620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 43025369 - 43025445
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||||||| |||||||||||||| ||| ||| ||||       ||||| |||||||||||||||| ||||||||    
T  43025369 acaatttttgtgacaactttatctctcatactcatattatctttttactttttctctctattgctttggtttttgtg 43025445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 44895614 - 44895518
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| | ||| |||||||| |||       |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  44895614 acaacttttgtgacaactttctatctcatattcacgttatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttg 44895518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 45420090 - 45420026
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||||||| ||||| ||||||||||||       ||||||||||||||||| |||||||||||||    
T  45420090 acaactttctctctcatattcacattatcattttactttctctctctattgttttgatttttgtg 45420026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 18505851 - 18505893
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgttt 192  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||    
T  18505851 tttctctctctattgttttgatttttgtatcaatacctcgttt 18505893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 22918165 - 22918115
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  22918165 actttctctctctattgctttggtttttgtgccactacctcatttcctttg 22918115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 35207582 - 35207616
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaatacttc 188  Q
    |||||||||||||||||| ||||||||||||||||    
T  35207582 tctctctattgctttgatatttgtgtcaatacttc 35207616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 38073299 - 38073345
Alignment:
Q  152 tctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||| |||||||| |||||| || |||||||||    
T  38073299 tctctctctattgctttggtttttgtgccaatacctcatttcctttg 38073345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 38956614 - 38956564
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  38956614 actttctctctctattgctttgttttttgtgccactacctcatttcctttg 38956564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 177
Target Start/End: Original strand, 4292503 - 4292532
Alignment:
Q  148 actttctctctctattgctttgatttttgt 177  Q
    ||||||||||||||||||||||||||||||    
T  4292503 actttctctctctattgctttgatttttgt 4292532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 19643430 - 19643397
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||| ||||||||||||||||||||||||||||    
T  19643430 actttatctctctattgctttgatttttgtgtca 19643397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 42584832 - 42584914
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       ||||| ||||||||||||||||||| | |||||||||    
T  42584832 acaacttttgtgacaactttctctctcatactcacattatatttttactttatctctctattgctttgattctcgtgtcaata 42584914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 24614310 - 24614262
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||| ||||||||||||| ||||||||||| ||| || |||||||||    
T  24614310 tttctcactctattgctttggtttttgtgtcactacctcatttcctttg 24614262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 34108849 - 34108817
Alignment:
Q  153 ctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||| |||||||||||||||||||||||    
T  34108849 ctctctctactgctttgatttttgtgtcaatac 34108817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 36352580 - 36352544
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  36352580 actttatctctctattgctttgattttcgtgtcaata 36352544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 39332013 - 39332053
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacatta 140  Q
    |||||| ||||||||||||||| ||||||||| ||||||||    
T  39332013 tgacaacttttgtaacaactttctctcttatactcacatta 39332053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 41018692 - 41018789
Alignment:
Q  101 gacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||| |||||| |||||||| | ||| ||| ||||||||       |||||||||||||||| ||||| ||||||||| ||||| || ||| |||||    
T  41018692 gacaacttttgtgacaactttctatctcatactcacattatatttttactttctctctctattactttggtttttgtgttaatacctctttttctttg 41018789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 47391320 - 47391272
Alignment:
Q  149 ctttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||| ||||| ||||| ||||||||||||||||||| ||| ||||||||    
T  47391320 ctttttctctttattgttttgatttttgtgtcaatatttcatttccttt 47391272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 8e-23; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 10731572 - 10731671
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||| ||||||||||||||| ||| ||||| ||| ||||       ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10731572 ttgacaacttttgtaacaactttctcttttatactcatattatctttttactttctctctctattgctttgatttttgtgtcaatacttcatttcctttg 10731671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 10902731 - 10902830
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||||||||||||||| ||||| | | ||||||||       ||||||||||||||||||||||||||||||| |||||| || ||| |||||    
T  10902731 ttgataatttttgtaacaactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgccaatacatcattttctttg 10902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 36660490 - 36660397
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||||||||||||||||| ||||| ||| | ||||||       |||||||||||||||||||||| || ||||||||||||||| ||| ||||    
T  36660490 aatttttgtaacaactttctctctcatacttacattatctttttactttctctctctattgctttggttattgtgtcaatacttcattttcttt 36660397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 45405563 - 45405643
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||||| |||||||| ||| | ||||||||||||       ||||||||||||||||||||||||||| |||||||||    
T  45405563 aatttttgtgacaactttttctttcatattcacattatatttttactttctctctctattgctttgattttcgtgtcaata 45405643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 2731005 - 2730926
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||       |||||||||||| | ||||||||||||||||    
T  2731005 ttgacaacttttgtaacaactttctctctcatattcacattatctttttactttctctctcaactgctttgatttttgtg 2730926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 25987828 - 25987749
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||| |||||| |||||||||||||| ||| ||||||||       ||||| ||||||||||||||||||||||||||||    
T  25987828 acaacttttgtgacaactttatctctcatactcacattatcattctactttatctctctattgctttgatttttgtgtca 25987749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 44825469 - 44825547
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgt 177  Q
    ||||||| |||||| |||| ||||||||| ||| ||||||||       ||||||||||||||||||||||||||||||    
T  44825469 ttgacaacttttgtgacaattttatctctcatactcacattatttatctactttctctctctattgctttgatttttgt 44825547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 7777221 - 7777144
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgt 179  Q
    ||||||||||| |||||||| ||||||||| ||||||||       |||||||||||||||| ||||||| |||||||    
T  7777221 acaatttttgtgacaactttctctcttatactcacattatatttttactttctctctctattactttgatatttgtgt 7777144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 6440111 - 6440194
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       ||||||||||| | ||||||||||||||||||||||||    
T  6440111 acaacttttgtgacaactttctctctcatactcacattatatttttactttctctctttcttgctttgatttttgtgtcaatac 6440194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 39856115 - 39856149
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||||||||||||||||    
T  39856115 tttctctctctattgctttgatttttgtgtcaata 39856149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 44064385 - 44064472
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||||||||||||||| || ||| | ||| |||||| |       | ||||||||||||||||||||||||||||||||| ||||    
T  44064385 tgacaatttttgtaacaaccttctctttcatactcacatcatattctcattttctctctctattgctttgatttttgtgtcaagactt 44064472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 10692470 - 10692544
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||||| |||||||||||||| ||| ||||||||       ||||||||||||||||| |||| ||||||||    
T  10692470 aatttttgtgacaactttatctctcatactcacattatctttttactttctctctctattgttttggtttttgtg 10692544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 13106556 - 13106605
Alignment:
Q  149 ctttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  13106556 ctttctctctctattgctttgctttttgtgtcaatacctctttttctttg 13106605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 44090962 - 44090995
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||||||||||||||||||||||||||||    
T  44090962 actttctctctctattgctttgatttttgtgtca 44090995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 11253536 - 11253488
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  11253536 tttctctctctattgctttggtttttgtgtcaatacctcattttctttg 11253488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 12783794 - 12783834
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacatta 140  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  12783794 tgacaatttttgtgacaactttatctcttttattcacatta 12783834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 24798402 - 24798317
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||| |||||||||| ||||| ||| ||||||||       ||||||||| ||||||| |||||||||| | ||||||    
T  24798402 ttgacaatttttttaacaactttctctctcatactcacattatatttttactttctctttctattgttttgatttttatatcaata 24798317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 34186636 - 34186733
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttgc 199  Q
    |||| |||||| |||||||| ||| ||||| ||||||||       | |||||||||||||| ||||| ||||||||||| ||| || ||||||||||    
T  34186636 acaacttttgtgacaactttctcttttatactcacattatctttttattttctctctctattactttggtttttgtgtcactacctcatttcctttgc 34186733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 37133858 - 37133822
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||||| |||||||||||||||||||||||||||    
T  37133858 actttctctttctattgctttgatttttgtgtcaata 37133822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 5277529 - 5277445
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||| ||| ||||||||       ||||||||||||||||||||   ||||||||||| ||| || |||||||||    
T  5277529 acaactttatctctcatactcacattatctttttactttctctctctattgcttaagtttttgtgtcactacctcatttcctttg 5277445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 27325787 - 27325883
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| ||| |||||| |       |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  27325787 acaacttttgtgacaactttctctctcatactcacatgatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttg 27325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 29025338 - 29025385
Alignment:
Q  151 ttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  29025338 ttctctctctattgctttggtttttgtgtcaatacctcattttctttg 29025385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 32501189 - 32501142
Alignment:
Q  151 ttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||||| ||||||||||||||||| ||| || |||||||||    
T  32501189 ttctctctctattactttgatttttgtgtcactacctcatttcctttg 32501142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 35067190 - 35067266
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||    
T  35067190 acaacttttgtgacaactttctctctcatactcacattatatttttactttctctctctattgctttggtttttgtg 35067266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 36816612 - 36816561
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttgc 199  Q
    ||||| |||||||||||||||||||||||||| ||||| || ||| ||||||    
T  36816612 actttttctctctattgctttgatttttgtgttaatacgtcattttctttgc 36816561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 25830287 - 25830204
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||| ||||||| |||||| ||||||    
T  25830287 acaacttttgtgacaactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatac 25830204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 33451559 - 33451529
Alignment:
Q  148 actttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||||    
T  33451559 actttctctctctattgctttgatttttgtg 33451529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 182
Target Start/End: Complemental strand, 41639789 - 41639759
Alignment:
Q  152 tctctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||||||||||||||||||||    
T  41639789 tctctctctattgctttgatttttgtgtcaa 41639759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 4054314 - 4054232
Alignment:
Q  116 aactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||| | ||||||||||||       ||||||||||| |||||||||| ||||||||||| ||| || |||| ||||    
T  4054314 aactttatctttcatattcacattatctttttactttctctctttattgctttggtttttgtgtcactacctcatttcatttg 4054232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 5600982 - 5600949
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||||| ||||||||||||||||||||||    
T  5600982 actttctctctttattgctttgatttttgtgtca 5600949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 5639638 - 5639671
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||||| ||||||||||||||||||||||    
T  5639638 actttctctctttattgctttgatttttgtgtca 5639671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 10592276 - 10592243
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    |||||||||||||||||||||| |||||||||||    
T  10592276 actttctctctctattgctttggtttttgtgtca 10592243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 44061752 - 44061826
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||||| |||||||| ||||| ||| ||||||||       ||||||||| ||| ||||||||||||||||||||    
T  44061752 ttttgtgacaactttctctctcatactcacattatcattttactttctctttctgttgctttgatttttgtgtca 44061826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 2621820 - 2621897
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||| |||||||||||||||||| | ||||||       |||||||| |||||||| ||||||||| |||| ||||    
T  2621820 ttttgtgacaactttatctcttatacttacattatatttttactttctcactctattgttttgattttcgtgttaata 2621897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 32954918 - 32954950
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||||||||| ||||||||||||    
T  32954918 tttctctctctattgctttggtttttgtgtcaa 32954950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 37942951 - 37942866
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||| |||||||| ||| | ||||| ||||||       ||||||||||||||||| |||  ||||| ||||||||    
T  37942951 ttgacaatttttgtgacaactttttctttcatatttacattatatttttactttctctctctattgttttagtttttatgtcaata 37942866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 45529289 - 45529249
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacatta 140  Q
    |||||||||||||||||||||| ||||| ||| ||||||||    
T  45529289 tgacaatttttgtaacaactttctctctcatactcacatta 45529249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 5e-21; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 42358683 - 42358583
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||| |||||||| ||||| ||| ||||||||       ||||| |||||||||||||||||||||||||||||||| || |||||||||    
T  42358683 ttgacaatttttgtgacaactttctctctcatactcacattatctttttactttatctctctattgctttgatttttgtgtcaatacctcatttcctttg 42358584  T
Q  199 c 199  Q
    |    
T  42358583 c 42358583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 55361263 - 55361179
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||| ||||||||| ||||||||       |||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  55361263 acaactttctctcttatactcacattatttttttactttctctctctattgctttggtttttgtgtcaatacttcattttctttg 55361179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 6178470 - 6178384
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| |||||| |||| ||| ||||| ||| ||||||||       ||||||||||||||||||||||||||||||||||||||    
T  6178470 ttgacaacttttgtgacaattttctctctcatactcacattatgtttttactttctctctctattgctttgatttttgtgtcaatac 6178384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 9692756 - 9692834
Alignment:
Q  103 caatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||||||||| | |||||| ||||| ||||||||||||       ||||||||||||||||||||||||||||||||||    
T  9692756 caatttttgtgataactttctctctcatattcacattatcattttactttctctctctattgctttgatttttgtgtca 9692834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 33939267 - 33939363
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactt--tctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||| |||||||| ||||| ||||||||||||       ||||  |||||||||||||||||| ||||||||||| |||||| |||||||||    
T  33939267 aatttttgtgacaactttctctctcatattcacattatctttttactttctctctctctattgctttggtttttgtgtcactacttcatttcctttg 33939363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 35597191 - 35597287
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||| || |||||||| ||||| ||| ||||||||       ||||||||||||||||| |||| ||||||||||| ||| ||||||||||||    
T  35597191 acaattttagtgacaactttctctctcatactcacattatttttttactttctctctctattgttttggtttttgtgtcactacctcgtttcctttg 35597287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 41505520 - 41505616
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||||| ||| || |||||||||    
T  41505520 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttg 41505616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 199
Target Start/End: Complemental strand, 37503787 - 37503692
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttgc 199  Q
    ||||||||| |||||||||||| | ||| ||||||||       ||||||| | |||||||||||||||||||||||||||  || ||||||||||    
T  37503787 aatttttgtgacaactttatctttcatactcacattacttttttactttctttttctattgctttgatttttgtgtcaatatctcatttcctttgc 37503692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 55151713 - 55151663
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  55151713 actttctctctctagtgctttggtttttgtgtcaatacttcatttcctttg 55151663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 4494281 - 4494199
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||| ||||||||| |||||||| ||||||||| |||||| |       ||||||||| ||||||||||||||||||||||||    
T  4494281 ttgataatttttgtgacaactttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtca 4494199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 37302575 - 37302672
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttgc 199  Q
    |||| |||||| |||||||| ||||| ||||||||||||       |||||||||||||||| ||||| |||||||| || ||| || ||||||||||    
T  37302575 acaacttttgtgacaactttctctctcatattcacattacctttttactttctctctctattactttggtttttgtgccactacctcatttcctttgc 37302672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 5114107 - 5114203
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||| | |||||||| ||||| | | ||||||||       |||||||||||||||||||||||||||||||||| ||| || ||| |||||    
T  5114107 acaatttttttgacaactttctctctcacactcacattatctttttactttctctctctattgctttgatttttgtgtcactacctcattttctttg 5114203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 5244258 - 5244354
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  5244258 acaacttttgtgacaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttg 5244354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 28700502 - 28700574
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatact 186  Q
    |||||||||||||| ||| ||||||||       |||||||||||||||||||||| |||||||| |||||||    
T  28700502 acaactttatctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatact 28700574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 20547986 - 20547936
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||||||||||||||||||||||| || ||| || |||||||||    
T  20547986 actttctctctctattgctttgatttttgtgccactacctcatttcctttg 20547936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 41309192 - 41309242
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||||||||| ||| || ||| |||||    
T  41309192 actttctctctctattgctttgatttttgtgtcactacctcattttctttg 41309242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 52254134 - 52254084
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| ||||||||||| ||| || |||||||||    
T  52254134 actttctctctctattgctttggtttttgtgtcactacctcatttcctttg 52254084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 288760 - 288834
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| |||||||||||    
T  288760 ttttgtgacaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgtca 288834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 26550269 - 26550343
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||||| |||||||| ||||| ||||||||||||       |||||||||||||||| |||| |||||||||    
T  26550269 aatttttgtgacaactttctctctcatattcacattataattttactttctctctctattactttaatttttgtg 26550343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 38926663 - 38926753
Alignment:
Q  108 tttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||||| ||| |  |||||||||    
T  38926663 tttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactaccttatttcctttg 38926753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 50314700 - 50314737
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||| |||||||||||||||||||||    
T  50314700 actttctctctctattactttgatttttgtgtcaatac 50314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 6093923 - 6093838
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||| |||||| |||||||||||||| ||| || |||||       |||||||||||||||||||||| ||| ||||| ||||    
T  6093923 ttgacaacttttgtgacaactttatctctcatactcgcattatctttttactttctctctctattgctttggtttctgtgttaata 6093838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 48346902 - 48346938
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||| ||||||||||||||    
T  48346902 actttctctctctattgctttggtttttgtgtcaata 48346938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 14207299 - 14207223
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       | |||||||||||||||||||||||||||||    
T  14207299 acaacttttgtgacaactttctctctcatactcacattatgtcttcattttctctctctattgctttgatttttgtg 14207223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 14215047 - 14214971
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       | |||||||||||||||||||||||||||||    
T  14215047 acaacttttgtgacaactttctctctcatactcacattatgtcttcattttctctctctattgctttgatttttgtg 14214971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 34064142 - 34064074
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgattttt 175  Q
    ||||||||||||||||||||| ||| ||||||||       ||||||| |||||||| |||||||||||    
T  34064142 ttttgtaacaactttatctctcatactcacattatttttctactttctttctctattactttgattttt 34064074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 185
Target Start/End: Complemental strand, 35299864 - 35299833
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||||||||||||||||||||||||    
T  35299864 tctctctattgctttgatttttgtgtcaatac 35299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 35377123 - 35377027
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| | | ||||||||       ||||||| ||||||||||||||||||||||| |||||| || ||| |||||    
T  35377123 acaacttttgtgacaactttctctctcacactcacattatgtttttactttctttctctattgctttgatttttgtgccaatacatcattttctttg 35377027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 36671056 - 36670980
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||||||| |||||||| ||||| ||| ||||||||       ||||| |||||||||||||||| ||||||||    
T  36671056 acaatttttgtgacaactttttctctcatactcacattatctttttactttttctctctattgctttggtttttgtg 36670980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 39714032 - 39714001
Alignment:
Q  148 actttctctctctattgctttgatttttgtgt 179  Q
    ||||||||||||||||||||||||||||||||    
T  39714032 actttctctctctattgctttgatttttgtgt 39714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 44855982 - 44856078
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| || || ||| ||||||||       |||||||||||||||| |||||||||||||| || ||| || |||||||||    
T  44855982 acaacttttgtgacaactttctcactcatactcacattacctttttactttctctctctatttctttgatttttgtgccactacctcatttcctttg 44856078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 45711481 - 45711385
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||| ||| ||||| ||| ||||||||       ||||||||||||||||| |||| || ||||||||||||||| ||| |||||    
T  45711481 acaacttttgtgacaattttctctctcatactcacattatctttttactttctctctctattgttttggttattgtgtcaatacttcattttctttg 45711385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 46623936 - 46624032
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| ||||||||||||       ||||||||| ||||||| |||| ||||||||||| ||| || ||| |||||    
T  46623936 acaacttttgtgacaactttctctctgatattcacattatctttttactttctctttctattgttttggtttttgtgtcactacctcattttctttg 46624032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 52714763 - 52714839
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||||||| | |||||| ||||| ||| | ||||||       |||||||||||||||||||||||||||||||    
T  52714763 acaatttttgtgataactttctctctcatacttacattatatttttactttctctctctattgctttgatttttgtg 52714839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 19150315 - 19150281
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaa 182  Q
    ||||||||||||||||| |||||||||||||||||    
T  19150315 actttctctctctattgttttgatttttgtgtcaa 19150281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 24256767 - 24256717
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||| ||||| |||||||||||| ||||||| || |||||||||    
T  24256767 actttctctctttattgttttgatttttgtatcaatacctcatttcctttg 24256717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 26452764 - 26452693
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgattt 173  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       ||||||||||||||||||||||||||    
T  26452764 acaacttttgttacaactttctctctcatactcacattatatttttactttctctctctattgctttgattt 26452693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 27541498 - 27541448
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  27541498 actttctctctctattgctttggtttttgtgccactacctcatttcctttg 27541448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 42357076 - 42357030
Alignment:
Q  152 tctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||| ||||||||||| ||| || |||||||||    
T  42357076 tctctctctattgctttggtttttgtgtcactacctcatttcctttg 42357030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 45186593 - 45186510
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||| |||||||| ||||| ||  ||||||||       |||||||||||||||| ||||||||||  |||||||||    
T  45186593 acaatttttgtgacaactttctctctcatgctcacattatatttttactttctctctctattactttgattttcttgtcaatac 45186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 48353026 - 48353101
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgt 177  Q
    |||| |||||| |||||||| ||||| ||| ||| ||||       ||||||||||||||||||||||||||||||    
T  48353026 acaacttttgtgacaactttctctctcatactcatattatatttttactttctctctctattgctttgatttttgt 48353101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 52939726 - 52939776
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  52939726 actttctctctctattgctttggtttttgtgccactacctcatttcctttg 52939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 3518595 - 3518566
Alignment:
Q  156 tctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||||||||||||||||||||||    
T  3518595 tctctattgctttgatttttgtgtcaatac 3518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 8502886 - 8502849
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||||||||||||||| | |||||||    
T  8502886 actttctctctctattgctttgatttttatctcaatac 8502849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 31104740 - 31104773
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  31104740 actttctctctctattgttttgatttttgtgtca 31104773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 32145981 - 32145948
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  32145981 actttctctctctattgttttgatttttgtgtca 32145948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 34456866 - 34456903
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  34456866 actttctctctctattgctttaatttttgtgccaatac 34456903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 37894237 - 37894200
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  37894237 actttctctctctattactttgatatttgtgtcaatac 37894200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 39629880 - 39629798
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||| |||||| ||||| || ||||| ||| ||||||||       ||||||||||||||||| |||||||||| ||||||||    
T  39629880 acaacttttgtgacaaccttctctctcatactcacattatgtttttactttctctctctattgttttgatttttatgtcaata 39629798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 51982174 - 51982211
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||||||||  |||||||||||||||    
T  51982174 actttctctctctattgctttagtttttgtgtcaatac 51982211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 1340171 - 1340143
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||||||||||||||||||    
T  1340171 tctctctattgctttgatttttgtgtcaa 1340143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 30909057 - 30909097
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacatta 140  Q
    |||||| ||||| ||||||||| ||||||||||||||||||    
T  30909057 tgacaacttttgcaacaactttctctcttatattcacatta 30909097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 36756044 - 36756016
Alignment:
Q  150 tttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||    
T  36756044 tttctctctctattgctttgatttttgtg 36756016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 42672268 - 42672304
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacatta 140  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  42672268 aatttttgtgacaactttatctcttatatttacatta 42672304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 50876356 - 50876308
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||| |||||||||||||||||||| ||||||| || ||| |||||    
T  50876356 tttctctttctattgctttgatttttgtatcaatacctctttttctttg 50876308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 54260197 - 54260169
Alignment:
Q  150 tttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||    
T  54260197 tttctctctctattgctttgatttttgtg 54260169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 19642624 - 19642724
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||| |||||| |||| ||| | ||||||| ||||||||       |||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  19642624 ttgacaacttttgtgacaaatttttatcttatactcacattatgttttcactttctctctctattgctttgatttttgtgtcaatgcttcattttctttg 19642723  T
Q  199 c 199  Q
    |    
T  19642724 c 19642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 44977544 - 44977458
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| ||||||||||| ||| ||||| ||||| ||||||       |||||||||||||||||||||| |||||||||||||||    
T  44977544 ttgacaacttttgtaacaattttctctctcatatttacattatgtttttactttctctctctattgctttggtttttgtgtcaatac 44977458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 9990720 - 9990816
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||||||| ||||||||       |||||||||||||||||||||| |||||||  || |||||| |||||||||    
T  9990720 acaacttttgtgacaactttctctcttatactcacattatctttttactttctctctctattgctttggtttttgtaccactacttcatttcctttg 9990816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 1907803 - 1907724
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||||| |||||||||||||| ||||| | ||||       ||||||||||||||||| ||||||||||||||||||    
T  1907803 aatttttgtgacaactttatctctcatatttatattatgtttttactttctctctctattgttttgatttttgtgtcaat 1907724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 9647207 - 9647257
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  9647207 actttctctctctattgctttggtttttgtgtcactacttcatttcctttg 9647257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 41195610 - 41195709
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||| |||||| |||| ||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||||||||  || |||||||||    
T  41195610 ttgacaacttttgtgacaattttctctctcatactcacattacctttttactttctctctctattgctttggtttttgtgtcaatatctcatttcctttg 41195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 19109087 - 19109038
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttcctttgc 199  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  19109087 tttctctctctattgctttgatttttgtgccactacttcatttcctttgc 19109038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 3838899 - 3838826
Alignment:
Q  125 tcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||||||||       ||||||||||||||||| |||||||||||||||| | |||| |||||||||    
T  3838899 tcttatattcacattatctttttactttctctctctattgttttgatttttgtgtcactgcttcatttcctttg 3838826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 9207619 - 9207715
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  9207619 acaacttttgtgacaactttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgccactacctcatttcctttg 9207715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 31578463 - 31578543
Alignment:
Q  101 gacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||| ||||||| |||||||| ||||| ||| ||||||||       ||||| ||||||||||||||||||||||||||||    
T  31578463 gacagtttttgtgacaactttttctctcatactcacattattcttttactttatctctctattgctttgatttttgtgtca 31578543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 42091534 - 42091450
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||| ||||||||| ||||||||       |||||  ||||||||||||||| ||||||||||| ||| ||||||||||||    
T  42091534 acaactttctctcttatactcacattatctctttacttttcctctctattgctttggtttttgtgtcactacctcgtttcctttg 42091450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 2076644 - 2076694
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||| |||||||||||||||||||||||||||| || ||| |||||    
T  2076644 actttctctttctattgctttgatttttgtgtcaatacctcattttctttg 2076694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 7664062 - 7664012
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  7664062 actttctctctctattgctttggtttttgtgtcaatacctctttttctttg 7664012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 14328411 - 14328494
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       ||||||||||||| ||||||||||||| ||||||||||    
T  14328411 acaacttttgtgacaactttttctctcatactcacattatatttttactttctctctctgttgctttgattttcgtgtcaatac 14328494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 37737963 - 37737917
Alignment:
Q  152 tctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||||||||  || |||||||||    
T  37737963 tctctctctattgctttgatttttgtgtcaatatctcatttcctttg 37737917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 39147795 - 39147878
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| ||||||||||||||| ||| | ||||||||||||       ||||||||| | ||||| ||||||||||||||||||||    
T  39147795 acaacttttgtaacaactttctctttcatattcacattatgtttttactttctctttgtattgttttgatttttgtgtcaatac 39147878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 41042283 - 41042378
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||| ||||||||  || ||||||||    
T  41042283 acaacttttgtgacaactttttctctcatactcacattatctttttactttctctctctattgctttggtttttatgtcaatatctcatttccttt 41042378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 182
Target Start/End: Original strand, 14871715 - 14871748
Alignment:
Q  149 ctttctctctctattgctttgatttttgtgtcaa 182  Q
    ||||||||||||||||||||||||||||||||||    
T  14871715 ctttctctctctattgctttgatttttgtgtcaa 14871748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 43487410 - 43487504
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||| |||||||| ||||| ||  ||||||||       ||||||| |||||||||||||| ||||||||||| ||| || |||||||||    
T  43487410 aatttttgtgacaactttctctctcatgctcacattatttttttactttctttctctattgctttggtttttgtgtcactacctcatttcctttg 43487504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 4657333 - 4657414
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||| |||| ||| ||||||||||||||||||       |||||||||||||||| ||||||| ||| || ||||||    
T  4657333 aatttttgtgacaattttttctcttatattcacattatatttttactttctctctctattactttgatatttatgccaatac 4657414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 27490724 - 27490676
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||||| ||||| || ||| |||||    
T  27490724 tttctctctctattgctttgatttttgtgttaatacatcattttctttg 27490676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 12070879 - 12070960
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||| |||||||| ||||  |||| |||||||       ||||||||| ||||||||||||||||| ||||||||||    
T  12070879 acaatttttgtgacaactttctctc--atatccacattatatttttactttctctttctattgctttgattttcgtgtcaatac 12070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 18254251 - 18254175
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||    
T  18254251 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 18254175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Original strand, 36774580 - 36774640
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttt 174  Q
    |||||||| ||||| ||||||||||||       |||||||||||||||||||||||||||    
T  36774580 acaactttctctctcatattcacattatatttttactttctctctctattgctttgatttt 36774640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 7258557 - 7258523
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||||||||||||||||| ||||||    
T  7258557 actttctctctctattgctttgatttttatgtcaa 7258523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 11965869 - 11965899
Alignment:
Q  148 actttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||||    
T  11965869 actttctctctctattgctttgatttttgtg 11965899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 22446012 - 22445970
Alignment:
Q  156 tctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||||| |||||||||||||||| || |||||||||    
T  22446012 tctctattgctttaatttttgtgtcaatacctcatttcctttg 22445970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 23690504 - 23690454
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||| |||||||| |||| ||||||||||||||| || |||||||||    
T  23690504 actttctcactctattgttttggtttttgtgtcaatacctcttttcctttg 23690454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 32477407 - 32477457
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||| |||||||||||||||||| | ||||| || |||||||||    
T  32477407 actttctctctatattgctttgatttttgtatgaatacctcatttcctttg 32477457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 34945086 - 34945056
Alignment:
Q  148 actttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||||    
T  34945086 actttctctctctattgctttgatttttgtg 34945056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 3771447 - 3771484
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  3771447 actttctctctctattactttgatatttgtgtcaatac 3771484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 7698202 - 7698276
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||||| | |||||| | | ||||||||||||||       ||||||||| |||||||||||||||||||||    
T  7698202 aatttttgtgataactttcttttttatattcacattatttttttactttctctttctattgctttgatttttgtg 7698276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 10216925 - 10216962
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||||||| | |||||||||||||||    
T  10216925 actttctctctctattgcttcggtttttgtgtcaatac 10216962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 19843561 - 19843590
Alignment:
Q  149 ctttctctctctattgctttgatttttgtg 178  Q
    ||||||||||||||||||||||||||||||    
T  19843561 ctttctctctctattgctttgatttttgtg 19843590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 22526038 - 22525997
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacatta 140  Q
    |||||||||||||| |||||||| ||| ||||||||||||||    
T  22526038 ttgacaatttttgtgacaactttctcttttatattcacatta 22525997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 32944499 - 32944466
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||| ||||||||||||||||||||||||||||    
T  32944499 actttttctctctattgctttgatttttgtgtca 32944466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 37316810 - 37316777
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    |||||||||||||||||||||||| |||||||||    
T  37316810 actttctctctctattgctttgatatttgtgtca 37316777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 5427267 - 5427182
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||| ||||||||| |||||||  ||||||||||||||||||       ||||| |||||||||||  ||| ||||| ||||||||    
T  5427267 ttgataatttttgtgacaacttcctctcttatattcacattatgtttttactttttctctctattgtgttggtttttttgtcaata 5427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 6511550 - 6511518
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||||||||| ||||||||||||    
T  6511550 tttctctctctattgctttggtttttgtgtcaa 6511518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 8427579 - 8427664
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||| |||||||| ||||| ||| | ||||||       ||||||||||||||||  |||| |||| |||||||||    
T  8427579 ttgacaatttttgtgacaactttctctctcatacttacattatacttttactttctctctctattattttggttttcgtgtcaata 8427664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 41321252 - 41321380
Alignment:
Q  66 aaaagagaaatgatatatgaacaattttgaagattgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgc 165  Q
    |||||||||||||||||||||||||  |     || ||||||||||| |||||||| | ||| ||| ||||||||       |||||||||||||||| |    
T  41321252 aaaagagaaatgatatatgaacaatcatt----tttacaatttttgtgacaactttctttctcatactcacattatctttgtactttctctctctattac 41321347  T
Q  166 tttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| ||||||||||||||| || |||||||||    
T  41321348 tttggtttttgtgtcaatacctcatttcctttg 41321380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 2972399 - 2972447
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctt 196  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||    
T  2972399 actttctctctctattgctttgatttttgtgtcaatacctcatttcctt 2972447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 8097329 - 8097376
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  8097329 tttctctctctattgctttgatttttgtgtcaatacttctttttcttt 8097376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 18660834 - 18660884
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  18660834 actttctctctctattgctttggtttttgtgccaatacttcatttcctttg 18660884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 19522045 - 19521950
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||| |||||| |||||||| ||| | ||| ||||||||       |||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  19522045 acaacttttgtgacaactttctctttcatactcacattatctttttactttctctctctattgctttgatttttgtgtcactacctcatttccttt 19521950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 1274384 - 1274469
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||| |||||| |||||||||||| | ||| ||||||||       |||| ||||||||||||||||| ||||||||||||||    
T  1274384 ttgacaacttttgtgacaactttatctttcatactcacattacctttttacttcctctctctattgctttggtttttgtgtcaata 1274469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 4719677 - 4719765
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||| |||||| ||||| || ||||| ||| ||||||||       ||||| ||||||||||||||||||||||||| ||||||||    
T  4719677 ttgacaacttttgtgacaaccttttctctcatactcacattatgtttttactttttctctctattgctttgatttttgtgccaatactt 4719765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 5168224 - 5168288
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||| ||| ||||||||       |||||||||||||||||||||||||||||||    
T  5168224 acaactttatctctcatactcacattatctttttactttctctctctattgctttgatttttgtg 5168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 33037561 - 33037645
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||| ||||| ||| ||||||||       ||||| |||||||||||||||||||||||||||| ||| || |||||||||    
T  33037561 acaactttctctctcatactcacattatctttttactttttctctctattgctttgatttttgtgtcactacctcatttcctttg 33037645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 7076564 - 7076514
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| || |||||| |||||||||    
T  7076564 actttctctctctattgctttggtttttgtgccattacttcatttcctttg 7076514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 13309909 - 13310008
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||| | |||||| ||||| ||||||||||||       |||||||||||||| | ||||| ||||||||| ||||| || ||| |||||    
T  13309909 ttgacaatttttgtgataactttctctctcatattcacattatgtttttactttctctctctactactttggtttttgtgttaatacctcattttctttg 13310008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 13089826 - 13089744
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    ||||||| |||||| |||||||| ||| | ||| ||||||||       ||||| ||||||||||||||||||||||||||||    
T  13089826 ttgacaacttttgtgacaactttctctttcatactcacattatcattctactttatctctctattgctttgatttttgtgtca 13089744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 35567532 - 35567610
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaa 182  Q
    ||||||||| | |||||| ||||| ||||| ||||||       ||||||||||||||||||||||| |||||||||||    
T  35567532 aatttttgtgataactttctctctcatatttacattatatttttactttctctctctattgctttgaattttgtgtcaa 35567610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 20770158 - 20770243
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| |||||| |||||||| ||||| ||| ||||||||       ||||| ||||||||||||||||||||| ||||||||||    
T  20770158 ttgacaacttttgtgacaactttctctctcatactcacattatttttt-actttatctctctattgctttgattttcgtgtcaatac 20770243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 29463073 - 29463109
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatact 186  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29463073 tttctctctctattgctttgatttttgtgccaatact 29463109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 33958255 - 33958219
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||| ||||||||||||||    
T  33958255 actttctctctctattgctttggtttttgtgtcaata 33958219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 198
Target Start/End: Original strand, 36738984 - 36739073
Alignment:
Q  109 ttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||||| ||| || |||| ||||    
T  36738984 ttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcttttg 36739073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 1079994 - 1079898
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||| |||||||| ||||| ||||||||||||       ||||||| ||| ||||||||||  ||||||| |||||| || ||| |||||    
T  1079994 acaatttttgtgacaactttctctctcatattcacattatctttttactttctttctatattgctttggattttgtgccaatacctcattttctttg 1079898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 28306174 - 28306098
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||||||||| ||| ||||||||       |||||||||||||||||||||| | ||||||    
T  28306174 acaacttttgtgacaactttatctctcatactcacattatcttcttactttctctctctattgctttggtctttgtg 28306098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 884476 - 884547
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||||| |||||||||||||| ||| ||||||||       ||||||||| ||||||| |||||||||||||    
T  884476 ttttgtgacaactttatctctcatactcacattatatttttactttctctttctattgttttgatttttgtg 884547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 12739848 - 12739878
Alignment:
Q  148 actttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||||    
T  12739848 actttctctctctattgctttgatttttgtg 12739878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 12802671 - 12802701
Alignment:
Q  148 actttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||||    
T  12802671 actttctctctctattgctttgatttttgtg 12802701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 22098285 - 22098368
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||| ||||||| |||||| ||||||    
T  22098285 acaacttttgtgacaactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatac 22098368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 35646458 - 35646508
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||| |||||||||| ||||||||||| ||| || |||||||||    
T  35646458 actttctctctatattgctttggtttttgtgtcactacctcatttcctttg 35646508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 39054662 - 39054692
Alignment:
Q  148 actttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||||    
T  39054662 actttctctctctattgctttgatttttgtg 39054692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 16972095 - 16972062
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    |||||||||||||||| |||||||||||||||||    
T  16972095 actttctctctctattactttgatttttgtgtca 16972062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 36563048 - 36563011
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||||||| | |||||||||||||||    
T  36563048 actttctctctctattgcttaggtttttgtgtcaatac 36563011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 5042276 - 5042316
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacatta 140  Q
    |||||||||||| ||||||||||||||| ||| ||||||||    
T  5042276 tgacaatttttgcaacaactttatctctcatactcacatta 5042316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 5721859 - 5721786
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgattttt 175  Q
    ||||||||||| |||||||||||||| ||| | ||||||       |||||||||| ||||||||||| |||||    
T  5721859 acaatttttgtgacaactttatctctcatactgacattatctttttactttctctccctattgctttggttttt 5721786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 27487962 - 27487998
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||| |||||||| |||||    
T  27487962 actttctctctctattgctttggtttttgtgccaata 27487998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 39195793 - 39195821
Alignment:
Q  148 actttctctctctattgctttgatttttg 176  Q
    |||||||||||||||||||||||||||||    
T  39195793 actttctctctctattgctttgatttttg 39195821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 42643206 - 42643170
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  42643206 actttctctctctattgatttgttttttgtgtcaata 42643170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 42853606 - 42853689
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| ||||||||||| ||||||||||||| ||| ||||       |||||||||||||||||||||| |||||||||||||||    
T  42853606 acaacttttgtaacaattttatctcttatactcatattatgttttcactttctctctctattgctttggtttttgtgtcaatac 42853689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 336852 - 336766
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||| |||||||| ||||| |||||||||||         |||||||||||||||||||||||||||||| ||||||    
T  336852 ttgacaatttttgtgacaactttctctctcatattcacattgtatttttgctttctctctctattgctttgatttttgtgccaatac 336766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 46634129 - 46634225
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||||||||| ||| ||||||||       ||||||||| |||||| ||||||||||||||||| ||| || |||||||||    
T  46634129 acaacttttgtgacaactttatctctcatactcacattatctttttactttctctttctattactttgatttttgtgtcactacctcatttcctttg 46634225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 52895255 - 52895339
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||||||||| |||||||||||||| ||| ||||||||       | ||| ||||||||||||||||||||| |||||||||    
T  52895255 tgacaatttttgtgacaactttatctctcataatcacattatgtttttattttatctctctattgctttgattttcgtgtcaata 52895339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 37997329 - 37997379
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  37997329 actttctctctctattgctttgatttttgtgtcaatacctcattttctttg 37997379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 38519820 - 38519899
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||| |||||||| ||||| ||| |||||| |       |||||||||||||||||||||||||||||||    
T  38519820 ttgacaatttttgtgacaactttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtg 38519899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 50831800 - 50831717
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaa 182  Q
    ||||||| |||||||||||||||  |||| ||| |||||| |       |||||||||||||||||||||||||||||||||||    
T  50831800 ttgacaacttttgtaacaactttccctctcatactcacatcatgtctttactttctctctctattgctttgatttttgtgtcaa 50831717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 39440559 - 39440608
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  39440559 actttctctctctattgctttgatttttgtgtcactacctcatttccttt 39440608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 50890118 - 50890032
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| |||||| |||||||| ||||| ||| ||||||||        |||||||||||||||||||||||||||||| ||||||    
T  50890118 ttgacaacttttgtgacaactttctctctcatactcacattatatttttgctttctctctctattgctttgatttttgtgccaatac 50890032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 10250557 - 10250461
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| |||||||| || |||||| ||| |||||    
T  10250557 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgccactacttcattttctttg 10250461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 19232129 - 19232090
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  19232129 actttctctctctattgctttgatttttgtgccaatactt 19232090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 52204926 - 52204965
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatactt 187  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  52204926 actttctctctctattgctttgatttttgtgtcactactt 52204965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 2738312 - 2738233
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||| | |||||| ||||| ||||||||||||       |||||||||||||||| |||||||| |||||    
T  2738312 ttgacaatttttgtgataactttctctctcatattcacattatctttctactttctctctctatttctttgattgttgtg 2738233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 10474108 - 10474058
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||| |||||    
T  10474108 actttttctctctattactttgatttttgtgtcaatacttctttttctttg 10474058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 11068763 - 11068813
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||||||||| | | || |||||||||    
T  11068763 actttctctctctattgctttgatttttgtgtcactgcctcatttcctttg 11068813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 16019552 - 16019586
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||||||||||||||||||||||||    
T  16019552 actttctctctctattgctttgatttttgtgtcaa 16019586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 39654903 - 39654949
Alignment:
Q  152 tctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||||||||| || ||| |||||    
T  39654903 tctctctctattgctttgatttttgtgtcaatacctcattttctttg 39654949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 51255773 - 51255852
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||| |||||| |||||||| ||||| ||| |||||| |       |||||||||||||||||||||||||||||||    
T  51255773 ttgacaacttttgtgacaactttctctctcatactcacatgattattctactttctctctctattgctttgatttttgtg 51255852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 149529 - 149447
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||| ||||||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||  |||||||||||    
T  149529 ttgataatttttgtgacaactttctctctcatactcacattatgtttcaactttctctctctattgctttagtttttgtgtca 149447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 24045324 - 24045357
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||||||||||||||||||||||||||||||    
T  24045324 tctctctattgctttgatttttgtgtcaatactt 24045357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 24575847 - 24575798
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||||||||||||||||||||| |||||||| |||||| || ||||||||    
T  24575847 actttctctctctattgctttggtttttgtgccaatacctcatttccttt 24575798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 37297078 - 37297172
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctt 196  Q
    |||| |||||| |||| ||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||||| ||| || |||||||    
T  37297078 acaacttttgtgacaattttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctt 37297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 5386414 - 5386479
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgt 179  Q
    |||||||| ||||| ||| ||||||||       ||||||||||||||||||||||||||||||||    
T  5386414 acaactttctctctcatactcacattattcttttactttctctctctattgctttgatttttgtgt 5386479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 28458421 - 28458336
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| |||||| |||||||| ||||| ||| ||||||||       ||||| ||||||||||||||||||||| ||||||||||    
T  28458421 ttgacaacttttgtgacaactttctctctcatactcacattatttttt-actttatctctctattgctttgattttcgtgtcaatac 28458336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 40348825 - 40348902
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||| |||| ||| ||||| ||| ||||||||       |||||||||||||||||||||| |||||||||||    
T  40348825 aatttttgtgacaattttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtca 40348902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 7632457 - 7632422
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7632457 actttctctctctattgctttgatttttgtgccaat 7632422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 9393843 - 9393878
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| ||||||||||||||||||||||||||||    
T  9393843 tttctctttctattgctttgatttttgtgtcaatac 9393878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 14113609 - 14113570
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  14113609 actttatctctctattgctttgattttcgtgtcaatactt 14113570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 26910231 - 26910307
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||| |||||  |||||| ||||       |||||||||||||||||||||||||||||||    
T  26910231 acaacttttgtgacaactttctctctcgtattcatattatttttttactttctctctctattgctttgatttttgtg 26910307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 185
Target Start/End: Complemental strand, 31574933 - 31574898
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||||||||||||||| |||||||    
T  31574933 tttctctctctattgctttgatttttgtatcaatac 31574898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 43175013 - 43175109
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| | |||||| ||||| ||| ||||||||       ||||||||||||||| |||||| ||||||||||| ||| || |||||||||    
T  43175013 acaacttttgtgataactttctctctcatactcacattatttttttactttctctctctatggctttggtttttgtgtcactacctcatttcctttg 43175109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 54000725 - 54000793
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctt 167  Q
    |||||||||||| |||||||||| ||||| ||| ||||||||       ||||||||||||||||||||    
T  54000725 ttgacaatttttataacaactttctctctcatactcacattatcattttactttctctctctattgctt 54000793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 184
Target Start/End: Complemental strand, 11672113 - 11672083
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||||||||||||    
T  11672113 tctctctattgctttgatttttgtgtcaata 11672083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 18315979 - 18316046
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||||||| ||||||||| |||||| |       ||||||||| ||||||||||||||||||||||||    
T  18315979 acaactttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtca 18316046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 29175256 - 29175336
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||||||| |||||||| ||||| ||| ||||||||       ||||||||||||  |||||||| ||||||||||||||    
T  29175256 acaatttttgtgacaactttttctctcatactcacattatctttttactttctctctc--ttgctttggtttttgtgtcaata 29175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 188
Target Start/End: Original strand, 35897786 - 35897816
Alignment:
Q  158 tctattgctttgatttttgtgtcaatacttc 188  Q
    |||||||||||||||||||||||||||||||    
T  35897786 tctattgctttgatttttgtgtcaatacttc 35897816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 44257771 - 44257688
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||| |||||||| ||||| ||| ||||||||       ||||||||||||||||  |||||| ||||||| |||||    
T  44257771 acaatttttgtgacaactttctctctcatactcacattatatttttactttctctctctattattttgatatttgtgttaatac 44257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 50608620 - 50608570
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| ||||||||||| ||||||||||||||||||||  || |||||||||    
T  50608620 acttcctctctctattactttgatttttgtgtcaatatctcatttcctttg 50608570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Original strand, 51577690 - 51577720
Alignment:
Q  148 actttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||||    
T  51577690 actttctctctctattgctttgatttttgtg 51577720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 1816671 - 1816638
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||| ||||||||||||||||||||||||||||    
T  1816671 actttatctctctattgctttgatttttgtgtca 1816638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 29227238 - 29227205
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    |||||||||||||||||||||||| |||||||||    
T  29227238 actttctctctctattgctttgatatttgtgtca 29227205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 185
Target Start/End: Original strand, 42959306 - 42959384
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||| ||||||||||||||||||| ||||||||       ||||| ||||||||||||| || |||  ||||||||||    
T  42959306 ttttgcaacaactttatctcttatactcacattatttttttactttatctctctattgctatggtttccgtgtcaatac 42959384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 48796528 - 48796491
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  48796528 actttctctctcttttgctttgatatttgtgtcaatac 48796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 49896662 - 49896625
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  49896662 actttatctctctattgctttgattttcgtgtcaatac 49896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 5249904 - 5249981
Alignment:
Q  108 tttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||| |||||||| ||||| ||| ||||||||       ||||||||||||||||| |||| |||| ||||||||||    
T  5249904 tttgtgacaactttctctctcatactcacattatgtttttactttctctctctattgttttggttttcgtgtcaatac 5249981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 21025629 - 21025698
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttg 169  Q
    ||||||||| ||| ||||||||||||||  || ||||||||       ||||||||||||||||||||||    
T  21025629 tgacaatttatgtgacaactttatctctcttactcacattatttttttactttctctctctattgctttg 21025698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 26492088 - 26492132
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||| |||||||| || |||||| |||||||||    
T  26492088 tctctctattgctttggtttttgtgccactacttcatttcctttg 26492132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 42396031 - 42396003
Alignment:
Q  150 tttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||    
T  42396031 tttctctctctattgctttgatttttgtg 42396003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 49585026 - 49585107
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||  |||||||| ||||| ||| ||||||||       |||||||||||||||| ||||||| |||||| ||||||    
T  49585026 aatttttgggacaactttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatac 49585107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 53573509 - 53573590
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||| ||||||||||||||||| ||| | ||||||       ||||||||| ||||||| ||| |||||||| |||||||    
T  53573509 aattttcgtaacaactttatctctcatagttacattatgttgatactttctctttctattgttttaatttttgtttcaatac 53573590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 53801749 - 53801705
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||  ||||||||||||||| || |||||||||    
T  53801749 tctctctattgctttagtttttgtgtcaatacctcatttcctttg 53801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 15083046 - 15082996
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  15083046 actttctctctctattgctttggtttttgtgtcaatacttcatttcctttg 15082996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 649798 - 649894
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||||| ||| || |||||||||    
T  649798 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtcactacctcatttcctttg 649894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 44519196 - 44519097
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||| |||| | |||||||| ||||||||| | ||||||       |||||||||||||||||||||||||||||||  ||||| || |||||||||    
T  44519196 ttgacaacttttatgacaactttctctcttatacttacattatctttttactttctctctctattgctttgatttttgtgctaatacctcatttcctttg 44519097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 50775201 - 50775118
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||| |||||||| ||||| ||| ||||||||       ||||| |||||||||||||||| ||||||||||||    
T  50775201 ttgacaatttttgtgacaactttctctctcatactcacattatgtttttactttatctctctattgctttggtttttgtgtcaa 50775118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 4466721 - 4466807
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| ||||||||||||||| | ||| ||||| ||||||       ||||||||| | ||||||||||||||||||||||||||    
T  4466721 ttgacaacttttgtaacaactttctgtctcatatttacattatgtttttactttctctttttattgctttgatttttgtgtcaatac 4466807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 9567005 - 9566919
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||| |||||| |||||||| ||||| ||| ||||||||       |||||||| ||||||||||||| |||||||||||||||    
T  9567005 ttgacaacttttgtgacaactttctctctcatactcacattatgtttttactttctcactctattgctttggtttttgtgtcaatac 9566919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 35369775 - 35369824
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  35369775 actttctctctctattgctttgatttttgtgtcactacctcatttccttt 35369824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 48858850 - 48858932
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    ||||||| |||||| |||||||| ||||| ||| ||||||||       |||| |||||||||||||||||||||||||||||    
T  48858850 ttgacaacttttgtgacaactttctctctcatactcacattatcattttacttcctctctctattgctttgatttttgtgtca 48858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 9987978 - 9988062
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||| |||||| |||||||| ||| | ||| ||||||||       ||||||||||||||||||||||||||||||| ||||    
T  9987978 ttgacaacttttgtgacaactttctctttcatactcacattatatttttactttctctctctattgctttgatttttgtgccaat 9988062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 18434821 - 18434921
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||| |||||| |||||||| ||||| | ||||||||||       ||||||||||| ||||| ||||||||||||| |||||| || ||| |||||    
T  18434821 ttgacaacttttgtgacaactttctctctcacattcacattatgtttttactttctctctttattgttttgatttttgtgccaatacatcattttctttg 18434920  T
Q  199 c 199  Q
    |    
T  18434921 c 18434921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 49570026 - 49570102
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||| ||||| ||||||||||||       ||||||||||||||||| |||||||||||||    
T  49570026 acaacttttgtgacaactttctctctcatattcacattatatttttactttctctctctattgttttgatttttgtg 49570102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 18954343 - 18954257
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||||||| |||||||||||||||| ||||| ||||||       ||||||||| |  |||||||||||||||||| ||||||||    
T  18954343 tgacaattttt-taacaactttatctctcatatttacattatatttttactttctcttttcattgctttgatttttgtgccaatactt 18954257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 19055804 - 19055705
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||| |||| | |||||||| ||||||||| ||||||||       ||||||||||||||||| |||| |||||||| |||||  || |||||||||    
T  19055804 ttgacaacttttatgacaactttctctcttatactcacattacctttttactttctctctctattgttttggtttttgtgacaatatctcatttcctttg 19055705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 33100849 - 33100932
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||||||| ||||| ||| ||||||||       ||||||||||||||||| |||||||||||||||| ||| || ||||||||    
T  33100849 acaactttctctctcatactcacattatctttttactttctctctctattgttttgatttttgtgtcactacctcatttccttt 33100932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 37619578 - 37619669
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||| |||||||| ||||| ||| ||||||||       | |||||||||||||||| |||||||||||| |||||| || |||||||||    
T  37619578 ttttgtgacaactttctctctcatactcacattatctttttaatttctctctctattgcgttgatttttgtgccaatacctcatttcctttg 37619669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 45333786 - 45333836
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||| |||||||||||||||||||||| ||| || |||||||||    
T  45333786 actttctctctttattgctttgatttttgtgtcactacctcatttcctttg 45333836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 47721436 - 47721523
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||| |||||| |||||||| | ||| ||||||||||||       ||||| ||||||||||||||||||||| ||||||||||||    
T  47721436 ttgacaacttttgtgacaactttctgtctcatattcacattatttttt-actttatctctctattgctttgattttcgtgtcaatactt 47721523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 47728428 - 47728515
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||| |||||| |||||||| | ||| ||||||||||||       ||||| ||||||||||||||||||||| ||||||||||||    
T  47728428 ttgacaacttttgtgacaactttctgtctcatattcacattatttttt-actttatctctctattgctttgattttcgtgtcaatactt 47728515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 48261215 - 48261265
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| |||||| || |||||||||    
T  48261215 actttctctctctattgctttggtttttgtgccaatacctcttttcctttg 48261265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 49065360 - 49065310
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| |||||||| ||||||||| ||| |||||    
T  49065360 actttctctctctattgctttggtttttgtgccaatacttcattttctttg 49065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 198
Target Start/End: Original strand, 50932383 - 50932429
Alignment:
Q  152 tctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||    
T  50932383 tctctttctattgctttgatttttgtgtcaatacctcatttcctttg 50932429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 26469391 - 26469484
Alignment:
Q  105 atttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||| | |||||||| ||||||||||| ||||||       | |||||||||||||||||| | ||||||||||| ||| || |||||||||    
T  26469391 atttttatgacaactttctctcttatatttacattatctttttattttctctctctattgcttcggtttttgtgtcactacctcatttcctttg 26469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 51718665 - 51718572
Alignment:
Q  105 atttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||| | |||||||| ||||| ||| ||||||||       || |||||||||||||  |||||||||||||||| |||||| |||||||||    
T  51718665 atttttttcacaactttctctctcatactcacattatctttttaccttctctctctattattttgatttttgtgtcactacttcatttcctttg 51718572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 14983812 - 14983884
Alignment:
Q  112 taacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||| ||||| ||||||||||||       ||||||||||||||||| |||  ||||||||||||||    
T  14983812 taacaactttctctctcatattcacattatgtttttactttctctctctattgttttagtttttgtgtcaata 14983884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 23645452 - 23645536
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||| ||| ||||||||       ||||||||||||||||| |||| |||||||| || ||| || |||||||||    
T  23645452 acaactttatctctcatactcacattatctttttactttctctctctattgttttggtttttgtgccactacctcatttcctttg 23645536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 37275029 - 37274978
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttgc 199  Q
    ||||||| |||||||||||||| ||||||||||| ||| || ||||||||||    
T  37275029 actttctttctctattgctttggtttttgtgtcactacctcatttcctttgc 37274978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 49647194 - 49647110
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||| |   |||||||||||| ||||||||||||       ||||||||||||||||| |||| ||||||||||||||    
T  49647194 ttgacaatttttatgtgaactttatctctcatattcacattatatttt-actttctctctctattgttttggtttttgtgtcaata 49647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 51571342 - 51571292
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||| |||||||||||| ||||||||||||||| || ||| |||||    
T  51571342 actttctctttctattgctttggtttttgtgtcaatacctctttttctttg 51571292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 8828117 - 8828080
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  8828117 actttctctctctattgctttggtttttgtgccaatac 8828080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 26208221 - 26208180
Alignment:
Q  156 tctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||    
T  26208221 tctctattgttttgatttttgtgtcaatacttctttttcttt 26208180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 41070898 - 41070935
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  41070898 actttctctatctattgctttgatttttatgtcaatac 41070935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 181
Target Start/End: Complemental strand, 47642643 - 47642569
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||||| |||||||| ||||| ||| ||||||||       ||||||||| ||||||||||| ||||||||||||    
T  47642643 ttttgtgacaactttctctctcatactcacattatcatattactttctctttctattgctttaatttttgtgtca 47642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 49446838 - 49446756
Alignment:
Q  103 caatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||| |||||||| ||||| ||| | ||||||       |||||||||||||||| ||||||| |||||| ||||||    
T  49446838 caatttttgtgacaactttctctctcatacttacattatatttttactttctctctctattactttgatatttgtgccaatac 49446756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 37685410 - 37685454
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||| ||| || |||| ||||    
T  37685410 tctctctattgctttgatttttgtgtcactacctcatttcttttg 37685454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 37700108 - 37700064
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||||||||| ||| || |||| ||||    
T  37700108 tctctctattgctttgatttttgtgtcactacctcatttcttttg 37700064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 44914566 - 44914518
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||  ||||||||||| ||| || |||||||||    
T  44914566 tttctctctctattgctttagtttttgtgtcactacctcatttcctttg 44914518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 182
Target Start/End: Complemental strand, 45065895 - 45065863
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaa 182  Q
    |||||||||||||||||||| ||||||||||||    
T  45065895 tttctctctctattgctttggtttttgtgtcaa 45065863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 51080086 - 51080050
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  51080086 actttctctctctattgctttggtttttgtgtaaata 51080050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 52437526 - 52437607
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||| |||||||| ||||| ||| ||||||||       ||||| ||| ||||||||||||||||| || |||||||    
T  52437526 aatttttgtgacaactttctctctcatactcacattatatttttactttatctttctattgctttgattttcgtatcaatac 52437607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 22079605 - 22079508
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttgc 199  Q
    |||| |||||| |||||||| ||||| | | ||||||||       |||||||||||||||||||||||||||||||||||||| || ||| ||||||    
T  22079605 acaacttttgtgacaactttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgtcaatacatcattttctttgc 22079508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 5694193 - 5694097
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||||| | || ||||| ||| ||||||||||||       ||||| ||||||||||| |||||||||||||||||||| || |||||||||    
T  5694193 acaatttttgtgataattttatttctcatattcacattatgtttttactttttctctctattgttttgatttttgtgtcaatacctcatttcctttg 5694097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 31883348 - 31883265
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaa 182  Q
    ||||||| |||||||||||||||  |||| ||| |||||| |       |||||||||||||||||||||||||||||||||||    
T  31883348 ttgacaacttttgtaacaacttttcctctcatactcacatcatgtatttactttctctctctattgctttgatttttgtgtcaa 31883265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 8505818 - 8505740
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgt 177  Q
    ||||||| |||||| |||||||| ||||| ||||||||||||       ||||| ||||||||||||||||||||||||    
T  8505818 ttgacaacttttgtgacaactttctctctcatattcacattatccttttactttttctctctattgctttgatttttgt 8505740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Original strand, 15974643 - 15974733
Alignment:
Q  108 tttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||| |||||||| ||||| ||||||||||||       | |||||||||||||||||||| ||||||||| | |||||| |||||||||    
T  15974643 tttgttacaactttctctctcatattcacattatctttttattttctctctctattgctttggtttttgtgttactacttcatttcctttg 15974733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 3853303 - 3853267
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||||||||||||||||||    
T  3853303 actttctctctctattgctttgatttttgtgtcaata 3853267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 552834 - 552918
Alignment:
Q  114 acaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||| ||||| ||||||||||||       |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  552834 acaactttgtctctcatattcacattatctttttactttctctctctattgctttggtttttgtgccactacctcatttcctttg 552918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 17551423 - 17551339
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||| ||||||||||||||| ||||| ||| ||||||||       ||||| ||||||||||| |||| |||||||||||||    
T  17551423 ttgacaacttttgtaacaactttctctctcatactcacattatgtttttactttatctctctattgttttggtttttgtgtcaat 17551339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 198
Target Start/End: Original strand, 26595424 - 26595474
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  26595424 actttctctctctattgctttggtttttgtgtcaatacctcattttctttg 26595474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 8645335 - 8645409
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgattt 173  Q
    ||||||| |||||| |||||||| ||||| ||| ||||||||       ||||||||||||||||||||||||||    
T  8645335 ttgacaacttttgtgacaactttctctctcatactcacattatccttttactttctctctctattgctttgattt 8645409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 13689982 - 13689941
Alignment:
Q  156 tctctattgctttgatttttgtgtcaatacttcgtttccttt 197  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  13689982 tctctattgctttgatttttgtgtcaatacctcatttccttt 13689941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 5080609 - 5080513
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||| |||||| |||||||| ||| | ||| ||||||||       |||||||||||||||||||||  ||||||||||| ||| || |||||||||    
T  5080609 acaacttttgtgacaactttctctttcatactcacattatttttttactttctctctctattgctttagtttttgtgtcactacctcatttcctttg 5080513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 5522682 - 5522605
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| ||||||||| |||||||||||||| ||||||||||||       ||||  |||||||||||||||| ||||||||    
T  5522682 ttgataatttttgtgacaactttatctctcatattcacattatacttttactt--tctctctattgctttggtttttgtg 5522605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 25811880 - 25811804
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    |||| |||||| |||||||| ||||| ||| ||||||||       |||||||||||||||||||||| ||||||||    
T  25811880 acaacttttgtgacaactttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 25811804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 184
Target Start/End: Original strand, 277072 - 277102
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaata 184  Q
    |||||||||||||||||||||||||||||||    
T  277072 tctctctattgctttgatttttgtgtcaata 277102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 20998141 - 20998091
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||||| ||||||| ||||||| || ||| |||||    
T  20998141 actttctctctctattgctttggtttttgtatcaatacctcattttctttg 20998091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 255117 - 255080
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  255117 actttctctctccattgctttgattttcgtgtcaatac 255080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 4820448 - 4820477
Alignment:
Q  154 tctctctattgctttgatttttgtgtcaat 183  Q
    ||||||||||||||||||||||||||||||    
T  4820448 tctctctattgctttgatttttgtgtcaat 4820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 8098593 - 8098560
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    |||||||||||||||||||||| |||||||||||    
T  8098593 actttctctctctattgctttggtttttgtgtca 8098560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 28630130 - 28630204
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtg 178  Q
    ||||||||| |||||||| ||||| ||| ||||||||       ||||||||| |||||| ||||||||||||||    
T  28630130 aatttttgtgacaactttctctctcatactcacattatatatttactttctctttctattactttgatttttgtg 28630204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 32459560 - 32459486
Alignment:
Q  100 tgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttt 174  Q
    |||||| |||||| |||||||| ||||| ||||||||||||       ||||| |||||||||||||||| ||||    
T  32459560 tgacaacttttgtgacaactttctctctcatattcacattacttttttactttatctctctattgctttggtttt 32459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 33195313 - 33195276
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatactt 187  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  33195313 tttctctttctattgttttgatttttgtgtcaatactt 33195276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 6271425 - 6271461
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaata 184  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  6271425 actttctctctctattgttttggtttttgtgtcaata 6271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 16368086 - 16368005
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||||||||||||||||| | ||| ||| ||||||||       |||||||||| ||||||  ||| |||||||||||||||    
T  16368086 aatttttgtaacaactttctttctcatactcacattatatttttactttctctcactattgtcttggtttttgtgtcaatac 16368005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 24900802 - 24900884
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaat 183  Q
    ||||||| |||||| |||||||| | ||  ||||||||||||       |||||||||||||||||||||| |||||||| ||||    
T  24900802 ttgacaacttttgtgacaactttctttc--atattcacattatatttttactttctctctctattgctttggtttttgtgccaat 24900884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Original strand, 28748190 - 28748218
Alignment:
Q  150 tttctctctctattgctttgatttttgtg 178  Q
    |||||||||||||||||||||||||||||    
T  28748190 tttctctctctattgctttgatttttgtg 28748218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 30956106 - 30956183
Alignment:
Q  107 ttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaata 184  Q
    |||||| ||||||||| |||||||||||||||||       ||||| ||||||||||| |||||| || ||| |||||    
T  30956106 ttttgtgacaactttaactcttatattcacattatcattttactttatctctctattgatttgatcttcgtgccaata 30956183  T

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Target: scaffold0432 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 6561 - 6482
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    |||| |||||| |||||||||||||| ||| |||||||        |||||||||||||||| |||||||||||||||||    
T  6561 acaacttttgtgacaactttatctctcatactcacattgttcttctactttctctctctattactttgatttttgtgtca 6482  T

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Target: scaffold0343 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 8915 - 8953
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtcaatact 186  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  8915 actttctctctctattgctatgatttttgtgtcaatact 8953  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 12527 - 12610
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    ||||||||||| |||||||| ||||||||| ||| ||||       |||||||||||||||| ||||||| |||||| ||||||    
T  12527 acaatttttgtgacaactttctctcttatactcatattatatttttactttctctctctattactttgatatttgtgccaatac 12610  T

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Target: scaffold0618 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 8948 - 8915
Alignment:
Q  148 actttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||||||||||||||||||||||||||||    
T  8948 actttctctctctattgctttgatttttgtgtca 8915  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 76659 - 76565
Alignment:
Q  104 aatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    ||||||||| |||||||| ||||| |||  |||||||       |||||||||||||||||||||| |||||||| || ||| || |||||||||    
T  76659 aatttttgtgacaactttctctctcatacccacattatcttttcactttctctctctattgctttggtttttgtgccactacctcatttcctttg 76565  T

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Target: scaffold0519 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 11859 - 11907
Alignment:
Q  150 tttctctctctattgctttgatttttgtgtcaatacttcgtttcctttg 198  Q
    |||||||||||||||||||| ||||||||||||||| || ||| |||||    
T  11859 tttctctctctattgctttggtttttgtgtcaatacctcattttctttg 11907  T

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Target: scaffold0201 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 8502 - 8581
Alignment:
Q  102 acaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtca 181  Q
    ||||||||| | |||||||| ||||| ||| |||||||        ||||||||| ||||||||||||||||||||||||    
T  8502 acaatttttatgacaactttctctctcatactcacattgtccttctactttctctttctattgctttgatttttgtgtca 8581  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 469682 - 469596
Alignment:
Q  99 ttgacaatttttgtaacaactttatctcttatattcacattannnnnnnactttctctctctattgctttgatttttgtgtcaatac 185  Q
    |||| ||||||||| |||||||| ||||| | | ||||||||       |||||||||||| ||| ||||||||||||| |||||||    
T  469682 ttgataatttttgtgacaactttctctctcacactcacattatgttattactttctctctccattactttgatttttgtatcaatac 469596  T

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