View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9936_low_15 (Length: 410)

Name: NF9936_low_15
Description: NF9936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9936_low_15
NF9936_low_15
[»] chr3 (74 HSPs)
chr3 (110-392)||(31793800-31794075)
chr3 (237-357)||(25631641-25631762)
chr3 (251-357)||(38440691-38440798)
chr3 (237-357)||(12115933-12116054)
chr3 (237-357)||(2342332-2342452)
chr3 (87-202)||(33206752-33206868)
chr3 (237-357)||(38855151-38855271)
chr3 (237-356)||(46934482-46934602)
chr3 (241-351)||(49552343-49552453)
chr3 (253-357)||(4172422-4172527)
chr3 (90-207)||(48173284-48173402)
chr3 (106-202)||(14417883-14417979)
chr3 (240-357)||(14464350-14464468)
chr3 (88-197)||(49146080-49146190)
chr3 (237-357)||(4178404-4178525)
chr3 (237-357)||(39917510-39917631)
chr3 (237-357)||(44907513-44907634)
chr3 (310-357)||(32607381-32607428)
chr3 (237-355)||(36905961-36906080)
chr3 (106-197)||(37059462-37059553)
chr3 (240-357)||(3850569-3850686)
chr3 (162-208)||(48558757-48558803)
chr3 (318-355)||(17237724-17237761)
chr3 (237-357)||(25162276-25162396)
chr3 (237-357)||(25849660-25849781)
chr3 (86-197)||(8475409-8475521)
chr3 (109-205)||(15498224-15498320)
chr3 (87-202)||(17439949-17440065)
chr3 (313-357)||(35499315-35499359)
chr3 (87-202)||(45713475-45713591)
chr3 (234-357)||(50611531-50611655)
chr3 (87-197)||(32508783-32508894)
chr3 (89-202)||(47191369-47191484)
chr3 (85-199)||(49639021-49639136)
chr3 (234-336)||(51202384-51202487)
chr3 (105-202)||(42832046-42832137)
chr3 (105-202)||(34344762-34344858)
chr3 (85-133)||(41121864-41121913)
chr3 (265-357)||(42719389-42719481)
chr3 (105-197)||(335019-335111)
chr3 (87-198)||(13616062-13616174)
chr3 (313-357)||(29503379-29503423)
chr3 (162-202)||(43566780-43566820)
chr3 (162-202)||(46328908-46328948)
chr3 (92-147)||(51399950-51400006)
chr3 (87-130)||(54983765-54983809)
chr3 (162-205)||(363014-363057)
chr3 (85-131)||(20623832-20623879)
chr3 (163-202)||(24751512-24751551)
chr3 (163-202)||(36256663-36256702)
chr3 (240-346)||(36735277-36735384)
chr3 (252-357)||(37169085-37169192)
chr3 (268-357)||(46178447-46178538)
chr3 (162-197)||(53472696-53472731)
chr3 (304-351)||(53706405-53706452)
chr3 (151-205)||(50144587-50144641)
chr3 (165-198)||(2391530-2391563)
chr3 (165-198)||(2393291-2393324)
chr3 (86-194)||(2564915-2565024)
chr3 (86-197)||(16006495-16006607)
chr3 (85-133)||(16278004-16278053)
chr3 (105-190)||(20244148-20244233)
chr3 (313-346)||(22802938-22802971)
chr3 (324-357)||(33579772-33579805)
chr3 (105-202)||(39492835-39492932)
chr3 (162-199)||(43774256-43774293)
chr3 (324-352)||(7546516-7546544)
chr3 (313-357)||(21488028-21488072)
chr3 (162-202)||(28206521-28206561)
chr3 (90-133)||(29507215-29507259)
chr3 (174-202)||(30058820-30058848)
chr3 (91-134)||(40786279-40786323)
chr3 (162-202)||(40786351-40786391)
chr3 (161-197)||(42909192-42909228)
[»] chr6 (41 HSPs)
chr6 (235-357)||(33109674-33109797)
chr6 (237-357)||(8496807-8496928)
chr6 (237-357)||(12652782-12652903)
chr6 (237-357)||(25064077-25064198)
chr6 (237-357)||(23947431-23947552)
chr6 (87-198)||(30566053-30566165)
chr6 (87-199)||(12089092-12089205)
chr6 (237-358)||(16419001-16419122)
chr6 (242-355)||(33740694-33740808)
chr6 (234-352)||(4984697-4984815)
chr6 (237-357)||(4088301-4088423)
chr6 (313-357)||(8196521-8196565)
chr6 (87-202)||(9491719-9491835)
chr6 (253-357)||(7876159-7876264)
chr6 (253-357)||(7881217-7881322)
chr6 (239-355)||(12165685-12165802)
chr6 (313-357)||(8028232-8028276)
chr6 (91-198)||(12127897-12128005)
chr6 (87-198)||(22389738-22389850)
chr6 (318-357)||(4468483-4468522)
chr6 (87-133)||(6025439-6025486)
chr6 (322-357)||(17334703-17334738)
chr6 (237-357)||(10228522-10228642)
chr6 (261-357)||(17237398-17237495)
chr6 (105-202)||(18904667-18904764)
chr6 (105-198)||(19165365-19165457)
chr6 (86-134)||(19642599-19642648)
chr6 (162-202)||(5134418-5134458)
chr6 (90-133)||(5288398-5288442)
chr6 (313-357)||(13436706-13436750)
chr6 (162-202)||(25020512-25020552)
chr6 (88-207)||(35190759-35190879)
chr6 (162-197)||(18631543-18631578)
chr6 (91-133)||(5678265-5678307)
chr6 (162-208)||(16251501-16251547)
chr6 (162-198)||(6530192-6530228)
chr6 (86-133)||(7563629-7563677)
chr6 (325-357)||(9508830-9508862)
chr6 (174-202)||(18991426-18991454)
chr6 (86-133)||(32057028-32057076)
chr6 (313-357)||(35001509-35001553)
[»] chr1 (70 HSPs)
chr1 (237-357)||(18569424-18569545)
chr1 (240-357)||(30878924-30879042)
chr1 (234-357)||(51868759-51868883)
chr1 (86-205)||(20357454-20357573)
chr1 (86-205)||(20562382-20562501)
chr1 (237-357)||(35584735-35584856)
chr1 (240-357)||(50272254-50272372)
chr1 (237-357)||(7342568-7342689)
chr1 (234-357)||(44637264-44637389)
chr1 (237-357)||(51871711-51871831)
chr1 (92-202)||(19793526-19793637)
chr1 (87-205)||(42831942-42832061)
chr1 (240-357)||(9172337-9172455)
chr1 (240-357)||(9180319-9180437)
chr1 (237-357)||(19723180-19723300)
chr1 (240-357)||(30818459-30818577)
chr1 (143-205)||(39994829-39994891)
chr1 (241-357)||(45805923-45806041)
chr1 (241-349)||(5324679-5324788)
chr1 (105-202)||(15368819-15368916)
chr1 (90-205)||(4429463-4429579)
chr1 (87-202)||(15774296-15774412)
chr1 (110-202)||(18309567-18309659)
chr1 (313-357)||(28035062-28035106)
chr1 (313-357)||(34519056-34519100)
chr1 (237-357)||(38520647-38520769)
chr1 (237-355)||(50166215-50166333)
chr1 (240-357)||(5701106-5701224)
chr1 (234-355)||(19716013-19716134)
chr1 (240-357)||(25406398-25406516)
chr1 (244-357)||(25728073-25728187)
chr1 (319-357)||(27872668-27872706)
chr1 (86-202)||(38019931-38020049)
chr1 (237-357)||(40646534-40646655)
chr1 (237-357)||(40881127-40881248)
chr1 (237-357)||(45426176-45426298)
chr1 (241-357)||(50148222-50148339)
chr1 (313-357)||(9919312-9919356)
chr1 (237-357)||(11453781-11453903)
chr1 (87-130)||(12073133-12073177)
chr1 (313-357)||(14545443-14545487)
chr1 (313-357)||(20266225-20266269)
chr1 (87-202)||(37490885-37491001)
chr1 (87-202)||(46116158-46116274)
chr1 (318-357)||(3871337-3871376)
chr1 (88-202)||(48110525-48110640)
chr1 (248-357)||(7312212-7312322)
chr1 (105-199)||(33059480-33059573)
chr1 (105-202)||(37733769-37733866)
chr1 (313-357)||(7997710-7997754)
chr1 (90-133)||(8261728-8261772)
chr1 (91-202)||(8364392-8364504)
chr1 (87-133)||(12866118-12866165)
chr1 (87-133)||(18923938-18923985)
chr1 (162-205)||(32711125-32711168)
chr1 (162-201)||(39433429-39433468)
chr1 (87-133)||(49251448-49251495)
chr1 (86-198)||(21884569-21884682)
chr1 (162-203)||(23345040-23345081)
chr1 (320-357)||(33291532-33291569)
chr1 (162-202)||(3532958-3532998)
chr1 (313-357)||(5600698-5600742)
chr1 (162-202)||(11405527-11405567)
chr1 (86-133)||(24661976-24662024)
chr1 (329-357)||(31836745-31836773)
chr1 (324-352)||(34413247-34413275)
chr1 (162-202)||(35593834-35593874)
chr1 (324-352)||(48750096-48750124)
chr1 (87-134)||(49010752-49010800)
chr1 (162-202)||(50755415-50755455)
[»] chr7 (68 HSPs)
chr7 (234-357)||(21266231-21266355)
chr7 (237-357)||(42311122-42311243)
chr7 (237-357)||(2843341-2843462)
chr7 (237-357)||(32684527-32684648)
chr7 (234-357)||(35496289-35496413)
chr7 (87-208)||(25818281-25818403)
chr7 (234-357)||(48207743-48207865)
chr7 (237-357)||(433806-433925)
chr7 (240-357)||(20116428-20116546)
chr7 (237-357)||(1485370-1485491)
chr7 (241-357)||(26492211-26492328)
chr7 (237-357)||(26583556-26583677)
chr7 (237-357)||(46821856-46821977)
chr7 (240-357)||(46338898-46339016)
chr7 (237-357)||(1448943-1449064)
chr7 (237-357)||(22927984-22928105)
chr7 (235-355)||(42067176-42067297)
chr7 (86-194)||(45198090-45198199)
chr7 (234-355)||(6001859-6001983)
chr7 (87-202)||(34948101-34948217)
chr7 (313-357)||(35667345-35667389)
chr7 (87-205)||(21925470-21925589)
chr7 (240-352)||(14627998-14628112)
chr7 (282-358)||(3860840-3860916)
chr7 (87-202)||(29778976-29779092)
chr7 (87-198)||(30644164-30644276)
chr7 (313-352)||(5546278-5546317)
chr7 (86-198)||(22741197-22741312)
chr7 (267-357)||(23425485-23425576)
chr7 (241-357)||(31235905-31236024)
chr7 (87-133)||(36316027-36316074)
chr7 (90-202)||(2261468-2261581)
chr7 (87-131)||(32387180-32387225)
chr7 (318-355)||(32522042-32522079)
chr7 (106-202)||(5787476-5787572)
chr7 (162-202)||(21285337-21285377)
chr7 (162-202)||(29658256-29658296)
chr7 (105-201)||(38792226-38792322)
chr7 (87-133)||(30741559-30741606)
chr7 (87-133)||(38778732-38778779)
chr7 (87-133)||(43970906-43970953)
chr7 (325-355)||(7640898-7640928)
chr7 (86-131)||(14967689-14967735)
chr7 (86-131)||(15397165-15397211)
chr7 (87-203)||(25711113-25711231)
chr7 (116-198)||(38451888-38451970)
chr7 (162-208)||(43902514-43902560)
chr7 (117-202)||(14102487-14102572)
chr7 (117-202)||(14412504-14412589)
chr7 (105-202)||(17900863-17900960)
chr7 (86-198)||(22965946-22966059)
chr7 (320-357)||(23085447-23085484)
chr7 (153-202)||(38025403-38025452)
chr7 (87-131)||(49012393-49012438)
chr7 (313-357)||(1097717-1097761)
chr7 (324-352)||(1749300-1749328)
chr7 (162-202)||(2366428-2366468)
chr7 (87-130)||(8195910-8195954)
chr7 (324-352)||(22742844-22742872)
chr7 (324-352)||(24351000-24351028)
chr7 (324-352)||(28476127-28476155)
chr7 (165-205)||(30604401-30604441)
chr7 (174-202)||(33202538-33202566)
chr7 (165-205)||(35368470-35368510)
chr7 (313-357)||(36143785-36143829)
chr7 (169-197)||(41832953-41832981)
chr7 (162-202)||(47403572-47403612)
chr7 (324-352)||(48930686-48930714)
[»] chr2 (78 HSPs)
chr2 (235-358)||(3725025-3725149)
chr2 (234-357)||(40626141-40626265)
chr2 (236-355)||(459390-459510)
chr2 (86-202)||(22538533-22538650)
chr2 (237-357)||(27249265-27249386)
chr2 (234-357)||(8971740-8971866)
chr2 (237-357)||(6173478-6173599)
chr2 (237-357)||(21570522-21570643)
chr2 (237-357)||(9986459-9986582)
chr2 (87-202)||(17154644-17154760)
chr2 (87-202)||(33001537-33001653)
chr2 (237-357)||(34598833-34598955)
chr2 (237-357)||(2808584-2808705)
chr2 (237-357)||(30420523-30420644)
chr2 (241-357)||(36233855-36233972)
chr2 (237-357)||(45128051-45128171)
chr2 (87-202)||(580767-580883)
chr2 (235-357)||(40660045-40660165)
chr2 (90-192)||(10207643-10207746)
chr2 (88-202)||(17115528-17115643)
chr2 (87-202)||(8234776-8234892)
chr2 (313-357)||(31581833-31581877)
chr2 (106-202)||(44422122-44422218)
chr2 (85-202)||(15392195-15392313)
chr2 (88-202)||(20122459-20122574)
chr2 (237-355)||(41712881-41713000)
chr2 (237-357)||(32680696-32680816)
chr2 (237-330)||(33229129-33229223)
chr2 (112-202)||(41195926-41196016)
chr2 (85-133)||(31564088-31564137)
chr2 (86-198)||(34620512-34620625)
chr2 (313-357)||(22421659-22421703)
chr2 (313-357)||(26025523-26025567)
chr2 (313-357)||(42949638-42949682)
chr2 (322-357)||(3270342-3270377)
chr2 (87-133)||(10262734-10262781)
chr2 (313-356)||(18694971-18695014)
chr2 (92-205)||(16028089-16028203)
chr2 (319-357)||(27949352-27949390)
chr2 (87-196)||(30474185-30474295)
chr2 (234-287)||(10248008-10248061)
chr2 (151-208)||(11837049-11837106)
chr2 (237-357)||(32913088-32913209)
chr2 (86-130)||(38402791-38402836)
chr2 (162-202)||(3179395-3179435)
chr2 (86-133)||(25050293-25050341)
chr2 (90-133)||(26807137-26807181)
chr2 (313-357)||(27477078-27477122)
chr2 (90-145)||(36481067-36481123)
chr2 (313-357)||(39641973-39642017)
chr2 (87-205)||(1836583-1836702)
chr2 (87-133)||(3179319-3179366)
chr2 (313-352)||(4192762-4192801)
chr2 (241-355)||(7015826-7015941)
chr2 (83-133)||(22297505-22297556)
chr2 (91-133)||(41699101-41699144)
chr2 (322-352)||(3308851-3308881)
chr2 (162-208)||(18255692-18255738)
chr2 (314-356)||(30923589-30923631)
chr2 (162-199)||(2557570-2557607)
chr2 (313-357)||(8308098-8308140)
chr2 (162-199)||(11133147-11133184)
chr2 (295-356)||(13719274-13719335)
chr2 (85-133)||(15690087-15690136)
chr2 (156-197)||(30471960-30472001)
chr2 (105-198)||(32943353-32943446)
chr2 (86-130)||(33956250-33956295)
chr2 (162-202)||(3021073-3021113)
chr2 (162-202)||(3037606-3037646)
chr2 (313-357)||(4228055-4228099)
chr2 (313-357)||(8805790-8805834)
chr2 (313-357)||(9418345-9418388)
chr2 (324-352)||(10237370-10237398)
chr2 (156-208)||(18209919-18209971)
chr2 (237-357)||(25086880-25087005)
chr2 (86-133)||(27495532-27495580)
chr2 (162-202)||(34018054-34018094)
chr2 (165-205)||(44721685-44721725)
[»] chr8 (59 HSPs)
chr8 (237-357)||(33342286-33342408)
chr8 (237-355)||(9498718-9498836)
chr8 (241-357)||(11725535-11725652)
chr8 (241-357)||(11196745-11196860)
chr8 (237-357)||(15597280-15597402)
chr8 (237-357)||(44100046-44100167)
chr8 (237-357)||(44577885-44578006)
chr8 (241-355)||(9619474-9619589)
chr8 (237-357)||(28239681-28239804)
chr8 (240-357)||(4808816-4808934)
chr8 (237-358)||(17949096-17949218)
chr8 (234-357)||(35580303-35580428)
chr8 (237-357)||(43890239-43890360)
chr8 (86-208)||(30461530-30461653)
chr8 (239-357)||(32724603-32724723)
chr8 (87-199)||(17987436-17987549)
chr8 (91-195)||(26703881-26703986)
chr8 (87-198)||(4798529-4798641)
chr8 (87-202)||(15042349-15042465)
chr8 (240-357)||(33298705-33298826)
chr8 (87-202)||(40249862-40249980)
chr8 (86-199)||(10970260-10970374)
chr8 (85-202)||(39484354-39484472)
chr8 (241-357)||(2655722-2655839)
chr8 (237-357)||(14907038-14907159)
chr8 (105-202)||(24074520-24074617)
chr8 (237-357)||(42448142-42448263)
chr8 (87-202)||(8682376-8682492)
chr8 (314-353)||(12184212-12184251)
chr8 (314-353)||(12428640-12428679)
chr8 (310-357)||(43192459-43192506)
chr8 (162-205)||(43468686-43468729)
chr8 (162-205)||(44360918-44360961)
chr8 (322-356)||(19876147-19876181)
chr8 (313-355)||(37565995-37566037)
chr8 (153-206)||(6064439-6064492)
chr8 (253-357)||(9072582-9072687)
chr8 (86-202)||(24608467-24608584)
chr8 (237-357)||(33895931-33896051)
chr8 (121-198)||(36359706-36359783)
chr8 (87-194)||(3379640-3379746)
chr8 (87-202)||(9524952-9525068)
chr8 (86-133)||(28465612-28465660)
chr8 (87-133)||(23857377-23857424)
chr8 (87-133)||(27822065-27822112)
chr8 (162-205)||(33982261-33982304)
chr8 (96-134)||(40329657-40329696)
chr8 (241-346)||(16794147-16794252)
chr8 (241-357)||(34611657-34611774)
chr8 (161-202)||(13702336-13702377)
chr8 (87-131)||(29108657-29108702)
chr8 (87-131)||(41225720-41225765)
chr8 (165-205)||(5245552-5245592)
chr8 (162-202)||(7649599-7649639)
chr8 (324-352)||(14585606-14585634)
chr8 (324-352)||(26469351-26469379)
chr8 (237-352)||(27747231-27747347)
chr8 (323-355)||(39153261-39153293)
chr8 (90-133)||(42761918-42761962)
[»] chr4 (88 HSPs)
chr4 (234-355)||(9528994-9529116)
chr4 (237-357)||(35965088-35965210)
chr4 (237-357)||(1531760-1531882)
chr4 (86-198)||(3465577-3465690)
chr4 (87-202)||(33944347-33944463)
chr4 (87-190)||(53291437-53291541)
chr4 (237-357)||(10389867-10389988)
chr4 (237-357)||(9283765-9283886)
chr4 (237-357)||(47416738-47416859)
chr4 (87-202)||(20753109-20753225)
chr4 (237-355)||(38706826-38706945)
chr4 (87-202)||(44074849-44074964)
chr4 (252-357)||(34024550-34024656)
chr4 (237-357)||(9645663-9645784)
chr4 (244-357)||(51317846-51317961)
chr4 (237-357)||(53616765-53616886)
chr4 (313-357)||(8009473-8009517)
chr4 (87-202)||(17859773-17859889)
chr4 (254-357)||(20569123-20569227)
chr4 (84-195)||(24234065-24234177)
chr4 (313-357)||(25273811-25273855)
chr4 (313-357)||(43154135-43154179)
chr4 (87-194)||(47017938-47018046)
chr4 (237-357)||(56194450-56194574)
chr4 (320-357)||(2624436-2624473)
chr4 (86-198)||(9285647-9285760)
chr4 (237-355)||(21090006-21090126)
chr4 (237-357)||(43444247-43444368)
chr4 (86-198)||(55656096-55656209)
chr4 (237-357)||(4643710-4643832)
chr4 (237-356)||(6972664-6972783)
chr4 (313-357)||(29965565-29965609)
chr4 (237-357)||(50766623-50766746)
chr4 (261-355)||(2115704-2115799)
chr4 (237-346)||(5333656-5333763)
chr4 (87-133)||(9172424-9172471)
chr4 (162-205)||(12820386-12820429)
chr4 (85-202)||(20266855-20266974)
chr4 (105-196)||(34773673-34773764)
chr4 (318-357)||(46991244-46991283)
chr4 (88-198)||(52560760-52560871)
chr4 (237-357)||(868011-868139)
chr4 (86-202)||(5430348-5430466)
chr4 (241-357)||(10359660-10359778)
chr4 (162-208)||(27584036-27584082)
chr4 (85-202)||(32885681-32885799)
chr4 (93-202)||(49280653-49280763)
chr4 (85-202)||(56546433-56546551)
chr4 (313-350)||(14183734-14183771)
chr4 (318-355)||(21405449-21405486)
chr4 (162-203)||(31152589-31152630)
chr4 (241-357)||(31381785-31381902)
chr4 (85-133)||(50657873-50657922)
chr4 (282-357)||(12265355-12265431)
chr4 (310-346)||(18139038-18139074)
chr4 (162-202)||(31578088-31578128)
chr4 (313-357)||(37188706-37188750)
chr4 (162-202)||(39992906-39992946)
chr4 (87-194)||(40082215-40082323)
chr4 (310-346)||(49126251-49126287)
chr4 (313-352)||(1008226-1008265)
chr4 (86-208)||(12868005-12868127)
chr4 (237-359)||(27593950-27594071)
chr4 (87-133)||(52743223-52743270)
chr4 (313-352)||(52978738-52978777)
chr4 (313-355)||(49072873-49072915)
chr4 (86-202)||(548871-548988)
chr4 (241-301)||(3338833-3338894)
chr4 (86-202)||(21476065-21476182)
chr4 (94-131)||(35112711-35112748)
chr4 (322-355)||(35261132-35261165)
chr4 (149-202)||(54304913-54304966)
chr4 (162-207)||(56314832-56314877)
chr4 (156-200)||(438364-438408)
chr4 (174-202)||(2487370-2487398)
chr4 (237-277)||(2624351-2624391)
chr4 (162-202)||(15021496-15021536)
chr4 (324-352)||(27651872-27651900)
chr4 (162-202)||(28221291-28221331)
chr4 (162-202)||(30152185-30152225)
chr4 (162-202)||(30295584-30295624)
chr4 (162-202)||(30324486-30324526)
chr4 (162-202)||(31156204-31156244)
chr4 (313-357)||(32952860-32952904)
chr4 (162-202)||(36008346-36008386)
chr4 (162-202)||(36257765-36257805)
chr4 (313-357)||(49680468-49680512)
chr4 (324-352)||(52944236-52944264)
[»] scaffold0311 (1 HSPs)
scaffold0311 (238-357)||(8563-8683)
[»] scaffold0003 (1 HSPs)
scaffold0003 (234-354)||(361913-362032)
[»] chr5 (74 HSPs)
chr5 (237-357)||(7241627-7241748)
chr5 (237-357)||(7246803-7246924)
chr5 (241-357)||(7887051-7887168)
chr5 (237-357)||(27266974-27267095)
chr5 (241-357)||(28235434-28235551)
chr5 (237-357)||(30371569-30371690)
chr5 (238-357)||(34881556-34881675)
chr5 (105-208)||(42455372-42455475)
chr5 (237-357)||(18677580-18677701)
chr5 (241-357)||(36344603-36344720)
chr5 (92-202)||(29096292-29096403)
chr5 (237-357)||(7150449-7150570)
chr5 (84-202)||(33800885-33801004)
chr5 (234-346)||(11767648-11767762)
chr5 (268-357)||(43261931-43262021)
chr5 (254-357)||(6445798-6445902)
chr5 (313-357)||(20257808-20257852)
chr5 (87-198)||(20945879-20945991)
chr5 (91-202)||(30403749-30403861)
chr5 (84-202)||(33729769-33729889)
chr5 (256-357)||(10649317-10649419)
chr5 (241-357)||(26578098-26578215)
chr5 (109-202)||(6014797-6014890)
chr5 (87-202)||(21017587-21017706)
chr5 (86-202)||(27219547-27219664)
chr5 (321-357)||(1696980-1697016)
chr5 (313-357)||(2057952-2057996)
chr5 (87-198)||(19058992-19059104)
chr5 (313-357)||(30298130-30298174)
chr5 (106-202)||(32158398-32158494)
chr5 (162-205)||(2029109-2029152)
chr5 (237-355)||(21060397-21060516)
chr5 (87-133)||(22599988-22600035)
chr5 (322-357)||(35475450-35475485)
chr5 (320-355)||(42579809-42579844)
chr5 (162-205)||(43166740-43166783)
chr5 (240-357)||(16981138-16981256)
chr5 (237-350)||(19281065-19281179)
chr5 (105-198)||(6671774-6671867)
chr5 (86-202)||(18477997-18478114)
chr5 (313-357)||(19259926-19259971)
chr5 (316-357)||(27751851-27751892)
chr5 (313-357)||(781311-781355)
chr5 (313-353)||(3271526-3271566)
chr5 (313-392)||(7613128-7613214)
chr5 (86-133)||(9176839-9176887)
chr5 (87-134)||(9577297-9577345)
chr5 (162-202)||(9577364-9577404)
chr5 (313-357)||(27576463-27576507)
chr5 (117-202)||(37986849-37986936)
chr5 (165-205)||(42070454-42070494)
chr5 (151-202)||(6806624-6806675)
chr5 (87-133)||(36888146-36888193)
chr5 (237-355)||(42432745-42432864)
chr5 (323-357)||(10148730-10148764)
chr5 (116-202)||(10943741-10943827)
chr5 (88-133)||(18872517-18872563)
chr5 (313-355)||(42886401-42886443)
chr5 (162-199)||(1244714-1244751)
chr5 (86-194)||(21959371-21959480)
chr5 (241-301)||(35676245-35676306)
chr5 (313-357)||(1582235-1582279)
chr5 (313-357)||(1602536-1602580)
chr5 (324-352)||(2979469-2979497)
chr5 (324-352)||(14211134-14211162)
chr5 (324-352)||(28541069-28541097)
chr5 (86-133)||(29329017-29329065)
chr5 (174-202)||(29331326-29331354)
chr5 (180-208)||(31556909-31556937)
chr5 (90-133)||(31934928-31934972)
chr5 (313-357)||(35631804-35631848)
chr5 (162-202)||(38618665-38618705)
chr5 (324-352)||(39567199-39567227)
chr5 (86-133)||(42801494-42801542)
[»] scaffold1086 (1 HSPs)
scaffold1086 (87-198)||(2483-2595)
[»] scaffold0426 (1 HSPs)
scaffold0426 (234-351)||(6178-6295)
[»] scaffold1990 (1 HSPs)
scaffold1990 (106-198)||(909-1001)
[»] scaffold0092 (1 HSPs)
scaffold0092 (106-198)||(47305-47397)
[»] scaffold0039 (1 HSPs)
scaffold0039 (87-198)||(101826-101938)
[»] scaffold0146 (1 HSPs)
scaffold0146 (318-355)||(16438-16475)
[»] scaffold0014 (1 HSPs)
scaffold0014 (313-357)||(201485-201529)
[»] scaffold0533 (1 HSPs)
scaffold0533 (162-205)||(9397-9440)
[»] scaffold0495 (1 HSPs)
scaffold0495 (237-357)||(5241-5361)
[»] scaffold0178 (1 HSPs)
scaffold0178 (91-207)||(4322-4439)
[»] scaffold0006 (1 HSPs)
scaffold0006 (86-133)||(159008-159056)
[»] scaffold0888 (1 HSPs)
scaffold0888 (324-352)||(1831-1859)


Alignment Details
Target: chr3 (Bit Score: 174; Significance: 2e-93; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 110 - 392
Target Start/End: Original strand, 31793800 - 31794075
Alignment:
Q  110 taggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggctatctaacn 209  Q
    |||||||||| ||||||||||| |||||| || ||| | ||||||||||| ||| ||||||||          ||||||||||||||||||||||| ||     
T  31793800 taggataatgtattattatatgtatagaccggggttcgaatcccggacatctcatttatccacc---------gaattctagccactaggctatctgaca 31793890  T
Q  210 nnnnnnn--ctataattacaattgaactttaggttttctcttccagtttctttattgaagggtggttttgagtcatttttaaccttaaatcatctctctt 307  Q
             ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31793891 aaaaaaaaactataattacaattgaactttaggttttctcttccagtttctttattgacgggtggttttgagtcatttttaaccttaaatcatctctctt 31793990  T
Q  308 tgtcattttttctctatttcaatctaaataagtgattttcacatagatcttcctcgtgattttgtcatctgagtgtagtggtgtg 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31793991 tgtcattttttctctatttcaatctaaataagtgattttcacatagatcttcctcgtgattttgtcatctgagtgtagtggtgtg 31794075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 25631762 - 25631641
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| |  |||||| ||||| ||||||||||| |||| ||||| |||| |||||||| ||||   || |||| ||||||||||||||||||    
T  25631762 taggttttctcttactatttcttcattgaggggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctctctatttcaatctaaa 25631663  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  25631662 taagtgattttcacatagatct 25631641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 38440798 - 38440691
Alignment:
Q  251 cagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcac 349  Q
    ||||||||| |||||| ||||||||||||||| || || |||| ||||||   |||||| || |||| ||||||||||||||||||||||||||||||||    
T  38440798 cagtttcttcattgaatggtggttttgagtcaattcttgacctgaaatcactcctctttatctttttctctctatttcaatctaaataagtgattttcac 38440699  T
Q  350 atagatct 357  Q
    ||||||||    
T  38440698 atagatct 38440691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 12115933 - 12116054
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||| || || |||||| ||||| |||||||||||||||| || || |||| ||||||||||||||  || |||  ||| ||||||||||||||    
T  12115933 taggttttcttttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcatctctcttcatcttttcctctttatttcaatctaaa 12116032  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||| ||||||    
T  12116033 taagtgattttcacaaagatct 12116054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 2342332 - 2342452
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcatttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaat 336  Q
    ||||||||||||| |||||||||  |||| ||||||||||| |||| || ||| | | ||||| | |||||  || |||| |||||||||||||||||||    
T  2342332 taggttttctcttacagtttcttcgttgaggggtggttttgggtcaattctaaacctgaatcaaccctcttcatctttttctctctatttcaatctaaat 2342431  T
Q  337 aagtgattttcacatagatct 357  Q
    |||||||||||||||| ||||    
T  2342432 aagtgattttcacatatatct 2342452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 33206752 - 33206868
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  | |||| ||| | | ||||||||   ||||||| ||| ||||||||||||    
T  33206752 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattcaccttataaggtgaa 33206851  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  33206852 ttctagccactaggcta 33206868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 38855271 - 38855151
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcatttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaat 336  Q
    ||||||||||||| |  |||||| ||||| ||||||||||| |||||| || |||  |||||| | |||||  || |||| ||||||| |||||||||||    
T  38855271 taggttttctcttactatttcttcattgaggggtggttttgggtcattcttgaccgaaaatcacccctcttcatctttttctctctatatcaatctaaat 38855172  T
Q  337 aagtgattttcacatagatct 357  Q
    |||||||||||||||||||||    
T  38855171 aagtgattttcacatagatct 38855151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 237 - 356
Target Start/End: Original strand, 46934482 - 46934602
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||||||| | |||||| ||||| ||||||||||  |||| ||||| |||| |||||| | |||||  || || | ||||||||||||||||||    
T  46934482 taggttttctcttctactttcttcattgaggggtggtttttggtcaatttttgacctgaaatcacccctcttcatctttctctctctatttcaatctaaa 46934581  T
Q  336 taagtgattttcacatagatc 356  Q
    |||||||||||||||||||||    
T  46934582 taagtgattttcacatagatc 46934602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 351
Target Start/End: Complemental strand, 49552453 - 49552343
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||||| ||||||| ||||| ||||||||||| |||| || || |||| |||||| | |||||  ||||||||||||||||||||||||||||||    
T  49552453 ttttctcttcc-gtttcttcattgatgggtggttttgggtcaattcttgacctgaaatcacccctcttcatcattttttctctatttcaatctaaataag 49552355  T
Q  340 tgattttcacat 351  Q
    ||| ||||||||    
T  49552354 tgaatttcacat 49552343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 4172422 - 4172527
Alignment:
Q  253 gtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacat 351  Q
    ||||||| ||||| ||||||||||| |||| || ||||| | ||||||||  ||||  || |||| ||||||||||||||||||||||||||||||||||    
T  4172422 gtttcttcattgaggggtggttttgggtcaattcttaacataaaatcatccatcttcatctttttctctctatttcaatctaaataagtgattttcacat 4172521  T
Q  352 agatct 357  Q
    ||||||    
T  4172522 agatct 4172527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 207
Target Start/End: Original strand, 48173284 - 48173402
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattc 188  Q
    ||||||||||| ||| ||||||| || |||||||||||||||| || |  ||||||| | | ||||||||  |||||||| ||| |||||||||||||||    
T  48173284 ccgtgagcatagctcagttggtaagacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttattcaccttataaggtgaattc 48173383  T
Q  189 tagccactaggctatctaa 207  Q
    ||||||||| |||| ||||    
T  48173384 tagccactaagctacctaa 48173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 14417883 - 14417979
Alignment:
Q  106 ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||||| ||||||||||||||||||  | |||||||| | | ||||||||   ||||||| ||| |||||||||||||||||||||||| ||||    
T  14417883 ttggtaggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaagcta 14417979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 14464350 - 14464468
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||| || || ||| || ||||||||||||||||| |||| || || |||| |||||| | || ||  || |||| ||| |||||||||||||||||    
T  14464350 gttttcttttacaattttttcattgaagggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataa 14464449  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||||||||    
T  14464450 gtgattttcacatagatct 14464468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 49146080 - 49146190
Alignment:
Q  88 tcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||  |   || ||| | | ||||||||   ||||||| |||||||||||||||||    
T  49146080 tcccgtgagcttaactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataaggtgaat 49146179  T
Q  187 tctagccacta 197  Q
    |||||||||||    
T  49146180 tctagccacta 49146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 4178404 - 4178525
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||| | ||||||| ||||| ||||||||||| |||| || || |||| |||||| |  ||||  || |||| ||||||||||||||||||    
T  4178404 taggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcacccatcttcatctttttctctctatttcaatctaaa 4178503  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||| ||| ||||    
T  4178504 taagtgattttcagataaatct 4178525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 39917631 - 39917510
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||| ||| ||||||||| | ||| | ||||||||| |||| || || |||| ||||||||  ||||  |  |||| |||||| |||||||||||    
T  39917631 taggttttcccttacagtttcttcactgaggagtggttttgggtcaattcttgacctgaaatcatccatcttcatatttttctctctaattcaatctaaa 39917532  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  39917531 taagtgattttcacatagatct 39917510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 44907634 - 44907513
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||| | || ||||||  |||| ||||||||||| |||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  44907634 taggttttctcctacaatttcttctttgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaa 44907535  T
Q  336 taagtgattttcacatagatct 357  Q
     |||||||||||||||||||||    
T  44907534 caagtgattttcacatagatct 44907513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 32607381 - 32607428
Alignment:
Q  310 tcattttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  32607381 tcattttctctttatttcaatctaaataagtgattttcacatagatct 32607428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 36905961 - 36906080
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| || |||||||| |||| || || |||| |||||| |  ||||  || |||| ||| ||||||||| ||||    
T  36905961 taggttttctcttacaatttcttcattgatggatggttttgggtcaattcttgacctgaaatcacccttcttcatctttttctctttatttcaatataaa 36906060  T
Q  336 taagtgattttcacatagat 355  Q
    ||||||||||||||||||||    
T  36906061 taagtgattttcacatagat 36906080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 37059462 - 37059553
Alignment:
Q  106 ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccacta 197  Q
    ||||||||||||||||||||||||||||  | |||||||| | |||||| |||  |||||||| ||  ||||||| ||||||||| ||||||    
T  37059462 ttggtaggataatgcattattatatgcaggggctggagttcgaatcccgaacacctcacttattcatcttataagatgaattctaaccacta 37059553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 3850686 - 3850569
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||| |||  |||||||||||  |||||||||||  ||| || || |||| |||||| | |||||  || |||| |||||||||||||||||||||    
T  3850686 gttttctcatcccatttctttattgg-gggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataa 3850588  T
Q  339 gtgattttcacatagatct 357  Q
    |||| ||||||||||||||    
T  3850587 gtgactttcacatagatct 3850569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 48558757 - 48558803
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatctaac 208  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  48558757 cacttattcactttataaggtgaattatagccactaggctatctaac 48558803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 17237724 - 17237761
Alignment:
Q  318 tctctatttcaatctaaataagtgattttcacatagat 355  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17237724 tctctatttcaatctaaataagtgattttcacatagat 17237761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 25162276 - 25162396
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| ||||||||| | ||| ||||||||||| |||| || || |  | |||||| |  ||||  || |||| ||||||||||||||||||    
T  25162276 taggttttctcttacagtttcttcactgaggggtggttttgtgtcaattcttgatttgaaatcacccatcttcatctttttctctctatttcaatctaaa 25162375  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  25162376 taagtga-tttcacatagatct 25162396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 25849660 - 25849781
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||||||| ||||| ||||| ||||||||||||||| |||||| || | |||||| |  | || ||| |||| | |||||||||||  | |    
T  25849660 taggttttttcttccagcttcttaattgaggggtggttttgagtcaatttttgacttgaaatcacccttattcgtctttttctttctatttcaattcaga 25849759  T
Q  336 taagtgattttcacatagatct 357  Q
    |||||||| |||||||||||||    
T  25849760 taagtgatgttcacatagatct 25849781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 8475409 - 8475521
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    |||| |||||||||| ||| |||||||||| |||||||||| ||||||| ||   || ||||| ||||| |||||   |||||| || ||||||||||||    
T  8475409 agtctcgtgagcatagctcagttggtaggacaatgcattatgatatgcagaggtcggggtttgaatcccagacatccaacttattcagtttataaggtga 8475508  T
Q  185 attctagccacta 197  Q
    ||| |||||||||    
T  8475509 attatagccacta 8475521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 15498224 - 15498320
Alignment:
Q  109 gtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggctatct 205  Q
    |||||| |||||||||||||||| |  | | |||||| | | |||||||||| ||||||| ||  |||||| ||||||||||| |||||||||||||    
T  15498224 gtaggacaatgcattattatatgtaggggccggagttcgaaccccggacattccacttattcatcttataatgtgaattctagacactaggctatct 15498320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 17440065 - 17439949
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||  | | || ||||| | | |||| |   ||||||| ||| ||||||||||||    
T  17440065 gtcccgtgagcatagctcggttggtaggacaatgcattattatatgcaggggccggtgtttgaacctcggataccccacttattcaccttataaggtgaa 17439966  T
Q  186 ttctagccactaggcta 202  Q
    || || |||||||||||    
T  17439965 ttttaaccactaggcta 17439949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 35499359 - 35499315
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  35499359 ttttctctttatttcaatctaaataagtgattttcacatagatct 35499315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 45713475 - 45713591
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||  |||||||||| |||||||||||||||| |  | | |||||| | |  |||||||   ||||||| ||| ||||||||||||    
T  45713475 gtcccgtgagcataacttagttggtaggacaatgcattattatatgtaggggccggagttcgaactccggacaccccacttattcaccttataaggtgaa 45713574  T
Q  186 ttctagccactaggcta 202  Q
    ||||| | |||||||||    
T  45713575 ttctaactactaggcta 45713591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 357
Target Start/End: Complemental strand, 50611655 - 50611531
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    ||||| ||||||||||   ||||||| |||||  | |||||||| |||| || || |||| |||||| | |||||  || |||| ||| |||||||||||    
T  50611655 ctttaagttttctcttattgtttcttcattgagagatggttttgggtcaattattgacctaaaatcacccctcttcatctttttctctatatttcaatct 50611556  T
Q  333 aaataagtgattttcacatagatct 357  Q
    |||||||||||||||| ||||||||    
T  50611555 aaataagtgattttcatatagatct 50611531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 32508894 - 32508783
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||  |   || ||| | | |||| |||   ||||||| ||| ||||||||||||    
T  32508894 gtcccgtgagcctaactcagttgataggataatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataaggtgaa 32508795  T
Q  186 ttctagccacta 197  Q
    ||||||||||||    
T  32508794 ttctagccacta 32508783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 47191369 - 47191484
Alignment:
Q  89 cccgtgagcataactc-gttggtagg-ataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    |||||||||||| ||| ||||| ||| | ||||||||||||||||||  | |||||||| | | |||| |||   ||||||| ||| ||||||| |||||    
T  47191369 cccgtgagcatagctcagttggcagggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttattcaccttataagatgaat 47191468  T
Q  187 tctagccactaggcta 202  Q
    ||||||||||||||||    
T  47191469 tctagccactaggcta 47191484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 49639021 - 49639136
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtg 183  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||| |  | | || ||| | | |||| |||   ||||||| ||| || |||||||    
T  49639021 aagtcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccgaacaccccacttattcaccttgtaaggtg 49639120  T
Q  184 aattctagccactagg 199  Q
    ||||||||||||||||    
T  49639121 aattctagccactagg 49639136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 336
Target Start/End: Complemental strand, 51202487 - 51202384
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    |||||||||||||||| ||||||||||||||| ||||| ||||| ||| ||| || |||| |||||| |  ||||  |  |||| |||||||||||||||    
T  51202487 ctttaggttttctcttacagtttctttattgaggggtgattttgggtcaattcttgacctgaaatcacccatcttcatatttttctctctatttcaatct 51202388  T
Q  333 aaat 336  Q
    ||||    
T  51202387 aaat 51202384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 42832137 - 42832046
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||||||||||||||||||||||||       || ||| | | |||||||| | || |||| ||| |||||||||||||||||||||||||||||    
T  42832137 gttggtaggataatgcattattatatgcc------ggggttcgaaccccggacactccatttattcaccttataaggtgaattctagccactaggcta 42832046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 34344858 - 34344762
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||| ||||| ||||||||||||||||||    | |||||||  | ||||||||   ||||||| ||| |||||||||||||||||||||||||||||    
T  34344858 gttgataggacaatgcattattatatgcaggtgccggagttta-accccggacaccccacttattcaccttataaggtgaattctagccactaggcta 34344762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 41121864 - 41121913
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  41121864 aagtctcgtgagcataactcagttggtaggacaatgcattattatatgca 41121913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 42719389 - 42719481
Alignment:
Q  265 aagggtggttttgagtcatttttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||||||||||||||| ||| || |||| |||||| ||| |||| ||  |||| ||||||||||||| |||||||||||||||||  |||||||    
T  42719389 aagggtggttttgagttattcttgacctgaaatca-ctcatcttcgtatttttctctctatttcaatttaaataagtgattttcatgtagatct 42719481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 335111 - 335019
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccacta 197  Q
    |||||||||| |||||||||||||||| |  ||| |||||| | | || |||||   ||||||| ||| ||||||||||||||||||| ||||    
T  335111 gttggtaggacaatgcattattatatgtaaggaccggagttcgaaccctggacaccccacttattcaccttataaggtgaattctagctacta 335019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 13616174 - 13616062
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||| |  |   |||||| | | | ||||||   ||||||| ||  ||||||||||||    
T  13616174 gtcccgtgaacataactcggttggtaggacaatgcattattatatgtaggggtcggagttcgaacctcggacaccccacttattcatcttataaggtgaa 13616075  T
Q  186 ttctagccactag 198  Q
    |||||||||||||    
T  13616074 ttctagccactag 13616062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 29503379 - 29503423
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||    
T  29503379 ttttctctatatttcaatctaaataattgattttcacatagatct 29503423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 43566820 - 43566780
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  43566820 cacttattcaccttataaggtgaattctagccactaggcta 43566780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 46328948 - 46328908
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  46328948 cacttattcaccttataaggtgaattctagccactaggcta 46328908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 51399950 - 51400006
Alignment:
Q  92 gtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttg 147  Q
    ||||||||| ||| |||||||||||| |||||||||||||||| || ||||||||||    
T  51399950 gtgagcatagctcagttggtaggatattgcattattatatgcagaggctggagtttg 51400006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 54983809 - 54983765
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatat 130  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  54983809 gtcccgtgagcatagctcagttggtaggataatgcattattatat 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 363014 - 363057
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| |||||||||||||||||||||  |||||||||||||    
T  363014 cacttattcactttataaggtgaattctaatcactaggctatct 363057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 20623879 - 20623832
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatg 131  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  20623879 aagtcccgtgagcataactcagtttgtaggacaatgcattattatatg 20623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 24751512 - 24751551
Alignment:
Q  163 acttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  24751512 acttattcaccttataaggtgaattctagccactaggcta 24751551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 36256702 - 36256663
Alignment:
Q  163 acttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  36256702 acttattcaccttataaggtgaattctagccactaggcta 36256663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 346
Target Start/End: Complemental strand, 36735384 - 36735277
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||||||| |||||||| |||||  |||||||||  |||| ||||| |||| |||||||| |||||  |  || | ||| ||||||||| |||||||    
T  36735384 gttttctcttctagtttcttcattgagaggtggtttttggtcaattttttacctgaaatcatccctcttcatttttctctctatatttcaatttaaataa 36735285  T
Q  339 gtgatttt 346  Q
    ||||||||    
T  36735284 gtgatttt 36735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 252 - 357
Target Start/End: Original strand, 37169085 - 37169192
Alignment:
Q  252 agtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtga-ttttcac 349  Q
    |||||||| ||||| ||||| |||||  ||| ||||| |||| |||||| |||||||   | |||| |||||| |||||| ||||||||||| |||||||    
T  37169085 agtttcttcattgaggggtgattttggatcaattttttacctgaaatcacctctcttcacctttttctctctaattcaatataaataagtgatttttcac 37169184  T
Q  350 atagatct 357  Q
    ||||||||    
T  37169185 atagatct 37169192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 357
Target Start/End: Original strand, 46178447 - 46178538
Alignment:
Q  268 ggtggttttgagtcatttt-taaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtg-attttcacatagatct 357  Q
    |||||||||| |||| ||| | |||| |||||||| |||||  || |||| |||||| |||||||||||||||||  |||||||||||||||    
T  46178447 ggtggttttgggtcaatttatgacctgaaatcatccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatct 46178538  T

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Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 53472696 - 53472731
Alignment:
Q  162 cacttatccactttataaggtgaattctagccacta 197  Q
    ||||||| ||||||||||||||||||||||||||||    
T  53472696 cacttattcactttataaggtgaattctagccacta 53472731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 53706452 - 53706405
Alignment:
Q  304 tctttgtcattttttctctatttcaatctaaataagtgattttcacat 351  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||| ||||    
T  53706452 tctttgtcattttatctctatttcaatttaaataagtcatttttacat 53706405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 50144641 - 50144587
Alignment:
Q  151 cccggacatttcacttatccactttataaggtgaattctagccactaggctatct 205  Q
    |||||||| | ||||||| ||| ||||||||||||||||| ||||||| ||||||    
T  50144641 cccggacactccacttattcaccttataaggtgaattctacccactagactatct 50144587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 2391563 - 2391530
Alignment:
Q  165 ttatccactttataaggtgaattctagccactag 198  Q
    |||| |||||||||||||||||||||||||||||    
T  2391563 ttattcactttataaggtgaattctagccactag 2391530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 2393324 - 2393291
Alignment:
Q  165 ttatccactttataaggtgaattctagccactag 198  Q
    |||| |||||||||||||||||||||||||||||    
T  2393324 ttattcactttataaggtgaattctagccactag 2393291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 2564915 - 2565024
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||||||| |||||||| | | ||||||||||||||||  | | |  ||||| || | |||||   |||||||  ||||||||| ||||    
T  2564915 agtcccgtgagcataactcagttggtagaacagtgcattattatatgcaggggccgtggtttgaattctggacaccccacttatttactttataaagtga 2565014  T
Q  185 attctagcca 194  Q
    ||||||||||    
T  2565015 attctagcca 2565024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 197
Target Start/End: Complemental strand, 16006607 - 16006495
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagact-ggagtttgcatcccggacatttcacttatccactttataaggtg 183  Q
    ||||||||||||||||||| |||||||| | |||||||||| ||||||| ||| | || ||| | | ||| ||||   ||||||| ||| ||||||||||    
T  16006607 agtcccgtgagcataactcagttggtagaacaatgcattataatatgca-agagtcggggttcgaaccccagacaccccacttattcaccttataaggtg 16006509  T
Q  184 aattctagccacta 197  Q
    ||||||| ||||||    
T  16006508 aattctaaccacta 16006495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 16278053 - 16278004
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||||||||    
T  16278053 aagtcccgtgagcatagctcagttggtaggaccatgcattattatatgca 16278004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 20244148 - 20244233
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattcta 190  Q
    |||||||||| ||||||||||||||||||  | | || ||| | | |||||| | ||||| ||| ||| |||||||||||||||||    
T  20244148 gttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggatacttcacgtattcaccttataaggtgaattcta 20244233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 22802938 - 22802971
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgatttt 346  Q
    |||| |||||||||||||||||||||||||||||    
T  22802938 ttttctctctatttcaatctaaataagtgatttt 22802971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 33579772 - 33579805
Alignment:
Q  324 tttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||||||| ||||    
T  33579772 tttcaatctaaataagtgattttcacatatatct 33579805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 39492835 - 39492932
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||| ||||| ||||||||||||||||||| | |||| ||| | | ||| ||||   |||||||  || ||||||||||||||||| |||||| ||||    
T  39492835 gttgttaggacaatgcattattatatgcatgggctggggttcgaaccccagacaccccacttatttacgttataaggtgaattctaaccactaagcta 39492932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 43774256 - 43774293
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactagg 199  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  43774256 cacttattcaccttataaggtgaattctagccactagg 43774293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 7546516 - 7546544
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  7546516 tttcaatctaaataagtgattttcacata 7546544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 21488028 - 21488072
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| |||| |||||||||||||||||||| |||||| |||||||    
T  21488028 ttttctctccatttcaatctaaataagtgactttcacgtagatct 21488072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 28206561 - 28206521
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||||||||||||| |||||||||||    
T  28206561 cacttattcaccttataaggtgaattctaaccactaggcta 28206521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 29507215 - 29507259
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||| |||||| |||||||||| ||||||||||||||||||    
T  29507215 ccgtgagcttaactcagttggtaggacaatgcattattatatgca 29507259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 30058820 - 30058848
Alignment:
Q  174 ttataaggtgaattctagccactaggcta 202  Q
    |||||||||||||||||||||||||||||    
T  30058820 ttataaggtgaattctagccactaggcta 30058848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 40786279 - 40786323
Alignment:
Q  91 cgtgagcataactc-gttggtaggataatgcattattatatgcat 134  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||    
T  40786279 cgtgagcatagctcagttggtaggacaatgcattattatatgcat 40786323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 40786351 - 40786391
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| | ||||||||||||||||||| |||||||||||    
T  40786351 cacttattctctttataaggtgaattctaaccactaggcta 40786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 197
Target Start/End: Complemental strand, 42909228 - 42909192
Alignment:
Q  161 tcacttatccactttataaggtgaattctagccacta 197  Q
    |||||||| || |||||||||||||||||||||||||    
T  42909228 tcacttattcattttataaggtgaattctagccacta 42909192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 235 - 357
Target Start/End: Original strand, 33109674 - 33109797
Alignment:
Q  235 tttaggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatcta 333  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||| |||| ||||| ||  ||||  || |||| ||| ||||||||||||    
T  33109674 tttaggttttctcttccagtttcttcattgacgggtggttttgggtcaatttttgacctaaaatcgtccatcttcatctttttctctttatttcaatcta 33109773  T
Q  334 aataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||    
T  33109774 aataagtgattttcacatagatct 33109797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 8496807 - 8496928
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| |||||||||||||||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  8496807 taggttttctcttacaatttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaa 8496906  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  8496907 taagtgattttcacatagatct 8496928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 12652782 - 12652903
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||  ||||||||| ||||| ||||||||||| |||| || || |||| |||||| | |||||  || |||| ||||||||||||||||||    
T  12652782 taggttttctctcacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaa 12652881  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  12652882 taagtgattttcacatagatct 12652903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 25064077 - 25064198
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| ||||||||||| |||| || || |||| |||||| |||||||  || |||| ||| ||||||||||||||    
T  25064077 taggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacctctcttcatctttttctctttatttcaatctaaa 25064176  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  25064177 taagtgattttcacatagatct 25064198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 23947552 - 23947431
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| ||||| |||||||| ||||| ||||||||||| |||| || || |||| |||||| |  ||||  || |||| ||||||||||||||||||    
T  23947552 taggttttttcttctagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccatcttcatcgttttctctctatttcaatctaaa 23947453  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  23947452 taagtgattttcacatagatct 23947431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 30566053 - 30566165
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| ||  || |||||| | ||||||||   ||||||| ||| ||||||||||||    
T  30566053 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa 30566152  T
Q  186 ttctagccactag 198  Q
    ||| |||||||||    
T  30566153 ttccagccactag 30566165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 12089092 - 12089205
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  | | |||||| | | ||||||||   ||||||| ||| ||||||||||||    
T  12089092 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtgaa 12089191  T
Q  186 ttctagccactagg 199  Q
    ||||||||||||||    
T  12089192 ttctagccactagg 12089205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 16419001 - 16419122
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||| ||| ||||||| |||   |||||||||||||||| || ||||||| |||||| |  ||||  || |||| ||||||||||||||||||    
T  16419001 taggttttctcatcccgtttcttcatttg-gggtggttttgagtcaattcttaacctaaaatcacccatcttcatctttttctctctatttcaatctaaa 16419099  T
Q  336 taagtgattttcacatagatctt 358  Q
    ||||||| |||||||||||||||    
T  16419100 taagtgactttcacatagatctt 16419122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 355
Target Start/End: Complemental strand, 33740808 - 33740694
Alignment:
Q  242 tttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagt 340  Q
    |||||||| | ||||||| ||||| ||||||||||  |||| || || |||| |||||| | |||||  || |||| |||||||||||||||||||||||    
T  33740808 tttctcttactgtttcttcattgaggggtggtttttggtcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaataagt 33740709  T
Q  341 gattttcacatagat 355  Q
    |||||||||||||||    
T  33740708 gattttcacatagat 33740694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 352
Target Start/End: Complemental strand, 4984815 - 4984697
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatc 331  Q
    |||||||||||||||| ||||||||  ||||| ||||||||||| |||| || || |||| |||||| ||| ||||  || |||| ||||||||||||||    
T  4984815 ctttaggttttctcttacagtttctccattgaggggtggttttgggtcaattcttgacctgaaatca-ctcatcttcatc-ttttctctctatttcaatc 4984718  T
Q  332 taaataagtgattttcacata 352  Q
    |||||||||||||||||||||    
T  4984717 taaataagtgattttcacata 4984697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 4088301 - 4088423
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttt-tctctatttcaatctaa 334  Q
    |||||||||| || ||| ||||||||||| ||||||||||| |||| || || |||| |||||| |  ||||  |  ||||| |||||||| ||||||||    
T  4088301 taggttttcttttacaggttctttattgaggggtggttttgggtcaattcttgacctgaaatcacccatcttcattttttttatctctattacaatctaa 4088400  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||    
T  4088401 ataagtgattttcacatagatct 4088423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 8196565 - 8196521
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  8196565 ttttctctctatttcaatctaaataagtgattttcacatagatct 8196521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 9491835 - 9491719
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |  | | || ||| | | ||||||||   ||||||| ||| ||||||| ||||    
T  9491835 gtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataagatgaa 9491736  T
Q  186 ttctagccactaggcta 202  Q
    ||||| |||||||||||    
T  9491735 ttctaaccactaggcta 9491719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 7876264 - 7876159
Alignment:
Q  253 gtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacat 351  Q
    ||||||| ||||| |||||||||||  ||| || || |||| |||||| |  ||||  || |||| ||| ||||||||||||||||||||||||||||||    
T  7876264 gtttcttcattgaggggtggttttggatcaattattgacctaaaatcacccatcttcatctttttctctttatttcaatctaaataagtgattttcacat 7876165  T
Q  352 agatct 357  Q
    ||||||    
T  7876164 agatct 7876159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 357
Target Start/End: Complemental strand, 7881322 - 7881217
Alignment:
Q  253 gtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacat 351  Q
    ||||||| ||||| |||||||||||  ||| || || || | |||||| || ||||  || |||| ||| ||||||||||||||||||||||||||||||    
T  7881322 gtttcttcattgaggggtggttttggatcaattattgacttgaaatcacctttcttcatctttttctctttatttcaatctaaataagtgattttcacat 7881223  T
Q  352 agatct 357  Q
    ||||||    
T  7881222 agatct 7881217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 355
Target Start/End: Original strand, 12165685 - 12165802
Alignment:
Q  239 ggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaata 337  Q
    ||||||||||||||||||||| ||||| | ||  ||||| |||| || || |||| ||||||   |||||  || |||| |  |||||||||||||||||    
T  12165685 ggttttctcttccagtttcttcattgaggagttattttgggtcaattattgacctgaaatcactcctcttcatctttttatgcctatttcaatctaaata 12165784  T
Q  338 agtgattttcacatagat 355  Q
    ||||||||||||||||||    
T  12165785 agtgattttcacatagat 12165802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 8028276 - 8028232
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||    
T  8028276 ttttctctctgtttcaatctaaataagtgattttcacatagatct 8028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 12128005 - 12127897
Alignment:
Q  91 cgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattct 189  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||  |   ||| || | | ||||||||   ||||||| ||| ||||||||||||||||    
T  12128005 cgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggaattcgaaccccggacacgccacttattcaccttataaggtgaattct 12127906  T
Q  190 agccactag 198  Q
    |||||||||    
T  12127905 agccactag 12127897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 22389850 - 22389738
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  |    | ||| | ||||||||||   ||||||| ||| ||||||||||||    
T  22389850 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcaccttataaggtgaa 22389751  T
Q  186 ttctagccactag 198  Q
    |||||||| ||||    
T  22389750 ttctagccgctag 22389738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 4468483 - 4468522
Alignment:
Q  318 tctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  4468483 tctctatttcaatctaaataagtgattttcatatagatct 4468522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 6025486 - 6025439
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  6025486 gtcccgtaagcataactcagttggtaggataatgcattattatatgca 6025439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 357
Target Start/End: Original strand, 17334703 - 17334738
Alignment:
Q  322 tatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||||||||||||||    
T  17334703 tatttcaatctaaataagtgattttcacatagatct 17334738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 10228522 - 10228642
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| |||| || || |||| |||||| | |||||  || || | |||||| |||||||||||    
T  10228522 taggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaa 10228620  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||| ||||| ||||    
T  10228621 taagtgacttttacatatatct 10228642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 357
Target Start/End: Complemental strand, 17237495 - 17237398
Alignment:
Q  261 attgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||| ||||||||||| |||| || || || | |||||| | |||||  || |||| ||| ||||||||||||||||||| ||||||||||||||||    
T  17237495 attgaggggtggttttgggtcaattcttgacatgaaatcacccctcttcatctttttctctatatttcaatctaaataagttattttcacatagatct 17237398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 18904764 - 18904667
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||| |||||||||||||||| || | | || ||| | |  | |||||   ||||||| ||| |||||||||||||||||||||||||||||    
T  18904764 gttggtaggacaatgcattattatatgtatgggccggggttcgaactctggacaccccacttattcaccttataaggtgaattctagccactaggcta 18904667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 19165365 - 19165457
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactag 198  Q
    |||||||||| |||||||||||||||||| ||  ||| ||| | | |||| |||   ||||||| ||| |||||||||||||||||||||||||    
T  19165365 gttggtaggacaatgcattattatatgcagaggttggggttcgaaccccg-acaccccacttattcaccttataaggtgaattctagccactag 19165457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 19642648 - 19642599
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcat 134  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  19642648 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcat 19642599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 5134458 - 5134418
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  5134458 cacttattcaccttataaggtgaattctagccactaggcta 5134418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 5288442 - 5288398
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  5288442 ccgtgagcataactcagttggtaggacaatgcattattatatgca 5288398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 13436706 - 13436750
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  13436706 ttttctctctatttcaatttaaataagtgattttcacataaatct 13436750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 25020552 - 25020512
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  25020552 cacttattcaccttataaggtgaattctagccactaggcta 25020512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 35190759 - 35190879
Alignment:
Q  88 tcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    |||| |||||||| ||| |||||||| | ||||||||||||||||||  |   |||||| | | |||| |||   ||||||| ||| |||||||||||||    
T  35190759 tcccatgagcatagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttattcaccttataaggtgaat 35190858  T
Q  187 tctagccactaggctatctaa 207  Q
    |||||||||||| ||| ||||    
T  35190859 tctagccactagactacctaa 35190879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 18631543 - 18631578
Alignment:
Q  162 cacttatccactttataaggtgaattctagccacta 197  Q
    ||||||| ||||||||||||||||||||||||||||    
T  18631543 cacttattcactttataaggtgaattctagccacta 18631578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 5678307 - 5678265
Alignment:
Q  91 cgtgagcataactcgttggtaggataatgcattattatatgca 133  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||    
T  5678307 cgtgagcctaactcattggtaggataatacattattatatgca 5678265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 16251547 - 16251501
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatctaac 208  Q
    ||||||| ||| |||||||||||||||||| |||||||||| |||||    
T  16251547 cacttattcaccttataaggtgaattctagtcactaggctacctaac 16251501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 6530228 - 6530192
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactag 198  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  6530228 cacttattcaccttataaggtgaattctagccactag 6530192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 7563677 - 7563629
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| ||| |||||||||| |||||||||||| |||||    
T  7563677 agtcccgtgagcatagctcagttggtaggacaatgcattattacatgca 7563629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 357
Target Start/End: Complemental strand, 9508862 - 9508830
Alignment:
Q  325 ttcaatctaaataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||||||| ||||    
T  9508862 ttcaatctaaataagtgattttcacatatatct 9508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 18991454 - 18991426
Alignment:
Q  174 ttataaggtgaattctagccactaggcta 202  Q
    |||||||||||||||||||||||||||||    
T  18991454 ttataaggtgaattctagccactaggcta 18991426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 32057028 - 32057076
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||||||||||    
T  32057028 agtcccgtgagcatagctcagttgataggacaatgcattattatatgca 32057076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 35001509 - 35001553
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||| ||||||||||||||| ||| ||||||||||    
T  35001509 ttttctctctattttaatctaaataagtgacttttacatagatct 35001553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 18569545 - 18569424
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| ||   |||||| || ||||  || |||| ||||||||||||||||||    
T  18569545 taggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacaagaaatcacctgtcttcatctttttctctctatttcaatctaaa 18569446  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  18569445 taagtgattttcacatagatct 18569424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 30878924 - 30879042
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||||| || |||||| ||||| ||||||||||| |||| ||||| |||| | ||||||||||||  || |||| ||| ||||| |||||||||||    
T  30878924 gttttctcttacaatttcttcattgaggggtggttttgggtcaatttttgacctgagatcatctctcttcatctttttctctttattttaatctaaataa 30879023  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||||||||    
T  30879024 gtgattttcacatagatct 30879042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 357
Target Start/End: Complemental strand, 51868883 - 51868759
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||| || | || || |||| |||||| | |||||  || |||| |||||||||||||||    
T  51868883 ctttaggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatct 51868784  T
Q  333 aaataagtgattttcacatagatct 357  Q
    |||||||||| ||||||||||||||    
T  51868783 aaataagtgactttcacatagatct 51868759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 20357454 - 20357573
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||  | |||| ||| | | ||||||||  | |||||| ||| |||||||||||    
T  20357454 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaa-cccggacaactaacttattcaccttataaggtga 20357552  T
Q  185 attctagccactaggctatct 205  Q
    |||||| |||||||| |||||    
T  20357553 attctaaccactaggttatct 20357573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 205
Target Start/End: Complemental strand, 20562501 - 20562382
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||  | |||| ||| | | ||||||||  | |||||| ||| |||||||||||    
T  20562501 agtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaa-cccggacaactaacttattcaccttataaggtga 20562403  T
Q  185 attctagccactaggctatct 205  Q
    |||||| |||||||| |||||    
T  20562402 attctaaccactaggttatct 20562382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 35584856 - 35584735
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaa 334  Q
    ||||||||||||| || |||||| ||||| ||||| ||||| |||| || ||||||| |||||| ||| ||||  || |||| ||| |||||||||||||    
T  35584856 taggttttctcttacaatttcttcattgaggggtgattttgggtcaattcttaacctgaaatca-ctcatcttcatctttttctctttatttcaatctaa 35584758  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||    
T  35584757 ataagtgattttcacatagatct 35584735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 50272372 - 50272254
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||||| || |||||| ||||||||||||||||| |||| || || |||| |||||| | || ||  || |||| ||| |||||||||||||||||    
T  50272372 gttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctctttatttcaatctaaataa 50272273  T
Q  339 gtgattttcacatagatct 357  Q
    || ||||||||||||||||    
T  50272272 gtaattttcacatagatct 50272254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 7342568 - 7342689
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| |||| ||||| |||| |||||| | |||||  |  |||||| ||||||||||||||||    
T  7342568 taggttttctcttcccgtttcttcattggggggtggttttgggtcaatttttgacctgaaatcacccctcttcatatttttttatctatttcaatctaaa 7342667  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||| || |||||||    
T  7342668 taagtgacttttacgtagatct 7342689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 44637264 - 44637389
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaaggg-tggttttgagtcatttttaaccttaaatcatctctctttgtcattttt-tctctatttcaatc 331  Q
    |||||| |||||||||| |||||||| ||| | ||| |||||||| |||| |||| || | |||||| |||||||  || ||||| ||| ||||||||||    
T  44637264 ctttagattttctcttctagtttcttcattaagggggtggttttgggtcaattttgacataaaatcacctctcttcatcttttttatctttatttcaatc 44637363  T
Q  332 taaataagtgattttcacatagatct 357  Q
    |||||||||||||||||| |||||||    
T  44637364 taaataagtgattttcacgtagatct 44637389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 51871711 - 51871831
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||  ||||||| ||||  ||||||||||| |||| || || |||| |||||| | |||||  || |||| ||||||||||||||||||    
T  51871711 taggttttctcttctcgtttcttcattgg-gggtggttttgggtcaattcttgacctaaaatcacccctcttcatctttttctctctatttcaatctaaa 51871809  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  51871810 taagtgactttcacatagatct 51871831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 19793526 - 19793637
Alignment:
Q  92 gtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattcta 190  Q
    ||||||||||||| |||||||||| ||||||||||||||||||  | | ||| || | | ||||||||   ||||||| ||| |||||||||||||||||    
T  19793526 gtgagcataactcagttggtaggacaatgcattattatatgcaggggccggaattcgaaccccggacaccccacttattcaccttataaggtgaattcta 19793625  T
Q  191 gccactaggcta 202  Q
     |||||||||||    
T  19793626 accactaggcta 19793637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 42831942 - 42832061
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| | ||||||||||||||||  | |||| |||   | ||||||||   ||||||| ||| ||||||||||||    
T  42831942 gtcccgtgagcatagctcagttggtaggacattgcattattatatgcaggggctggggttcaaaccccggacaccccacttattcaccttataaggtgaa 42832041  T
Q  186 ttctagccactaggctatct 205  Q
    |||||| |||||||||||||    
T  42832042 ttctagtcactaggctatct 42832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 9172337 - 9172455
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||| |||  |||||| ||||  ||||||||||| |||| || || |||| |||||| | |||||  |  ||||||||||||||||||||||||||    
T  9172337 gttttctcatcccatttcttcattggggggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataa 9172436  T
Q  339 gtgattttcacatagatct 357  Q
    |||| ||||||||||||||    
T  9172437 gtgactttcacatagatct 9172455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 9180319 - 9180437
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||| |||  |||||| ||||  ||||||||||| |||| || || |||| |||||| | |||||  |  ||||||||||||||||||||||||||    
T  9180319 gttttctcatcccatttcttcattggggggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttttctctatttcaatctaaataa 9180418  T
Q  339 gtgattttcacatagatct 357  Q
    |||| ||||||||||||||    
T  9180419 gtgactttcacatagatct 9180437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 19723180 - 19723300
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctat-ttcaatctaa 334  Q
    |||||||||||||  |||||||| ||||| ||||||||||| |||| || || || | |||||| |||||||  | ||||||||||| | ||||||||||    
T  19723180 taggttttctcttatagtttcttcattga-gggtggttttgggtcaattattgacttgaaatcacctctcttcat-attttttctctctattcaatctaa 19723277  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||    
T  19723278 ataagtgattttcacatagatct 19723300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 30818577 - 30818459
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||| || ||||||||| ||||| |||| |||||| |||| || || |||| |||||| |  ||||  || |||| |||||||||||||||||||||    
T  30818577 gttttcttttacagtttcttcattgaggggtagttttgggtcaattattgacctgaaatcacccatcttcatctttttctctctatttcaatctaaataa 30818478  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||| ||||    
T  30818477 gtgattttcacataaatct 30818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 39994891 - 39994829
Alignment:
Q  143 gtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||| |||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  39994891 gtttgaatcccggacatcccacttattcaccttataaggtgaattctagccactaggctatct 39994829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 45806041 - 45805923
Alignment:
Q  241 ttttctcttccagtttctttattgaaggg-tggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||||||| ||||||||||||  ||| |||||||| |||| ||||| | || |||||| || ||||  || |||| |||||||||||||||||||||    
T  45806041 ttttctcttcccgtttctttattgggggggtggttttgggtcaatttttgatctgaaatcacctttcttcctctttttctctctatttcaatctaaataa 45805942  T
Q  339 gtgattttcacatagatct 357  Q
    |||| ||||||||| ||||    
T  45805941 gtgactttcacataaatct 45805923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 5324788 - 5324679
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    |||||||||| |||||||| ||||| || || ||||| |||| || || ||||  ||||| |||||||  || |||| ||||||||||||||||||||||    
T  5324788 ttttctcttcaagtttcttcattgagggatgattttgggtcaattcttgacctggaatcacctctcttcatctttttctctctatttcaatctaaataag 5324689  T
Q  340 tgattttcac 349  Q
    ||||||||||    
T  5324688 tgattttcac 5324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 15368819 - 15368916
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||| ||||||||||||||||||  | | || ||| | | ||||||||   ||||||| || ||||||||||||||||||||||||||||||    
T  15368819 gttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcattttataaggtgaattctagccactaggcta 15368916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 4429579 - 4429463
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattc 188  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||  |  ||| ||| | | || | ||||| ||||||| ||  |||||||||||||||    
T  4429579 ccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccctgaacattccacttattcatcttataaggtgaattc 4429480  T
Q  189 tagccactaggctatct 205  Q
    |||||||||| ||||||    
T  4429479 tagccactagactatct 4429463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 15774412 - 15774296
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |  |   || ||| | | ||||||||   ||||||| ||| ||||||||||||    
T  15774412 gtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaa 15774313  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||| ||||    
T  15774312 ttctagccactaagcta 15774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 18309567 - 18309659
Alignment:
Q  110 taggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||| ||||||||||||||||||  |  ||||||| | |||||||||||   |||||| |||||||| ||||||||||||||| ||||||||    
T  18309567 taggacaatgcattattatatgcaggggttggagttagaatcccggacatcctacttattcactttatgaggtgaattctagccgctaggcta 18309659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 28035062 - 28035106
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  28035062 ttttctctctatttcaatctaaataagtgattttcacatagatct 28035106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 34519056 - 34519100
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  34519056 ttttctctctatttcaatctaaataagtgattttcacatagatct 34519100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 38520769 - 38520647
Alignment:
Q  237 taggttttctcttccagtttctttattgaaggg-tggttttgagtca-tttttaaccttaaatcatctc-tctttgtcattttttctctatttcaatcta 333  Q
    ||||||||||||| ||||||||| ||| | ||| ||||||||  ||| ||||| |||| |||||| ||| ||||  || |||| |||||||||| |||||    
T  38520769 taggttttctctttcagtttcttcattaagggggtggttttggatcaattttttacctgaaatca-ctcatcttcatctttttctctctatttcgatcta 38520671  T
Q  334 aataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||    
T  38520670 aataagtgattttcacatagatct 38520647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 50166333 - 50166215
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| |||| || || |||| ||||   | |||||| || |||| | ||||||||||||||||    
T  50166333 taggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattattgacctgaaattgcccctctttatctttttctatctatttcaatctaaa 50166235  T
Q  336 taagtgattttcacatagat 355  Q
    ||||||| ||||||||||||    
T  50166234 taagtgaatttcacatagat 50166215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 5701106 - 5701224
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||||| || |||||||||||| |||||  |||| |||| |  || |||| |||||| | |||||  || |||| ||| ||||||||| |||||||    
T  5701106 gttttctcttacaatttctttattgaggggtgactttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttatttcaatttaaataa 5701205  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||||||||    
T  5701206 gtgattttcacatagatct 5701224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 355
Target Start/End: Complemental strand, 19716134 - 19716013
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    ||||||||||| |||| || |||||| |||||  |||||||||| |||| || || | || |||||| | |||||  || |||| ||| |||||||||||    
T  19716134 ctttaggttttttcttacaatttcttcattgagaggtggttttgggtcaattcttgatctgaaatcacc-ctcttcatctttttctctttatttcaatct 19716036  T
Q  333 aaataagtgattttcacatagat 355  Q
    |||||||||||||||||||||||    
T  19716035 aaataagtgattttcacatagat 19716013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 357
Target Start/End: Complemental strand, 25406516 - 25406398
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||| |||||| ||||||| ||||  ||||| ||||| |||| || || |||| ||||||   |||||  || |||| |||||||||||||||||||||    
T  25406516 gttttttcttcccgtttcttcattggggggtgattttgggtcaattcttgacctgaaatcacacctcttcatctttttctctctatttcaatctaaataa 25406417  T
Q  339 gtgattttcacatagatct 357  Q
    |||| ||||||||||||||    
T  25406416 gtgactttcacatagatct 25406398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 357
Target Start/End: Complemental strand, 25728187 - 25728073
Alignment:
Q  244 tctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtga 342  Q
    |||||| || |||||| | ||| ||||||||||| |||| || || |||| ||||||   |||||  || |||| ||| |||||||||||||||||||||    
T  25728187 tctcttacaatttcttcaatgacgggtggttttgggtcaattcttgacctgaaatcactcctcttcatctttttctctttatttcaatctaaataagtga 25728088  T
Q  343 ttttcacatagatct 357  Q
    |||||||||||||||    
T  25728087 ttttcacatagatct 25728073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 27872668 - 27872706
Alignment:
Q  319 ctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27872668 ctctatttcaatctaaataagtgattttcacatagatct 27872706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 38020049 - 38019931
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttg-catcccggacatttcacttatccactttataaggtg 183  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||  | | |||||| |  | ||| ||||   ||||||| ||| |||||| |||    
T  38020049 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaaccccagacaccccacttattcaccttataaagtg 38019950  T
Q  184 aattctagccactaggcta 202  Q
    |||||||||||||||||||    
T  38019949 aattctagccactaggcta 38019931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 40646534 - 40646655
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaa 334  Q
    ||||||||||||| || |||||| ||||| ||||||||||| |||| || || |||| |||||| ||| ||||  || |||| | | |||||||||||||    
T  40646534 taggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctaaaatca-ctcatcttcatctttttctatttatttcaatctaa 40646632  T
Q  335 ataagtgattttcacatagatct 357  Q
    ||||||||||||||| |||||||    
T  40646633 ataagtgattttcacgtagatct 40646655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 40881248 - 40881127
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaa 334  Q
    ||||||||||||| | ||||||| ||||| || |||||||| |||| || || |||| |||||| ||| ||||  || |||| |||||||||||||||||    
T  40881248 taggttttctcttaccgtttcttcattgagggatggttttgggtcaattcttgacctaaaatca-ctcatcttcatctttttctctctatttcaatctaa 40881150  T
Q  335 ataagtgattttcacatagatct 357  Q
    || |||||||||||| |||||||    
T  40881149 atgagtgattttcacttagatct 40881127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 45426298 - 45426176
Alignment:
Q  237 taggttttctcttccagtttctttattgaaggg-tggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaa 334  Q
    |||||||||| |||||||||||| ||||| ||| |||||||| |||| || || |  | |||||| || | ||  || |||| ||||||||| |||||||    
T  45426298 taggttttcttttccagtttcttcattgagggggtggttttgggtcaattcttgatttgaaatcacctattttcatctttttctctctatttaaatctaa 45426199  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||    
T  45426198 ataagtgattttcacatagatct 45426176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 50148222 - 50148339
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattttta-accttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    |||||||||  | |||||| ||||| ||||||||||| |||| || || | || ||||||||  ||||  || |||| ||| ||||| ||||||||||||    
T  50148222 ttttctcttataatttcttcattgaggggtggttttgggtcaattctagatctgaaatcatccatcttcatccttttctctttattttaatctaaataag 50148321  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||||||||    
T  50148322 tgattttcacatagatct 50148339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 9919312 - 9919356
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  9919312 ttttctctctatttcaatctaaataagtgatttttacatagatct 9919356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 11453781 - 11453903
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctc--tatttcaatcta 333  Q
    ||||||||||||| ||||||||| ||||| || ||||||   |||| ||||| || | |||||| |||||||  || |||| ||||  ||||||||||||    
T  11453781 taggttttctctttcagtttcttcattgagggatggtttctggtcaatttttgacttgaaatca-ctctcttcatctttttctctctctatttcaatcta 11453879  T
Q  334 aataagtgattttcacatagatct 357  Q
    |||||||| |||||||||||||||    
T  11453880 aataagtggttttcacatagatct 11453903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 12073177 - 12073133
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatat 130  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  12073177 gtcccgtgagcataactcagttggtaggataatgcattattatat 12073133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 14545443 - 14545487
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  14545443 ttttctctatatttcaatctaaataagtgattttcacatagatct 14545487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 20266225 - 20266269
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  20266225 ttttctctttatttcaatctaaataagtgattttcacatagatct 20266269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 37490885 - 37491001
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||  | | || ||  | | | ||||||   | ||||| ||  ||||||||||||    
T  37490885 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggtacgaaccacggacaccccgcttattcatcttataaggtgaa 37490984  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  37490985 ttctagccactaggcta 37491001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 46116274 - 46116158
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||  |||||||||| |||||||||| |||||||  | |||| ||| | | ||||||||   || |||| ||| ||||||||||||    
T  46116274 gtcccgtgagcatagcttagttggtaggacaatgcattatcatatgcaggggctggggttcgaaccccggacaccccaattattcaccttataaggtgaa 46116175  T
Q  186 ttctagccactaggcta 202  Q
    ||||| |||||||||||    
T  46116174 ttctaaccactaggcta 46116158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 3871337 - 3871376
Alignment:
Q  318 tctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  3871337 tctcaatttcaatctaaataagtgattttcacatagatct 3871376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 48110525 - 48110640
Alignment:
Q  88 tcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    |||||||||| || ||| |||||||| | ||||||||||||||||||  |  ||||||| | | | ||||||  |||||||| ||  ||||||||||||     
T  48110525 tcccgtgagcgtagctcagttggtagaacaatgcattattatatgcaggggttggagttcgaacctcggacacctcacttattcatcttataaggtgaaa 48110624  T
Q  187 tctagccactaggcta 202  Q
    ||||||||||||||||    
T  48110625 tctagccactaggcta 48110640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 7312322 - 7312212
Alignment:
Q  248 ttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgatttt 346  Q
    |||||||||||| ||||| |||| |||||| |||| ||||| |||| |||| |  ||||||  || |||| ||||||||||||  ||||||| |||||||    
T  7312322 ttccagtttcttcattgaggggtagttttgggtcaatttttgacctaaaattacttctcttcatctttttctctctatttcaaattaaataaatgatttt 7312223  T
Q  347 cacatagatct 357  Q
    ||| |||||||    
T  7312222 cacgtagatct 7312212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 33059573 - 33059480
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactagg 199  Q
    ||||||||||||||||||||||||||||| | || | |||| | ||||||||||  | |||||| ||| ||||||| |||||| |||||| ||||    
T  33059573 gttggtaggataatgcattattatatgcaga-accgaagttcgaatcccggacaccttacttattcaccttataagatgaattatagccattagg 33059480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 37733769 - 37733866
Alignment:
Q  105 gttggtaggataatgcattattatatgca-tagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||| |||||||||||||||||| | ||| || ||| | | ||||||||   ||||||| ||| ||||||||||||||||| |||||||||||    
T  37733769 gttggtaggacaatgcattattatatgcagtggacggg-gttcgaaccccggacaccccacttattcaccttataaggtgaattctaaccactaggcta 37733866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 7997710 - 7997754
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||    
T  7997710 ttttctctttatttcaatataaataagtgattttcacatagatct 7997754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 8261772 - 8261728
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  8261772 ccgtgagcatagctcagttggtaggataatgcattattatatgca 8261728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 8364504 - 8364392
Alignment:
Q  91 cgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattct 189  Q
    |||||||||||||| |||||||||| |||||||||||||||| || |   |||||| | | |||| ||    ||||||| ||| || |||||||||||||    
T  8364504 cgtgagcataactcagttggtaggaaaatgcattattatatgtatgggtcggagttcgaaccccgaacgccccacttattcaccttttaaggtgaattct 8364405  T
Q  190 agccactaggcta 202  Q
    || ||||||||||    
T  8364404 agtcactaggcta 8364392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 12866118 - 12866165
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgca 133  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  12866118 gtcctgtgagcatagctcgattggtaggataatgcattattatatgca 12866165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 18923985 - 18923938
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  18923985 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgca 18923938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 32711168 - 32711125
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||    
T  32711168 cacttattcaccttataaggtgaattctagccactagactatct 32711125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 201
Target Start/End: Original strand, 39433429 - 39433468
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggct 201  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  39433429 cacttattcaccttataaggtgaattctagccactaggct 39433468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 49251495 - 49251448
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  49251495 gtcctgtgagcataactcagttggtaggacaatgcattattatatgca 49251448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 21884569 - 21884682
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||  | | |  ||| | | ||| ||||   ||||||| ||| |||||||||||    
T  21884569 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtga 21884668  T
Q  185 attctagccactag 198  Q
    |||||| |||||||    
T  21884669 attctaaccactag 21884682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 23345081 - 23345040
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctat 203  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||    
T  23345081 cacttattcaccttataaggtgaattctagccactagactat 23345040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 33291569 - 33291532
Alignment:
Q  320 tctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  33291569 tctatttcaatataaataagtgattttcacataaatct 33291532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 3532998 - 3532958
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||||||||||||||| |||||||||    
T  3532998 cacttattcaccttataaggtgaattctagctactaggcta 3532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 5600698 - 5600742
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||||| ||||||||||| ||||||||||||||| | ||||||||    
T  5600698 ttttttgtctatttcaatttaaataagtgatttttagatagatct 5600742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 11405527 - 11405567
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  11405527 cacttattcaccttataaggtgaattctagccactaagcta 11405567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 24661976 - 24662024
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||    
T  24661976 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgca 24662024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 357
Target Start/End: Original strand, 31836745 - 31836773
Alignment:
Q  329 atctaaataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||||||||    
T  31836745 atctaaataagtgattttcacatagatct 31836773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 34413275 - 34413247
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  34413275 tttcaatctaaataagtgattttcacata 34413247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 35593834 - 35593874
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||| ||||||||    
T  35593834 cacttattcaccttataaggtgaattctagccgctaggcta 35593874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 48750096 - 48750124
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  48750096 tttcaatctaaataagtgattttcacata 48750124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 49010800 - 49010752
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcat 134  Q
    |||||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  49010800 gtcccgtgagcatagctcagttggtaggacaatgtattattatatgcat 49010752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 50755415 - 50755455
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||| ||||||||||||||||||||||    
T  50755415 cacttattcaccttataaagtgaattctagccactaggcta 50755455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 5e-26; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 21266231 - 21266355
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||| |||| || || || | |||||| |||||||  || |||| ||| |||||||||||    
T  21266231 ctttaagttttttcttccagtttctttattgaggggtggttttgggtcaattattgacatgaaatcacctctcttcatctttttctctttatttcaatct 21266330  T
Q  333 aaataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||||    
T  21266331 aaataagtgattttcacatagatct 21266355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 42311122 - 42311243
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||||||  |||||||| | ||| ||||||||||| |||| || || |||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  42311122 taggttttctcttagagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcatcattttctctctatttcaatctaaa 42311221  T
Q  336 taagtgattttcacatagatct 357  Q
    |||||||| |||||||||||||    
T  42311222 taagtgatattcacatagatct 42311243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 2843462 - 2843341
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||||||||||||||| |||| || || |||| ||| || | |||||  || |||| ||| ||||||||||||||    
T  2843462 taggttttctcttacaatttcttcattgaagggtggttttgggtcaattcttgacctgaaaacacccctcttcatctttttctctttatttcaatctaaa 2843363  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  2843362 taagtgattttcacatagatct 2843341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 32684527 - 32684648
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| | ||||||| ||||| ||||||||||| |||| || || |||| ||||||  | ||||  || |||| ||||||||||||||||||    
T  32684527 taggttttctcttacggtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacatgtcttcatcgttttctctctatttcaatctaaa 32684626  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  32684627 taagtgattttcacatagatct 32684648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 357
Target Start/End: Complemental strand, 35496413 - 35496289
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    |||||||||||||||| | ||||||| ||||| ||||||||||| |||| || || |||| |||||| |  ||||  || |||| |||||||||||||||    
T  35496413 ctttaggttttctcttactgtttcttcattgaggggtggttttgggtcaattcttgacctaaaatcaccaatcttcatctttttctctctatttcaatct 35496314  T
Q  333 aaataagtgattttcacatagatct 357  Q
    || ||||||||||||||||||||||    
T  35496313 aattaagtgattttcacatagatct 35496289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 208
Target Start/End: Original strand, 25818281 - 25818403
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||| | | |||| ||| | ||||||| |||  |||||||||||    
T  25818281 gtcccgtgagcataactcagttggtaggataatgcattattatatgcaggggctggagttcgaaccccgaacactccacttattcaccatataaggtgaa 25818380  T
Q  186 ttctagccactaggctatctaac 208  Q
    || |||| |||| |||| |||||    
T  25818381 ttatagcaactaagctacctaac 25818403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 48207743 - 48207865
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcatttttaaccttaaatcatctctctttgtcattttttctctatttcaatcta 333  Q
    ||||||||||||||||| || || || || || ||||||||||| |||||| || |||| |||||| | |||||  || |||| ||  ||||||||||||    
T  48207743 ctttaggttttctcttctagatttttcatcga-gggtggttttgggtcattcttgacctgaaatcacccctcttcatctttttctcaatatttcaatcta 48207841  T
Q  334 aataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||    
T  48207842 aataagtgattttcacatagatct 48207865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 433925 - 433806
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||  ||||||| ||||  ||||||||||| |||| ||||| |||| |||||||| || ||  || |||| ||||||||||||||||||    
T  433925 taggttttctcttctggtttcttcattg--gggtggttttgggtcaatttttgacctgaaatcatcccttttcatctttttctctctatttcaatctaaa 433828  T
Q  336 taagtgattttcacatagatct 357  Q
    ||| ||| ||||||||||||||    
T  433827 taaatgactttcacatagatct 433806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 20116428 - 20116546
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||||||| |||||||| | ||| |||| |||||| |||| ||||| |||| |||||| |  ||||  || |||| | |||||||||||||||||||    
T  20116428 gttttctcttcaagtttcttcaatgaggggtagttttgggtcaatttttgacctgaaatcacccttcttcatctttttctatctatttcaatctaaataa 20116527  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||||||||    
T  20116528 gtgattttcacatagatct 20116546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 1485491 - 1485370
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| || | || || |||| |||||| |  ||||  || |||| ||||||||||||||||||    
T  1485491 taggttttctcttcccgtttcttcattggggggtggttttgggttaattcttgacctaaaatcacccgtcttcatctttttctctctatttcaatctaaa 1485392  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  1485391 taagtgactttcacatagatct 1485370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 26492211 - 26492328
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    |||| |||| ||||||||| ||||| ||||||||||| |||| || || |||| |||| | | |||||  || |||| ||||||||||||| ||||||||    
T  26492211 ttttgtcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaataacccctcttcatctttttctctctatttcaatttaaataag 26492310  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||||||||    
T  26492311 tgattttcacatagatct 26492328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 26583556 - 26583677
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||| ||||||||| ||||| ||||||||||  |||| || || |||| |||||| | |||||  || |||| ||||||||||||||||||    
T  26583556 taggttttttcttacagtttcttcattgaggggtggtttttggtcaattcttgacctgaaatcacccctcttcatctttttatctctatttcaatctaaa 26583655  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||| ||| ||||    
T  26583656 taagtgattttcatatatatct 26583677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 46821856 - 46821977
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||||||  | ||| || ||||| ||||||||||| |||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  46821856 taggttttctcttataattttttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaa 46821955  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  46821956 taagtgattttcacatagatct 46821977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 46338898 - 46339016
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||||| || |||||| ||||| |||| |||||| |||| || || |||| |||| ||| |||||  || |||| ||| ||||||||| |||||||    
T  46338898 gttttctcttacaatttcttcattgaggggtagttttgggtcaattcttgacctgaaattatccctcttcatctttttctctttatttcaatgtaaataa 46338997  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||||||||    
T  46338998 gtgattttcacatagatct 46339016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 1449064 - 1448943
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||||||| |||||| |||| ||||||||||| |||| || || |||| |||| | |   |||  ||  ||| ||||||||||||||||||    
T  1449064 taggttttttcttccagattctttgttgaggggtggttttgggtcaattcttgacctgaaataaccaaacttcatctctttctctctatttcaatctaaa 1448965  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  1448964 taagtgattttcacatagatct 1448943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 22928105 - 22927984
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| |||   ||||||||||| |||| || || |||| |||||| | || ||  || |||| ||||||||||||||||||    
T  22928105 taggttttctcttcccgtttcttcattagggggtggttttgggtcaattcttgacctgaaatcaccccttttcatctttttctctctatttcaatctaaa 22928006  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||| ||||||    
T  22928005 taagtgactttcacacagatct 22927984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 355
Target Start/End: Complemental strand, 42067297 - 42067176
Alignment:
Q  235 tttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatcta 333  Q
    |||| ||||||||||| || || |  ||||||||||| ||||| |||| || || |||| |||||| |||||||  || | || ||| ||||||||||||    
T  42067297 tttaagttttctcttctagattttccattgaagggtgattttgggtcaattcttgacctgaaatcacctctcttcatcttgttatctatatttcaatcta 42067198  T
Q  334 aataagtgattttcacatagat 355  Q
    ||||||||||||||||||||||    
T  42067197 aataagtgattttcacatagat 42067176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 45198199 - 45198090
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  || ||   || | | ||||||||   || |||| ||| |||||||||||    
T  45198199 agtcccgtgagcataactcagttggtaggataatgcattattatatgcagtgattgagattcgaaccccggacaccccatttattcaccttataaggtga 45198100  T
Q  185 attctagcca 194  Q
    ||||||||||    
T  45198099 attctagcca 45198090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 355
Target Start/End: Original strand, 6001859 - 6001983
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaa-gggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatc 331  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||  || |||||| |||| |||||| |  ||||  || |||| || |||||| ||||    
T  6001859 ctttaggttttctcttccattttctttattgaaggggtgattttggatcaatttttgacctgaaatcacccatcttcatctttttctccctattttaatc 6001958  T
Q  332 taaataagtga-ttttcacatagat 355  Q
    ||||||||||| |||||||||||||    
T  6001959 taaataagtgatttttcacatagat 6001983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 34948101 - 34948217
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| |||||||||| |||||||  | | |  ||| | | ||||||||   ||||||| ||| ||||||||||||    
T  34948101 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttattcaccttataaggtgaa 34948200  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  34948201 ttctagccactaggcta 34948217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 35667389 - 35667345
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  35667389 ttttctctctatttcaatctaaataagtgattttcacatagatct 35667345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 21925470 - 21925589
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| |||  ||||||||| ||||||||||||||| |||||   || ||||| |   |||| ||  ||||||| ||| ||||||| ||||    
T  21925470 gtcccgtgagcatagctcaattggtaggacaatgcattattatatacataggtcggggtttgaacttcggatatcccacttattcaccttataagatgaa 21925569  T
Q  186 ttctagccactaggctatct 205  Q
    ||||||||||||||||||||    
T  21925570 ttctagccactaggctatct 21925589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 352
Target Start/End: Complemental strand, 14628112 - 14627998
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcat-ttttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaaata 337  Q
    ||||| |||| |||| |||| ||||||||||||||||| ||||  |||| |||  |||| | ||| ||||  || ||||||||||| |||||||||||||    
T  14628112 gttttttcttacagtgtcttcattgaagggtggttttgggtcaaatttttaccggaaattacctcctcttcatctttttttctctaattcaatctaaata 14628013  T
Q  338 agtgattttcacata 352  Q
    |||||||||||||||    
T  14628012 agtgattttcacata 14627998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 3860840 - 3860916
Alignment:
Q  282 atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacatagatctt 358  Q
    ||||||||| | ||||||  ||||||| || |||| ||| | ||||||| |||||||||||||||||||||||||||    
T  3860840 atttttaacttgaaatcacatctctttatctttttctctttgtttcaatataaataagtgattttcacatagatctt 3860916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 29778976 - 29779092
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||  |   |||||| | |  ||| | | ||||||||| ||| ||||||||||||    
T  29778976 gtcccgtgagcatagctcaattggtaggataatgcattattatatgcaggggtcggagttcgaactccgaatacttcacttattcaccttataaggtgaa 29779075  T
Q  186 ttctagccactaggcta 202  Q
     ||||||| ||||||||    
T  29779076 ctctagccgctaggcta 29779092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 30644164 - 30644276
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||| ||| ||| |||||||||| ||||||||||||||||||  | | || ||| | | ||| ||||   ||||||| ||| ||||||||||||    
T  30644164 gtcccgtgagtatagctcagttggtaggacaatgcattattatatgcaggggccggtgttcgaaccccagacaccccacttattcaccttataaggtgaa 30644263  T
Q  186 ttctagccactag 198  Q
    |||||||||||||    
T  30644264 ttctagccactag 30644276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 5546278 - 5546317
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacata 352  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  5546278 ttttctctctatttcaatctaaataagtgattttcacata 5546317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 22741197 - 22741312
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatatgca-tagac-tggagtttgcatcccggacatttcacttatccactttataaggt 182  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||| ||| |  || ||| | ||| ||||||   ||||||| ||  |||||||||    
T  22741197 agtcccgtgagcatagctcggttggtaggacaatgcattattatatgcagtagtcagggggttcgaatctcggacaccccacttattcatcttataaggt 22741296  T
Q  183 gaattctagccactag 198  Q
    ||||||||||||||||    
T  22741297 gaattctagccactag 22741312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 23425576 - 23425485
Alignment:
Q  267 gggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||| |||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||||||||||||| ||||||||||    
T  23425576 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatatttcaatctaaataagtgatttttacatagatct 23425485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 31236024 - 31235905
Alignment:
Q  241 ttttctcttccagtttctttattgaagg-gtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||||||| |||||| ||||| || ||| ||||| |||| ||||| || | |||||  | |||||  || |||| |||||||||||||||||||||    
T  31236024 ttttctcttccattttcttcattgagggagtgattttgggtcaatttttgacatgaaatctcccctcttcatctttttctctctatttcaatctaaataa 31235925  T
Q  339 gtga-ttttcacatagatct 357  Q
    |||| |||||||||||||||    
T  31235924 gtgatttttcacatagatct 31235905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 36316074 - 36316027
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36316074 gtcccgtgagcatagctcagttggtaggataatgcattattatatgca 36316027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 2261581 - 2261468
Alignment:
Q  90 ccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattc 188  Q
    ||||||||||| |||  ||||||||| ||||||||||||||||||  | | || ||| | ||||||||||    |||||| ||| |||||||||||||||    
T  2261581 ccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaatcccggacacccaacttattcaccttataaggtgaattc 2261482  T
Q  189 tagccactaggcta 202  Q
    ||| ||||| ||||    
T  2261481 tagacactatgcta 2261468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 32387225 - 32387180
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatg 131  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  32387225 gtcccgtgagcataactcagttggtaggataatacattattatatg 32387180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 32522079 - 32522042
Alignment:
Q  318 tctctatttcaatctaaataagtgattttcacatagat 355  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32522079 tctctatttcaatttaaataagtgattttcacatagat 32522042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 5787476 - 5787572
Alignment:
Q  106 ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||||| ||||||||||||||||||  | | || ||||| | |||  |||   ||||||| ||| |||||||||||||||||| ||||||||||    
T  5787476 ttggtaggacaatgcattattatatgcaggggccggggtttgaaccccaaacaccccacttattcaccttataaggtgaattctagtcactaggcta 5787572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 21285377 - 21285337
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  21285377 cacttattcaccttataaggtgaattctagccactaggcta 21285337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 29658296 - 29658256
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  29658296 cacttattcaccttataaggtgaattctagccactaggcta 29658256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 38792226 - 38792322
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggct 201  Q
    ||||||| || ||||||||||||||||||  |    ||||||| | ||||||||    |||||| ||| ||||||||||||||||||||||||||||    
T  38792226 gttggtaagacaatgcattattatatgcaggggtcagagtttgaaccccggacaccctacttattcaccttataaggtgaattctagccactaggct 38792322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 30741559 - 30741606
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||    
T  30741559 gtcccgtgagcataactcagttggtaggataatgtattgttatatgca 30741606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 38778779 - 38778732
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  38778779 gtcccgtgagcatatctcagttggtaggacaatgcattattatatgca 38778732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 43970953 - 43970906
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||    
T  43970953 gtcccgtgagcataactcagttggtagaacaatgcattattatatgca 43970906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 355
Target Start/End: Complemental strand, 7640928 - 7640898
Alignment:
Q  325 ttcaatctaaataagtgattttcacatagat 355  Q
    |||||||||||||||||||||||||||||||    
T  7640928 ttcaatctaaataagtgattttcacatagat 7640898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 14967735 - 14967689
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatg 131  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  14967735 agtcctgtgagcataactcagttggtaggacaatgcattattatatg 14967689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 15397211 - 15397165
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatg 131  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  15397211 agtcctgtgagcataactcagttggtaggacaatgcattattatatg 15397165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 203
Target Start/End: Complemental strand, 25711231 - 25711113
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttat-aaggtga 184  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||| |  | | || ||| | | | ||||||   ||||||| |||||||| || ||||    
T  25711231 gtcccgtgagtataactcagttgataggataatgcattattatatgtaggggccggggttcgaacctcggacaccccacttattcactttataaatgtga 25711132  T
Q  185 attctagccactaggctat 203  Q
    |||||| ||||||||||||    
T  25711131 attctatccactaggctat 25711113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 38451888 - 38451970
Alignment:
Q  116 aatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactag 198  Q
    |||||||| |||||||||  | | || ||| | ||||||||||   ||||||| ||| |||||||||||||||||||||||||    
T  38451888 aatgcattgttatatgcaggggccggggttcgaatcccggacaccccacttattcacattataaggtgaattctagccactag 38451970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 43902560 - 43902514
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatctaac 208  Q
    ||||||| ||| |||||||||||||||||||||||| |||| |||||    
T  43902560 cacttattcaccttataaggtgaattctagccactatgctacctaac 43902514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 14102487 - 14102572
Alignment:
Q  117 atgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||||||||||  | | || ||||| | ||||||||   ||||||| ||| ||||||||||||||||| | |||||||||    
T  14102487 atgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcaccttataaggtgaattctaactactaggcta 14102572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 14412504 - 14412589
Alignment:
Q  117 atgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||||||||||  | | || ||||| | ||||||||   ||||||| ||| ||||||||||||||||| | |||||||||    
T  14412504 atgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcaccttataaggtgaattctaactactaggcta 14412589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 17900960 - 17900863
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||| ||||||||||||||||||  | | || | | | | |||||||    ||||||| | | |||||||||||||||||||||||||||||    
T  17900960 gttggtaggacaatgcattattatatgcaggggccggggctcgaaccccggactccccacttattctccttataaggtgaattctagccactaggcta 17900863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 22966059 - 22965946
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||  | | |  ||| | | ||| ||||   ||||||| ||| |||||||||||    
T  22966059 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtga 22965960  T
Q  185 attctagccactag 198  Q
    |||||| |||||||    
T  22965959 attctaaccactag 22965946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 23085447 - 23085484
Alignment:
Q  320 tctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||| ||| ||||||||||||||    
T  23085447 tctatttcaatctaaataattgactttcacatagatct 23085484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 38025403 - 38025452
Alignment:
Q  153 cggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||| ||||||| ||  ||||||||||||| |||||||||||||||    
T  38025403 cggacattccacttattcatcttataaggtgaatcctagccactaggcta 38025452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 49012393 - 49012438
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatg 131  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  49012393 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 49012438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 1097761 - 1097717
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||||| ||||||||||| |||||||||| |||| ||||||||||    
T  1097761 ttttttatctatttcaatttaaataagtgttttttacatagatct 1097717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 1749328 - 1749300
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  1749328 tttcaatctaaataagtgattttcacata 1749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 2366428 - 2366468
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  2366428 cacttattcaccttataaggtgaattctagccattaggcta 2366468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 130
Target Start/End: Original strand, 8195910 - 8195954
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatat 130  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||    
T  8195910 gtcccgtgagcatagctcagttggtaggacaatgcattattatat 8195954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 22742844 - 22742872
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  22742844 tttcaatctaaataagtgattttcacata 22742872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 24351028 - 24351000
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  24351028 tttcaatctaaataagtgattttcacata 24351000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 28476127 - 28476155
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  28476127 tttcaatctaaataagtgattttcacata 28476155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 30604441 - 30604401
Alignment:
Q  165 ttatccactttataaggtgaattctagccactaggctatct 205  Q
    |||| ||| ||||||||||||||||||||||||| ||||||    
T  30604441 ttattcaccttataaggtgaattctagccactagactatct 30604401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 33202566 - 33202538
Alignment:
Q  174 ttataaggtgaattctagccactaggcta 202  Q
    |||||||||||||||||||||||||||||    
T  33202566 ttataaggtgaattctagccactaggcta 33202538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 35368470 - 35368510
Alignment:
Q  165 ttatccactttataaggtgaattctagccactaggctatct 205  Q
    |||| ||| ||||||||||||||||||||||| ||||||||    
T  35368470 ttattcaccttataaggtgaattctagccactgggctatct 35368510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 36143785 - 36143829
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| |||||| ||||||||||||||||| ||||||| |||||||    
T  36143785 ttttctctctaattcaatctaaataagtgtttttcacgtagatct 36143829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 41832981 - 41832953
Alignment:
Q  169 ccactttataaggtgaattctagccacta 197  Q
    |||||||||||||||||||||||||||||    
T  41832981 ccactttataaggtgaattctagccacta 41832953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 47403612 - 47403572
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  47403612 cacttattcaccttataaggtgaattctagccactaagcta 47403572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 48930686 - 48930714
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  48930686 tttcaatctaaataagtgattttcacata 48930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 235 - 358
Target Start/End: Original strand, 3725025 - 3725149
Alignment:
Q  235 tttaggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatcta 333  Q
    |||| |||||||||| || |||||||||||| ||||||||||| |||| ||||| |||| |||||||  |||||  || |||| ||||||||||||| ||    
T  3725025 tttaagttttctcttacaatttctttattgaggggtggttttgggtcaatttttgacctaaaatcattcctcttcatctttttctctctatttcaatata 3725124  T
Q  334 aataagtgattttcacatagatctt 358  Q
    |||||||||||||||||||||||||    
T  3725125 aataagtgattttcacatagatctt 3725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 234 - 357
Target Start/End: Complemental strand, 40626265 - 40626141
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    ||||||||||||||||||| |||||| ||||| ||||| ||||| ||| ||| || |||| |||||| | ||||| ||| |||| |||||||||||||||    
T  40626265 ctttaggttttctcttccattttcttaattgaggggtgattttgggtctattcttgacctgaaatcacccctcttcgtctttttctctctatttcaatct 40626166  T
Q  333 aaataagtgattttcacatagatct 357  Q
    ||||||| |||||||||||||||||    
T  40626165 aaataagggattttcacatagatct 40626141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 355
Target Start/End: Complemental strand, 459510 - 459390
Alignment:
Q  236 ttaggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaa 334  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||| |||||| |||| |||||| | |||||  || |||| ||||||||||| | |||    
T  459510 ttaggttttctcttccagtttcttcattgaggggtggttttgggtcaatttttgacctgaaatcacccctcttcatccttttctctctatttcattttaa 459411  T
Q  335 ataagtgattttcacatagat 355  Q
    ||||| |||||||||||||||    
T  459410 ataagcgattttcacatagat 459390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 22538533 - 22538650
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    |||||||||||| |||||| |||||||||| ||||||||||||||||||  |  ||| ||| | |||||| |||  |||||||| ||| |||||||||||    
T  22538533 agtcccgtgagcctaactcagttggtaggacaatgcattattatatgcaggggttggggttcgaatcccgaacacctcacttattcaccttataaggtga 22538632  T
Q  185 attctagccactaggcta 202  Q
    ||||||||||||||||||    
T  22538633 attctagccactaggcta 22538650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 27249386 - 27249265
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||||||||||||||| |||| |  || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  27249386 taggttttctcttacaatttcttcattgaagggtggttttgggtcaatacttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaa 27249287  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  27249286 taagtgattttcacatagatct 27249265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 357
Target Start/End: Complemental strand, 8971866 - 8971740
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctct--atttcaat 330  Q
    ||||||||||| |||| ||||||||| ||||| ||||||||||| |||| || || |||| |||||||| |||||  || |||| |||||  |||| |||    
T  8971866 ctttaggttttttcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcatctttttctctctttattttaat 8971767  T
Q  331 ctaaataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||||||    
T  8971766 ctaaataagtgattttcacatagatct 8971740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 6173478 - 6173599
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||| || | ||||||| ||||| ||||||||||  ||| ||| || |||| |||||| | |||||  || |||| ||||||||||||||||||    
T  6173478 taggttttcttttacggtttcttcattgaggggtggttttcggtctattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaa 6173577  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  6173578 taagtgattttcacatagatct 6173599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 21570643 - 21570522
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||||| || || |||||  |||||||||| |||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  21570643 taggttttctcttccagatttttcattgagtggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctatatttcaatctaaa 21570544  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  21570543 taagtgattttcacatagatct 21570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 9986582 - 9986459
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcatttttt--ctctatttcaatcta 333  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| |||| || || |||| |||||||| |||||     ||||||  ||||| |||||||||    
T  9986582 taggttttctcttacagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcatccctcttcaattttttttatctctaattcaatcta 9986483  T
Q  334 aataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||    
T  9986482 aataagtgattttcacatagatct 9986459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 17154644 - 17154760
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||  | | || ||| | | ||||||||   ||||||| ||| |||||||||||     
T  17154644 gtcccgtgagcataactcggttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgag 17154743  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  17154744 ttctagccactaggcta 17154760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 33001653 - 33001537
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||||  | | || ||||| ||||||||||   ||||||| ||  ||||||||||||    
T  33001653 gtcccgtgagcataactcagttggtaggacaatgcgttattatatgcaagggccggggtttgaatcccggacaccccacttattcatcttataaggtgaa 33001554  T
Q  186 ttctagccactaggcta 202  Q
    ||||||| |||||||||    
T  33001553 ttctagctactaggcta 33001537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 34598833 - 34598955
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaa 334  Q
    ||||||||||||| | |||||||  |||| |||||||||||  ||| || || |||| |||||| ||| ||||  || |||| |||||||||||||||||    
T  34598833 taggttttctcttaccgtttcttcgttgaggggtggttttggatcaattcttgacctcaaatcaactcatcttcatctttttctctctatttcaatctaa 34598932  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||    
T  34598933 ataagtgattttcacatagatct 34598955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 2808705 - 2808584
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||| || |||||| ||||| ||||||||||| |||| || || |||| |||||| | |||||  ||  ||| ||||||||||| ||||||    
T  2808705 taggttttttctttcattttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctatttctctctatttcagtctaaa 2808606  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  2808605 taagtgattttcacatagatct 2808584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 30420523 - 30420644
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| | || || |||||| ||||| |||||||||||  ||| ||||| |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  30420523 taggtttttttttacaatttcttcattgaggggtggttttggatcaatttttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaa 30420622  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  30420623 taagtgattttcacatagatct 30420644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 36233855 - 36233972
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcatttt-taaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||| || |||||| ||||| ||||||||||| |||| ||  | |||| |||||| | |||||  || |||| ||| ||||||||||||||||||    
T  36233855 ttttctcttgcaatttcttcattgaggggtggttttgggtcaattcatgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataag 36233954  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||||||||    
T  36233955 tgattttcacatagatct 36233972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 45128051 - 45128171
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||||||||  |||||| ||||| ||||||||||| |||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  45128051 taggttttctcttcccatttcttcattga-gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaa 45128149  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  45128150 taagtgactttcacatagatct 45128171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 580883 - 580767
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  | | || ||| | | ||||||||   ||||||| ||| ||||||| ||||    
T  580883 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataagatgaa 580784  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  580783 ttctagccactaggcta 580767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 357
Target Start/End: Complemental strand, 40660165 - 40660045
Alignment:
Q  235 tttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatcta 333  Q
    ||||| |||||||||  |||||||| ||||| |||||||||||||||| || || |||| ||||||    ||||  ||  ||||||||||||||||||||    
T  40660165 tttagattttctcttagagtttcttcattga-gggtggttttgagtcaattcttgacctgaaatcacacatcttcatc--tttttctctatttcaatcta 40660069  T
Q  334 aataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||    
T  40660068 aataagtgattttcacatagatct 40660045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 192
Target Start/End: Original strand, 10207643 - 10207746
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattc 188  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||  |   |||||||| |  ||||||| ||||||||| ||| ||||||| |||||||    
T  10207643 ccgtgagcatagctcagttggtaggataatgcattattatatgcagtggtcggagtttgaactccggacacttcacttattcaccttataagatgaattc 10207742  T
Q  189 tagc 192  Q
    ||||    
T  10207743 tagc 10207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 17115643 - 17115528
Alignment:
Q  88 tcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    ||||||||||||| ||| |||||||||| | || ||||||||||||| ||   |||||| | | |||||||||  || |||| |||||||||||||||||    
T  17115643 tcccgtgagcatagctcagttggtaggacactgtattattatatgcaaaggtcggagttcgaaccccggacatcccatttattcactttataaggtgaat 17115544  T
Q  187 tctagccactaggcta 202  Q
    |||||| |||||||||    
T  17115543 tctagcaactaggcta 17115528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 8234892 - 8234776
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||| |||||||||||| |  | | || ||| | | ||||||||   ||||||| ||| ||||||||||||    
T  8234892 gtcccgtgagcatagctcagttggtaggacaatacattattatatgtaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 8234793  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  8234792 ttctagccactaggcta 8234776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 31581877 - 31581833
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  31581877 ttttctctctatttcaatctaaataagtgattttcacatagatct 31581833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 44422122 - 44422218
Alignment:
Q  106 ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||||| ||||||||||||||||||  ||  |||||| | | ||||||||   ||||||| ||||||||||||| ||||||| |||||||||||    
T  44422122 ttggtaggacaatgcattattatatgcagggatcggagttcgaaccccggacaccccacttattcactttataaggtaaattctaaccactaggcta 44422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 15392313 - 15392195
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgca-tagactggagtttgcatcccggacatttcacttatccactttataaggt 182  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| |  |||| |  ||| | | | ||||||  |||||||| |||||||||||||    
T  15392313 aagtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggagac-gaggttcgaacctcggacacctcacttattcactttataaggt 15392215  T
Q  183 gaattctagccactaggcta 202  Q
    | ||| ||||||||||||||    
T  15392214 gtattttagccactaggcta 15392195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 20122574 - 20122459
Alignment:
Q  88 tcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||| |  | | || ||| | | ||||||||   ||||||| ||  |||||||||||||    
T  20122574 tcccgtgagcatagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacacgccacttattcatcttataaggtgaat 20122475  T
Q  187 tctagccactaggcta 202  Q
    ||||||||||||||||    
T  20122474 tctagccactaggcta 20122459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 41713000 - 41712881
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| ||||||||||| || | || || || | |||||| |  | ||  ||||||| ||||||||| ||||||||    
T  41713000 taggttttctcttacaatttcttcattgaggggtggttttgggttaattcttgacgtgaaatcacccattttcatcattttctctctattttaatctaaa 41712901  T
Q  336 taagtgattttcacatagat 355  Q
    ||||||||||||||||||||    
T  41712900 taagtgattttcacatagat 41712881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 32680816 - 32680696
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaa 334  Q
    ||||||||||||||| ||||||| ||||  ||||||||||  ||| ||| || |||| |||||| ||| ||||  || |||| |||||||||||||||||    
T  32680816 taggttttctcttcccgtttcttcattgg-gggtggttttcggtcgattcttgacctgaaatca-ctcatcttcatctttttctctctatttcaatctaa 32680719  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||| ||||||||||||||    
T  32680718 ataagtgactttcacatagatct 32680696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 330
Target Start/End: Complemental strand, 33229223 - 33229129
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaat 330  Q
    ||||||||||||| | ||||||| ||||||||||||||||| ||| ||| || | || |||||| |||||||  || ||||||||||||||||||    
T  33229223 taggttttctcttactgtttcttcattgaagggtggttttgggtcaattattgagctaaaatcacctctcttcatctttttttctctatttcaat 33229129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 41196016 - 41195926
Alignment:
Q  112 ggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||||| ||||||||| || | |||||| | |||||| |||  ||| |||| ||| | |||||||||||||||||||||||||||    
T  41196016 ggataatgcattgttatatgcagaggccggagttcgaatcccgaacacctcatttattcacctaataaggtgaattctagccactaggcta 41195926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 31564088 - 31564137
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  31564088 aagtcccgtgagcataactcagttggtaggacaatgcattattatatgca 31564137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 34620512 - 34620625
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    |||| |||||||||| |||| ||||||||| ||||||||||||||||||  |  ||| ||||| | ||| |||| |  | |||| ||| |||||||||||    
T  34620512 agtctcgtgagcatagctcggttggtaggacaatgcattattatatgcaagggttggggtttgaaccccagacactctatttattcaccttataaggtga 34620611  T
Q  185 attctagccactag 198  Q
    ||||||||||||||    
T  34620612 attctagccactag 34620625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 22421659 - 22421703
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  22421659 ttttctctctatttcaatctaaataagtgactttcacatagatct 22421703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 26025567 - 26025523
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  26025567 ttttctctctatttcaatctaaataagtggttttcacatagatct 26025523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 42949638 - 42949682
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  42949638 ttttctctttatttcaatctaaataagtgattttcacatagatct 42949682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 3270377 - 3270342
Alignment:
Q  322 tatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||||||||||||||    
T  3270377 tatttcaatctaaataagtgattttcacatagatct 3270342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 10262734 - 10262781
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  10262734 gtcccgtgagcataactcagttggtaggacaatgcattattatatgca 10262781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 356
Target Start/End: Original strand, 18694971 - 18695014
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatc 356  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  18694971 ttttctctctatttcaatctaaataagtgatttttacatagatc 18695014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 16028203 - 16028089
Alignment:
Q  92 gtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattcta 190  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||  |   || ||| | |  || |||||  ||||||| |||||||||||||||||||||    
T  16028203 gtgagtataactcagttggtaggacaatgcattattatatgcagtggtcggggttcgaactccagacatcccacttattcactttataaggtgaattcta 16028104  T
Q  191 gccactaggctatct 205  Q
    ||||| || ||||||    
T  16028103 gccaccagactatct 16028089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 27949352 - 27949390
Alignment:
Q  319 ctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  27949352 ctctgtttcaatctaaataagtgattttcacatagatct 27949390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 30474295 - 30474185
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  | | |  ||| | | ||| ||||   ||||||| ||| ||||||||||||    
T  30474295 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccgaggttcgaaccccagacaccccacttattcaccttataaggtgaa 30474196  T
Q  186 ttctagccact 196  Q
    |||||||||||    
T  30474195 ttctagccact 30474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 10248008 - 10248061
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattttt 287  Q
    |||||||||||||||| || |||||||||||| ||||||||||| |||| ||||    
T  10248008 ctttaggttttctctttcaatttctttattgaggggtggttttgggtcagtttt 10248061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 11837049 - 11837106
Alignment:
Q  151 cccggacatttcacttatccactttataaggtgaattctagccactaggctatctaac 208  Q
    ||||||||  |||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  11837049 cccggacacctcacttattcaccttataaagtgaattctagccactaggctacctaac 11837106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 32913088 - 32913209
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||||||| || || |  || || |||||||||||  ||| || || |||| |||||| | |||||  || |||| ||| ||||||||| ||||    
T  32913088 taggttttctcttctagattttaaatcgaggggtggttttggatcaattcttgacctgaaatcacccctcttgatccttttctctatatttcaatttaaa 32913187  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  32913188 taagtgattttcacatagatct 32913209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 38402791 - 38402836
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatat 130  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||    
T  38402791 agtcccgtgagcataactcggttggtaggacaatgcattattatat 38402836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 3179395 - 3179435
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  3179395 cacttattcaccttataaggtgaattctagccactaggcta 3179435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 25050341 - 25050293
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  25050341 agtccagtgagcatagctcagttggtaggataatgcattattatatgca 25050293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 26807181 - 26807137
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    
T  26807181 ccgtgagcataactcagttggtaggacaatgcattattatatgca 26807137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 27477078 - 27477122
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||||    
T  27477078 ttttctctatatttcaatctaaataagtaattttcacatagatct 27477122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 36481067 - 36481123
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtt 145  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||| | ||||||||    
T  36481067 ccgtgagcatagctcagttggtaggacaatgcattattatatgcatgggctggagtt 36481123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 39642017 - 39641973
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||    
T  39642017 ttttctctctatttcaatttaaataaatgattttcacatagatct 39641973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 1836583 - 1836702
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    ||||||||||| || ||| |||||||||| |||||||||||||||| |   |  || ||| | | ||||||||    |||||| |||  |||||||||||    
T  1836583 gtcccgtgagcctagctcagttggtaggacaatgcattattatatgaaggaatcggggttcgaaccccggacaccctacttattcaccatataaggtgaa 1836682  T
Q  186 ttctagccactaggctatct 205  Q
    ||||||||||||||||||||    
T  1836683 ttctagccactaggctatct 1836702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 3179319 - 3179366
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||    
T  3179319 gtcccgtgagcataactcagttggtagaacaatgcattattatatgca 3179366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 4192762 - 4192801
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacata 352  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  4192762 ttttctctatatttcaatctaaataagtgattttcacata 4192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 7015941 - 7015826
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||| || |||||| ||||  || |||||||| |||| || || |||| |||||| | ||| |  || |||| ||| |||||||||||||||||     
T  7015941 ttttctcttacaatttcttcattgggggttggttttgggtcaattcttgacctgaaatcacccctcctaatctttttctctttatttcaatctaaataat 7015842  T
Q  340 tgattttcacatagat 355  Q
    ||||||||||||||||    
T  7015841 tgattttcacatagat 7015826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 22297556 - 22297505
Alignment:
Q  83 acaagtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||| |||||||||| ||| |||||||||| ||||||||||||||||||    
T  22297556 acaagtctcgtgagcatagctcagttggtaggacaatgcattattatatgca 22297505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 41699101 - 41699144
Alignment:
Q  91 cgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||| |||||||||||| ||||||||||||||||    
T  41699101 cgtgagcataactcagttggtaggatattgcattattatatgca 41699144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 352
Target Start/End: Original strand, 3308851 - 3308881
Alignment:
Q  322 tatttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||||    
T  3308851 tatttcaatctaaataagtgattttcacata 3308881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 18255692 - 18255738
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatctaac 208  Q
    ||||||| ||| ||||||| ||||||||||||||||| |||||||||    
T  18255692 cacttattcacattataagatgaattctagccactagactatctaac 18255738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 30923631 - 30923589
Alignment:
Q  314 tttttctctatttcaatctaaataagtgattttcacatagatc 356  Q
    |||| |||||||||||||||||||| ||||||| |||||||||    
T  30923631 ttttactctatttcaatctaaataaatgatttttacatagatc 30923589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 2557607 - 2557570
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactagg 199  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  2557607 cacttattcaccttataaggtgaattctagccactagg 2557570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 8308098 - 8308140
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||    
T  8308098 ttttttctctaattcaatctaaat--gtgattttcacatagatct 8308140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 11133147 - 11133184
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactagg 199  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  11133147 cacttattcaccttataaggtgaattctagccactagg 11133184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 13719335 - 13719274
Alignment:
Q  295 aatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacatagatc 356  Q
    |||||| |||||| ||| |||| |||| |||||||| ||||||||||||||| | |||||||    
T  13719335 aatcatttctcttcgtctttttctctccatttcaatttaaataagtgatttttatatagatc 13719274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 15690136 - 15690087
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||| ||| |||||||||| |||||||| |||||||||    
T  15690136 aagtcccgtgagcatagctcagttggtaggacaatgcattgttatatgca 15690087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 30472001 - 30471960
Alignment:
Q  156 acatttcacttatccactttataaggtgaattctagccacta 197  Q
    ||||| || |||| ||||||||||||||||||||||||||||    
T  30472001 acattccatttattcactttataaggtgaattctagccacta 30471960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 198
Target Start/End: Original strand, 32943353 - 32943446
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactag 198  Q
    |||||||||| |||||||||||||||||| || |||| ||| | ||  ||||||   ||||||| ||| |||||| || |||| ||||||||||    
T  32943353 gttggtaggacaatgcattattatatgcagaggctggggttcgaatttcggacaccccacttattcaccttataaagtaaattttagccactag 32943446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 33956250 - 33956295
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatat 130  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||    
T  33956250 agtcccgtgagcataactcaattggtaggacaatgcattattatat 33956295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 3021113 - 3021073
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||| |||||||||||||||||||||    
T  3021113 cacttattcaccttataagatgaattctagccactaggcta 3021073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 3037646 - 3037606
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||| ||||||||||    
T  3037646 cacttattcaccttataaggtgaattctaggcactaggcta 3037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 4228055 - 4228099
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||| |||||||||||||| |||||||||||    
T  4228055 ttttatctttatttcaatataaataagtgatttacacatagatct 4228099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 8805790 - 8805834
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||| |||||||||||||||||||| |||||    
T  8805790 ttttctctttatttcaatttaaataagtgattttcacatggatct 8805834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 9418345 - 9418388
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||||    
T  9418345 ttttatctctatttcaatttaa-taagtgattttcacatagatct 9418388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 10237398 - 10237370
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  10237398 tttcaatctaaataagtgattttcacata 10237370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 18209971 - 18209919
Alignment:
Q  156 acatttcacttatccactttataaggtgaattctagccactaggctatctaac 208  Q
    |||| ||| |||| ||| |||||||||||||| |||||||||||||| |||||    
T  18209971 acatctcatttattcaccttataaggtgaattatagccactaggctacctaac 18209919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 25086880 - 25087005
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||| | ||||||||||| ||| ||| || |||| |||||| | |||||  || ||||   ||||||| |||||| |    
T  25086880 taggttttctcttccggtttcttcatttaggggtggttttgggtcaattattgacctgaaatcacccctcttcatctttttccatctatttgaatctata 25086979  T
Q  336 ta----agtgattttcacatagatct 357  Q
    ||    ||||||||||||||||||||    
T  25086980 taagtgagtgattttcacatagatct 25087005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 27495532 - 27495580
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||| ||||||| || |||||||||| ||||||||||||||||||    
T  27495532 agtcccgtaagcataattcagttggtaggacaatgcattattatatgca 27495580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 34018094 - 34018054
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||||||||||||| |||||||||||    
T  34018094 cacttattcaccttataaggtgaattctaaccactaggcta 34018054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 44721725 - 44721685
Alignment:
Q  165 ttatccactttataaggtgaattctagccactaggctatct 205  Q
    |||| ||| |||||||||||||||||||||||||| |||||    
T  44721725 ttattcaccttataaggtgaattctagccactaggttatct 44721685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 33342286 - 33342408
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| ||||| |||||||| ||||| ||||||||||| |||| |||||||||| |||||| | |||||  || ||||||||||| |||||||||||    
T  33342286 taggttttttcttcgagtttcttcattgaggggtggttttgggtcaatttttaacctgaaatcacccctcttcatccttttttctctaattcaatctaaa 33342385  T
Q  336 taagtga-ttttcacatagatct 357  Q
    ||||||| |||||||||||||||    
T  33342386 taagtgatttttcacatagatct 33342408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 9498836 - 9498718
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcatttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaat 336  Q
    ||||||||||||| || |||||| ||||| ||||||||||| |||| || | |||| |||||| | |||||  || |||| ||| |||||||||||||||    
T  9498836 taggttttctcttacaatttcttcattgaggggtggttttgggtcaattcttacctgaaatcacccctcttcatctttttatctttatttcaatctaaat 9498737  T
Q  337 aagtgattttcacatagat 355  Q
    |||||||||||||||||||    
T  9498736 aagtgattttcacatagat 9498718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 11725535 - 11725652
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||| ||||||||| ||||| ||||||||||| |||| || || |||| |||||| | ||||| ||| |||| ||| ||||||||||||||||||    
T  11725535 ttttctctttcagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcgtctttttctctttatttcaatctaaataag 11725634  T
Q  340 tgattttcacatagatct 357  Q
    || |||||||||||||||    
T  11725635 tgtttttcacatagatct 11725652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 11196745 - 11196860
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    |||||||||| ||||||||  |||| ||||||||||| |||| || || |||| ||||||||  ||||  ||  ||||||||||||||||||||||||||    
T  11196745 ttttctcttctagtttcttcgttgaggggtggttttgggtcaattcttgacctgaaatcatccatcttcatc--tttttctctatttcaatctaaataag 11196842  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||||||||    
T  11196843 tgattttcacatagatct 11196860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 15597402 - 15597280
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttc-tctatttcaatctaa 334  Q
    |||||||||||||||||| | |||||||| |||||||||| ||||| ||||| |||| |||||| | |||||  || |||| |  || ||||||||||||    
T  15597402 taggttttctcttccagtatttttattgaggggtggttttcagtcaatttttgacctgaaatcacccctcttcatctttttctagtccatttcaatctaa 15597303  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||    
T  15597302 ataagtgattttcacatagatct 15597280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 44100167 - 44100046
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| | ||||||| ||||| ||||||||||| ||| ||| || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  44100167 taggttttctctttcggtttcttcattgaggggtggttttgggtcgattcttgacctaaaatcacccctcttcatctttttctctatatttcaatctaaa 44100068  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||| ||||||||||||||||    
T  44100067 taagttattttcacatagatct 44100046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 44577885 - 44578006
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| | ||||||| ||||| ||||||||||| |||| ||||| |||| ||||||   |||||  || |||| |||||||||||||||||     
T  44577885 taggttttctcttactgtttcttcattgaggggtggttttgggtcaatttttgacctaaaatcactcctcttcatctttttctctctatttcaatctaac 44577984  T
Q  336 taagtgattttcacatagatct 357  Q
    |||||||||| |||||||||||    
T  44577985 taagtgatttacacatagatct 44578006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 9619589 - 9619474
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||| || |||||| ||||| ||||||||||| |||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||||||    
T  9619589 ttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataag 9619490  T
Q  340 tgattttcacatagat 355  Q
    ||||||||||||||||    
T  9619489 tgattttcacatagat 9619474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 28239681 - 28239804
Alignment:
Q  237 taggttttctcttccagtttctttattgaaggg-tggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaa 334  Q
    |||||||||||||||| |||||| ||||| ||| || ||||| |||| ||||| |||| |||||| |||||||  || |||| |||||||||||||||||    
T  28239681 taggttttctcttccattttcttcattgagggggtgattttgggtcaatttttgacctgaaatcacctctcttcatctttttctctctatttcaatctaa 28239780  T
Q  335 ataagtg-attttcacatagatct 357  Q
    |||||||  |||||||||||||||    
T  28239781 ataagtgttttttcacatagatct 28239804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 4808816 - 4808934
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    |||||||||| || |||||| ||||| ||||||||||| |||| || || |||| |||| | | |||||  || |||||||| ||||||||| |||||||    
T  4808816 gttttctcttacaatttcttcattgaggggtggttttgggtcaattcttgacctgaaattacccctcttcatctttttttctttatttcaatgtaaataa 4808915  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||||||||    
T  4808916 gtgattttcacatagatct 4808934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 358
Target Start/End: Original strand, 17949096 - 17949218
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||| |||||| ||||||||| ||||| ||||| ||||| |||| || || |||| |||||| | |||||   | |||| ||||||||||||||||||    
T  17949096 taggttgtctcttacagtttcttcattgatgggtgattttgggtcaattattgacctgaaatcacccctcttcacctttttctctctatttcaatctaaa 17949195  T
Q  336 taagtgattttcacatagatctt 358  Q
    |||| ||||||||||||||||||    
T  17949196 taagcgattttcacatagatctt 17949218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 35580303 - 35580428
Alignment:
Q  234 ctttaggttttctcttccagtttctttattga-agggtggttttgagtca-tttttaaccttaaatcatctc-tctttgtcattttttctctatttcaat 330  Q
    ||||||||||| ||||||| |||||| ||||| |||||||||||| |||| ||||| || | |||||| ||| ||||  || |||| |||||||||||||    
T  35580303 ctttaggttttttcttccaatttcttcattgagagggtggttttgggtcaatttttgacataaaatca-ctcatcttcatctttttctctctatttcaat 35580401  T
Q  331 ctaaataagtgattttcacatagatct 357  Q
     ||||||||||||||||||||||||||    
T  35580402 ttaaataagtgattttcacatagatct 35580428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 43890360 - 43890239
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattttta-accttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| |||||||||||  ||||||||  |||| |||||| | |||||  || |||| ||| || |||||||||||    
T  43890360 taggttttctcttacaatttcttcattgaggggtggttttggatcattttttgacctgaaatcacccctcttcatctttttctctttaattcaatctaaa 43890261  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||| ||||||||||    
T  43890260 taagtgattttgacatagatct 43890239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 86 - 208
Target Start/End: Original strand, 30461530 - 30461653
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    |||||||| |||||| |||  |||||||||||| | |||||||||||||    |||| ||| | |  || ||||| |||||||| ||| |||||||||||    
T  30461530 agtcccgtaagcatagctcaattggtaggataaggtattattatatgcagcacctggggttcgaactccagacatctcacttattcaccttataaggtga 30461629  T
Q  185 attctagccactaggctatctaac 208  Q
    ||||||||||||||||||||||||    
T  30461630 attctagccactaggctatctaac 30461653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 357
Target Start/End: Complemental strand, 32724723 - 32724603
Alignment:
Q  239 ggttttctcttccagtttctttattgaaggg-tggttttgagtca--tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||| ||||||||  ||||| ||| |||||||| ||||  || || |||| ||||||  ||||||  || |||| ||||||||||||||||||    
T  32724723 ggttttctcttacagtttctccattgagggggtggttttgggtcaaattattgacctgaaatcacttctcttcatc-ttttctctctatttcaatctaaa 32724625  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  32724624 taagtgattttcacatagatct 32724603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 17987549 - 17987436
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    ||||||||| |||| ||| |||||||||||||||||||||||||||||  | | |||||| | | ||||||||   || |||| ||| ||||||||||||    
T  17987549 gtcccgtgaacatagctcagttggtaggataatgcattattatatgcaggggccggagttcgaaccccggacaccccaattattcaccttataaggtgaa 17987450  T
Q  186 ttctagccactagg 199  Q
    || |||||||||||    
T  17987449 ttatagccactagg 17987436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 26703986 - 26703881
Alignment:
Q  91 cgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattct 189  Q
    |||||||||||||| |||||||||| ||||||||||||||||||  |   || ||| | |||||| |||  |||||||| ||| ||||||||||||||||    
T  26703986 cgtgagcataactcagttggtaggacaatgcattattatatgcaagggtcggggttcgaatcccgaacacctcacttattcaccttataaggtgaattct 26703887  T
Q  190 agccac 195  Q
    ||||||    
T  26703886 agccac 26703881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 4798641 - 4798529
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||||  | | || ||| | | ||||||||   ||||||| ||| || |||||||||    
T  4798641 gtcccgtgagtatagctcagttggtaggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgtaaggtgaa 4798542  T
Q  186 ttctagccactag 198  Q
    |||||||||||||    
T  4798541 ttctagccactag 4798529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 15042465 - 15042349
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  | | || ||| | | ||||||||   ||||||| ||| ||||||||||||    
T  15042465 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 15042366  T
Q  186 ttctagccactaggcta 202  Q
    ||||| |||||| ||||    
T  15042365 ttctaaccactacgcta 15042349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 33298705 - 33298826
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcatttttaaccttaaatcatctctctttgtcatttt----ttctctatttcaatctaaa 335  Q
    |||||||||||||| ||||| ||| | | |||||||||||| |||||| | || ||| || || ||||  || ||||    ||||||| |||||||||||    
T  33298705 gttttctcttccagcttcttcattaaggtgtggttttgagttatttttgagctgaaaacacctatcttcatctttttatttttctctaattcaatctaaa 33298804  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  33298805 taagtgattttcacatagatct 33298826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 40249980 - 40249862
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggaca--tttcacttatccactttataaggtg 183  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||  ||  |||||| | |  |||||||  |  ||||||| ||| ||||||| ||    
T  40249980 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagtgatcggagttcgaactccggacacctcccacttattcaccttataagatg 40249881  T
Q  184 aattctagccactaggcta 202  Q
    ||||||| |||||||||||    
T  40249880 aattctaaccactaggcta 40249862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 10970260 - 10970374
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||  | |||| |||   | |||| |||   ||||||| ||| ||||||| |||    
T  10970260 agtcctgtgagcatagctcagttggtaggataatgcattattatatgcaggggctggggttcaaaccccgaacaccccacttattcaccttataagatga 10970359  T
Q  185 attctagccactagg 199  Q
    |||||||||||||||    
T  10970360 attctagccactagg 10970374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 39484472 - 39484354
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtg 183  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||||||  | | || ||| | || |||||||   ||||||| ||  ||||||||||    
T  39484472 aagtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaatgccggacaccccacttattcatcttataaggtg 39484373  T
Q  184 aattctagccactaggcta 202  Q
    ||||||| |||||| ||||    
T  39484372 aattctaaccactacgcta 39484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 2655722 - 2655839
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||| || |||||| |||||  |||||||||| |||| || || ||||  ||||| |  ||||  || |||| ||| ||||||||||||||||||    
T  2655722 ttttctcttacaatttcttcattgagcggtggttttgggtcaattcttgacctgcaatcacccatcttcatctttttctctttatttcaatctaaataag 2655821  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||||||||    
T  2655822 tgattttcacatagatct 2655839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 14907159 - 14907038
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| || || |||||  ||| || || |||| |||||| |  ||||  || |||| ||| ||||||||||||||    
T  14907159 taggttttctcttacaatttcttcattgagggatgattttggatcaattcttgacctgaaatcacccatcttcatctttttctctttatttcaatctaaa 14907060  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  14907059 taagtgattttcacatagatct 14907038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 24074520 - 24074617
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||||| |||||||||||||||| |  |  || |||| | | | ||||||  |||||||| ||| |||||||||||||||||||||||||||||    
T  24074520 gttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttattcaccttataaggtgaattctagccactaggcta 24074617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 42448263 - 42448142
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||| ||||||  | ||||| ||||||||||| || | || || |||| |||||| | |||||  || |||| ||||||||||||||||||    
T  42448263 taggttttgtcttacagttttgtcattgaggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaa 42448164  T
Q  336 taagtgattttcacatagatct 357  Q
    |||||||||| || ||||||||    
T  42448163 taagtgatttacatatagatct 42448142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 8682376 - 8682492
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||| | ||||||||||||  |  ||||||| | | |||||||| | | ||||| || | |||||||||||    
T  8682376 gtcccgtgagcatagctcagttggtaggacaattctttattatatgcaggggttggagttcgaaccccggacagtccccttattcattatataaggtgaa 8682475  T
Q  186 ttctagccactaggcta 202  Q
    |||||| ||||||||||    
T  8682476 ttctagtcactaggcta 8682492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 353
Target Start/End: Original strand, 12184212 - 12184251
Alignment:
Q  314 tttttctctatttcaatctaaataagtgattttcacatag 353  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  12184212 tttttctctatttcaatctaaataagtgtttttcacatag 12184251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 353
Target Start/End: Original strand, 12428640 - 12428679
Alignment:
Q  314 tttttctctatttcaatctaaataagtgattttcacatag 353  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  12428640 tttttctctatttcaatctaaataagtgtttttcacatag 12428679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 43192506 - 43192459
Alignment:
Q  310 tcattttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  43192506 tcattttctctctatttcaatctaaataagtggtttttacatagatct 43192459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 43468729 - 43468686
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  43468729 cacttattcaccttataaggtgaattctagccactaggctatct 43468686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 44360961 - 44360918
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  44360961 cacttatccaccttataaggtgaattctagccactagactatct 44360918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 356
Target Start/End: Original strand, 19876147 - 19876181
Alignment:
Q  322 tatttcaatctaaataagtgattttcacatagatc 356  Q
    |||||||||||||||||||||||||||||||||||    
T  19876147 tatttcaatctaaataagtgattttcacatagatc 19876181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 37566037 - 37565995
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagat 355  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  37566037 ttttatctctatttcaatctaaataattgattttcacatagat 37565995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 6064439 - 6064492
Alignment:
Q  153 cggacatttcacttatccactttataaggtgaattctagccactaggctatcta 206  Q
    |||||| ||||||||| ||  ||||||||||||||||||||||||| |||||||    
T  6064439 cggacacttcacttattcagcttataaggtgaattctagccactagactatcta 6064492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 357
Target Start/End: Original strand, 9072582 - 9072687
Alignment:
Q  253 gtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacat 351  Q
    ||||||| ||||  ||||||||||| |||| ||||| || | |||||| | |||||  || |||| ||||||||||||| ||||||||||| ||||||||    
T  9072582 gtttcttcattggggggtggttttgggtcaatttttgacttgaaatcacccctcttcatctttttctctctatttcaatttaaataagtgactttcacat 9072681  T
Q  352 agatct 357  Q
    | ||||    
T  9072682 aaatct 9072687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 24608584 - 24608467
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||  | | || ||| | | ||| ||||    |||||| ||| |||||||||||    
T  24608584 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcaccttataaggtga 24608485  T
Q  185 attctagccactaggcta 202  Q
    |||||||||  |||||||    
T  24608484 attctagccgttaggcta 24608467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 33895931 - 33896051
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||  ||||||| ||||  ||||||||||| |||| || || | || || ||| | |||||  || |||| ||||||||| ||||||||    
T  33895931 taggttttctcttcgcgtttcttcattgg-gggtggttttgggtcaattcttgatctaaagtcacccctcttcatctttttctctctatttaaatctaaa 33896029  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  33896030 taagtgactttcacatagatct 33896051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 36359783 - 36359706
Alignment:
Q  121 attattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactag 198  Q
    |||||||||||||  | | |||||| | ||||||||||   ||||||| ||| |||||||||||||||||||||||||    
T  36359783 attattatatgcaggggccggagttcgaatcccggacaccccacttattcaccttataaggtgaattctagccactag 36359706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 3379746 - 3379640
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||| |||||||||||||| |||||||||  | |||| ||| | | ||| ||||   ||||||| ||| ||||||||||||    
T  3379746 gtcccgtgagcataactcagttgataggataatgcattgttatatgcaggggctgg-gttcg-aaccccgacaccccacttattcaccttataaggtgaa 3379649  T
Q  186 ttctagcca 194  Q
    |||||||||    
T  3379648 ttctagcca 3379640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 9524952 - 9525068
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  | | || ||| | | ||| ||||    |||||| ||| ||||||||||||    
T  9524952 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccctacttattcaccttataaggtgaa 9525051  T
Q  186 ttctagccactaggcta 202  Q
    ||||||||  |||||||    
T  9525052 ttctagccgttaggcta 9525068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 28465612 - 28465660
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  28465612 agtcccgtgagcatagctcagttggtaggacaatgcattattatatgca 28465660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 23857424 - 23857377
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  23857424 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgca 23857377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 27822065 - 27822112
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||| |||| |||||||| |||||||||||||||||||||||||||||    
T  27822065 gtcctgtgaacataactcagttggtaggataatgcattattatatgca 27822112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 33982261 - 33982304
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||    
T  33982261 cacttattcactttataaggtgaattctagccaatagactatct 33982304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 40329696 - 40329657
Alignment:
Q  96 gcataactc-gttggtaggataatgcattattatatgcat 134  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  40329696 gcataactcagttggtaggataatgcattattatatgcat 40329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 16794147 - 16794252
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    |||||| || |||||||||||||||||| ||||||| | ||| ||||| || | |||||| |  ||||  || |||| |||||| |||||||||||||||    
T  16794147 ttttctttttcagtttctttattgaagg-tggtttttaatcaatttttgacttgaaatcacccatcttcatctttttctctctaattcaatctaaataag 16794245  T
Q  340 tgatttt 346  Q
    |||||||    
T  16794246 tgatttt 16794252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 34611657 - 34611774
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||||| ||||||||| || || ||||||||||| |||| || || |||| |||||| ||| ||||  |  |||| | ||||||||| |||||||||    
T  34611657 ttttctcttacagtttcttcatcgaggggtggttttgggtcaattcttgacctgaaatca-ctcatcttcatatttttctttctatttcagtctaaataa 34611755  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||| ||||    
T  34611756 gtgattttcacataaatct 34611774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 13702377 - 13702336
Alignment:
Q  161 tcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||| ||| |||||||||||||||||||||||| ||||    
T  13702377 tcacttattcaccttataaggtgaattctagccactaagcta 13702336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 29108657 - 29108702
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatg 131  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29108657 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 29108702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 41225765 - 41225720
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatg 131  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  41225765 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 41225720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 5245552 - 5245592
Alignment:
Q  165 ttatccactttataaggtgaattctagccactaggctatct 205  Q
    |||| ||| ||||||||||||||||||||| ||||||||||    
T  5245552 ttattcaccttataaggtgaattctagccattaggctatct 5245592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 7649599 - 7649639
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  7649599 cacttattcaccttacaaggtgaattctagccactaggcta 7649639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 14585606 - 14585634
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  14585606 tttcaatctaaataagtgattttcacata 14585634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 26469379 - 26469351
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  26469379 tttcaatctaaataagtgattttcacata 26469351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 352
Target Start/End: Complemental strand, 27747347 - 27747231
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||||  ||||| ||| | |||| |||||| |||| ||||| || | |||||| |  ||||  || |||| |||| |||||||| ||||    
T  27747347 taggttttctcttccaacttcttcattaaggggtagttttgggtcaatttttgacttgaaatcaccattcttcatctttttatctccatttcaatttaaa 27747248  T
Q  336 taagtgattttcacata 352  Q
    ||||| |||||||||||    
T  27747247 taagtaattttcacata 27747231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 355
Target Start/End: Complemental strand, 39153293 - 39153261
Alignment:
Q  323 atttcaatctaaataagtgattttcacatagat 355  Q
    |||||||| ||||||||||||||||||||||||    
T  39153293 atttcaatttaaataagtgattttcacatagat 39153261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 42761962 - 42761918
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||    
T  42761962 ccgtgagcataactcagttggtatgacaatgcattattatatgca 42761918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 7e-25; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 234 - 355
Target Start/End: Complemental strand, 9529116 - 9528994
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    |||||||||||||||| ||||||||| | ||| ||||||||||| |||| || || |||| |||||| | |||||| || |||| ||| |||||||||||    
T  9529116 ctttaggttttctcttacagtttcttcactgaggggtggttttgggtcaattcttgacctgaaatcacccctctttatctttttctctttatttcaatct 9529017  T
Q  333 aaataagtgattttcacatagat 355  Q
    |||||||||||||||||||||||    
T  9529016 aaataagtgattttcacatagat 9528994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 35965210 - 35965088
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||||| ||||| ||||| ||||||||||| |||| ||||| |||| |||||| |||||||  || |||| ||||||||||||||| ||    
T  35965210 taggttttctcttccagattcttcattgaggggtggttttgggtcaattttttacctgaaatcacctctcttcatctttttctctctatttcaatctgaa 35965111  T
Q  336 taagtga-ttttcacatagatct 357  Q
    ||||||| |||||||||||||||    
T  35965110 taagtgatttttcacatagatct 35965088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 1531760 - 1531882
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttt-tctctatttcaatctaa 334  Q
    ||||||||||||| ||||||||| ||||| ||||||| ||| |||| || || |||| |||||| | |||||| || ||| | |||||||||||||||||    
T  1531760 taggttttctcttacagtttcttcattgaggggtggtattgggtcaattcttgacctgaaatcacccctctttatcttttctctctctatttcaatctaa 1531859  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||    
T  1531860 ataagtgattttcacatagatct 1531882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 3465577 - 3465690
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||  | | |||||| | | ||||||||   ||||||| ||| |||||||||||    
T  3465577 agtcccgtaagcataactcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttattcaccttataaggtga 3465676  T
Q  185 attctagccactag 198  Q
    ||||||||||||||    
T  3465677 attctagccactag 3465690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 33944463 - 33944347
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  | | || ||| | | | || | | | ||||||| || |||||||||||||    
T  33944463 gtcccgtgagcataactcagttggtaggataatgcattattatatgcaggggccggggttcgaacctcgaatactccacttattcattttataaggtgaa 33944364  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  33944363 ttctagccactaggcta 33944347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 53291437 - 53291541
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |   ||| |||| ||||||||||    |||||| ||| ||||||||||||    
T  53291437 gtcccgtgagcataactcagttggtaggataatgcattattatatgcatgggtcggaatttgaatcccggacacccaacttattcaccttataaggtgaa 53291536  T
Q  186 ttcta 190  Q
    |||||    
T  53291537 ttcta 53291541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 10389988 - 10389867
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaa 334  Q
    |||||||||||||  |||||||| ||||| ||||||||||| |||| || || |||| |||||| ||| ||||  || |||| |||||||||||||||||    
T  10389988 taggttttctcttatagtttcttcattgaggggtggttttgggtcaattcttgacctgaaatca-ctcatcttcatctttttctctctatttcaatctaa 10389890  T
Q  335 ataagtgattttcacatagatct 357  Q
    |||||||| ||||||||||||||    
T  10389889 ataagtgactttcacatagatct 10389867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 9283765 - 9283886
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||| |||||| || |||||| ||||| ||||||||||| |||| |  ||||||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  9283765 taggttatctcttacaatttcttcattgaggggtggttttgggtcaatacttaacctgaaatcacccctcttcatcgttttctctttatttcaatctaaa 9283864  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||| ||||||||||    
T  9283865 taagtgatttttacatagatct 9283886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 47416738 - 47416859
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| ||||| ||||| |||| || || || | |||||| | |||||  || |||| ||| ||||||||||||||    
T  47416738 taggttttctcttacaatttcttcattgaggggtgattttgggtcaattattgacttgaaatcacccctcttcatctttttctctttatttcaatctaaa 47416837  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  47416838 taagtgattttcacatagatct 47416859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 20753225 - 20753109
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||| |  | | || ||| | | ||||||||   ||||||| ||| ||||||||||||    
T  20753225 gtcccgtgagcatagctcagttggtaggaaaatgcattattatatgtaggggccggggttcgaaccccggacaccacacttattcaccttataaggtgaa 20753126  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  20753125 ttctagccactaggcta 20753109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 38706945 - 38706826
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||| | ||||||| ||||| ||||||||||| |||| || || | || |||||| |  ||||  || |||| ||||||||||||||||||    
T  38706945 taggttttttcttactgtttcttcattgaggggtggttttgggtcaattcttgatctaaaatcacccttcttcatctttttctctctatttcaatctaaa 38706846  T
Q  336 taagtgattttcacatagat 355  Q
    ||||||||||||||||||||    
T  38706845 taagtgattttcacatagat 38706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 44074849 - 44074964
Alignment:
Q  87 gtcccgtgagcataactcgttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    |||||| ||||||| |||  |||||||| ||||||||||||||||||  || || |||| | ||||||||||   ||||||| ||| |||||||||||||    
T  44074849 gtcccgcgagcatagctcagtggtaggacaatgcattattatatgcagggattgaagttcgaatcccggacaccccacttattcaccttataaggtgaat 44074948  T
Q  187 tctagccactaggcta 202  Q
    | |||||| |||||||    
T  44074949 tttagccattaggcta 44074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 357
Target Start/End: Complemental strand, 34024656 - 34024550
Alignment:
Q  252 agtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcaca 350  Q
    |||||||| ||||| |||||||||||  ||| || || |||| |||||| | |||||  || |||| ||||||||||||||||||||||| |||||||||    
T  34024656 agtttcttcattgaggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaataagttattttcaca 34024557  T
Q  351 tagatct 357  Q
    |||||||    
T  34024556 tagatct 34024550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 9645784 - 9645663
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||| ||| |||| ||||||||| ||||| |||| |||||| |||| || || |||| | |||| | |||||  || |||| ||||||||||||||||||    
T  9645784 taggctttatcttacagtttcttcattgaggggtcgttttgggtcaattcttgacctgatatcacccctcttcatctttttgtctctatttcaatctaaa 9645685  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  9645684 taagtgactttcacatagatct 9645663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 51317846 - 51317961
Alignment:
Q  244 tctcttccagtttctttattgaagggtggttttgagtcattt--ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaaataagt 340  Q
    ||||||| |||||||| ||||| ||||| ||||| |||| ||  || |||| |||||| ||| ||||  || |||| |||||||||||||||||||||||    
T  51317846 tctcttctagtttcttcattgaggggtgattttgggtcaattctttgacctgaaatca-ctcatcttcatctttttctctctatttcaatctaaataagt 51317944  T
Q  341 gattttcacatagatct 357  Q
    |||||||||||||||||    
T  51317945 gattttcacatagatct 51317961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 53616886 - 53616765
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || ||||||  |||| |||||  |||| |||| || || |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  53616886 taggttttctcttacaatttcttcgttgaggggtgactttgggtcaattcttgacctgaaatcaccactcttcatcgttttctctttatttcaatctaaa 53616787  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  53616786 taagtgattttcacatagatct 53616765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 8009517 - 8009473
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  8009517 ttttctctctatttcaatctaaataagtgattttcacatagatct 8009473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 202
Target Start/End: Original strand, 17859773 - 17859889
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||| ||||||||| ||| |||||||||| |||||||||||||| | |  | | |||||| | | |||| |||  |||||||| ||| ||||||||||||    
T  17859773 gtcctgtgagcatagctcagttggtaggacaatgcattattatacgtaggggccggagttcgaaccccgaacacctcacttattcaccttataaggtgaa 17859872  T
Q  186 ttctagccactaggcta 202  Q
    |||||||||||||||||    
T  17859873 ttctagccactaggcta 17859889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 357
Target Start/End: Original strand, 20569123 - 20569227
Alignment:
Q  254 tttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacata 352  Q
    |||||| ||||| ||||||||||| |||| || ||||||| |||||| | |||||  |  |||| ||| ||||||||||||||||| |||||||||||||    
T  20569123 tttcttcattgatgggtggttttgggtcaattcttaacctgaaatcacccctcttcatttttttctctttatttcaatctaaataaatgattttcacata 20569222  T
Q  353 gatct 357  Q
    |||||    
T  20569223 gatct 20569227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 195
Target Start/End: Complemental strand, 24234177 - 24234065
Alignment:
Q  84 caagtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggt 182  Q
    ||||||||||||||||| ||| |||||||||  ||||||||||||||||||  | | || ||||| | ||||||||   ||||||| ||  |||||||||    
T  24234177 caagtcccgtgagcatagctcagttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcatcttataaggt 24234078  T
Q  183 gaattctagccac 195  Q
    |||||||||||||    
T  24234077 gaattctagccac 24234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 25273811 - 25273855
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  25273811 ttttctctctatttcaatctaaataagtgattttcacatagatct 25273855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 43154179 - 43154135
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  43154179 ttttctctctatttcaatctaaataagtgattttcacatagatct 43154135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 47018046 - 47017938
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||  | | || ||| | | ||||||||   ||||||| ||| ||||||||||||    
T  47018046 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttataaggtgaa 47017947  T
Q  186 ttctagcca 194  Q
    |||||||||    
T  47017946 ttctagcca 47017938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 56194450 - 56194574
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggt---tttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    ||||||||||| ||| ||||||| ||||| |||||||   |||| |||| || || |||| ||||||   |||||  || |||| |||||||||||||||    
T  56194450 taggttttctcatcccgtttcttcattgaggggtggtggttttgggtcaattcttgacctgaaatcaaacctcttcatctttttctctctatttcaatct 56194549  T
Q  333 aaataagtgattttcacatagatct 357  Q
    |||||||||| ||||||||||||||    
T  56194550 aaataagtgactttcacatagatct 56194574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 2624436 - 2624473
Alignment:
Q  320 tctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2624436 tctatttcaatctaaataagtgattttcacatagatct 2624473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 9285760 - 9285647
Alignment:
Q  86 agtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||  | |||| ||| | | ||| ||||   |||||||  || |||||||||||    
T  9285760 agtcccgtgagcatagctcaattggtaggacaatgcattattatatgcagggtctggggttcgaaccccagacaccccacttattaaccttataaggtga 9285661  T
Q  185 attctagccactag 198  Q
    ||||||||||||||    
T  9285660 attctagccactag 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 21090006 - 21090126
Alignment:
Q  237 taggttttctcttccagtttctttattgaaggg-tggttttgagtcatt-tttaaccttaaatcatctc-tctttgtcattttttctctatttcaatcta 333  Q
    |||||||||||||| |||||||| ||||| ||| |||||||| |||| | ||| | || |||||| ||| ||||  || |||| ||||||||||||| ||    
T  21090006 taggttttctcttctagtttcttcattgagggggtggttttgggtcaatctttgatctgaaatca-ctcatcttcatctttttctctctatttcaatata 21090104  T
Q  334 aataagtgattttcacatagat 355  Q
    ||||||||||||||||||||||    
T  21090105 aataagtgattttcacatagat 21090126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 43444247 - 43444368
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || || ||| ||||| |||| |||||| |||| ||||| | || |||||| |  ||||  || |||| ||| ||||||||||||||    
T  43444247 taggttttctcttacaattccttcattgaggggtagttttgggtcaatttttgatctgaaatcacccatcttcatctttttctctttatttcaatctaaa 43444346  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||| ||||    
T  43444347 taagtgattttcacatatatct 43444368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 198
Target Start/End: Complemental strand, 55656209 - 55656096
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||||||| |||||| ||| ||| ||||||||||||||  | | ||||||   ||||||||||    |||||| ||| ||||||| |||    
T  55656209 agtcccgtgagcataactcagttggttggacaatacattattatatgcaggggccggagttcaaatcccggacaccctacttattcaccttataagatga 55656110  T
Q  185 attctagccactag 198  Q
    ||||||||||||||    
T  55656109 attctagccactag 55656096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 4643710 - 4643832
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctc--tctttgtcattttttctctatttcaatcta 333  Q
    ||||||||||||| |||| |||| ||||| ||||||||||  || | ||||| |||| |||||| | |  ||||  || |||| ||||||||||||||||    
T  4643710 taggttttctcttacagtctcttcattgaggggtggttttaggtgaatttttgacctgaaatcacccccctcttcatctttttctctctatttcaatcta 4643809  T
Q  334 aataagtgattttcacatagatct 357  Q
    ||||||||| ||||||||||||||    
T  4643810 aataagtga-tttcacatagatct 4643832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 356
Target Start/End: Original strand, 6972664 - 6972783
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| |||||| ||||||| ||||  ||||||||||| |||| || || | || |||||| |||||||  || |||| ||| ||||||||||||||    
T  6972664 taggttttttcttccggtttcttcattgg-gggtggttttgggtcaattcttgatctgaaatcacctctcttcatctttttatctgtatttcaatctaaa 6972762  T
Q  336 taagtgattttcacatagatc 356  Q
    ||||||| ||| |||||||||    
T  6972763 taagtgacttttacatagatc 6972783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 29965565 - 29965609
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  29965565 ttttctctttatttcaatctaaataagtgattttcacatagatct 29965609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 50766746 - 50766623
Alignment:
Q  237 taggttttctcttccagtttcttt--attgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatcta 333  Q
    ||||||||||||| || ||||| |  |||||  |||||||||| |||| || || | || |||||||| |||||  || |||| ||| ||||||||||||    
T  50766746 taggttttctcttacaatttctcttcattgagaggtggttttgggtcaattcttgatctgaaatcatccctcttcatctttttctctttatttcaatcta 50766647  T
Q  334 aataagtgattttcacatagatct 357  Q
    ||||| ||||||||||||||||||    
T  50766646 aataaatgattttcacatagatct 50766623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 2115799 - 2115704
Alignment:
Q  261 attgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacatagat 355  Q
    ||||| ||||||||||| |||| || || |||| ||||||  | ||||  || |||| ||| ||||||||||||||||||||||||||||||||||    
T  2115799 attgaggggtggttttgggtcaattattgacctgaaatcacttttcttcatctttttctctttatttcaatctaaataagtgattttcacatagat 2115704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 5333763 - 5333656
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| |||| ||||| || | |||||| | |||||  || |||| ||||||||||||| ||||    
T  5333763 taggttttctcttcccgtttcttcattg--gggtggttttgggtcaatttttgacatgaaatcacc-ctcttcatctttttctctctatttcaatataaa 5333667  T
Q  336 taagtgatttt 346  Q
    |||||||||||    
T  5333666 taagtgatttt 5333656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 9172471 - 9172424
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  9172471 gtcccgtgagcataactcagttggtaggacaatgcattattatatgca 9172424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 12820429 - 12820386
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  12820429 cacttattcaccttataaggtgaattctagccactaggctatct 12820386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 20266855 - 20266974
Alignment:
Q  85 aagtcccgtgagcataactcgtt-ggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttc-acttatccactttataaggt 182  Q
    ||||||||||||| || ||| || ||||||| ||||||||||||||||||  | |  ||||||| | ||||||||   | |||||| ||| |||||||||    
T  20266855 aagtcccgtgagcttagctcatttggtaggacaatgcattattatatgcaggggccagagtttgaaccccggacacccccacttattcaccttataaggt 20266954  T
Q  183 gaattctagccactaggcta 202  Q
    ||||||||||||| ||||||    
T  20266955 gaattctagccaccaggcta 20266974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 196
Target Start/End: Complemental strand, 34773764 - 34773673
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccact 196  Q
    |||| ||||| ||||||||||||||||||  | |||  ||| | | ||||||||   ||||||| |||||||||||||||||||||||||||    
T  34773764 gttgataggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcactttataaggtgaattctagccact 34773673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 46991283 - 46991244
Alignment:
Q  318 tctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  46991283 tctctatttcaatctaaatgagtgattttcacatagatct 46991244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 52560760 - 52560871
Alignment:
Q  88 tcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaat 186  Q
    ||||||||||||| |||  ||||||||| ||||||||||||||||||  | | || ||| | | | |  ||| ||||||||| ||| |||||||||||||    
T  52560760 tcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccacatacacttcacttattcaccttataaggtgaat 52560859  T
Q  187 tctagccactag 198  Q
    ||||||||||||    
T  52560860 tctagccactag 52560871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 868011 - 868139
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctct-------atttca 328  Q
    ||||||||||||||||||||||| ||||| ||||||||||  ||| ||| || || | |||||| | |||||  || |||| |||||       ||||||    
T  868011 taggttttctcttccagtttcttcattgaggggtggttttaggtcgattcttgacatgaaatcacccctcttcatctttttctctctatttcaaatttca 868110  T
Q  329 atctaaataagtgattttcacatagatct 357  Q
    |||||||||||| ||||||||||||||||    
T  868111 atctaaataagttattttcacatagatct 868139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 5430466 - 5430348
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcac-ttatccactttataaggtg 183  Q
    ||||||||||||||| ||| |||||||||| |||| |||||||||||||  |||  | ||| | | ||||||||   ||| |||| ||| ||||||| ||    
T  5430466 agtcccgtgagcatagctcagttggtaggacaatgtattattatatgcagggaccagggttcgaaccccggacaccccactttattcaccttataagatg 5430367  T
Q  184 aattctagccactaggcta 202  Q
    |||||||||||||||||||    
T  5430366 aattctagccactaggcta 5430348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 10359778 - 10359660
Alignment:
Q  241 ttttctcttccagtttctttattgaaggg-tggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||||| ||||||||| ||||| ||| |||||||| |||| ||||| |||| |||||| |   |||  || |||| |||||||||| ||||||||||    
T  10359778 ttttctctttcagtttcttcattgagggggtggttttgggtcaatttttgacctgaaatcacccaacttcatctttttctctctatttcgatctaaataa 10359679  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||| ||||| ||||    
T  10359678 gtgattttaacatatatct 10359660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 27584082 - 27584036
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatctaac 208  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  27584082 cacttattcaccttataaggtgaattctagccactaggctacctaac 27584036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 32885681 - 32885799
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtg 183  Q
    |||| ||||||||||| ||| |||||||||| ||||||||||||||||||  |   |||||| | | | ||||||   ||||||| ||| ||||||||||    
T  32885681 aagttccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttattcaccttataaggtg 32885780  T
Q  184 aattctagccactaggcta 202  Q
    ||||||| |||||| ||||    
T  32885781 aattctatccactaagcta 32885799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 49280763 - 49280653
Alignment:
Q  93 tgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctag 191  Q
    ||||||||||||  ||||||||| |||| |||||||||||||  |   || ||||| | || |||||  |||||||| ||| |||||||||||||||||     
T  49280763 tgagcataactcaattggtaggacaatgaattattatatgcaggggtcggtgtttgaaccctggacacctcacttattcaccttataaggtgaattctaa 49280664  T
Q  192 ccactaggcta 202  Q
    |||||||||||    
T  49280663 ccactaggcta 49280653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 202
Target Start/End: Complemental strand, 56546551 - 56546433
Alignment:
Q  85 aagtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtg 183  Q
    |||||||||||||||| |||  ||||||||| ||||||||||||||||||  | | || ||| | | | | ||||   ||||||| ||||||| || |||    
T  56546551 aagtcccgtgagcatagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccacagacaccccacttattcactttaaaaagtg 56546452  T
Q  184 aattctagccactaggcta 202  Q
    |||||||||||||||||||    
T  56546451 aattctagccactaggcta 56546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 350
Target Start/End: Original strand, 14183734 - 14183771
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcaca 350  Q
    |||| |||||||||||||||||||||||||||||||||    
T  14183734 ttttctctctatttcaatctaaataagtgattttcaca 14183771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 21405449 - 21405486
Alignment:
Q  318 tctctatttcaatctaaataagtgattttcacatagat 355  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  21405449 tctctatttcaatctaattaagtgattttcacatagat 21405486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 31152589 - 31152630
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctat 203  Q
    ||||||||||| ||||||||||||||||||||||||| ||||    
T  31152589 cacttatccaccttataaggtgaattctagccactagactat 31152630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 31381902 - 31381785
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||| | |||||||  |||| ||||||||||| |||| || || |||| |||||| | ||  |  || |||| ||||| ||||||| ||||||||    
T  31381902 ttttctcttacggtttcttcgttgatgggtggttttgggtcaattcttgacctgaaatcaccccttctcatctttttctctctttttcaatttaaataag 31381803  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||||||||    
T  31381802 tgattttcacatagatct 31381785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 50657873 - 50657922
Alignment:
Q  85 aagtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  50657873 aagtcccgtgagcatagctcagttggtaggacaatgcattattatatgca 50657922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 12265355 - 12265431
Alignment:
Q  282 atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtga-ttttcacatagatct 357  Q
    |||||| |||| |||||| | |||||  || |||| || |||||||||||||||||||||| |||||||||||||||    
T  12265355 atttttgacctgaaatcacccctcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatct 12265431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 18139074 - 18139038
Alignment:
Q  310 tcattttttctctatttcaatctaaataagtgatttt 346  Q
    ||||||| |||||||||||||||||||||||||||||    
T  18139074 tcattttctctctatttcaatctaaataagtgatttt 18139038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 31578088 - 31578128
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  31578088 cacttattcacattataaggtgaattctagccactaggcta 31578128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 37188750 - 37188706
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||    
T  37188750 ttttctctatatttcaatctaaataagtgattttcacatatatct 37188706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 39992906 - 39992946
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  39992906 cacttattcaccttataaggtgaattctagccactaggcta 39992946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 40082323 - 40082215
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| ||| ||| ||||||| |||||||||||||  |  ||   || | | || ||||||||||| ||| ||| ||||||||||||    
T  40082323 gtcccgtgagcataactcagtttgtatgataatgtattattatatgcaggggttgtgattcgaaccctggacatttcacatattcaccttataaggtgaa 40082224  T
Q  186 ttctagcca 194  Q
    |||||||||    
T  40082223 ttctagcca 40082215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 346
Target Start/End: Complemental strand, 49126287 - 49126251
Alignment:
Q  310 tcattttttctctatttcaatctaaataagtgatttt 346  Q
    ||||||| |||||||||||||||||||||||||||||    
T  49126287 tcattttctctctatttcaatctaaataagtgatttt 49126251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 1008226 - 1008265
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacata 352  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  1008226 ttttctctctattttaatctaaataagtgattttcacata 1008265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 12868127 - 12868005
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    |||||| |||||||||||  |||||||||| ||||||||||||||||||  | |||  ||| | |||||| ||||  ||||||| ||| ||||||| |||    
T  12868127 agtcccttgagcataacttagttggtaggacaatgcattattatatgcagtg-ctgaggttcgaatcccgaacatcccacttattcaccttataagatga 12868029  T
Q  185 attctagccactaggctatctaac 208  Q
    | |||||||| |||| || |||||    
T  12868028 actctagccattaggttacctaac 12868005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 359
Target Start/End: Complemental strand, 27594071 - 27593950
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||||||||| || ||| ||||| ||||| ||||  |||| ||||| || | |||||| | |||||  || |||| ||| ||||||||||||||    
T  27594071 taggttttctcttccactt-cttcattgatgggtgattttaggtcaatttttgacatgaaatcacc-ctcttcatctttttctctatatttcaatctaaa 27593974  T
Q  336 taagtgattttcacatagatcttc 359  Q
    |||| || ||||||||||||||||    
T  27593973 taagcgagtttcacatagatcttc 27593950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 52743223 - 52743270
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgca 133  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  52743223 gtcccgtgagcatagctcggttggtaggacaatgcattattatatgca 52743270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 52978738 - 52978777
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacata 352  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  52978738 tttttcctttatttcaatctaaataagtgattttcacata 52978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 49072915 - 49072873
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagat 355  Q
    |||| ||| |||||||||||| |||||||||||||||||||||    
T  49072915 ttttctctttatttcaatctatataagtgattttcacatagat 49072873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 548988 - 548871
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| | | |||||||||| ||||||||||||||||||  | | || ||| | | | | ||||   ||||||| ||| |||||||||||    
T  548988 agtcccgtgagcatagcccagttggtaggacaatgcattattatatgcaggggccggggttcgaaactcagacaccccacttattcaccttataaggtga 548889  T
Q  185 attctagccactaggcta 202  Q
    ||| |||| |||||||||    
T  548888 attttagctactaggcta 548871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 3338894 - 3338833
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatc 301  Q
    ||||||||||||||||||| |||||  |||||||||| ||| |||||| |||| ||||||||    
T  3338894 ttttctcttccagtttcttcattgagaggtggttttgggtcaatttttgacctaaaatcatc 3338833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 21476182 - 21476065
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| ||| |||| ||||||| ||||||||||||||||  |   |  ||| | |  ||||||||  ||||||| ||  |||||| ||||    
T  21476182 agtcccgtgagcatagctcagttgataggatattgcattattatatgcaggggtcgatgttcgaactccggacatcccacttattcatcttataaagtga 21476083  T
Q  185 attctagccactaggcta 202  Q
    ||||||||||||||||||    
T  21476082 attctagccactaggcta 21476065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Original strand, 35112711 - 35112748
Alignment:
Q  94 gagcataactcgttggtaggataatgcattattatatg 131  Q
    |||||||| | |||||||||||||||||||||||||||    
T  35112711 gagcataattagttggtaggataatgcattattatatg 35112748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 355
Target Start/End: Original strand, 35261132 - 35261165
Alignment:
Q  322 tatttcaatctaaataagtgattttcacatagat 355  Q
    |||| |||||||||||||||||||||||||||||    
T  35261132 tattgcaatctaaataagtgattttcacatagat 35261165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 54304966 - 54304913
Alignment:
Q  149 atcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||| ||||  ||||||| ||  |||||||||||||||||||||||||||||    
T  54304966 atcccgaacatcccacttattcagcttataaggtgaattctagccactaggcta 54304913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 56314832 - 56314877
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatctaa 207  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  56314832 cacttattcacattaaaaggtgaattctagccactaggctacctaa 56314877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 438408 - 438364
Alignment:
Q  156 acatttcacttatccactttataaggtgaattctagccactaggc 200  Q
    ||||| |||||||  ||||||||| ||||||||||||||||||||    
T  438408 acattacacttatttactttataaagtgaattctagccactaggc 438364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 2487370 - 2487398
Alignment:
Q  174 ttataaggtgaattctagccactaggcta 202  Q
    |||||||||||||||||||||||||||||    
T  2487370 ttataaggtgaattctagccactaggcta 2487398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 2624351 - 2624391
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttg 277  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  2624351 taggttttctcttctagtttctttattgaggggtgattttg 2624391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 15021496 - 15021536
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||| ||||||||||||||    
T  15021496 cacttattcaccttataaggtgaattatagccactaggcta 15021536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 27651872 - 27651900
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  27651872 tttcaatctaaataagtgattttcacata 27651900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 28221331 - 28221291
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||||||||||||| |||||||||||    
T  28221331 cacttattcaccttataaggtgaattctaaccactaggcta 28221291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 30152185 - 30152225
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  30152185 cacttattcaccttataaggtgaattctagccaataggcta 30152225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 30295584 - 30295624
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  30295584 cacttattcaccttagaaggtgaattctagccactaggcta 30295624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 30324486 - 30324526
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  30324486 cacttattcaccttagaaggtgaattctagccactaggcta 30324526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 31156244 - 31156204
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||||||| || ||||||||||||||||||||||    
T  31156244 cacttattcactttaaaaagtgaattctagccactaggcta 31156204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 32952904 - 32952860
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||  |||||||||| |||||||||||||||    
T  32952904 ttttctctctatttcaaattaaataagtgtttttcacatagatct 32952860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 36008346 - 36008386
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  36008346 cacttattcaccttataaggtgaattctagccactaagcta 36008386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 36257765 - 36257805
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||||||| || ||||||||||||||||||||||    
T  36257765 cacttattcactttaaaaagtgaattctagccactaggcta 36257805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 49680468 - 49680512
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| |||||||||| ||||||||||||||||||| |||||    
T  49680468 ttttctctttatttcaatccaaataagtgattttcacatggatct 49680512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 52944236 - 52944264
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  52944236 tttcaatctaaataagtgattttcacata 52944264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 8563 - 8683
Alignment:
Q  238 aggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaat 336  Q
    |||||||||||||||||||||| ||||| ||||||||||| || | || ||||| | |||||| | || ||  || |||| |||||||||||||||||||    
T  8563 aggttttctcttccagtttcttcattgaggggtggttttgggttaattcttaacttgaaatcaccccttttcatctttttatctctatttcaatctaaat 8662  T
Q  337 aagtgattttcacatagatct 357  Q
    |||||||||||||||||||||    
T  8663 aagtgattttcacatagatct 8683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 354
Target Start/End: Complemental strand, 362032 - 361913
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||| || || |||| |||||| | ||||   ||  |||||||||||||||||||    
T  362032 ctttaggttttctcttacagtttcttcattgaggggtggttttgagtcaattcttgacctgaaatcacccctctccatc--tttttctctatttcaatct 361935  T
Q  333 aaataagtgattttcacataga 354  Q
    |||||||| |||||||||||||    
T  361934 aaataagtaattttcacataga 361913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 7e-22; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 7241627 - 7241748
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| |||| || ||||||| ||| || | |||||  || |||| ||||||||||||||||||    
T  7241627 taggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccctcttcatctttttctctctatttcaatctaaa 7241726  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  7241727 taagtgactttcacatagatct 7241748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 7246803 - 7246924
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| |||| || ||||||| ||| || | |||||  || |||| ||||||||||||||||||    
T  7246803 taggttttctcttcccgtttcttcattggggggtggttttgggtcaattcttaacctgaaaccacccctcttcatctttttctctctatttcaatctaaa 7246902  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  7246903 taagtgactttcacatagatct 7246924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 7887168 - 7887051
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||||||||||||| || || ||||||||||| ||| ||| || |||| |||||||| ||||| ||| |||  ||||||||| ||||||||||||    
T  7887168 ttttctcttccagtttcttcatcgaggggtggttttgggtccattcttgacctgaaatcatccctcttcgtcttttcctctctattttaatctaaataag 7887069  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||| ||||    
T  7887068 tgattttcacataaatct 7887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 27267095 - 27266974
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| |  |||||||||||||| |||| || || |||| |||||| | |||||  |  |||| ||||||||||||||||||    
T  27267095 taggttttctcttcccgtttcttcaccgaagggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttctctctatttcaatctaaa 27266996  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  27266995 taagtgattttcacatagatct 27266974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 28235434 - 28235551
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||  || |||| |||||| | |||||  || |||| | |||||||| |||||||||||    
T  28235434 ttttctcttccagtttctttattgaggggtggttttgggtcaatcattgacctgaaatcacccctcttcatctttttctttctatttcgatctaaataag 28235533  T
Q  340 tgattttcacatagatct 357  Q
    ||||||||||||||||||    
T  28235534 tgattttcacatagatct 28235551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 30371569 - 30371690
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcatt-tttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||| || |||||| ||||| ||||||||||| |||| | ||| |||| |||||| | |||||  || |||| ||| ||||||||||||||    
T  30371569 taggttttctcttacaatttcttcattgaggggtggttttgggtcaatatttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaa 30371668  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  30371669 taagtgattttcacatagatct 30371690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 238 - 357
Target Start/End: Original strand, 34881556 - 34881675
Alignment:
Q  238 aggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaat 336  Q
    |||||||||||| ||||||||  ||||| |||||||| || |||| || || |||| |||||| |||||||  || |||| |||||||||||||||||||    
T  34881556 aggttttctcttacagtttctccattgaggggtggttctgggtcaattcttgacctgaaatcacctctcttcatc-ttttctctctatttcaatctaaat 34881654  T
Q  337 aagtgattttcacatagatct 357  Q
    |||||||||||||||||||||    
T  34881655 aagtgattttcacatagatct 34881675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 42455475 - 42455372
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggctatc 204  Q
    |||||||||| ||||||||||||||||||  | | |||||| | | |||||||| | ||||||| ||| ||||||||||||||||||||||||||||| |    
T  42455475 gttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacactccacttattcaccttataaggtgaattctagccactaggctacc 42455376  T
Q  205 taac 208  Q
    ||||    
T  42455375 taac 42455372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 18677701 - 18677580
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||| || | ||||||| ||||| ||||||||||| |||| || || | || |||||||| |||||  || |||| ||||||||| ||||||||    
T  18677701 taggttttcttttaccgtttcttcattgaggggtggttttgggtcaattattgatctgaaatcatccctcttcatctttttctctctattttaatctaaa 18677602  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||    
T  18677601 taagtgattttcacatagatct 18677580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 357
Target Start/End: Complemental strand, 36344720 - 36344603
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataag 339  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||| || |||| |||||| | |||||  || |||| ||| ||||||||||||||||||    
T  36344720 ttttctcttccaatttcttcattgaggggtggttttgagtcgattcttgacctaaaatcacccctcttcatctttttctctatatttcaatctaaataag 36344621  T
Q  340 tgattttcacatagatct 357  Q
    | |||||||||| |||||    
T  36344620 ttattttcacatggatct 36344603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 29096403 - 29096292
Alignment:
Q  92 gtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattcta 190  Q
    ||||||||| ||| |||||||||| ||||||||||||||||||  | | |||||| | | ||||||||   ||||||| ||| |||||||||||||||||    
T  29096403 gtgagcatagctcagttggtaggacaatgcattattatatgcaagggccggagttcgaaccccggacaccccacttattcaccttataaggtgaattcta 29096304  T
Q  191 gccactaggcta 202  Q
    ||||||||||||    
T  29096303 gccactaggcta 29096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 357
Target Start/End: Complemental strand, 7150570 - 7150449
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttg-agtcatttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| |||   || |||||||| | | |||||| |||| |||||| | |||||  || |||| ||||||||||||||||||    
T  7150570 taggttttctcttcccgtttcttcattcggggatggttttggattaatttttgacctgaaatcacccctcttcatctttttctctctatttcaatctaaa 7150471  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||||||||||||||    
T  7150470 taagtgactttcacatagatct 7150449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 84 - 202
Target Start/End: Original strand, 33800885 - 33801004
Alignment:
Q  84 caagtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||  | | || ||| | | ||| ||||   ||||||| ||| |||||||||    
T  33800885 caagtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttattcaccttataaggt 33800984  T
Q  183 gaattctagccactaggcta 202  Q
    || ||||||| |||||||||    
T  33800985 gagttctagctactaggcta 33801004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 346
Target Start/End: Original strand, 11767648 - 11767762
Alignment:
Q  234 ctttaggttttctcttcca-gtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatc 331  Q
    ||||||||||||||||||| ||||||| ||||   |||||||||  |||| ||||| |||| ||||||||| ||||  || |||| ||| ||||||||||    
T  11767648 ctttaggttttctcttccaagtttcttcattgtgtggtggttttaggtcaatttttgacctaaaatcatctgtcttcatctttttctctatatttcaatc 11767747  T
Q  332 taaataagtgatttt 346  Q
    |||||||||||||||    
T  11767748 taaataagtgatttt 11767762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 357
Target Start/End: Complemental strand, 43262021 - 43261931
Alignment:
Q  268 ggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| |||||||||| || ||||||| |||||| |  ||||  || |||| ||||||||||||||||||||||||||||||||||||||||    
T  43262021 ggtgattttgagtcaattcttaacctgaaatcacccatcttcatctttttatctctatttcaatctaaataagtgattttcacatagatct 43261931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 357
Target Start/End: Original strand, 6445798 - 6445902
Alignment:
Q  254 tttctttattgaagggtggttttgagtc-atttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacata 352  Q
    |||||||||||| ||||||||||||||| ||||||||| | |||||| |  ||||  || |||| ||||||| | ||| ||||||||||||||| |||||    
T  6445798 tttctttattgaggggtggttttgagtcaatttttaacttaaaatcacccatcttcatcgttttctctctatcttaatttaaataagtgatttttacata 6445897  T
Q  353 gatct 357  Q
    |||||    
T  6445898 gatct 6445902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 20257852 - 20257808
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  20257852 ttttctctctatttcaatctaaataagtgattttcacatagatct 20257808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 20945991 - 20945879
Alignment:
Q  87 gtcccgtgagcataactcg-ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||||  | | || ||| | |  |||||||   ||||||| ||| ||||||||||||    
T  20945991 gtcccgtgagcataactcaattggtaggacaatgcattattatatgcaggggccggggttcgaaatccggacaccccacttattcaccttataaggtgaa 20945892  T
Q  186 ttctagccactag 198  Q
    |||||||||||||    
T  20945891 ttctagccactag 20945879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 30403749 - 30403861
Alignment:
Q  91 cgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattct 189  Q
    |||||||||||||| |||||||||| ||| ||||||||||| ||  | | |||||||| | ||||||||   ||||||| ||| ||||||||||||||||    
T  30403749 cgtgagcataactcagttggtaggacaatacattattatatacaggggccggagtttgaaccccggacaccccacttattcaccttataaggtgaattct 30403848  T
Q  190 agccactaggcta 202  Q
    | |||||| ||||    
T  30403849 aaccactaagcta 30403861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 84 - 202
Target Start/End: Original strand, 33729769 - 33729889
Alignment:
Q  84 caagtcccgtgagcat-aactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataagg 181  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||  | | || ||| | ||| | ||||   ||||||| ||| ||||||||    
T  33729769 caagtcccgtgagcattaactcagttggtaggacaatgcattattatatgcaggggccggggttcgaatctcagacaccccacttattcaccttataagg 33729868  T
Q  182 tgaattctagccactaggcta 202  Q
    ||||||||| |||||||||||    
T  33729869 tgaattctaaccactaggcta 33729889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 10649317 - 10649419
Alignment:
Q  256 tctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataagtgattttcacataga 354  Q
    |||| ||||| ||||| ||||| |||| || || |||| |||||| | |||||  || |||| ||| |||||||||||||||||||||||||||||||||    
T  10649317 tcttcattgaggggtgattttgggtcaattcttgacctgaaatcacccctcttcatctttttctctttatttcaatctaaataagtgattttcacataga 10649416  T
Q  355 tct 357  Q
    |||    
T  10649417 tct 10649419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 26578098 - 26578215
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctc-tctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||||| || |||||||||||| || |||||||  |||| || || |||| |||||| ||| ||||  || |||| ||| |||||||||||||||||    
T  26578098 ttttctcttacaatttctttattgatggatggtttttggtcaattcttgacctgaaatca-ctcatcttcatctttttctctttatttcaatctaaataa 26578196  T
Q  339 gtgattttcacatagatct 357  Q
    |||||||||||||||||||    
T  26578197 gtgattttcacatagatct 26578215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 6014797 - 6014890
Alignment:
Q  109 gtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||||||||||||||||||| |  ||  || ||||| |  |||||||  |||||||| ||  |||||||||||||||||||||||||||||    
T  6014797 gtaggataatgcattattatatgtagggatcggggtttgaactccggacacctcacttattcatcttataaggtgaattctagccactaggcta 6014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 21017706 - 21017587
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccacttt---ataaggt 182  Q
    ||||||||| |||| ||| |||||||||| |||||||||||||||| |  | |||| ||||| | |||||||||  ||||||| ||| ||   |||||||    
T  21017706 gtcccgtgaacatagctcagttggtaggacaatgcattattatatgtagtggctggggtttgaaccccggacatcccacttattcaccttataataaggt 21017607  T
Q  183 gaattctagccactaggcta 202  Q
    |||||||||||| |||||||    
T  21017606 gaattctagccagtaggcta 21017587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 27219664 - 27219547
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| ||  |||||||||| ||||||||||||||||||| | | || |||   | |||| |||   ||||||| ||| | |||||||||    
T  27219664 agtcccgtgagcatagcttagttggtaggacaatgcattattatatgcatgggccggggttcaaaccccgtacaccccacttattcacctaataaggtga 27219565  T
Q  185 attctagccactaggcta 202  Q
    ||||||||||||||||||    
T  27219564 attctagccactaggcta 27219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 1697016 - 1696980
Alignment:
Q  321 ctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||||||||||||||||||||||||||||||||||||    
T  1697016 ctatttcaatctaaataagtgattttcacatagatct 1696980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 2057996 - 2057952
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  2057996 ttttctctttatttcaatctaaataagtgattttcacatagatct 2057952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 198
Target Start/End: Complemental strand, 19059104 - 19058992
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| |||||||||| |||||||||| |||||||  | | || ||| | | || |||||   ||||||| ||| ||||||||||||    
T  19059104 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatgcaggggccggggttcgaaccctggacaccccacttattcaccttataaggtgaa 19059005  T
Q  186 ttctagccactag 198  Q
    |||||||||||||    
T  19059004 ttctagccactag 19058992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 30298130 - 30298174
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  30298130 ttttctctatatttcaatctaaataagtgattttcacatagatct 30298174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 32158494 - 32158398
Alignment:
Q  106 ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||||| ||||||||||||||||||  | | || ||| | | |||| |||   ||||||| ||| |||||||||||||||||||||||||||||    
T  32158494 ttggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaggcta 32158398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 2029152 - 2029109
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  2029152 cacttattcaccttataaggtgaattctagccactaggctatct 2029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 355
Target Start/End: Complemental strand, 21060516 - 21060397
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||||||||| || || || || ||  |||||||||| |||| || || | || |||||| | |||||  || |||| ||| ||||||||||||||    
T  21060516 taggttttctcttctagatttttcatcgagtggtggttttgggtcaattcttgatctgaaatcaccactcttcatctttttctctatatttcaatctaaa 21060417  T
Q  336 taagtgattttcacatagat 355  Q
    ||||||||||||||||||||    
T  21060416 taagtgattttcacatagat 21060397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 22600035 - 22599988
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  22600035 gtcccgtgagcataactcagttggtaggacaatgcattattatatgca 22599988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 357
Target Start/End: Complemental strand, 35475485 - 35475450
Alignment:
Q  322 tatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||||||||||||||||||||||||||||||||||    
T  35475485 tatttcaatctaaataagtgattttcacatagatct 35475450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 355
Target Start/End: Original strand, 42579809 - 42579844
Alignment:
Q  320 tctatttcaatctaaataagtgattttcacatagat 355  Q
    ||||||||||||||||||||||||||||||||||||    
T  42579809 tctatttcaatctaaataagtgattttcacatagat 42579844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 43166740 - 43166783
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  43166740 cacttattcaccttataaggtgaattctagccactaggctatct 43166783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 357
Target Start/End: Original strand, 16981138 - 16981256
Alignment:
Q  240 gttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaataa 338  Q
    ||||||||||||| |||||| ||||| ||||||| |||  ||| || || |||| ||||||   |||||  |  |||| |||||||||||||||||||||    
T  16981138 gttttctcttccattttcttcattgaggggtggtattggatcaattcttgacctgaaatcactcctcttcatatttttctctctatttcaatctaaataa 16981237  T
Q  339 gtgattttcacatagatct 357  Q
    ||||||| |||||| ||||    
T  16981238 gtgatttacacatatatct 16981256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 350
Target Start/End: Complemental strand, 19281179 - 19281065
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtca-tttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||| ||| ||||||| ||||  ||||||||||| || | ||||| |||  |||||| |  ||||  || |||| ||||||||||||||||||    
T  19281179 taggttttctcatcccgtttcttcattggggggtggttttgggtaaatttttgaccggaaatcacccatcttcatctttttctctctatttcaatctaaa 19281080  T
Q  336 taagtgattttcaca 350  Q
    ||||||| |||||||    
T  19281079 taagtgactttcaca 19281065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 105 - 198
Target Start/End: Complemental strand, 6671867 - 6671774
Alignment:
Q  105 gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactag 198  Q
    |||||||||| ||||||||||||||| || | |   | ||| | || |||||||| |||||||| ||  |||||||||||||||||||||||||    
T  6671867 gttggtaggacaatgcattattatatacagaaatcagggttcgaattccggacatctcacttattcatcttataaggtgaattctagccactag 6671774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 18477997 - 18478114
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    |||| |||||||||| ||| |||||||||| |||||||||||||||||   | | || ||| | | || |||||   ||||||| ||| |||||||||||    
T  18477997 agtctcgtgagcatagctcagttggtaggacaatgcattattatatgctggggccggggttcgaaccctggacaccccacttattcaccttataaggtga 18478096  T
Q  185 attctagccactaggcta 202  Q
    |||||||||| |||||||    
T  18478097 attctagccattaggcta 18478114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 19259971 - 19259926
Alignment:
Q  313 ttttttctctatttcaatctaaataagtga-ttttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||    
T  19259971 ttttctctctatttcaatctaaataagtgatttttcacatagatct 19259926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 27751851 - 27751892
Alignment:
Q  316 tttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||| ||||||||| ||||||||||||||||||||||||||    
T  27751851 tttctatatttcaatataaataagtgattttcacatagatct 27751892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 781311 - 781355
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||    
T  781311 ttttctctatatttcaatctaaataagtgattttcagatagatct 781355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 353
Target Start/End: Complemental strand, 3271566 - 3271526
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatag 353  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  3271566 ttttctctctgtttcaatctaaataagtgattttcacatag 3271526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 392
Target Start/End: Complemental strand, 7613214 - 7613128
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatc-------ttcctcgtgattttgtcatctgagtgtagtggtgtg 392  Q
    |||| ||||| |||||||||||||||||| |||||| |||||||       ||| || |||||||||||||||||||| ||||||||    
T  7613214 ttttctctctgtttcaatctaaataagtgtttttcatatagatctaggtttttcttcatgattttgtcatctgagtgtggtggtgtg 7613128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 9176887 - 9176839
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  9176887 agtcccgtgagcataactcagttggaaggacaatgcattattatatgca 9176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 9577297 - 9577345
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcat 134  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  9577297 gtcccgtgagtataactcagttggtaggacaatgcattattatatgcat 9577345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 9577364 - 9577404
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  9577364 cacttattcaccttataaggtgaattctagccactaggcta 9577404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 27576507 - 27576463
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||    
T  27576507 ttttctctctatttcaatgtaaataagtgatattcacatagatct 27576463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 37986936 - 37986849
Alignment:
Q  117 atgcattattatatgcatagactggagtttgcatcccggacatttcacttatccacttt--ataaggtgaattctagccactaggcta 202  Q
    ||||||||||||||||| ||   |||||||| | |||||||||  ||||||| ||| ||  | |||||||||||||||||||||||||    
T  37986936 atgcattattatatgcagaggtcggagtttgaaccccggacatcccacttattcaccttgaaaaaggtgaattctagccactaggcta 37986849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 42070494 - 42070454
Alignment:
Q  165 ttatccactttataaggtgaattctagccactaggctatct 205  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  42070494 ttattcactttataaggtgaattctagccactagactatct 42070454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 6806675 - 6806624
Alignment:
Q  151 cccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    |||||||| | ||||||| ||| ||||||||||||||||||||| |||||||    
T  6806675 cccggacactccacttattcacattataaggtgaattctagccattaggcta 6806624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 36888193 - 36888146
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  36888193 gtcccgtgagcatatctcagttggtaggacaatgcattattatatgca 36888146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 355
Target Start/End: Original strand, 42432745 - 42432864
Alignment:
Q  237 taggttttctcttccagtttctttattgaaggg-tggttttgagtcatttttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    |||||||| ||||||| ||| |||||||| ||| ||||||| | ||| |||| |    |||||| |||||||| |  |||| ||||||||||||||||||    
T  42432745 taggttttttcttccattttttttattgagggggtggttttcaatcaattttgattcaaaatcacctctctttatatttttctctctatttcaatctaaa 42432844  T
Q  336 taagtgattttcacatagat 355  Q
     |||||| ||||| ||||||    
T  42432845 aaagtgaatttcatatagat 42432864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 10148730 - 10148764
Alignment:
Q  323 atttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||||||||||||||||||||||||||||||    
T  10148730 attttaatctaaataagtgattttcacatagatct 10148764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 10943741 - 10943827
Alignment:
Q  116 aatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||||||||||||||  | | || ||| | | ||||||||   ||||||| ||||||| || ||||||||||||||||||||||    
T  10943741 aatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaaagtgaattctagccactaggcta 10943827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 18872517 - 18872563
Alignment:
Q  88 tcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  18872517 tcccgtgagcatagctcagttggtaggacaatgcattattatatgca 18872563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 42886401 - 42886443
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagat 355  Q
    |||| |||||||||||||| ||||||||| |||||||||||||    
T  42886401 ttttctctctatttcaatcaaaataagtgcttttcacatagat 42886443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 1244751 - 1244714
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactagg 199  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  1244751 cacttattcaccttataaggtgaattctagccactagg 1244714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 21959480 - 21959371
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtga 184  Q
    ||||||||||||||| ||| ||| |||| ||||||||||||| ||||||  | |||||||| | | |||| |||   || |||| ||| |||||||||||    
T  21959480 agtcccgtgagcatagctcagttagtagaataatgcattattttatgcaggggctggagttggaaccccgaacaccccatttattcaccttataaggtga 21959381  T
Q  185 attctagcca 194  Q
    ||| ||||||    
T  21959380 attttagcca 21959371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 35676306 - 35676245
Alignment:
Q  241 ttttctcttccagtttctttattgaagggtggttttgagtc-atttttaaccttaaatcatc 301  Q
    ||||||||| | ||||||| |||||||||||||||||  || ||||||||||| ||||||||    
T  35676306 ttttctcttactgtttcttcattgaagggtggttttggatcaatttttaacctaaaatcatc 35676245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 1582279 - 1582235
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| |||| |||| |||||||||||||||||||||| |||||||    
T  1582279 ttttctctccattttaatctaaataagtgattttcacgtagatct 1582235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 1602536 - 1602580
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| |||| |||| |||||||||||||||||||||| |||||||    
T  1602536 ttttctctccattttaatctaaataagtgattttcacgtagatct 1602580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 2979497 - 2979469
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  2979497 tttcaatctaaataagtgattttcacata 2979469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 14211134 - 14211162
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  14211134 tttcaatctaaataagtgattttcacata 14211162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 28541097 - 28541069
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  28541097 tttcaatctaaataagtgattttcacata 28541069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 29329017 - 29329065
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    ||||||||||||||| ||| ||||||| ||||||||||||| |||||||    
T  29329017 agtcccgtgagcatagctcagttggtaagataatgcattatcatatgca 29329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 29331326 - 29331354
Alignment:
Q  174 ttataaggtgaattctagccactaggcta 202  Q
    |||||||||||||||||||||||||||||    
T  29331326 ttataaggtgaattctagccactaggcta 29331354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 208
Target Start/End: Original strand, 31556909 - 31556937
Alignment:
Q  180 ggtgaattctagccactaggctatctaac 208  Q
    |||||||||||||||||||||||||||||    
T  31556909 ggtgaattctagccactaggctatctaac 31556937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 31934972 - 31934928
Alignment:
Q  90 ccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||    
T  31934972 ccgtgaacataactcagttggtaggacaatgcattattatatgca 31934928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 35631848 - 35631804
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    ||||| || ||||||||||||||||||||||||| ||||| ||||    
T  35631848 tttttcctatatttcaatctaaataagtgatttttacatatatct 35631804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 38618705 - 38618665
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggcta 202  Q
    ||||||| ||| ||||||||||||||||||| |||||||||    
T  38618705 cacttattcaccttataaggtgaattctagcaactaggcta 38618665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 39567199 - 39567227
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  39567199 tttcaatctaaataagtgattttcacata 39567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 42801542 - 42801494
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||||||| |||| ||| ||||||| |||||||||||||||||||||    
T  42801542 agtcccgtgatcatagctcagttggtatgataatgcattattatatgca 42801494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 2483 - 2595
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| ||  || |||||| | ||||||||   ||||||| ||| ||||||||||||    
T  2483 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttattcaccttataaggtgaa 2582  T
Q  186 ttctagccactag 198  Q
    ||| |||||||||    
T  2583 ttccagccactag 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 234 - 351
Target Start/End: Original strand, 6178 - 6295
Alignment:
Q  234 ctttaggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatct 332  Q
    |||||||||||||||||||||||||| ||||| |||||||||   |||| || || |||| |||||| | |||||  || ||||||||||||| ||||||    
T  6178 ctttaggttttctcttccagtttcttcattga-gggtggtttcaggtcaattcttgacctaaaatcacccctcttcatctttttttctctattccaatct 6276  T
Q  333 aaataagtgattttcacat 351  Q
    |||||||||||||||||||    
T  6277 aaataagtgattttcacat 6295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 909 - 1001
Alignment:
Q  106 ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactag 198  Q
    ||||||||| ||||||||||||||||||  | |||| ||| | ||||| ||||   ||||||| ||| |||||||||||||||||||||||||    
T  909 ttggtaggacaatgcattattatatgcaggggctggggttcgaatcccagacaccccacttattcaccttataaggtgaattctagccactag 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 47397 - 47305
Alignment:
Q  106 ttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattctagccactag 198  Q
    ||||||||| ||||||||||||||||||  | |||| ||| | ||||| ||||   ||||||| ||| |||||||||||||||||||||||||    
T  47397 ttggtaggacaatgcattattatatgcaggggctggggttcgaatcccagacaccccacttattcaccttataaggtgaattctagccactag 47305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 101826 - 101938
Alignment:
Q  87 gtcccgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaa 185  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||  | | || ||| | | |||  ||||  ||||||| ||| ||||||||||||    
T  101826 gtcccgtgagcatagctcagctggtaggataatgcattattatatgcaggggccggggttcgaaccccaaacatcccacttattcaccttataaggtgaa 101925  T
Q  186 ttctagccactag 198  Q
    |||||||||||||    
T  101926 ttctagccactag 101938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 16475 - 16438
Alignment:
Q  318 tctctatttcaatctaaataagtgattttcacatagat 355  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16475 tctctatttcaatctaaataagtgattttcacatagat 16438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 357
Target Start/End: Complemental strand, 201529 - 201485
Alignment:
Q  313 ttttttctctatttcaatctaaataagtgattttcacatagatct 357  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  201529 ttttctctatatttcaatctaaataagtgattttcacatagatct 201485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 9397 - 9440
Alignment:
Q  162 cacttatccactttataaggtgaattctagccactaggctatct 205  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  9397 cacttattcaccttataaggtgaattctagccactaggctatct 9440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 5241 - 5361
Alignment:
Q  237 taggttttctcttccagtttctttattgaagggtggttttgagtcattt-ttaaccttaaatcatctctctttgtcattttttctctatttcaatctaaa 335  Q
    ||||||||||||||| ||||||| ||||  ||||||||||| |||| || || |||| |||||| | |||||  || || | |||||| |||||||||||    
T  5241 taggttttctcttcccgtttcttcattgg-gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttctctctctacttcaatctaaa 5339  T
Q  336 taagtgattttcacatagatct 357  Q
    ||||||| ||| ||||| ||||    
T  5340 taagtgacttttacatatatct 5361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 207
Target Start/End: Original strand, 4322 - 4439
Alignment:
Q  91 cgtgagcataactc-gttggtaggataatgcattattatatgcatagactggagtttgcatcccggacatttcacttatccactttataaggtgaattct 189  Q
    |||||||||| ||| |||| ||||| ||| ||||||||||||||  |   || ||| | | |||||||| | ||||||| ||||||||||||||||||||    
T  4322 cgtgagcatagctcagttgataggacaatacattattatatgcaggggtcggggttcgaaccccggacactccacttattcactttataaggtgaattct 4421  T
Q  190 agccactaggctatctaa 207  Q
    || |||||| ||| ||||    
T  4422 agacactagactacctaa 4439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 159008 - 159056
Alignment:
Q  86 agtcccgtgagcataactc-gttggtaggataatgcattattatatgca 133  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  159008 agtcccatgagcataactcagttggtaggacaatgcattattatatgca 159056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 352
Target Start/End: Complemental strand, 1859 - 1831
Alignment:
Q  324 tttcaatctaaataagtgattttcacata 352  Q
    |||||||||||||||||||||||||||||    
T  1859 tttcaatctaaataagtgattttcacata 1831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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