View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9937_low_17 (Length: 320)

Name: NF9937_low_17
Description: NF9937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9937_low_17
NF9937_low_17
[»] chr1 (38 HSPs)
chr1 (7-98)||(6771814-6771905)
chr1 (7-98)||(5316703-5316794)
chr1 (7-98)||(14146323-14146414)
chr1 (7-98)||(16140078-16140169)
chr1 (7-98)||(23185450-23185541)
chr1 (7-98)||(3406441-3406532)
chr1 (7-98)||(3440288-3440379)
chr1 (7-98)||(5027572-5027663)
chr1 (7-98)||(44655764-44655855)
chr1 (7-98)||(4971617-4971708)
chr1 (7-98)||(21740936-21741027)
chr1 (7-98)||(50881453-50881544)
chr1 (7-97)||(1366878-1366968)
chr1 (7-90)||(9173030-9173113)
chr1 (7-90)||(9181012-9181095)
chr1 (7-90)||(17168979-17169062)
chr1 (7-90)||(27559660-27559743)
chr1 (1-86)||(19955734-19955819)
chr1 (19-98)||(22865460-22865538)
chr1 (7-98)||(41697136-41697227)
chr1 (6-98)||(6889633-6889725)
chr1 (6-98)||(6891479-6891571)
chr1 (7-86)||(40501801-40501880)
chr1 (7-90)||(51607446-51607530)
chr1 (7-86)||(13913491-13913572)
chr1 (14-90)||(38547043-38547119)
chr1 (7-90)||(33170782-33170865)
chr1 (7-90)||(39134729-39134813)
chr1 (7-84)||(26803971-26804045)
chr1 (7-90)||(45758517-45758600)
chr1 (55-98)||(27906728-27906771)
chr1 (10-49)||(34247066-34247105)
chr1 (7-89)||(38853545-38853627)
chr1 (7-90)||(43235775-43235860)
chr1 (1-90)||(6221695-6221783)
chr1 (9-90)||(35392295-35392375)
chr1 (56-90)||(17322630-17322664)
chr1 (7-76)||(5533335-5533404)
[»] chr7 (33 HSPs)
chr7 (7-98)||(29077232-29077323)
chr7 (7-98)||(8171538-8171629)
chr7 (7-98)||(10955496-10955587)
chr7 (7-98)||(18776765-18776856)
chr7 (8-98)||(12596286-12596376)
chr7 (7-86)||(20091292-20091371)
chr7 (17-98)||(26254015-26254096)
chr7 (18-98)||(33162338-33162418)
chr7 (15-98)||(19692114-19692197)
chr7 (7-90)||(24525692-24525775)
chr7 (7-90)||(10329417-10329500)
chr7 (7-98)||(28749722-28749812)
chr7 (7-86)||(48983855-48983934)
chr7 (7-85)||(9021812-9021890)
chr7 (7-90)||(47984976-47985060)
chr7 (7-98)||(38414875-38414966)
chr7 (1-90)||(8239693-8239782)
chr7 (6-90)||(6765688-6765772)
chr7 (7-86)||(23551081-23551161)
chr7 (7-90)||(23744808-23744891)
chr7 (7-90)||(23859085-23859168)
chr7 (7-90)||(36891590-36891673)
chr7 (33-90)||(2611269-2611326)
chr7 (7-90)||(7398463-7398546)
chr7 (19-90)||(36902931-36903002)
chr7 (1-90)||(12981332-12981421)
chr7 (12-89)||(21763595-21763672)
chr7 (41-90)||(27237430-27237479)
chr7 (19-86)||(18201161-18201228)
chr7 (7-90)||(20153213-20153296)
chr7 (10-49)||(40357414-40357453)
chr7 (56-90)||(12419502-12419536)
chr7 (42-90)||(9014185-9014233)
[»] chr6 (23 HSPs)
chr6 (7-98)||(13727399-13727490)
chr6 (7-98)||(21479509-21479600)
chr6 (7-98)||(19737692-19737783)
chr6 (7-98)||(21280560-21280651)
chr6 (7-98)||(20711720-20711811)
chr6 (7-98)||(24710999-24711090)
chr6 (7-98)||(1155849-1155940)
chr6 (7-98)||(27788688-27788779)
chr6 (7-90)||(33774132-33774215)
chr6 (8-98)||(30832524-30832614)
chr6 (7-90)||(28075798-28075881)
chr6 (9-98)||(34397874-34397963)
chr6 (18-98)||(27314178-27314259)
chr6 (7-90)||(17353969-17354052)
chr6 (238-300)||(31006068-31006130)
chr6 (243-300)||(30937852-30937909)
chr6 (6-90)||(6159452-6159536)
chr6 (7-90)||(2477592-2477675)
chr6 (7-86)||(235236-235317)
chr6 (7-87)||(21183686-21183766)
chr6 (7-90)||(20611805-20611888)
chr6 (1-75)||(4036957-4037031)
chr6 (13-90)||(30121783-30121860)
[»] chr5 (38 HSPs)
chr5 (7-98)||(34756363-34756454)
chr5 (7-98)||(36187876-36187967)
chr5 (8-98)||(15480086-15480176)
chr5 (7-98)||(19523211-19523302)
chr5 (7-98)||(2274902-2274993)
chr5 (7-98)||(27079023-27079114)
chr5 (7-98)||(28822339-28822430)
chr5 (7-98)||(30854341-30854432)
chr5 (1-98)||(16592071-16592168)
chr5 (7-90)||(9364303-9364386)
chr5 (7-98)||(31194609-31194699)
chr5 (7-98)||(38869360-38869451)
chr5 (17-98)||(7338021-7338102)
chr5 (7-90)||(16198799-16198882)
chr5 (7-90)||(16799332-16799415)
chr5 (7-98)||(22986555-22986646)
chr5 (8-90)||(40389541-40389623)
chr5 (7-98)||(23284059-23284150)
chr5 (7-98)||(31881431-31881521)
chr5 (7-85)||(27924094-27924172)
chr5 (1-90)||(1366531-1366620)
chr5 (7-90)||(7670936-7671020)
chr5 (7-90)||(36868881-36868964)
chr5 (7-90)||(10543685-10543768)
chr5 (7-90)||(24395751-24395834)
chr5 (7-90)||(2024647-2024730)
chr5 (7-90)||(2530902-2530985)
chr5 (7-90)||(11242323-11242406)
chr5 (7-90)||(14318390-14318473)
chr5 (11-90)||(26718954-26719033)
chr5 (11-90)||(26988698-26988777)
chr5 (7-90)||(33037792-33037875)
chr5 (7-90)||(34425915-34425998)
chr5 (55-90)||(606214-606249)
chr5 (7-90)||(22648741-22648824)
chr5 (7-90)||(40794332-40794415)
chr5 (8-90)||(10407474-10407556)
chr5 (8-90)||(17344969-17345051)
[»] chr4 (46 HSPs)
chr4 (7-98)||(37514676-37514767)
chr4 (7-98)||(38209590-38209681)
chr4 (7-98)||(54780794-54780885)
chr4 (7-98)||(10978917-10979008)
chr4 (7-98)||(32915402-32915493)
chr4 (7-98)||(34768573-34768664)
chr4 (7-98)||(43455530-43455621)
chr4 (7-90)||(47129004-47129087)
chr4 (7-98)||(48209257-48209348)
chr4 (7-97)||(5128842-5128932)
chr4 (7-98)||(1105549-1105640)
chr4 (7-98)||(32128601-32128692)
chr4 (7-90)||(37777230-37777313)
chr4 (7-90)||(2790748-2790831)
chr4 (7-89)||(13460224-13460306)
chr4 (21-90)||(10428204-10428273)
chr4 (22-98)||(17679432-17679508)
chr4 (7-90)||(34027596-34027679)
chr4 (7-98)||(35779325-35779415)
chr4 (8-90)||(16882402-16882484)
chr4 (30-98)||(51691914-51691982)
chr4 (7-86)||(54083253-54083332)
chr4 (18-98)||(51964736-51964819)
chr4 (7-98)||(19498521-19498610)
chr4 (7-84)||(40089533-40089609)
chr4 (7-98)||(16845038-16845130)
chr4 (7-78)||(4167910-4167981)
chr4 (7-90)||(27112047-27112130)
chr4 (7-90)||(35465124-35465206)
chr4 (8-90)||(52468304-52468386)
chr4 (34-98)||(9578663-9578728)
chr4 (7-90)||(36118465-36118548)
chr4 (7-90)||(36178689-36178772)
chr4 (19-90)||(39655261-39655332)
chr4 (17-98)||(16922328-16922409)
chr4 (9-49)||(23509846-23509886)
chr4 (7-90)||(10042007-10042090)
chr4 (19-90)||(39329399-39329470)
chr4 (55-98)||(55255322-55255365)
chr4 (1-87)||(2135331-2135417)
chr4 (7-84)||(24396951-24397028)
chr4 (7-90)||(37744916-37745000)
chr4 (54-89)||(15735154-15735189)
chr4 (55-90)||(24614018-24614053)
chr4 (55-95)||(23508512-23508553)
chr4 (57-90)||(30507129-30507162)
[»] chr3 (32 HSPs)
chr3 (7-98)||(47467699-47467790)
chr3 (7-98)||(54619203-54619294)
chr3 (7-98)||(42098816-42098907)
chr3 (1-98)||(36716025-36716122)
chr3 (7-90)||(21582786-21582869)
chr3 (7-98)||(38681093-38681184)
chr3 (7-98)||(53149314-53149405)
chr3 (1-90)||(34290644-34290733)
chr3 (7-90)||(3953904-3953987)
chr3 (7-90)||(27078577-27078660)
chr3 (7-90)||(27084374-27084457)
chr3 (7-98)||(43207238-43207328)
chr3 (7-90)||(8073346-8073429)
chr3 (7-98)||(9878687-9878778)
chr3 (7-90)||(44708492-44708575)
chr3 (7-90)||(53506892-53506975)
chr3 (7-90)||(54407166-54407249)
chr3 (7-90)||(37168382-37168465)
chr3 (7-98)||(18372494-18372589)
chr3 (7-96)||(36605980-36606069)
chr3 (14-98)||(50258623-50258708)
chr3 (14-90)||(32319163-32319239)
chr3 (7-86)||(50939245-50939324)
chr3 (6-90)||(8420340-8420424)
chr3 (34-87)||(23641329-23641382)
chr3 (7-63)||(29620423-29620479)
chr3 (7-90)||(28689369-28689452)
chr3 (7-90)||(54574835-54574918)
chr3 (13-90)||(26279563-26279640)
chr3 (7-90)||(25855437-25855519)
chr3 (23-90)||(42453435-42453502)
chr3 (7-90)||(49393105-49393187)
[»] chr2 (26 HSPs)
chr2 (7-98)||(3155228-3155319)
chr2 (1-98)||(7162789-7162886)
chr2 (7-98)||(4505905-4505996)
chr2 (7-98)||(6965018-6965109)
chr2 (8-98)||(3953018-3953108)
chr2 (7-90)||(8907087-8907170)
chr2 (7-98)||(10762565-10762656)
chr2 (7-98)||(12337448-12337539)
chr2 (7-90)||(24410448-24410531)
chr2 (7-98)||(29939862-29939953)
chr2 (12-98)||(34693991-34694077)
chr2 (12-98)||(34716403-34716489)
chr2 (7-90)||(9046040-9046124)
chr2 (7-98)||(26716139-26716231)
chr2 (22-98)||(40636164-40636240)
chr2 (7-90)||(16097019-16097102)
chr2 (11-90)||(24035553-24035632)
chr2 (7-86)||(27506752-27506831)
chr2 (22-98)||(5952717-5952791)
chr2 (13-90)||(13800552-13800630)
chr2 (7-90)||(21665708-21665791)
chr2 (7-90)||(38400809-38400892)
chr2 (1-90)||(28425718-28425807)
chr2 (7-90)||(12134048-12134131)
chr2 (13-87)||(16227379-16227453)
chr2 (58-90)||(22727465-22727497)
[»] chr8 (28 HSPs)
chr8 (7-98)||(5860744-5860835)
chr8 (7-98)||(13534687-13534777)
chr8 (7-98)||(13624227-13624317)
chr8 (7-98)||(30883341-30883432)
chr8 (7-98)||(37430158-37430249)
chr8 (7-98)||(45475829-45475920)
chr8 (7-98)||(2952221-2952312)
chr8 (7-98)||(3048517-3048608)
chr8 (7-98)||(23606629-23606720)
chr8 (7-98)||(23798261-23798352)
chr8 (7-86)||(10917403-10917482)
chr8 (11-90)||(41879197-41879276)
chr8 (7-86)||(42600794-42600873)
chr8 (7-90)||(8102924-8103007)
chr8 (7-98)||(34789862-34789953)
chr8 (7-76)||(5942708-5942777)
chr8 (7-90)||(7944530-7944613)
chr8 (7-90)||(41677181-41677265)
chr8 (7-90)||(5721571-5721654)
chr8 (7-90)||(5973115-5973198)
chr8 (7-90)||(11290196-11290279)
chr8 (7-90)||(15078770-15078853)
chr8 (7-90)||(15167423-15167506)
chr8 (7-90)||(39332413-39332496)
chr8 (55-90)||(8646265-8646300)
chr8 (55-90)||(9108553-9108588)
chr8 (19-90)||(30674411-30674482)
chr8 (55-90)||(34868185-34868220)
[»] scaffold0070 (1 HSPs)
scaffold0070 (7-98)||(1355-1446)
[»] scaffold0039 (1 HSPs)
scaffold0039 (7-90)||(106550-106633)
[»] scaffold1590 (1 HSPs)
scaffold1590 (7-90)||(266-349)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-90)||(173518-173607)
[»] scaffold0012 (1 HSPs)
scaffold0012 (7-90)||(206497-206580)
[»] scaffold0097 (1 HSPs)
scaffold0097 (1-90)||(38931-39020)
[»] scaffold0182 (1 HSPs)
scaffold0182 (8-87)||(24004-24083)
[»] scaffold1320 (1 HSPs)
scaffold1320 (7-90)||(1366-1449)
[»] scaffold0001 (2 HSPs)
scaffold0001 (56-98)||(183121-183163)
scaffold0001 (7-45)||(181931-181969)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-90)||(230867-230950)
[»] scaffold0227 (1 HSPs)
scaffold0227 (55-90)||(16125-16160)


Alignment Details
Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 6771814 - 6771905
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6771814 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 6771905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 5316703 - 5316794
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  5316703 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 5316794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 14146323 - 14146414
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14146323 tatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 14146414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 16140078 - 16140169
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  16140078 tatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaatagaacatcactcttt 16140169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 23185450 - 23185541
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  23185450 tatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 23185541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 3406441 - 3406532
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||   |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3406441 tatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 3406532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 3440379 - 3440288
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||   |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3440379 tatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 3440288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 5027572 - 5027663
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| ||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  5027572 tatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 5027663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 44655764 - 44655855
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||| |||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  44655764 tatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 44655855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 4971708 - 4971617
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||| | | |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||| |||||||    
T  4971708 tatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 4971617  T

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Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 21741027 - 21740936
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| ||||||||||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  21741027 tatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttt 21740936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 50881453 - 50881544
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||| |||||||||||||||||| | ||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  50881453 tatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 50881544  T

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Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 1366968 - 1366878
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctctt 97  Q
    ||||||||||||||||||| || | |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||    
T  1366968 tatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctctt 1366878  T

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Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 9173113 - 9173030
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | | |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  9173113 tatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 9173030  T

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Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 9181095 - 9181012
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | | |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  9181095 tatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 9181012  T

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Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 17168979 - 17169062
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| ||||||||||||||||| | ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  17168979 tatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatataaatagaacat 17169062  T

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Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 27559660 - 27559743
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | ||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||    
T  27559660 tatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacat 27559743  T

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Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19955734 - 19955819
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  19955734 ctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 19955819  T

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Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 22865538 - 22865460
Alignment:
Q  19 attttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22865538 attttcacctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttt 22865460  T

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Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 41697227 - 41697136
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||   |  |||||||||||||||||||||||||||||||||||||||||||    
T  41697227 tatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacatcgctcttt 41697136  T

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Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 6889633 - 6889725
Alignment:
Q  6 atatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||| | |||||||||||||| | ||||||||||||||||   |  ||||||||||||||||||||||||||||||||||| |||||||    
T  6889633 atatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttt 6889725  T

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Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 6891479 - 6891571
Alignment:
Q  6 atatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||| | |||||||||||||| | ||||||||||||||||   |  ||||||||||||||||||||||||||||||||||| |||||||    
T  6891479 atatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctcttt 6891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 40501880 - 40501801
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    ||||||||||||||||| |||| | ||||||||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  40501880 tatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 40501801  T

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Target: chr1; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 51607530 - 51607446
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacag-catcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||| | | |||||||||||||||||| | || ||| |||||||||||||||||||||||||| |||||    
T  51607530 tatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaatataaataaaacat 51607446  T

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Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 13913572 - 13913491
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatata--cagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    |||||||||||||||||||| | | |||||||||||||||||  | ||| ||| ||||||||||||||||||||||||||||    
T  13913572 tatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaatataaataga 13913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 38547119 - 38547043
Alignment:
Q  14 tagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||||| | | |||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  38547119 tagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 38547043  T

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Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 33170782 - 33170865
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||  ||||||||||||||||||||| ||  |||||||||  ||||||||||| |||||| |||||    
T  33170782 tatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacat 33170865  T

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Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 39134813 - 39134729
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatc-ttttaaaaaatataaatagaacat 90  Q
    ||||| ||||| ||| |||||| | ||||||  |||||||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  39134813 tatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacat 39134729  T

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Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 26803971 - 26804045
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaata 84  Q
    ||||||||||| ||||||||||    ||||| |||||||||||  |||||||||||||||||||||||||| ||||||    
T  26803971 tatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaata 26804045  T

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Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 45758517 - 45758600
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| | | ||||   |||||||||| || |||| |||||||||||||||||| ||||||||||||    
T  45758517 tatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacat 45758600  T

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Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 27906771 - 27906728
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  27906771 cttgtatttatcttttaaaaaatataaatggaacattgctcttt 27906728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 34247066 - 34247105
Alignment:
Q  10 acggtagtcattttcacctcttggtgtaccgcatatatac 49  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  34247066 acggtagtcattttcatctcttggtgtaccgcatatatac 34247105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 38853545 - 38853627
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaaca 89  Q
    ||||||||||| |||||||||| | | | |||  |||||||||  || |||||||||||| |||||||||| |||||||||||    
T  38853545 tatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaaca 38853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 43235860 - 43235775
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttt--taaaaaatataaatagaacat 90  Q
    |||||| |||| |||||||||| | |||||||  |||||||||  ||||||||||||||||||   ||||||| ||||||||||||    
T  43235860 tatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacat 43235775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6221695 - 6221783
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| ||||||| || | |||||||| | ||| |||||||| ||||||| |||  ||||||||||||||| |||||| ||||||||||||    
T  6221695 ctcatatatacgataatgattttcacattttgatgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaacat 6221783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 35392295 - 35392375
Alignment:
Q  9 tacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||| |||||||||| | | | |||||||||||||| ||| ||||||||||||  ||||||||| |||||| |||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacat 35392375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 90
Target Start/End: Complemental strand, 17322664 - 17322630
Alignment:
Q  56 ttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||| ||||||||||||||||||||    
T  17322664 ttgtatttatctttaaaaaaatataaatagaacat 17322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 5533335 - 5533404
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaa 76  Q
    ||||||||||| |||||||||| |   |||||  ||||||||| ||| ||||| ||||||||||||||||    
T  5533335 tatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaa 5533404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 29077232 - 29077323
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  29077232 tatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 29077323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 8171629 - 8171538
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  8171629 tatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 8171538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 10955496 - 10955587
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  10955496 tatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacatcgctcttt 10955587  T

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Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 18776856 - 18776765
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  18776856 tatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 18776765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 12596376 - 12596286
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  12596376 atacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaatagaacatcgctcttt 12596286  T

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Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 20091371 - 20091292
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  20091371 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 20091292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 26254015 - 26254096
Alignment:
Q  17 tcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||| || | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 26254096  T

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Target: chr7; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 33162418 - 33162338
Alignment:
Q  18 cattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctcttt 33162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 19692114 - 19692197
Alignment:
Q  15 agtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||| | |||||||||||||||||  ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  19692114 agtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 19692197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 24525775 - 24525692
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||| | | ||||||||||||||| || ||| ||| ||||||||||||||||||||||||||||||||    
T  24525775 tatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatataaatagaacat 24525692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 10329500 - 10329417
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | ||| | || ||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  10329500 tatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 10329417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 28749722 - 28749812
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||| |||||||| |||  ||||||||||||||||| ||| |||||||||||||||| |||||||||||||||| || |||||||    
T  28749722 tatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctcttt 28749812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 48983934 - 48983855
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    ||||||||||| |||||||||| | ||||||||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  48983934 tatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 48983855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 9021890 - 9021812
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatag 85  Q
    ||||||||||| |||||||||| | |||||||||||||||||| |||  |||||||||||||||||||||| |||||||    
T  9021890 tatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 47985060 - 47984976
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaatataaatagaacat 90  Q
    |||||||| ||||||||||||| | |||||||||||||||||| ||| ||| ||||| |||||||| ||||||||||||||||||    
T  47985060 tatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaatagaacat 47984976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 38414966 - 38414875
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||| |||||||||||||||| | |||||||| |||||||||  || ||| |||||||||||||||||||| ||||||||| | |||||||    
T  38414966 tatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatacaaatagaacgttgctcttt 38414875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8239693 - 8239782
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||||||| |||||||||| | | |||||||| ||||||||| |||  || ||||||| ||||||||||||||||||||||||    
T  8239693 ctcatatatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaatataaatagaacat 8239782  T

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Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 6765772 - 6765688
Alignment:
Q  6 atatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||| |||||||||| | | ||||| || |||||||  || ||||||||||||||||||||||| ||||||||||||    
T  6765772 atatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 6765688  T

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Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 23551161 - 23551081
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaatataaataga 86  Q
    |||||||||||||||||||||| | | ||||||||||||||||  || ||| |||||||||||||| ||||||||||||||    
T  23551161 tatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaatataaataga 23551081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 23744808 - 23744891
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| ||||| | || | |||||||||||||||| | ||| ||||||||||||||||||||||| ||| ||||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacat 23744891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 23859085 - 23859168
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| ||||||| || | |||||| ||||||||||| | |  |||||||||||||||||||||| ||||||||||||    
T  23859085 tatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacat 23859168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 36891590 - 36891673
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| | | ||||||| ||||||||| ||  ||||||| ||| |||||||||||||||||||||||    
T  36891590 tatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacat 36891673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 2611326 - 2611269
Alignment:
Q  33 gtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  2611326 gtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 2611269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 7398463 - 7398546
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||| |||||||||| | |||||| | ||||||||  ||| ||||||||||||||| ||||||| ||||||||||||    
T  7398463 tatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacat 7398546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 36903002 - 36902931
Alignment:
Q  19 attttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| | |||||||  |||||||||  |||||||||||||||| ||||||||| ||||||||||||    
T  36903002 attttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacat 36902931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12981332 - 12981421
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||| ||||| |||||||||| |  ||||||||| ||||||  | | ||||||||||||||||||||||  ||||||||||||    
T  12981332 ctcatatatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacat 12981421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 21763672 - 21763595
Alignment:
Q  12 ggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaaca 89  Q
    |||||| |||||||| | |||||||| |||||||||||   |  |||||||||||||||||||||| |||||||||||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaaca 21763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 27237479 - 27237430
Alignment:
Q  41 catatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  27237479 catatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 27237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 18201161 - 18201228
Alignment:
Q  19 attttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    |||||||||  | |||||||| ||||||||  ||||||||||||||| ||||||||||| ||||||||    
T  18201161 attttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaataga 18201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 20153213 - 20153296
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||| ||| ||||||| || | ||| || |||||||||||| ||  |||||||||||||||||||||| |||||| |||||    
T  20153213 tatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacat 20153296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 40357453 - 40357414
Alignment:
Q  10 acggtagtcattttcacctcttggtgtaccgcatatatac 49  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  40357453 acggtagtcattttcatctcttggtgtaccgcatatatac 40357414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 90
Target Start/End: Complemental strand, 12419536 - 12419502
Alignment:
Q  56 ttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| ||||||||||||    
T  12419536 ttgtatttatcttttaaaaaatttaaatagaacat 12419502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 9014233 - 9014185
Alignment:
Q  42 atatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||| ||  |||||||||||||||||||||| |||||| |||||    
T  9014233 atatatacaacacattgtatttatcttttaaaaaatttaaataaaacat 9014185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 4e-35; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 13727490 - 13727399
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  13727490 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 13727399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 21479509 - 21479600
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  21479509 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 21479600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 19737783 - 19737692
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||||    
T  19737783 tatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatataaatagaacattgctcttt 19737692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 21280560 - 21280651
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  21280560 tatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 21280651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 20711811 - 20711720
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  20711811 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 20711720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 24711090 - 24710999
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||||  ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  24711090 tatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcactcttt 24710999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 1155940 - 1155849
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| | |||||||||||||||   || |||||||||||||||||||||||||||||||||||| |||||||    
T  1155940 tatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 1155849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 27788779 - 27788688
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| || |||||||    
T  27788779 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaaaattgctcttt 27788688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 33774132 - 33774215
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||| | | |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33774132 tatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 33774215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 30832614 - 30832524
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  30832614 atacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaatagaacatcgcgcttt 30832524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 28075798 - 28075881
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  28075798 tatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 28075881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 34397874 - 34397963
Alignment:
Q  9 tacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| |||||||||| |||| | ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  34397874 tacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 34397963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 27314259 - 27314178
Alignment:
Q  18 cattttcacctcttggtgtaccgcatatatacagcatcttgtatttatc-ttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||  ||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctcttt 27314178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 17353969 - 17354052
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||| ||||||||||||| | | ||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||    
T  17353969 tatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacat 17354052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 31006130 - 31006068
Alignment:
Q  238 aattcagcacaaacccttttttcatagttgaaccaattccattaatcaaaccaccaacaacat 300  Q
    |||| |||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  31006130 aattaagcacaaacccttttttcatagctgaaccaaatccatttatcaaaccaccaacaacat 31006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 30937909 - 30937852
Alignment:
Q  243 agcacaaacccttttttcatagttgaaccaattccattaatcaaaccaccaacaacat 300  Q
    ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  30937909 agcacaaacccttttttcatagttgaaccaaatcgaataatcaaaccaccaacaacat 30937852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 6159452 - 6159536
Alignment:
Q  6 atatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||| |||| ||||| |   ||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  6159452 atatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacat 6159536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 2477675 - 2477592
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | |||||||| ||||||||||   || ||||||||||||||||||||||| ||||| ||||||    
T  2477675 tatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacat 2477592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 235317 - 235236
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatataca--gcatcttgtatttatcttttaaaaaatataaataga 86  Q
    ||||||||||||||||||| || | ||||||| | ||||||||   ||| ||| ||||||||||||||||||||||||||||    
T  235317 tatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaatataaataga 235236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 21183766 - 21183686
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaa 87  Q
    ||||||||||| ||||||| || | |||||||| |||||||||   |  |||||||||||||||||||||| |||||||||    
T  21183766 tatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 20611805 - 20611888
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| | | |||  || ||||||||  || |||||||||||| |||||||||| ||| ||||||||    
T  20611805 tatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacat 20611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4036957 - 4037031
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaa 75  Q
    |||| |||||||||||| || || |||| | ||||||||  |||||||| ||| ||||||||||||| |||||||    
T  4036957 ctcatatatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 30121783 - 30121860
Alignment:
Q  13 gtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||| |||||||||| | | |||| ||||||||||   || ||||||||||| ||||||||||| |||||| |||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacat 30121860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 4e-35; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 34756454 - 34756363
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  34756454 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 34756363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 36187967 - 36187876
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  36187967 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaatagaacatcgctcttt 36187876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 15480176 - 15480086
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  15480176 atacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatataaatagaacatcggtcttt 15480086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 19523211 - 19523302
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  19523211 tatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacaccgctcttt 19523302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 2274902 - 2274993
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| ||||||| ||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||    
T  2274902 tatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 2274993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 27079023 - 27079114
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||| |||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  27079023 tatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 27079114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 28822430 - 28822339
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  28822430 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 28822339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 30854341 - 30854432
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||| |||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  30854341 tatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 30854432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16592168 - 16592071
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||  || | ||||||||||||||| |||||||||||||||||| |||||||    
T  16592168 ctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatataaatagaacattgctcttt 16592071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 9364303 - 9364386
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  9364303 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 9364386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 31194699 - 31194609
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  31194699 tatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 31194609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 38869451 - 38869360
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||||||||||||| |||||||    
T  38869451 tatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctcttt 38869360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 7338021 - 7338102
Alignment:
Q  17 tcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||| | ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 7338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 16198882 - 16198799
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||| |||||||||||  || ||| ||||||||||||||||||||||||||||||||    
T  16198882 tatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacat 16198799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 16799415 - 16799332
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||| |||||||||||| | |||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||||||||    
T  16799415 tatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatataaatagaacat 16799332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 22986646 - 22986555
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | ||||||||||||||||||  ||  |||||||| ||||||||||||||| |||||||||| |||||||    
T  22986646 tatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgctcttt 22986555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 40389623 - 40389541
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||| | | ||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||    
T  40389623 atacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacat 40389541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 23284150 - 23284059
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||| || | ||||||||||||||||||  || ||||||||||   ||||||||||||||||||||||| |||||||    
T  23284150 tatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattgctcttt 23284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 31881521 - 31881431
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||| ||||||| |||| | ||| |||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||||    
T  31881521 tatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctcttt 31881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 27924094 - 27924172
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatag 85  Q
    ||||||||||||||||| |||| | | |||||||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  27924094 tatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1366620 - 1366531
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||||||||| |||||||| | | |||||| |||||||||||  ||||||||||||||||| |||||||| ||||||||||||    
T  1366620 ctcatatatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacat 1366531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 7670936 - 7671020
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | ||||||||| | |||||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  7670936 tatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaatataaatagaacat 7671020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 36868964 - 36868881
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | | |||||||| |||||||||  || ||||||||||||||||||||||  ||||||||||||    
T  36868964 tatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacat 36868881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 10543685 - 10543768
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| | | |||| |||||||||||| || ||| ||||||||||||||||||| ||| | ||||||    
T  10543685 tatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacat 10543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 24395751 - 24395834
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||| || |||||||||| | | ||||  | ||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  24395751 tatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacat 24395834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 2024730 - 2024647
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||| ||||||| || | |||||| | ||||||||| |||  |||||||||||||| ||||||| ||||||||||||    
T  2024730 tatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacat 2024647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 2530985 - 2530902
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||| ||||| |||||||||| | | ||||||| ||||||||  ||  |||||||||||||||||||||  ||||||||||||    
T  2530985 tatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacat 2530902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 11242406 - 11242323
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||| || || | | |||| | |||||||||| ||| |||||||||||||||||||||  ||||||||||||    
T  11242406 tatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacat 11242323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 14318473 - 14318390
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||  | | | |||| | |||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  14318473 tatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 14318390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 26719033 - 26718954
Alignment:
Q  11 cggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||| |||||||||| |  ||||| |||||||||||  ||  |||||||||||||||||||| | ||||||||||||    
T  26719033 cggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacat 26718954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 26988777 - 26988698
Alignment:
Q  11 cggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||| |||||||||| |  ||||| |||||||||||  ||  |||||||||||||||||||| | ||||||||||||    
T  26988777 cggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacat 26988698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 33037792 - 33037875
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||| |  ||||||||| | |||||||  |||||||||   ||||||||||||||||||||||||| |||||| |||||    
T  33037792 tatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacat 33037875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 34425915 - 34425998
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||| | ||||| | || | |||||| | ||||||||| ||| |||||||||||||||||||||||  |||||||||||    
T  34425915 tatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacat 34425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 606214 - 606249
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||||| ||||||||||||    
T  606214 cttgtatttatcttttaaaaaatttaaatagaacat 606249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 22648824 - 22648741
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||| ||||| ||| |||||| | | ||| || |||||||||  ||  |||||||||||||||||||||| ||||||||||||    
T  22648824 tatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaacat 22648741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 40794415 - 40794332
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| |||||||| |  |||| ||| ||   |||||||| ||||||||||||| |||||| |||||    
T  40794415 tatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacat 40794332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 10407474 - 10407556
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| |||||||| | | | |||||  ||||| |||  || ||||| ||||||||||||||||| ||||||||||||    
T  10407474 atacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacat 10407556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 17344969 - 17345051
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| ||||| | || | ||||||||||||||| |   ||||||||||||||  | |||||||| ||||||||||||    
T  17344969 atacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacat 17345051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 37514676 - 37514767
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37514676 tatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 37514767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 38209681 - 38209590
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  38209681 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 38209590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 54780794 - 54780885
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  54780794 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 54780885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 10978917 - 10979008
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||| ||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  10978917 tatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 10979008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 32915402 - 32915493
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||| ||||||| |||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32915402 tatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 32915493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 34768664 - 34768573
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||| |||||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  34768664 tatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 34768573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 43455621 - 43455530
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  43455621 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 43455530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 47129004 - 47129087
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  47129004 tatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 47129087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 48209257 - 48209348
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||| ||||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  48209257 tatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 48209348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 5128932 - 5128842
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctctt 97  Q
    |||||||||||||||||||||||| |||| || |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  5128932 tatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatatcgctctt 5128842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 1105549 - 1105640
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| ||||||||||||||||||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||| ||||||    
T  1105549 tatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatataaatagaacatcactcttt 1105640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 32128601 - 32128692
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | ||||||||||||||||||  || ||| |||||||||||||||||||||||||||||||| |||||||    
T  32128601 tatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctcttt 32128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 37777313 - 37777230
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  37777313 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 37777230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 2790831 - 2790748
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||||||||||||||| | | ||| ||||||||||||||||||||||||||||||||    
T  2790831 tatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacat 2790748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 13460224 - 13460306
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaaca 89  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  13460224 tatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 10428273 - 10428204
Alignment:
Q  21 tttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  10428273 tttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 10428204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 17679432 - 17679508
Alignment:
Q  22 ttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || |||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctcttt 17679508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 34027596 - 34027679
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||| |||||||||||||||| | ||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||    
T  34027596 tataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacat 34027679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 35779415 - 35779325
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||| |||||||||||| | ||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||| |||||||    
T  35779415 tatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat-aatagaacattgctcttt 35779325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 16882484 - 16882402
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||| ||||||||||| ||||| || ||| ||| ||||||||||||||||| ||||||||||||||    
T  16882484 atacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtataaatagaacat 16882402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 51691982 - 51691914
Alignment:
Q  30 ttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||    
T  51691982 ttggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctcttt 51691914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 54083332 - 54083253
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    ||||||||||||||||| | || | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  54083332 tatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 54083253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 51964736 - 51964819
Alignment:
Q  18 cattttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt---aaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||   |||||||||||||||||||| |||||||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctcttt 51964819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 19498521 - 19498610
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||| |||||||||||||||| | | |||||||||||||  | ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  19498521 tatacagtagtcattttcacctttggctgtaccgcatata--cggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 19498610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 40089533 - 40089609
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaata 84  Q
    |||||||||||||||||||||| | | |||||||||||||||| ||| ||| |||||||||||| |||||||||||||    
T  40089533 tatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatctttt-aaaaatataaata 40089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 16845038 - 16845130
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||  | |||||||  |||||||||  || ||| |||||||||||| |||||||||||||||||||| |||||||    
T  16845038 tatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaatataaatagaacattgctcttt 16845130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 4167981 - 4167910
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaata 78  Q
    |||| |||||| |||||||||| | |||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  4167981 tataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 27112047 - 27112130
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | |||||||| ||||||||||   || ||||||||||||||||||||||| ||||| ||||||    
T  27112047 tatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacat 27112130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 35465124 - 35465206
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | | |||||||||||||||||| ||| ||| |||||||||| ||||||||||||||| |||||    
T  35465124 tatacggtagttattttcacttttaggtgtaccgcatatatac-gcaccttttatttatcttgtaaaaaatataaatataacat 35465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 52468304 - 52468386
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| |||||||||| | | ||||   ||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  52468304 atacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 52468386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 9578728 - 9578663
Alignment:
Q  34 tgtaccgcatatatacagc-atcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||  || | |||||||||||||||||||||||||||||||||||| |||||||    
T  9578728 tgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 9578663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 36118548 - 36118465
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||  | | |||||| | |||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  36118548 tatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 36118465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 36178689 - 36178772
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||| |||||||| | | |||||| |||||||||||  || ||||||||||||||||||| ||| ||||||||||||    
T  36178689 tataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacat 36178772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 39655332 - 39655261
Alignment:
Q  19 attttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| | |||||||||||||||| | | |  |||||||||||||||||||||| ||||||||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacat 39655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 16922409 - 16922328
Alignment:
Q  17 tcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||| | ||  ||| ||||||||||  ||  || |||||||||||||||||||||||||||||||| |||||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctcttt 16922328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 23509886 - 23509846
Alignment:
Q  9 tacggtagtcattttcacctcttggtgtaccgcatatatac 49  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  23509886 tacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 10042090 - 10042007
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | | |||||| | |||| |||| ||| ||||||||||| |||| |||||| ||||||||||||    
T  10042090 tatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacat 10042007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 39329470 - 39329399
Alignment:
Q  19 attttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||| || | |||||| | |||||||||| || ||||||||||||||||||||||| |||| |||||||    
T  39329470 attttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacat 39329399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 55255322 - 55255365
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  55255322 cttgtatttatcttttaaaaaatataaatggaacattgctcttt 55255365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2135417 - 2135331
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaa 87  Q
    |||| ||||||| |||| || || |||| | | |||| |||||||||||  || ||||||||||||||||||||||| |||||||||    
T  2135417 ctcatatatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 2135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 24396951 - 24397028
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaata 84  Q
    |||||| |||| |||||||||| |  ||||| | ||||||||| ||| ||| ||||||||||||||||||| ||||||    
T  24396951 tatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaata 24397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 37745000 - 37744916
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| | | |||| ||||||||| |  || ||| |||||||||||||| ||||| ||||||||||||    
T  37745000 tatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 89
Target Start/End: Original strand, 15735154 - 15735189
Alignment:
Q  54 tcttgtatttatcttttaaaaaatataaatagaaca 89  Q
    |||||||||||||||||||||||| |||||||||||    
T  15735154 tcttgtatttatcttttaaaaaatttaaatagaaca 15735189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 24614018 - 24614053
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacat 24614053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 23508553 - 23508512
Alignment:
Q  55 cttgtatttatcttttaaaaaa-tataaatagaacatcgctc 95  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  23508553 cttgtatttatcttttaaaaaattataaatagaacattgctc 23508512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 30507162 - 30507129
Alignment:
Q  57 tgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||| ||||||||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacat 30507129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 47467699 - 47467790
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47467699 tatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 47467790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 54619294 - 54619203
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  54619294 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 54619203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 42098816 - 42098907
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||||  || |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42098816 tatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 42098907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36716122 - 36716025
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||| |||||||| ||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  36716122 ctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 36716025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 21582786 - 21582869
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  21582786 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaaacat 21582869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 38681184 - 38681093
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| | ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  38681184 tatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 38681093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 53149405 - 53149314
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||| | ||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  53149405 tatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 53149314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34290733 - 34290644
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  34290733 ctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 34290644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 3953987 - 3953904
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||  |||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  3953987 tatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 3953904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 27078660 - 27078577
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  27078660 tatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacat 27078577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 27084457 - 27084374
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  27084457 tatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacat 27084374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 43207328 - 43207238
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  43207328 tatacggtagtcattttcacct-ttgatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 43207238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 8073429 - 8073346
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||| | | ||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  8073429 tatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacat 8073346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 9878778 - 9878687
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||| ||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| || |||||||    
T  9878778 tatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatataaatagaatattgctcttt 9878687  T

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Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 44708492 - 44708575
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | ||||||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  44708492 tatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 44708575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 53506975 - 53506892
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||||||||||||||| | | ||| ||||||||||||||||||||||||||||||||    
T  53506975 tatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacat 53506892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 54407249 - 54407166
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | | |||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  54407249 tatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 54407166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 37168382 - 37168465
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | ||| |||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  37168382 tatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 37168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 18372494 - 18372589
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgc----atatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||||||||  |||||||||    ||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  18372494 tatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 18372589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 36605980 - 36606069
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatc-ttttaaaaaatataaatagaacatcgctct 96  Q
    ||||||||||| ||||||| |||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||    
T  36605980 tatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctct 36606069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 50258708 - 50258623
Alignment:
Q  14 tagtcattttcacc-tcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||| ||  ||||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||||||    
T  50258708 tagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaacatcgctcttt 50258623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 32319239 - 32319163
Alignment:
Q  14 tagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||||||| | ||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||||||    
T  32319239 tagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacat 32319163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 50939324 - 50939245
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    ||||||||||||||||| |||| | ||||||||  |||||||| ||| ||| ||||||||||||||||||||||||||||    
T  50939324 tatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatataaataga 50939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 8420340 - 8420424
Alignment:
Q  6 atatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||| ||| |||||||| | | |||||||  ||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  8420340 atatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 8420424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 23641382 - 23641329
Alignment:
Q  34 tgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaa 87  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 29620479 - 29620423
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtattt 63  Q
    |||||||||||||||||||||||| | | |||||||||||||| ||| |||||||||    
T  29620479 tatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 28689452 - 28689369
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||| ||| |||||||||| | | | || ||||||||||| ||| ||||||||||||||||  ||||| ||||||||||||    
T  28689452 tatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacat 28689369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 54574918 - 54574835
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||| ||||| || | | |||||||||||||||||| | | ||||||||||| |||| |||||| ||||||||||||    
T  54574918 tatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacat 54574835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 26279563 - 26279640
Alignment:
Q  13 gtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||| ||||||| || | ||||||  ||||||||||  || ||| ||||||||||||||||||| ||||||||||||    
T  26279563 gtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacat 26279640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 25855437 - 25855519
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| ||||||| || | |||| ||  |||||||||  || |||||||| |||||||||||||| ||||||||||||    
T  25855437 tatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacat 25855519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 42453435 - 42453502
Alignment:
Q  23 tcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||| | |||||| ||||||||||   || ||||||||||||||||||||||| ||||| ||||||    
T  42453435 tcacctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacat 42453502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 49393105 - 49393187
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| ||||| |||| | |||||||  |||||||||  |  ||||||||||||||||||||||| |||| |||||||    
T  49393105 tatacggtagtaatttttacctttgggtgtaca-catatatacgacgccttgtatttatcttttaaaaaatttaaagagaacat 49393187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 3155228 - 3155319
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  3155228 tatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 3155319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7162789 - 7162886
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| |||||||||||||||||||||||||  || |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7162789 ctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 7162886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 4505905 - 4505996
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  4505905 tatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 4505996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 6965018 - 6965109
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  6965018 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctcttt 6965109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 3953018 - 3953108
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||| |||||||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  3953018 atacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatataaatagaacatcggtcttt 3953108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 8907170 - 8907087
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  8907170 tatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatataaatagaacat 8907087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 10762656 - 10762565
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  10762656 tatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 10762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 12337539 - 12337448
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||| ||||||||   || |||||||||||||||||||||||||||||||||||| |||||||    
T  12337539 tatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 12337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 24410448 - 24410531
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  24410448 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 24410531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 29939953 - 29939862
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | ||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||| |||||||    
T  29939953 tatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatataaatagaacattgctcttt 29939862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 34693991 - 34694077
Alignment:
Q  12 ggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||| |||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 34694077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 34716403 - 34716489
Alignment:
Q  12 ggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||| |||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 34716489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 9046040 - 9046124
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  9046040 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatagaacat 9046124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 26716139 - 26716231
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatctttt-aaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||  ||| ||| |||||||||||| |||||||||||||||||||| |||||||    
T  26716139 tatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatagaacattgctcttt 26716231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 40636164 - 40636240
Alignment:
Q  22 ttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||| ||||||||||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 40636240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 16097019 - 16097102
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||| |||||||||| | |||||||  ||||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  16097019 tataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 16097102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 24035632 - 24035553
Alignment:
Q  11 cggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||| |||||||||| | |||||| ||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  24035632 cggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacat 24035553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 27506831 - 27506752
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    ||||| ||||||||||| |||| | |||||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  27506831 tatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 27506752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 5952791 - 5952717
Alignment:
Q  22 ttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||  ||||||| ||||| |||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctcttt 5952717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 13800630 - 13800552
Alignment:
Q  13 gtagtcattttcacctcttgg-tgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||| |||||||||| |||| |||| ||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  13800630 gtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacat 13800552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 21665791 - 21665708
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | ||| |||| | |||||||||  || | ||||||||||||||||||||| ||||||||||||    
T  21665791 tatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacat 21665708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 38400809 - 38400892
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| |   |||| ||||||||||   || ||||||||||||||||||||||| ||||||||||||    
T  38400809 tatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacat 38400892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 28425807 - 28425718
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| ||||| |||||| |||||||| | | ||||||| ||||||||||  || ||||||||||||||||||||  | ||||||||||||    
T  28425807 ctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacat 28425718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 12134131 - 12134048
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | | |||||| ||||||||||| | | |||||||||||||||||||   | ||||||||||||    
T  12134131 tatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacat 12134048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 16227453 - 16227379
Alignment:
Q  13 gtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaa 87  Q
    ||||| ||||||| || | |||||| | |||||||||  || ||||||||||||||||||||||| |||||||||    
T  16227453 gtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 16227379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 22727497 - 22727465
Alignment:
Q  58 gtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||| ||||||||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacat 22727465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 5860835 - 5860744
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||| ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  5860835 tatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 5860744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 13534777 - 13534687
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  13534777 tatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatataaatagaacattgctcttt 13534687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 13624317 - 13624227
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  13624317 tatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatataaatagaacattgctcttt 13624227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 30883341 - 30883432
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  30883341 tatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaatagaacattgctcttt 30883432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 37430249 - 37430158
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37430249 tatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttt 37430158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 45475829 - 45475920
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  45475829 tatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 45475920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 2952312 - 2952221
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||| |||| |||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||    
T  2952312 tatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctcttt 2952221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 3048608 - 3048517
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| | || |||||||    
T  3048608 tatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagtatattgctcttt 3048517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 23606720 - 23606629
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||| |||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  23606720 tatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 23606629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 23798352 - 23798261
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||| | | |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  23798352 tatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttt 23798261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 10917403 - 10917482
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    |||| ||||||||||||||||| | |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  10917403 tataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 10917482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 41879197 - 41879276
Alignment:
Q  11 cggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||| | | |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  41879197 cggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacat 41879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 42600794 - 42600873
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaataga 86  Q
    |||||||||||||||||||||| | |||||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  42600794 tatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 42600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 8102924 - 8103007
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||| | |||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||||| |||||| |||||    
T  8102924 tatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacat 8103007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 34789953 - 34789862
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||| |||||||||| | |||||||  |||||||||  ||||||||||||||||||||| | || |||||||||||||| |||||    
T  34789953 tatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacatcgttcttt 34789862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 5942708 - 5942777
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaa 76  Q
    ||||||||||| |||||||||| | ||||||||||| ||||||  |||||||||||||||||||||||||    
T  5942708 tatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

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Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 7944613 - 7944530
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| | |||||||  ||||||||| ||| ||||||||||| ||||||||||| |||||| |||||    
T  7944613 tatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacat 7944530  T

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Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 41677265 - 41677181
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaa-aaaatataaatagaacat 90  Q
    ||||| ||||| |||||||||| | | |||| |||||||||||  ||||||||||||||||||||| ||||| ||||||||||||    
T  41677265 tatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacat 41677181  T

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Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 5721571 - 5721654
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | | |||||||||  ||||||  ||| ||||||||||||||||||||||  ||||||||||||    
T  5721571 tatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

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Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 5973198 - 5973115
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||| | ||||||| || | |||||||  |||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  5973198 tatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 5973115  T

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Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 11290196 - 11290279
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| |  ||||||  |||||||||  || ||||||||||||||||||||||| |||||| |||||    
T  11290196 tatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacat 11290279  T

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Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 15078770 - 15078853
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||| |||| |||||||| | | ||||||  |||||||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  15078770 tatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacat 15078853  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 15167506 - 15167423
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||| |||| |||||||| | | |||||| |||||||||||| ||  || ||||||||||||||||||| ||||||||||||    
T  15167506 tatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacat 15167423  T

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Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 39332496 - 39332413
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||| | | |||||||| ||||||   || |||||||||||||||| |||||  ||||||||||||    
T  39332496 tatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacat 39332413  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 8646265 - 8646300
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8646265 cttgtatttatcttttaaaaaatttaaatagaacat 8646300  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 9108553 - 9108588
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||||| ||||||||||||    
T  9108553 cttgtatttatcttttaaaaaatttaaatagaacat 9108588  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 30674482 - 30674411
Alignment:
Q  19 attttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||| |  ||||| |||||||||||  || ||| |||||||||||||||| || ||||||||||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacat 30674411  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Complemental strand, 34868220 - 34868185
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||||| ||||||||||||    
T  34868220 cttgtatttatcttttaaaaaatttaaatagaacat 34868185  T

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Target: scaffold0070 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 1355 - 1446
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||    
T  1355 tatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatataaatagaacagtgctcttt 1446  T

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Target: scaffold0039 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 106550 - 106633
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||||||||||||||||||| | ||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||    
T  106550 tatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacat 106633  T

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Target: scaffold1590 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 349 - 266
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||| | | ||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  349 tatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 266  T

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Target: scaffold0018 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 173607 - 173518
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||| ||||||||||| ||||| |||| | |||||| ||||||||||| | | ||||||||||||||||||||||| ||||||||||||    
T  173607 ctcacgtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacat 173518  T

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Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 206580 - 206497
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||| |||||||||  | ||||||||||||||||||  || ||||||||||||||||| ||||| ||||||||||||    
T  206580 tatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacat 206497  T

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Target: scaffold0097 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38931 - 39020
Alignment:
Q  1 ctcacatatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||||||||| |||||||| | |  ||||| |||||||||||  || ||||||||||||||||||||||| ||||||||||||    
T  38931 ctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacat 39020  T

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Target: scaffold0182 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 24083 - 24004
Alignment:
Q  8 atacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaa 87  Q
    |||||||| | |||||||| | | ||||||||||||||||||  || ||||||||||||||||||||||| |||||||||    
T  24083 atacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 24004  T

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Target: scaffold1320 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 1366 - 1449
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||||| |||| |||||||| | | ||||||  |||||||||||||| ||| ||||||||||||||||| | ||||||||||||    
T  1366 tatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacat 1449  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 183121 - 183163
Alignment:
Q  56 ttgtatttatcttttaaaaaatataaatagaacatcgctcttt 98  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  183121 ttgtatttatcttttaaaaaatataaatagaacatctctcttt 183163  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 181931 - 181969
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatat 45  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  181931 tatacggtagtcattttcacctctggatgtaccgcatat 181969  T

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Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 230950 - 230867
Alignment:
Q  7 tatacggtagtcattttcacctcttggtgtaccgcatatatacagcatcttgtatttatcttttaaaaaatataaatagaacat 90  Q
    |||| |||||| |||||||||| | ||| || |||||||||||| || |||  ||||||||||||| |||| ||||||||||||    
T  230950 tataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacat 230867  T

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Target: scaffold0227 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 16125 - 16160
Alignment:
Q  55 cttgtatttatcttttaaaaaatataaatagaacat 90  Q
    ||||||||||||||||||||||| ||||||||||||    
T  16125 cttgtatttatcttttaaaaaatttaaatagaacat 16160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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