View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9937_low_30 (Length: 231)

Name: NF9937_low_30
Description: NF9937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9937_low_30
NF9937_low_30
[»] scaffold0056 (1 HSPs)
scaffold0056 (71-221)||(18217-18367)
[»] chr8 (38 HSPs)
chr8 (79-221)||(36732372-36732514)
chr8 (71-219)||(21514633-21514781)
chr8 (71-219)||(4380579-4380727)
chr8 (71-181)||(18816295-18816405)
chr8 (76-194)||(22208216-22208334)
chr8 (16-182)||(21676592-21676757)
chr8 (31-182)||(21678845-21678995)
chr8 (76-182)||(12577826-12577932)
chr8 (70-182)||(21399657-21399770)
chr8 (70-182)||(21794150-21794263)
chr8 (85-194)||(22258293-22258403)
chr8 (70-194)||(18834366-18834487)
chr8 (26-182)||(22610266-22610422)
chr8 (26-131)||(21697509-21697615)
chr8 (26-133)||(22966707-22966815)
chr8 (118-177)||(22483775-22483834)
chr8 (151-221)||(5761555-5761625)
chr8 (76-221)||(17978376-17978520)
chr8 (118-192)||(22345153-22345227)
chr8 (118-192)||(22356813-22356887)
chr8 (16-136)||(20879359-20879480)
chr8 (26-194)||(36305900-36306062)
chr8 (94-182)||(21676499-21676585)
chr8 (75-191)||(23884116-23884231)
chr8 (105-164)||(18023573-18023632)
chr8 (76-218)||(22474704-22474845)
chr8 (109-164)||(38184929-38184984)
chr8 (103-161)||(22483912-22483970)
chr8 (76-194)||(21579193-21579310)
chr8 (128-228)||(20021994-20022093)
chr8 (85-139)||(12037205-12037260)
chr8 (85-139)||(29762909-29762964)
chr8 (129-187)||(39694271-39694329)
chr8 (129-186)||(23889799-23889856)
chr8 (169-221)||(22317871-22317923)
chr8 (129-221)||(22532092-22532184)
chr8 (129-221)||(22536777-22536869)
chr8 (76-139)||(41680174-41680237)
[»] chr7 (51 HSPs)
chr7 (71-221)||(43745598-43745748)
chr7 (71-221)||(48212687-48212839)
chr7 (71-221)||(4690623-4690773)
chr7 (71-182)||(15575648-15575759)
chr7 (79-194)||(19195562-19195676)
chr7 (75-182)||(47095398-47095505)
chr7 (73-182)||(708428-708537)
chr7 (71-182)||(20252181-20252292)
chr7 (71-182)||(18874664-18874774)
chr7 (70-194)||(58400-58522)
chr7 (31-192)||(8930754-8930918)
chr7 (26-192)||(25943163-25943330)
chr7 (106-186)||(8513748-8513828)
chr7 (26-182)||(36300640-36300796)
chr7 (75-192)||(15700724-15700840)
chr7 (119-192)||(38299738-38299811)
chr7 (106-186)||(8488089-8488169)
chr7 (20-189)||(13315074-13315243)
chr7 (31-141)||(42565872-42565983)
chr7 (76-194)||(43276731-43276848)
chr7 (75-192)||(13744499-13744614)
chr7 (71-144)||(16186855-16186928)
chr7 (26-182)||(33556104-33556262)
chr7 (70-181)||(15720719-15720831)
chr7 (75-182)||(18570592-18570700)
chr7 (124-194)||(19283051-19283121)
chr7 (118-182)||(16250221-16250285)
chr7 (128-182)||(3287743-3287797)
chr7 (16-182)||(33060325-33060491)
chr7 (105-164)||(34958321-34958380)
chr7 (105-160)||(831871-831926)
chr7 (105-160)||(1197051-1197106)
chr7 (129-194)||(12127150-12127215)
chr7 (73-133)||(16496154-16496215)
chr7 (34-192)||(37539352-37539511)
chr7 (129-194)||(44374843-44374908)
chr7 (129-194)||(44383708-44383773)
chr7 (20-69)||(47975004-47975053)
chr7 (76-139)||(9743120-9743183)
chr7 (113-177)||(15700887-15700951)
chr7 (20-63)||(19282936-19282979)
chr7 (76-133)||(15119354-15119411)
chr7 (129-194)||(8851146-8851211)
chr7 (129-194)||(11067468-11067533)
chr7 (129-194)||(12372274-12372339)
chr7 (129-194)||(12465247-12465312)
chr7 (20-69)||(12754778-12754827)
chr7 (129-221)||(24269906-24269999)
chr7 (129-194)||(32433576-32433641)
chr7 (76-139)||(14160897-14160960)
chr7 (76-139)||(14318020-14318083)
[»] chr4 (33 HSPs)
chr4 (71-221)||(26446149-26446299)
chr4 (71-182)||(14631077-14631188)
chr4 (71-221)||(2424347-2424497)
chr4 (71-193)||(25513793-25513915)
chr4 (26-182)||(15239815-15239972)
chr4 (33-221)||(26921469-26921653)
chr4 (88-182)||(16296897-16296991)
chr4 (13-194)||(9638892-9639075)
chr4 (26-182)||(9622383-9622542)
chr4 (79-175)||(35660906-35661002)
chr4 (52-139)||(45314124-45314212)
chr4 (31-141)||(14477533-14477644)
chr4 (76-194)||(33186850-33186968)
chr4 (76-194)||(12424277-12424397)
chr4 (26-133)||(20150722-20150830)
chr4 (70-182)||(55583136-55583249)
chr4 (20-107)||(16296761-16296850)
chr4 (76-221)||(46741147-46741291)
chr4 (76-220)||(12623264-12623407)
chr4 (121-186)||(13847193-13847258)
chr4 (31-141)||(18462924-18463036)
chr4 (118-188)||(10273372-10273442)
chr4 (105-167)||(17142998-17143060)
chr4 (76-220)||(19565879-19566022)
chr4 (105-161)||(15747793-15747849)
chr4 (20-141)||(35660778-35660903)
chr4 (26-83)||(3838027-3838084)
chr4 (13-133)||(13165016-13165137)
chr4 (20-69)||(14549540-14549589)
chr4 (129-194)||(19610324-19610389)
chr4 (129-194)||(25091653-25091718)
chr4 (129-182)||(37019670-37019723)
chr4 (129-193)||(53630462-53630526)
[»] chr1 (36 HSPs)
chr1 (75-221)||(24719471-24719616)
chr1 (71-191)||(28476724-28476844)
chr1 (20-194)||(8306494-8306671)
chr1 (71-192)||(12710809-12710930)
chr1 (16-181)||(22145666-22145835)
chr1 (13-182)||(38056671-38056842)
chr1 (26-182)||(34392662-34392821)
chr1 (98-182)||(50544841-50544925)
chr1 (13-183)||(8275987-8276159)
chr1 (76-194)||(24007212-24007330)
chr1 (26-133)||(40390047-40390155)
chr1 (106-221)||(14792523-14792637)
chr1 (118-192)||(17901783-17901857)
chr1 (16-141)||(21188073-21188199)
chr1 (44-192)||(45499454-45499605)
chr1 (85-220)||(18121559-18121694)
chr1 (70-194)||(20588576-20588703)
chr1 (70-194)||(20593114-20593241)
chr1 (76-141)||(39061268-39061333)
chr1 (103-192)||(6834150-6834239)
chr1 (121-182)||(635003-635064)
chr1 (106-219)||(44892427-44892539)
chr1 (76-219)||(38887049-38887191)
chr1 (118-192)||(35895088-35895162)
chr1 (129-220)||(24723312-24723403)
chr1 (129-226)||(51324504-51324601)
chr1 (76-191)||(20708049-20708163)
chr1 (20-69)||(7052126-7052175)
chr1 (73-133)||(14294858-14294919)
chr1 (73-133)||(51131317-51131378)
chr1 (118-181)||(16401902-16401963)
chr1 (20-63)||(21239162-21239205)
chr1 (129-194)||(16058301-16058366)
chr1 (129-194)||(19676711-19676776)
chr1 (129-194)||(21046036-21046101)
chr1 (106-139)||(21243799-21243832)
[»] chr2 (21 HSPs)
chr2 (66-220)||(23610563-23610717)
chr2 (16-139)||(28652593-28652717)
chr2 (71-182)||(21335265-21335376)
chr2 (71-182)||(21315475-21315586)
chr2 (71-194)||(21369235-21369358)
chr2 (20-194)||(149488-149668)
chr2 (16-141)||(19647120-19647246)
chr2 (16-141)||(45535812-45535938)
chr2 (129-221)||(19201160-19201252)
chr2 (75-182)||(28344987-28345092)
chr2 (23-192)||(23801386-23801559)
chr2 (31-182)||(20005970-20006121)
chr2 (76-141)||(25584302-25584367)
chr2 (26-182)||(34491239-34491401)
chr2 (31-141)||(45528442-45528553)
chr2 (20-69)||(1383765-1383814)
chr2 (129-194)||(17307486-17307551)
chr2 (75-107)||(25584186-25584218)
chr2 (80-182)||(36734450-36734552)
chr2 (169-220)||(18388151-18388202)
chr2 (129-194)||(24780827-24780892)
[»] chr6 (30 HSPs)
chr6 (84-221)||(21683035-21683171)
chr6 (16-139)||(25601371-25601492)
chr6 (72-196)||(20410497-20410619)
chr6 (91-194)||(19825473-19825576)
chr6 (71-183)||(15998831-15998943)
chr6 (73-182)||(18982515-18982625)
chr6 (32-141)||(24506155-24506265)
chr6 (75-192)||(10446162-10446280)
chr6 (26-182)||(1818848-1819005)
chr6 (85-182)||(23658044-23658142)
chr6 (81-192)||(34140445-34140554)
chr6 (76-221)||(7217204-7217347)
chr6 (81-192)||(34153061-34153170)
chr6 (118-192)||(29045260-29045334)
chr6 (106-220)||(18455034-18455147)
chr6 (85-221)||(22557204-22557339)
chr6 (35-136)||(18982317-18982422)
chr6 (16-63)||(29045150-29045197)
chr6 (31-131)||(18459207-18459308)
chr6 (129-221)||(28948575-28948667)
chr6 (76-139)||(31734655-31734718)
chr6 (38-190)||(13285656-13285809)
chr6 (129-194)||(7827972-7828037)
chr6 (129-221)||(19235123-19235216)
chr6 (129-194)||(19655218-19655283)
chr6 (129-194)||(23150274-23150339)
chr6 (129-182)||(27329980-27330033)
chr6 (129-182)||(27390720-27390773)
chr6 (34-140)||(35057448-35057555)
chr6 (76-139)||(23431488-23431551)
[»] chr5 (23 HSPs)
chr5 (71-219)||(660732-660878)
chr5 (71-182)||(18744816-18744927)
chr5 (71-194)||(23199194-23199317)
chr5 (79-182)||(16063701-16063804)
chr5 (71-177)||(1627071-1627178)
chr5 (79-182)||(6551289-6551392)
chr5 (26-194)||(21398631-21398803)
chr5 (70-194)||(32607303-32607428)
chr5 (26-218)||(1626881-1627074)
chr5 (26-133)||(24068126-24068234)
chr5 (32-143)||(21398833-21398948)
chr5 (75-220)||(26749978-26750122)
chr5 (31-136)||(21504040-21504147)
chr5 (106-218)||(14025770-14025881)
chr5 (76-221)||(8833166-8833310)
chr5 (80-182)||(20313226-20313328)
chr5 (20-161)||(31621862-31622008)
chr5 (129-190)||(31622117-31622178)
chr5 (20-69)||(36508856-36508905)
chr5 (129-193)||(21300032-21300096)
chr5 (75-107)||(22111923-22111955)
chr5 (76-139)||(26762350-26762413)
chr5 (73-133)||(36315305-36315366)
[»] scaffold0017 (2 HSPs)
scaffold0017 (52-220)||(26650-26818)
scaffold0017 (31-141)||(23514-23626)
[»] scaffold0516 (2 HSPs)
scaffold0516 (71-219)||(5267-5415)
scaffold0516 (169-219)||(5170-5220)
[»] scaffold1186 (1 HSPs)
scaffold1186 (71-182)||(1962-2073)
[»] scaffold0005 (1 HSPs)
scaffold0005 (71-182)||(186195-186306)
[»] scaffold0878 (1 HSPs)
scaffold0878 (75-192)||(3411-3528)
[»] scaffold0505 (1 HSPs)
scaffold0505 (26-192)||(4832-4999)
[»] chr3 (48 HSPs)
chr3 (71-182)||(17208466-17208577)
chr3 (13-194)||(14641535-14641718)
chr3 (36-194)||(50350803-50350963)
chr3 (73-192)||(29907582-29907702)
chr3 (73-192)||(29948748-29948868)
chr3 (73-192)||(29997902-29998022)
chr3 (75-182)||(14520392-14520499)
chr3 (71-219)||(24547142-24547290)
chr3 (71-221)||(24548914-24549061)
chr3 (16-182)||(3160626-3160792)
chr3 (70-194)||(6159345-6159470)
chr3 (76-186)||(14152394-14152504)
chr3 (26-182)||(3527156-3527311)
chr3 (75-182)||(22841278-22841390)
chr3 (70-181)||(54875474-54875586)
chr3 (70-182)||(2841505-2841618)
chr3 (70-182)||(6156651-6156763)
chr3 (70-181)||(17684835-17684947)
chr3 (70-228)||(14442115-14442273)
chr3 (76-181)||(5215594-5215699)
chr3 (70-181)||(17669698-17669810)
chr3 (16-141)||(48631218-48631344)
chr3 (13-174)||(45803338-45803506)
chr3 (32-141)||(21845691-21845801)
chr3 (106-194)||(15566721-15566809)
chr3 (105-164)||(2247883-2247942)
chr3 (76-161)||(50755274-50755360)
chr3 (103-182)||(12917305-12917384)
chr3 (79-120)||(13520408-13520449)
chr3 (32-182)||(25202036-25202187)
chr3 (76-191)||(6003133-6003247)
chr3 (20-69)||(6805040-6805089)
chr3 (31-135)||(12150993-12151098)
chr3 (31-116)||(12155089-12155178)
chr3 (76-139)||(53646100-53646163)
chr3 (76-139)||(54330348-54330411)
chr3 (128-226)||(11563724-11563821)
chr3 (129-194)||(17044966-17045031)
chr3 (129-194)||(17047126-17047191)
chr3 (129-194)||(17518860-17518925)
chr3 (129-194)||(17533722-17533787)
chr3 (129-194)||(22306570-22306635)
chr3 (32-182)||(48043477-48043628)
chr3 (129-194)||(49900730-49900795)
chr3 (75-107)||(13522353-13522385)
chr3 (16-56)||(13522474-13522514)
chr3 (118-186)||(16050916-16050984)
chr3 (129-193)||(17541434-17541498)
[»] scaffold0676 (2 HSPs)
scaffold0676 (79-193)||(2831-2945)
scaffold0676 (20-141)||(2704-2828)
[»] scaffold0261 (1 HSPs)
scaffold0261 (40-221)||(6380-6560)
[»] scaffold0125 (1 HSPs)
scaffold0125 (32-141)||(28454-28564)
[»] scaffold1256 (1 HSPs)
scaffold1256 (94-219)||(2162-2287)
[»] scaffold0203 (1 HSPs)
scaffold0203 (71-194)||(17927-18050)
[»] scaffold0007 (5 HSPs)
scaffold0007 (20-219)||(16380-16584)
scaffold0007 (20-221)||(18660-18867)
scaffold0007 (35-136)||(18902-19007)
scaffold0007 (40-136)||(16619-16718)
scaffold0007 (169-221)||(158782-158834)
[»] scaffold0369 (1 HSPs)
scaffold0369 (71-192)||(15605-15725)
[»] scaffold0247 (1 HSPs)
scaffold0247 (44-181)||(990-1128)
[»] scaffold0231 (1 HSPs)
scaffold0231 (75-182)||(17520-17627)
[»] scaffold0061 (2 HSPs)
scaffold0061 (31-192)||(14575-14737)
scaffold0061 (31-192)||(23633-23795)
[»] scaffold0853 (1 HSPs)
scaffold0853 (71-190)||(2445-2566)
[»] scaffold0220 (1 HSPs)
scaffold0220 (73-182)||(13893-14002)
[»] scaffold0328 (1 HSPs)
scaffold0328 (73-194)||(18627-18749)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-141)||(59695-59821)
[»] scaffold0555 (1 HSPs)
scaffold0555 (75-228)||(8700-8853)
[»] scaffold0213 (2 HSPs)
scaffold0213 (76-194)||(19154-19272)
scaffold0213 (83-128)||(19115-19160)
[»] scaffold0031 (1 HSPs)
scaffold0031 (26-192)||(127332-127501)
[»] scaffold0108 (1 HSPs)
scaffold0108 (106-221)||(6395-6510)
[»] scaffold0032 (1 HSPs)
scaffold0032 (71-194)||(61835-61961)
[»] scaffold0337 (1 HSPs)
scaffold0337 (32-182)||(3107-3257)
[»] scaffold0431 (1 HSPs)
scaffold0431 (76-194)||(5578-5698)
[»] scaffold0174 (3 HSPs)
scaffold0174 (75-194)||(19801-19921)
scaffold0174 (21-192)||(5340-5517)
scaffold0174 (103-194)||(11590-11681)
[»] scaffold0021 (2 HSPs)
scaffold0021 (16-141)||(16993-17118)
scaffold0021 (16-141)||(26524-26649)
[»] scaffold0379 (1 HSPs)
scaffold0379 (75-193)||(10893-11011)
[»] scaffold0120 (1 HSPs)
scaffold0120 (26-133)||(29208-29316)
[»] scaffold0217 (1 HSPs)
scaffold0217 (16-141)||(28600-28726)
[»] scaffold0092 (1 HSPs)
scaffold0092 (31-182)||(38441-38593)
[»] scaffold0162 (1 HSPs)
scaffold0162 (71-131)||(23932-23992)
[»] scaffold0594 (2 HSPs)
scaffold0594 (103-182)||(2221-2300)
scaffold0594 (20-63)||(2130-2173)
[»] scaffold0401 (1 HSPs)
scaffold0401 (106-221)||(8799-8913)
[»] scaffold0098 (1 HSPs)
scaffold0098 (70-182)||(40047-40160)
[»] scaffold0414 (1 HSPs)
scaffold0414 (71-194)||(11147-11271)
[»] scaffold0385 (1 HSPs)
scaffold0385 (76-221)||(293-437)
[»] scaffold0148 (1 HSPs)
scaffold0148 (20-192)||(8731-8907)
[»] scaffold0039 (1 HSPs)
scaffold0039 (109-219)||(9890-9999)
[»] scaffold0004 (6 HSPs)
scaffold0004 (103-192)||(66061-66150)
scaffold0004 (151-220)||(328249-328318)
scaffold0004 (44-190)||(75849-75998)
scaffold0004 (31-190)||(72986-73148)
scaffold0004 (113-182)||(111344-111413)
scaffold0004 (20-56)||(66205-66241)
[»] scaffold0139 (2 HSPs)
scaffold0139 (98-182)||(23503-23587)
scaffold0139 (76-140)||(40204-40268)
[»] scaffold0439 (2 HSPs)
scaffold0439 (76-218)||(4369-4510)
scaffold0439 (75-107)||(12256-12288)
[»] scaffold1939 (1 HSPs)
scaffold1939 (16-136)||(13-135)
[»] scaffold0730 (1 HSPs)
scaffold0730 (21-192)||(6494-6665)
[»] scaffold0394 (1 HSPs)
scaffold0394 (16-182)||(7513-7679)
[»] scaffold0298 (1 HSPs)
scaffold0298 (105-164)||(361-420)
[»] scaffold0086 (3 HSPs)
scaffold0086 (103-182)||(35185-35264)
scaffold0086 (32-177)||(35490-35636)
scaffold0086 (103-177)||(35341-35413)
[»] scaffold1800 (1 HSPs)
scaffold1800 (31-182)||(509-660)
[»] scaffold0035 (2 HSPs)
scaffold0035 (79-182)||(43786-43889)
scaffold0035 (32-182)||(39094-39245)
[»] scaffold0180 (1 HSPs)
scaffold0180 (105-164)||(10572-10630)
[»] scaffold0011 (1 HSPs)
scaffold0011 (76-221)||(33402-33546)
[»] scaffold0462 (4 HSPs)
scaffold0462 (76-125)||(1264-1313)
scaffold0462 (76-125)||(6770-6819)
scaffold0462 (34-128)||(1174-1270)
scaffold0462 (34-128)||(6680-6776)
[»] scaffold0205 (1 HSPs)
scaffold0205 (79-182)||(5615-5718)
[»] scaffold0048 (2 HSPs)
scaffold0048 (169-221)||(57013-57065)
scaffold0048 (118-182)||(68725-68789)
[»] scaffold0165 (1 HSPs)
scaffold0165 (31-137)||(31831-31938)
[»] scaffold0059 (1 HSPs)
scaffold0059 (79-221)||(49680-49822)
[»] scaffold0184 (1 HSPs)
scaffold0184 (73-133)||(377-438)
[»] scaffold0149 (1 HSPs)
scaffold0149 (20-69)||(21430-21479)
[»] scaffold0111 (1 HSPs)
scaffold0111 (129-194)||(12520-12585)
[»] scaffold0026 (2 HSPs)
scaffold0026 (20-69)||(9915-9964)
scaffold0026 (20-69)||(22012-22061)
[»] scaffold0001 (3 HSPs)
scaffold0001 (129-194)||(31994-32059)
scaffold0001 (129-194)||(37301-37366)
scaffold0001 (129-193)||(77687-77751)
[»] scaffold0461 (1 HSPs)
scaffold0461 (26-107)||(12381-12464)
[»] scaffold0020 (2 HSPs)
scaffold0020 (76-139)||(174169-174232)
scaffold0020 (129-181)||(143611-143663)
[»] scaffold1633 (1 HSPs)
scaffold1633 (129-194)||(1205-1270)
[»] scaffold0956 (1 HSPs)
scaffold0956 (129-194)||(2555-2620)
[»] scaffold0112 (1 HSPs)
scaffold0112 (129-182)||(2889-2942)
[»] scaffold0047 (1 HSPs)
scaffold0047 (129-194)||(79049-79114)
[»] scaffold0036 (1 HSPs)
scaffold0036 (129-194)||(78172-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (129-194)||(24118-24183)
[»] scaffold1283 (1 HSPs)
scaffold1283 (129-193)||(456-520)
[»] scaffold0630 (1 HSPs)
scaffold0630 (76-139)||(9011-9074)
[»] scaffold0371 (1 HSPs)
scaffold0371 (76-139)||(10487-10550)
[»] scaffold0145 (1 HSPs)
scaffold0145 (90-133)||(8085-8129)
[»] scaffold0063 (1 HSPs)
scaffold0063 (76-139)||(62666-62729)


Alignment Details
Target: scaffold0056 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 18217 - 18367
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18217 aatctaaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcaca 18316  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18317 cccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctg 18367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 36732514 - 36732372
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 178  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36732514 cctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttacc 36732415  T
Q  179 ttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  36732414 ttaggttagatgatcgcaaggttctaccgctttctcttctctg 36732372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 21514633 - 21514781
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| || ||    
T  21514633 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtccca 21514732  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21514733 cccttaccttaagttagatgatcgcaaggttctaccgctttctcttctc 21514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 4380727 - 4380579
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||    
T  4380727 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtccca 4380628  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 219  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  4380627 cccttaccttaggttagatgatcgcaaggttctacggctttctcttctc 4380579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 71 - 181
Target Start/End: Complemental strand, 18816405 - 18816295
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||    
T  18816405 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtccca 18816306  T
Q  171 cccttacctta 181  Q
    |||||||||||    
T  18816305 cccttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 22208216 - 22208334
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  22208216 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 22208314  T
Q  175 taccttaggttagatgatcg 194  Q
    |||||||| |||||||||||    
T  22208315 taccttagattagatgatcg 22208334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 21676757 - 21676592
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaattcaa-tctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  |||||||||||||||||||||||||| |||  |  |||| || | ||| |||||||||||||| |||||||||| ||||||||||    
T  21676757 acatcaatttttatattaattcattggattacctactctttcaaccttccaattgaaatttaaacctaatttctataatatcaaaactatcaacaactac 21676658  T
Q  115 aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    || |||||||||| ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  21676657 aaagttaaaccctatttcataattata-aacccattattagag-aagctagtcccacccttaccttag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 182
Target Start/End: Complemental strand, 21678995 - 21678845
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    ||||||||||| |||||||||||||| ||| ||  |||| ||||  || ||||||| |||||| |||||||||| |||||||||||| |||||||||| |    
T  21678995 ttaattcattgaattacctactctttcaaccatccaattgcaattcaaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctat 21678896  T
Q  130 ttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||| ||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  21678895 ttcataattata-aacccattattagag-aagctagtcccacccttaccttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 12577826 - 12577932
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaacta-caaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| | |||||||||||||| || || ||||||    
T  12577826 aaccctaatctctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaa-ctattattagagaaagttagtcccaccct 12577924  T
Q  175 taccttag 182  Q
    ||||||||    
T  12577925 taccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 21399657 - 21399770
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| ||    
T  21399657 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 21399755  T
Q  168 acacccttaccttag 182  Q
     ||||||||||||||    
T  21399756 ccacccttaccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 21794150 - 21794263
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| ||    
T  21794150 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 21794248  T
Q  168 acacccttaccttag 182  Q
     ||||||||||||||    
T  21794249 ccacccttaccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 22258403 - 22258293
Alignment:
Q  85 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 183  Q
    ||||| ||||||||||| || |||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||| || |||||||||||||      
T  22258403 ttctacaacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttaccttaaa 22258304  T
Q  184 ttagatgatcg 194  Q
    |||||||||||    
T  22258303 ttagatgatcg 22258293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 18834366 - 18834487
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 169  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||| ||||||||||||||||||| || |    
T  18834366 caatttaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaacccctttt-agaatcatacaatccattattagagaaagctagtccc 18834462  T
Q  170 acccttaccttaggttagatgatcg 194  Q
    ||||||||||||  |||||||||||    
T  18834463 acccttaccttaaattagatgatcg 18834487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 22610422 - 22610266
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaa 123  Q
    |||| |||||||| ||||||||||||||||| |||||| || ||  |||  ||||| ||||||||||||||||||||||||||  || ||  | ||||||    
T  22610422 ttacgttaattcaatggattacctactctttcaacaatcaattttacaaattaaccataatttctataacatcaaaactaaca--aaataacatgttaaa 22610325  T
Q  124 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||| |||| ||||| ||||||| ||||||||||||||| || || ||||||||||||||    
T  22610324 cccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttag 22610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 21697615 - 21697509
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaac 124  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||||| |||  ||||||||||| |||||||    
T  21697615 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatctctttaacatcaaaacctattaacaactacaatgttaaac 21697516  T
Q  125 ccttttt 131  Q
    |||||||    
T  21697515 ccttttt 21697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 22966707 - 22966815
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaac 124  Q
    |||| |||||||| ||  ||||||||||||| |||||||||||||||| ||||||||||  || ||||||||||| |||  |||||||||||||||||||    
T  22966707 ttacgttaattcaatgatttacctactctttcaacaattaaattcaatataaccctaatcgctttaacatcaaaacctattaacaactacaaggttaaac 22966806  T
Q  125 cctttttca 133  Q
    |||||||||    
T  22966807 cctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 5761555 - 5761625
Alignment:
Q  151 attagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  5761555 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgttttctcttctctg 5761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 17978520 - 17978376
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||| |||||||||| |||| | | |  || |||| ||||   || || ||||||    
T  17978520 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaatcctttttcaggattacata-cttatgattatagaagtttagtcccaccct 17978423  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  17978422 taccttagtttagatgatcgcaaggttctaccgctttctcttctctg 17978376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 22345153 - 22345227
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  22345153 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 22345227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 22356813 - 22356887
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  22356813 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 22356887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 20879359 - 20879480
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||| || || |||| |||| |||| || |||||||||||||| |  || ||||||    
T  20879359 acatcaattcttatgttaattcattggattacctacacttttaacaatcaatttgcaatttaacactaacttttataacatcaaaaccattaataactac 20879458  T
Q  115 aaggttaaaccctttttcagaa 136  Q
    ||| ||||||||||||| ||||    
T  20879459 aagcttaaacccttttttagaa 20879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 36305900 - 36306062
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaa 123  Q
    |||| |||||||| ||| ||||||||||||| |||||| || ||  |||  ||||||||||||||||||||        ||||||||| || |  |||||    
T  36305900 ttacgttaattcaatggtttacctactctttcaacaatcaactttgcaaattaaccctaatttctataacaa-------aacaacaacaaccattttaaa 36305992  T
Q  124 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
     ||||||||||||| ||||||||  |||||||||||||||| || |||||||||||||| |||||||||||    
T  36305993 acctttttcagaatcatacaaccg-ttattagagaaagctagtctcacccttaccttagattagatgatcg 36306062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 21676585 - 21676499
Alignment:
Q  94 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattagag-aagctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 23884116 - 23884231
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaaca--actacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    ||||||||||||||||||||||||||||||||| |  || ||| | |||||||| |||| ||||| ||||||||||||  |||||||||||| || | ||    
T  23884116 taaccctaatttctataacatcaaaactaacaaaagaacaacatg-ttaaacccctttttagaatcatacaacccatt--tagagaaagctagtcccgcc 23884212  T
Q  173 cttaccttaggttagatga 191  Q
    |||||||||| ||||||||    
T  23884213 cttaccttagattagatga 23884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 18023632 - 18023573
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 164  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  18023632 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 18023573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 22474704 - 22474845
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || || ||||||    
T  22474704 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccaccct 22474801  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttct 218  Q
    |||||||| ||   |||||||||||| |||||||||||||||||    
T  22474802 taccttagattgattgatcgcaaggttctaccgctttctcttct 22474845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 38184984 - 38184929
Alignment:
Q  109 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 164  Q
    |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  38184984 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 38184929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 22483912 - 22483970
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 161  Q
    ||||||||| || | |||||||||||||| ||||||||||||| |||||||||||||||    
T  22483912 aacaacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaag 22483970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 21579310 - 21579193
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || |||||||||    
T  21579310 aaccctaatt-ctacaacatcaaaacatattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacaccct 21579213  T
Q  175 taccttaggttagatgatcg 194  Q
    |||||||  |||||||||||    
T  21579212 taccttaaattagatgatcg 21579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 20022093 - 20021994
Alignment:
Q  128 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttctc 227  Q
    ||||||||||||||| ||  |  ||||||||||| || || |||||||||||||| ||||||||||| ||| | |||| |  |||||||||||| |||||    
T  20022093 ttttcagaattataccacttagaattagagaaagttagtcccacccttaccttagattagatgatcggaagattctacag-gttctcttctctggttctc 20021995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 12037260 - 12037205
Alignment:
Q  85 ttctataacatcaaaa-ctaacaacaactacaaggttaaaccctttttcagaatta 139  Q
    ||||| |||||||||| |||  ||||||||||||||||||||||||||||| ||||    
T  12037260 ttctacaacatcaaaagctattaacaactacaaggttaaaccctttttcaggatta 12037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 139
Target Start/End: Complemental strand, 29762964 - 29762909
Alignment:
Q  85 ttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaatta 139  Q
    ||||| |||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  29762964 ttctacaacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 29762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 39694329 - 39694271
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttag 187  Q
    ||||||||| |||||||  || |||||||||||||| |||| ||||||| |||||||||    
T  39694329 tttcagaatcatacaacttataattagagaaagctagtcacgcccttacattaggttag 39694271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 23889799 - 23889856
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 186  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||| |||||||||    
T  23889799 tttcagaattatacaacctagaattagagaaagttaatctcacccttagcttaggtta 23889856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22317923 - 22317871
Alignment:
Q  169 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||| ||   |||||||||||| |||||||||||||| |||||    
T  22317923 cacccttaccttagattgattgatcgcaaggttctaccgctttctctcctctg 22317871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 22532184 - 22532092
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   ||||||| |||| ||| || |||||||||||||    
T  22532184 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctg 22532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 22536869 - 22536777
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   ||||||| |||| ||| || |||||||||||||    
T  22536869 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcgaggttctatcgttttctcttctctg 22536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 41680237 - 41680174
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||| |||| ||||    
T  41680237 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttatcaggatta 41680174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 43745598 - 43745748
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || ||    
T  43745598 aatctaactctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtccca 43745697  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43745698 cccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctg 43745748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 48212839 - 48212687
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattca 168  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||  ||||| ||||| |||||||| |||||| |||||||||| |||    
T  48212839 aatctaaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtca 48212740  T
Q  169 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  48212739 cacccttaccttaggttagatgatcgcaaggttctaccactttctcttctctg 48212687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 4690773 - 4690623
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||    
T  4690773 aatctaaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtccca 4690674  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    || ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  4690673 cctttaccttaggttagatgatcgcaaggttctatcgctttctcttctctg 4690623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 15575759 - 15575648
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  15575759 aatctaaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 15575660  T
Q  171 cccttaccttag 182  Q
    ||| ||||||||    
T  15575659 cccctaccttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 19195562 - 19195676
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 178  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| || ||||||||||    
T  19195562 cctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttt-cagaattatacaactcattattagagaaagctagtcccacccttacc 19195660  T
Q  179 ttaggttagatgatcg 194  Q
    |||| |||||||||||    
T  19195661 ttagattagatgatcg 19195676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 47095398 - 47095505
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||||    
T  47095398 taaccctaatttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccaccct 47095497  T
Q  175 taccttag 182  Q
    ||||||||    
T  47095498 taccttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 708537 - 708428
Alignment:
Q  73 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  708537 tctaaacctaattcctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacc 708438  T
Q  173 cttaccttag 182  Q
    | ||||||||    
T  708437 cctaccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 20252292 - 20252181
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||  |    
T  20252292 aatctaatcctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtccta 20252193  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  20252192 cccttaccttag 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 18874774 - 18874664
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccc--tttttcagaattatacaacccattattagagaaagctattca 168  Q
    ||||||||||||||||||||||||||||||||| ||||   |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||     
T  18874774 aatctaaccctaatttctataacatcaaaactaccaac---tacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtct 18874678  T
Q  169 cacccttaccttag 182  Q
    ||||||||||||||    
T  18874677 cacccttaccttag 18874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 58522 - 58400
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcac 169  Q
    |||| |||||||||||||| |||||||||||||||||| ||| ||| | |||||||| |||| ||||| |||||||||||||||||||||||||| || |    
T  58522 caatttaaccctaatttctttaacatcaaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacaacccattattagagaaagctagtccc 58425  T
Q  170 acccttaccttaggttagatgatcg 194  Q
    ||||||||||||| |||||||||||    
T  58424 acccttaccttagattagatgatcg 58400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 8930918 - 8930754
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccc 126  Q
    |||||||| ||| ||||||||||||| |||||| || ||  |||  ||||||||||||||||||||||||||||||||| ||| ||||   |||||||||    
T  8930918 ttaattcaatggtttacctactctttcaacaatcaattttgcaaattaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaaccc 8930820  T
Q  127 tttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
     |||| ||||| ||||||||||||||||||||||  || || |||||||||||||| |||||||||    
T  8930819 ctttttagaatcatacaacccattattagagaaatgtagtcccacccttaccttagattagatgat 8930754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 192
Target Start/End: Original strand, 25943163 - 25943330
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaacta-acaacaactacaaggttaa 122  Q
    |||| |||||||| ||| ||||||||||||| |||||| || ||  |||| ||||||||||||||||||||||||||||| | |||||| | || |||||    
T  25943163 ttacattaattcaatggtttacctactctttcaacaatcaattttgcaat-taaccctaatttctataacatcaaaactacaaaacaacga-aatgttaa 25943260  T
Q  123 accctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    |||| |||||| ||  |||||||||||||||||||||||||| || |||||||||||||  |||||||||    
T  25943261 accccttttcaaaaacatacaacccattattagagaaagctagtcccacccttaccttatattagatgat 25943330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 8513828 - 8513748
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 186  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  8513828 aacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggtta 8513748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 36300796 - 36300640
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaa 123  Q
    |||| |||||||| ||||||||||||||||| |||| |||| ||  |||| ||||||||||| ||||| ||||||||||||||| |  ||  | ||||||    
T  36300796 ttacgttaattcaatggattacctactctttcaacagttaattttgcaatttaaccctaattcctatatcatcaaaactaacaaaa--taacatgttaaa 36300699  T
Q  124 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||| |||| ||||| |||||||||||||||||||||||||| || |||| |||||||||    
T  36300698 cccctttttagaatcatacaacccattattagagaaagctagtctcacctttaccttag 36300640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 15700840 - 15700724
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||| ||||  |||||||||||||||||||||||||| |  || |||    
T  15700840 taaccctaatttctataacattaaaactaacaacaactac-atgttaaacccctttttagaaccatacaacccattattagagaaagctagtatcatcct 15700742  T
Q  175 taccttaggttagatgat 192  Q
    |||||||| ||| |||||    
T  15700741 taccttagattatatgat 15700724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 38299738 - 38299811
Alignment:
Q  119 ttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 38299811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 8488169 - 8488089
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 186  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  8488169 aacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggtta 8488089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 13315243 - 13315074
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatttctataacatcaaaactaacaacaactacaag 117  Q
    |||||||| |||||||||||||| ||||||||||||| |||||| || || ||| |  || ||||||||||  |  ||||||| |||||| ||| ||| |    
T  13315243 caattatttccttaattcattgggttacctactctttcaacaatcaattttaatttcaaaacctaatttctcaacaatcaaaattaacaa-aacaacatg 13315145  T
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagat 189  Q
     |||||||| |||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||    
T  13315144 -ttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttagattagat 13315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 42565983 - 42565872
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    ||||||||||||||||| ||| |||| |||||| ||||| |||| ||| ||||| |||||||||| ||||| || ||||||||||||| |||||||||||    
T  42565983 ttaattcattggattacgtacactttcaacaatcaaatttcaatttaaacctaacttctataacaacaaaattatcaacaactacaagattaaacccttt 42565884  T
Q  130 ttcagaattata 141  Q
    ||||||||||||    
T  42565883 ttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 43276848 - 43276731
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || ||||||    
T  43276848 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtcccaccct 43276751  T
Q  175 taccttaggttagatgatcg 194  Q
    |||||||  |||||||||||    
T  43276750 taccttaaattagatgatcg 43276731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 13744614 - 13744499
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    ||||||||||||||||||||| |||| |||||| ||| ||| | |||||||| |||| ||||| ||| |||||||||||||||||||||| || ||||||    
T  13744614 taaccctaatttctataacattaaaaataacaa-aacaacatg-ttaaacccctttttagaatcataaaacccattattagagaaagctagtcccaccct 13744517  T
Q  175 taccttaggttagatgat 192  Q
    |||||||| |||||||||    
T  13744516 taccttagattagatgat 13744499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 16186855 - 16186928
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaa 144  Q
    |||||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||||||||||    
T  16186855 aatctaaccctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattatacaa 16186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 33556262 - 33556104
Alignment:
Q  26 ttaccttaattcattggatt-acctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gtt 120  Q
    |||| |||||||| |||||| ||||||||||| |||||| || ||  |||| ||||||||||||||||||||||||| ||||||| ||| ||||   |||    
T  33556262 ttacgttaattcaatggatttacctactctttcaacaatcaatttttcaat-taaccctaatttctataacatcaaa-ctaacaa-aacaacaacatgtt 33556166  T
Q  121 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||| |||| ||||| |||||||||||||||||||||||||| || |||||||| |||||    
T  33556165 aaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttatcttag 33556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 181
Target Start/End: Original strand, 15720719 - 15720831
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||| ||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||| ||||||||||| ||    
T  15720719 caatttaaccataatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattatgagagaaagctagtc 15720817  T
Q  168 acacccttacctta 181  Q
     |||| ||||||||    
T  15720818 ccacctttacctta 15720831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 18570592 - 18570700
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    ||||| ||| ||||||||||||||||||||||| ||| ||||   ||||||||| |||  |||||  ||||||||||||||||||||||||| || ||||    
T  18570592 taaccataacttctataacatcaaaactaacaa-aacaacaatatgttaaacccctttctagaatcttacaacccattattagagaaagctagtctcacc 18570690  T
Q  173 cttaccttag 182  Q
    ||||||||||    
T  18570691 cttaccttag 18570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 19283051 - 19283121
Alignment:
Q  124 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    ||||||||||||||||||||||||||| |||||||||| || || |||||||||||||  |||||||||||    
T  19283051 ccctttttcagaattatacaacccattcttagagaaagttagtctcacccttaccttaaattagatgatcg 19283121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| || || ||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 3287743 - 3287797
Alignment:
Q  128 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 33060325 - 33060491
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  ||||||| ||||||| ||||| |||| |||||| ||||| ||||  || ||||| |||||| ||||||||| ||  |||||| ||    
T  33060325 acatcaatttttatattaattctttggattgcctacactttcaacaatcaaattgcaattcaaacctaacttctattacatcaaaattataaacaacaac 33060424  T
Q  115 aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||  |||||||||||| ||||||||||  || ||| |||| |||| | || || ||||||||||||||    
T  33060425 aaaattaaacccttttccagaattata-gactcatgattaaagaaggttagtcccacccttaccttag 33060491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 34958321 - 34958380
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 164  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||  |||||||||||||    
T  34958321 caacaactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagcta 34958380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 831926 - 831871
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaa 160  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||  |||||||||    
T  831926 caacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaa 831871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 1197106 - 1197051
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaa 160  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||  |||||||||    
T  1197106 caacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaa 1197051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 12127215 - 12127150
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  12127215 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcg 12127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 16496154 - 16496215
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 133  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  16496154 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 16496215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 192
Target Start/End: Original strand, 37539352 - 37539511
Alignment:
Q  34 attcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttt 131  Q
    |||||||||||||||||| |||| |||||| ||||| ||  ||||| |||||||||  |||||||| || |  ||||||| |||| | ||||| | ||||    
T  37539352 attcattggattacctacactttcaacaatcaaattgaaattctaaacctaatttcattaacatcataa-tttcaacaacaacaatggtaaactcctttt 37539450  T
Q  132 cagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    || ||||||  ||| ||| |||| |||| | || || ||||||||| |||| |||||||||    
T  37539451 cataattatgaaactcatgattatagaatgttagtcccacccttactttagattagatgat 37539511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 44374843 - 44374908
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  44374843 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcg 44374908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 44383708 - 44383773
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  44383708 tttcagaattatacaacttagaattagagaaagttactctcacccttaccttagattagatgatcg 44383773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 47975053 - 47975004
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    |||||||||||||||||||| |||||||||| ||||| |||||| |||||    
T  47975053 caattattaccttaattcatcggattacctaatctttcaacaatcaaatt 47975004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 9743183 - 9743120
Alignment:
Q  76 aaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| |||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  9743183 aaccctaatt-ctacaacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 9743120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 15700951 - 15700887
Alignment:
Q  113 acaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 177  Q
    |||| ||||||||| |||| ||||| ||||||| |||||||||||||||||| || | |||||||    
T  15700951 acaatgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 19282936 - 19282979
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaat 63  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||    
T  19282936 caattattaccttagttcatcggattacctactctttcaacaat 19282979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 15119411 - 15119354
Alignment:
Q  76 aaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaaccctttttca 133  Q
    |||||||||| ||| |||||||||| |||  ||||||||||||||||||||||||||||    
T  15119411 aaccctaatt-ctacaacatcaaaatctattaacaactacaaggttaaaccctttttca 15119354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 8851211 - 8851146
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 8851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 11067468 - 11067533
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  11067468 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 11067533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 12372274 - 12372339
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 12372339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 12465312 - 12465247
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 12465247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 12754827 - 12754778
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    |||||||||| |||||||||  ||||||||||||||| |||||| |||||    
T  12754827 caattattactttaattcatcagattacctactctttcaacaatcaaatt 12754778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 24269999 - 24269906
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctg 221  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| || | ||||  |||||| ||||  |||||||||||||||    
T  24269999 tttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttagattggttgattacaaggttctacaagctttctcttctctg 24269906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 32433641 - 32433576
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  32433641 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 32433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 14160960 - 14160897
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||| ||||||| ||||    
T  14160960 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccccttttcaggatta 14160897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 14318020 - 14318083
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  ||||||| ||||||||||||||||||||| ||||    
T  14318020 aaccctaatt-ctacaacatcaaaacctattaacaactgcaaggttaaaccctttttcaggatta 14318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 26446149 - 26446299
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||  |    
T  26446149 aatctaaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtccta 26446248  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  26446249 cccttactttaggttagatgatcgcaaggttctaccgctctctcttctctg 26446299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 14631077 - 14631188
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  14631077 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctca 14631176  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  14631177 cccttaccttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 2424497 - 2424347
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||  |  ||||||||||| || || ||    
T  2424497 aatcgaaccctaatttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctca 2424398  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  2424397 cccttaccttaggttagatgatcgcaaggttctaacgctttctcttctctg 2424347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 71 - 193
Target Start/End: Original strand, 25513793 - 25513915
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| || ||    
T  25513793 aatctaaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtccca 25513892  T
Q  171 cccttaccttaggttagatgatc 193  Q
    || ||||||||| ||||||||||    
T  25513893 ccattaccttagattagatgatc 25513915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 15239972 - 15239815
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaacta-caaggttaaac 124  Q
    |||| |||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||  ||||||||||    
T  15239972 ttacgttaattcaatggtttacctactttttcaacaattaaattcaatctaaccctaatctctataacctcaaaaccaacgacaactataaaggttaaac 15239873  T
Q  125 cctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||| ||||||||  |||||||||||||||||| || ||||||||||||||    
T  15239872 cctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 26921653 - 26921469
Alignment:
Q  33 aattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaacccttttt 131  Q
    ||||||||||||||||||||    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||    
T  26921653 aattcattggattacctact----taacaattaaattcaatctaaccctaatctctatgacatcaaaactaacaacaactacaaatgttaaacccttttt 26921558  T
Q  132 cagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||| |  ||  || ||||  ||| | || ||  |||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  26921557 cagaattaca-tacttatgattaatgaaggttagtcctacccttaccttaggttagatgatcacaaggttataccgctttctcttctctg 26921469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 16296897 - 16296991
Alignment:
Q  88 tataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  16296897 tataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 194
Target Start/End: Original strand, 9638892 - 9639075
Alignment:
Q  13 tggacatcaattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaa 110  Q
    |||||| ||||||||||| ||||||||  ||||| ||||||||  | |||  || | |||  ||||| ||||||| | | |||||||||| || ||||||    
T  9638892 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaattatcaacaa 9638991  T
Q  111 ctacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || |||||||||||||| |||||| ||||    
T  9638992 ctacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttagattagattatcg 9639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 9622383 - 9622542
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gtta 121  Q
    |||| |||||||| ||||||||||||||||| |||||| || ||  |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||    
T  9622383 ttacgttaattcaatggattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgtta 9622481  T
Q  122 aaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||| |||| ||||| | |||||||||||||||||||||||| || ||||||||||||||    
T  9622482 aacccctttttagaatcagacaacccattattagagaaagctagtcccacccttaccttag 9622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 35660906 - 35661002
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 175  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||    
T  35660906 cctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctt 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 45314212 - 45314124
Alignment:
Q  52 tcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaatta 139  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  45314212 tcttttcacaattaaattcaatctaaccctaatctctataacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 14477533 - 14477644
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    ||||||||||||||||||||| |||| |||||| ||||| |||| ||||||||| ||||||||||||||||||| |||| |||||||| | |||||||||    
T  14477533 ttaattcattggattacctacactttcaacaatcaaatttcaatttaaccctaacttctataacatcaaaactatcaacgactacaagatcaaacccttt 14477632  T
Q  130 ttcagaattata 141  Q
    ||||||||||||    
T  14477633 ttcagaattata 14477644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 33186850 - 33186968
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||     
T  33186850 aaccctaatt-ctacaacatcaaaacctattaacaaccacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccc 33186948  T
Q  175 taccttaggttagatgatcg 194  Q
    |||||||  |||||||||||    
T  33186949 taccttaaattagatgatcg 33186968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 12424397 - 12424277
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaacccttttt--cagaattatacaacccattattagagaaagctattcacacc 172  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||| || ||||    
T  12424397 aaccctaatt-ctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 12424299  T
Q  173 cttaccttaggttagatgatcg 194  Q
    |||||||||  |||||||||||    
T  12424298 cttaccttaaattagatgatcg 12424277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 20150722 - 20150830
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaac 124  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||||| |||  ||||||||||||||||||     
T  20150722 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatctctttaacatcaaaacctattaacaactacaaggttaaat 20150821  T
Q  125 cctttttca 133  Q
    |||||||||    
T  20150822 cctttttca 20150830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 55583136 - 55583249
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| | ||| |||||||||||||||||||||||||| ||    
T  55583136 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttataatcatacaacccattattagagaaagctagtc 55583234  T
Q  168 acacccttaccttag 182  Q
     ||||||||||||||    
T  55583235 ccacccttaccttag 55583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 16296761 - 16296850
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaa 107  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || ||  || ||||||||||||||||||||||||||||||||    
T  16296761 caattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaactaacaa 16296850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 46741147 - 46741291
Alignment:
Q  76 aaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | |    || |||| |||| | || || ||| ||    
T  46741147 aaccctaatt-ctacaacatcaaaaccaattaacaactacaaggttaaaccctttttcaggattacatattt-atgattaaagaaggttagtcccacact 46741244  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  46741245 taccttaggttagatgatcgcaaggttctaccgctttctcttctctg 46741291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 12623264 - 12623407
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | || || |||| |||| | || || ||||||    
T  12623264 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cctatgattaaagaaggttagtcccaccct 12623361  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    |||||||| ||   |||||||||||| |||||||||||||||||||    
T  12623362 taccttagattgattgatcgcaaggttctaccgctttctcttctct 12623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 13847193 - 13847258
Alignment:
Q  121 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 186  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13847193 aaaccattttttagaattatacaacccattattagagaaagctagtctcacccttaccttaggtta 13847258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 18462924 - 18463036
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaattc-aatctaac-cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctt 128  Q
    ||||||||||||||||||||| |||| |||||| |||||  ||| |||  ||||| || ||||||||||||||||  |||||||||||  ||||||||||    
T  18462924 ttaattcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttttataacatcaaaactattaacaactacaaaattaaaccctt 18463023  T
Q  129 tttcagaattata 141  Q
    |||||||||||||    
T  18463024 tttcagaattata 18463036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 10273372 - 10273442
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttaga 188  Q
    |||| |||| |||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||    
T  10273372 gttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattaga 10273442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 17142998 - 17143060
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||  ||||||||||||||||    
T  17142998 caacaactacaatgttaaaccccttttcagaattatacaactcatctttagagaaagctattc 17143060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 19566022 - 19565879
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| |  ||  || |||| |||| | || |  ||||||    
T  19566022 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtaccaccct 19565925  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    |||||||| ||   |||||||||||| |||||||||||||||||||    
T  19565924 taccttagattgattgatcgcaaggttctaccgctttctcttctct 19565879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 15747849 - 15747793
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 161  Q
    |||||||||||| |||||||||||||||||||||||||||| |||  ||||||||||    
T  15747849 caacaactacaatgttaaaccctttttcagaattatacaactcatctttagagaaag 15747793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 35660778 - 35660903
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataa-catcaaaa-ctaacaacaactaca 115  Q
    |||||||||||||| ||||| |||||||||||||| | |||||| || || ||  || ||||||||||||| ||| |||||||| | ||||||||| ||     
T  35660778 caattattaccttacttcatcggattacctactctctcaacaatcaattttaaattcaaaccctaatttctctaatcatcaaaatcaaacaacaacaacc 35660877  T
Q  116 aggttaaaccctttttcagaattata 141  Q
    | |||||||||| || ||||||||||    
T  35660878 atgttaaaccctattccagaattata 35660903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 3838027 - 3838084
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaa 83  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||||| |||||||||    
T  3838027 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaa 3838084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 13165016 - 13165137
Alignment:
Q  13 tggacatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaac 111  Q
    |||||||||||| | |  ||||||||||||||| ||||| |||| |||||| ||||| ||||  ||  |||| |||||||||||||||||||  ||||||    
T  13165016 tggacatcaattttcatgttaattcattggatttcctacactttcaacaatcaaatttcaattaaaatctaacttctataacatcaaaactattaacaac 13165115  T
Q  112 tacaaggttaaaccctttttca 133  Q
    || ||  |||| ||||||||||    
T  13165116 tataaaattaacccctttttca 13165137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 14549540 - 14549589
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    ||||||||||||||||||||  |||||| |||||||| |||||| |||||    
T  14549540 caattattaccttaattcatcagattacatactctttcaacaatcaaatt 14549589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 19610324 - 19610389
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19610324 tttcagaattatacaacttaaaattagagaaagttagtctcacccttaccttaaattagatgatcg 19610389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 25091653 - 25091718
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 25091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 37019670 - 37019723
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||||||||||||||  |  ||||||||||| || |||||||||||||||||    
T  37019670 tttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 53630526 - 53630462
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 193  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 53630462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 24719616 - 24719471
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  24719616 taaccttaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc-caccct 24719518  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  24719517 taccataggttagatgatcgcaaggttctaccgctttctcttctctg 24719471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 71 - 191
Target Start/End: Complemental strand, 28476844 - 28476724
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| || ||    
T  28476844 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtccca 28476745  T
Q  171 cccttaccttaggttagatga 191  Q
    |||||||||||| ||||||||    
T  28476744 cccttaccttagattagatga 28476724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 8306494 - 8306671
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatttctataacatcaaaactaacaacaactacaag 117  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || ||| |  |||||||||||||||||||||||||||||||| ||| ||||     
T  8306494 caattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaactaacaa-aacgacaac 8306592  T
Q  118 --gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
      ||||||||| |||| |||||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||    
T  8306593 atgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactcttaccttagattagatgatcg 8306671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 71 - 192
Target Start/End: Original strand, 12710809 - 12710930
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| || ||    
T  12710809 aatctaaccttaatttctataacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtccca 12710908  T
Q  171 cccttaccttaggttagatgat 192  Q
     | ||||||||| |||||||||    
T  12710909 tctttaccttagattagatgat 12710930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 22145835 - 22145666
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaattcaa---tctaaccctaatttctataa-catcaaaactaacaacaac 111  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||| ||||  |   ||||||| |||||| | ||| | ||||| |||||||||||    
T  22145835 acatcaattattactttaattcattggattacctactccttcaacaattcaattttaatttctaaccttaatttatctaatcctcaaacctaacaacaac 22145736  T
Q  112 tacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||    
T  22145735 tacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 182
Target Start/End: Complemental strand, 38056842 - 38056671
Alignment:
Q  13 tggacatcaattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaa 110  Q
    |||||| ||||||||||| ||||||||  ||||| ||||||||  | |||  || | |||  ||||| ||||||| | | ||||||||||||||||||||    
T  38056842 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaa 38056743  T
Q  111 ctacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||    
T  38056742 ctacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 34392662 - 34392821
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gtta 121  Q
    |||| |||||||| ||||||||||||||||| |||||| || ||  |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||    
T  34392662 ttacgttaattcaatggattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgtta 34392760  T
Q  122 aaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  34392761 aacccctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  98 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 8276159 - 8275987
Alignment:
Q  13 tggacatcaattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaa 110  Q
    |||||| ||||||||||| ||||||||  ||||| ||||||||  | |||  || | |||  ||||| ||||||| | | |||||||||| || ||||||    
T  8276159 tggacaccaattattaccctaattcatcagattatctactcttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaaatatcaacaa 8276060  T
Q  111 ctacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 183  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||||||||||||||||    
T  8276059 ctacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttagg 8275987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 24007330 - 24007212
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||| ||||||||||| || ||||||    
T  24007330 aaccctaatctctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaa-tcattatcagagaaagctagtcccaccct 24007232  T
Q  175 taccttaggttagatgatcg 194  Q
    ||||||||  ||||||||||    
T  24007231 taccttagtatagatgatcg 24007212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 40390047 - 40390155
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaac 124  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||||| |||  |||||||||||||||||||    
T  40390047 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccctaatatctttaacatcaaaacctattaacaactacaaggttaaac 40390146  T
Q  125 cctttttca 133  Q
    |||||||||    
T  40390147 cctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 14792637 - 14792523
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 205  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  14792637 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctac 14792539  T
Q  206 cgctttctcttctctg 221  Q
    ||||||||||||||||    
T  14792538 cgctttctcttctctg 14792523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 17901857 - 17901783
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||    
T  17901857 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 17901783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 21188199 - 21188073
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  ||||||||||||||||||||| |||| |||||| ||||| |||| ||| ||||| ||||||||||||||||||| ||||||||||    
T  21188199 acatcaatttttatattaattcattggattacctacactttcaacaatcaaattgcaatttaaacctaacttctataacatcaaaactatcaacaactac 21188100  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    ||  ||||| ||||| ||| |||||||    
T  21188099 aaaattaaatcctttctcaaaattata 21188073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 192
Target Start/End: Original strand, 45499454 - 45499605
Alignment:
Q  44 ttacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaatta 139  Q
    ||||||||||||| |||||| || ||  |||| ||||||||||||||||||| | ||||||||||| ||| ||||   ||||||||| |||  ||||| |    
T  45499454 ttacctactctttcaacaatcaactttgcaatttaaccctaatttctataacgttaaaactaacaa-aacaacaacatgttaaacccctttatagaatca 45499552  T
Q  140 tacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||| |||||    
T  45499553 tacaacccattattagagaaagctagtctcacccttaccttagattatatgat 45499605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 18121559 - 18121694
Alignment:
Q  85 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 183  Q
    ||||| ||||||||||| ||  |||||||||||||||||| |||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||    
T  18121559 ttctacaacatcaaaacctattaacaactacaaggttaaatcctttttcaggattacata-cttatgattaaagaaggttaatcccacccttaccttagg 18121657  T
Q  184 ttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18121658 ttagatgatcgcaaggttctaccgctttctcttctct 18121694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 20588576 - 20588703
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttc--agaattatacaacccattattagagaaagctat 165  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||   ||||||||||||||   ||||| ||||||||||||||||||||||||||     
T  20588576 caatttaaccctaatttctataacatcaaaactaacaa-aacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaa 20588674  T
Q  166 tcacacccttaccttaggttagatgatcg 194  Q
    || |||||||||||||  || ||||||||    
T  20588675 tcccacccttaccttaaattggatgatcg 20588703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 20593114 - 20593241
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttc--agaattatacaacccattattagagaaagctat 165  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||   ||||||||||||||   ||||| ||||||||||||||||||||||||||     
T  20593114 caatttaaccctaatttctataacatcaaaactaacaa-aacaaaaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaa 20593212  T
Q  166 tcacacccttaccttaggttagatgatcg 194  Q
    || |||||||||||||  || ||||||||    
T  20593213 tcccacccttaccttaaattggatgatcg 20593241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 39061268 - 39061333
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 141  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  39061268 aaccctaaattctataacatcaaaactatcaacaactacaaggttaaaccttttttcagaattata 39061333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 6834150 - 6834239
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||||| |  ||||||| ||||||  ||||||||    
T  6834150 aacaacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgat 6834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 635064 - 635003
Alignment:
Q  121 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| || ||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttag 635003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 44892427 - 44892539
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 205  Q
    |||||||||||||||||| |||||||||  |||| | | |  || |||| |||| | || || |||||||| ||||||||||||||||||||||| ||||    
T  44892427 aacaactacaaggttaaatcctttttcaagattacata-cttatgattaaagaaggttagtcccacccttaacttaggttagatgatcgcaaggttctac 44892525  T
Q  206 cgctttctcttctc 219  Q
    ||||||||||||||    
T  44892526 cgctttctcttctc 44892539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 38887191 - 38887049
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||| |||||||||||||||| |||| | | |  || |||| |||| | || |  ||||||    
T  38887191 aaccctaatt-ctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggattacata-cttatgattaaagaaggttagtttcaccct 38887094  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctc 219  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||    
T  38887093 taccttaggttagatgatcacaagtttctaccgctttctcttctc 38887049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 35895088 - 35895162
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||| ||  |||| |||||||| |||||||||    
T  35895088 gttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttagattagatgat 35895162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 24723403 - 24723312
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   |||||||||||| |||||||||||||||||||    
T  24723403 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 24723312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 51324504 - 51324601
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttct 226  Q
    ||||||||| |||||||  |  ||||| ||||| || || |||||||||||||| ||   |||||||||||| |||||||||||||||||||| ||||    
T  51324504 tttcagaatcatacaacttagaattagggaaagttagtctcacccttaccttagattgattgatcgcaaggttctaccgctttctcttctctggttct 51324601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 191
Target Start/End: Complemental strand, 20708163 - 20708049
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 175  Q
    ||||||||||||| |||||||| || || |||||||  ||| ||||| |||||||||||||||||| ||| || | ||| |||| | || || |||||||    
T  20708163 aaccctaatttctttaacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactca-tgttaaagaaggttagtcccaccctt 20708065  T
Q  176 accttaggttagatga 191  Q
    ||||||| || |||||    
T  20708064 accttagattggatga 20708049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 7052175 - 7052126
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| |||||    
T  7052175 caattattaccttaattcatcagattacctactctttcaacaatcaaatt 7052126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 14294919 - 14294858
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 133  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  14294919 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 14294858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 51131317 - 51131378
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 133  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  51131317 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 51131378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 16401902 - 16401963
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctta 181  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||| || || |||||||||||||    
T  16401902 gttaaaccctatttcagaattata-aacccattattagag-aagttagtcccacccttacctta 16401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 21239205 - 21239162
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaat 63  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||    
T  21239205 caattattaccttagttcatcggattacctactctttcaacaat 21239162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 16058366 - 16058301
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||  || || |||||||||||||| |||||||||||    
T  16058366 tttcagaattatacaacttagaattagagaaatttagtcccacccttaccttagattagatgatcg 16058301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 19676711 - 19676776
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19676711 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 19676776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 21046101 - 21046036
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 21046036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 21243832 - 21243799
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaatta 139  Q
    ||||||||||||||||||||||||||||| ||||    
T  21243832 aacaactacaaggttaaaccctttttcaggatta 21243799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 1e-58; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 23610563 - 23610717
Alignment:
Q  66 aattcaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctat 165  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||     
T  23610563 aattaaatctaaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctag 23610662  T
Q  166 tcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    || |||||||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  23610663 tcccacccttaccttaggttagatgttcgcaaggttctaccgttttctcttctct 23610717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 28652717 - 28652593
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac- 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28652717 acatcaattattaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactaca 28652618  T
Q  115 aaggttaaaccctttttcagaatta 139  Q
    |||| ||||||||||||||||||||    
T  28652617 aaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 21335376 - 21335265
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  21335376 aatctaaccataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 21335277  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  21335276 cccttaccttag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 21315586 - 21315475
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  21315586 aatctaacaataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 21315487  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  21315486 cccttaccttag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 21369235 - 21369358
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  || ||    
T  21369235 aatctaaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtccca 21369334  T
Q  171 cccttaccttaggttagatgatcg 194  Q
    |||||||||||| |||||||||||    
T  21369335 cccttaccttagattagatgatcg 21369358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 149668 - 149488
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaactaca-- 115  Q
    |||||||||||||||||||| |||||||||||||||| |||||| || || ||  || |||||||||||||||||||||||||||||||| ||| |||      
T  149668 caattattaccttaattcatcggattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaactaacaa-aacgacaac 149570  T
Q  116 aggttaaaccc---tttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    | |||||||||   ||||| ||||||||||||| |||||||||||||||||| |  |||||||||||||| |||||||||||    
T  149569 atgttaaaccccttttttttagaattatacaactcattattagagaaagctagttccacccttaccttagattagatgatcg 149488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 19647120 - 19647246
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  |||||||||||||||||||||  ||| |||||| || || |||| ||||||||| |||||||  ||||||||||  |||||||||    
T  19647120 acatcaattcttatgttaattcattggattacctacattttcaacaatcaatttgcaatttaaccctaacttctatacaatcaaaactattaacaactac 19647219  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    ||| |||||||||||||||||||||||    
T  19647220 aagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 45535812 - 45535938
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  ||||||||||||||||||||| |||| |||||| ||||| |||| ||| ||||| |||||||||| || || || ||||||| ||    
T  45535812 acatcaatttttatgttaattcattggattacctacactttcaacaatcaaattgcaatttaaacctaacttctataacaacagaattatcaacaacaac 45535911  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    ||| |||||||||||||||||||||||    
T  45535912 aagattaaaccctttttcagaattata 45535938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 19201252 - 19201160
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19201252 tttcagaattatacaacttagaattagagaaagttagtctcacccttaacttaggttagatgatcgcaaggttctaccgctttctcttctctg 19201160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 28345092 - 28344987
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||||||||||||||| |||||||||| ||| ||| | |||||||| |||| ||||| ||||| |||||||||||||||||||| |||||||||    
T  28345092 taaccctaatttctataacatcgaaactaacaa-aacaacatg-ttaaacccctttttagaatcatacagcccattattagagaaagctagtcacaccct 28344995  T
Q  175 taccttag 182  Q
    || |||||    
T  28344994 tatcttag 28344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 23801386 - 23801559
Alignment:
Q  23 ttattaccttaattcattggattacctactcttttaacaattaaattcaatct---aaccctaatttctataacatcaaaactaacaacaactacaag-- 117  Q
    ||||||||||||||||| || ||||||||||||| |||||| || || ||| |   || ||||||||||  |  ||||||| ||| || ||| ||||       
T  23801386 ttattaccttaattcatcgggttacctactctttcaacaatcaattttaattttaaaaacctaatttctcaacaatcaaaattaataa-aacaacaacat 23801484  T
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||||| |||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  23801485 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttagattagatgat 23801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 182
Target Start/End: Complemental strand, 20006121 - 20005970
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    |||||||||| |||||||||| |||| |||||| ||||| ||||  || ||||| |||||||||||||||| ||  |||||| ||||  |||||||||||    
T  20006121 ttaattcattcgattacctacactttcaacaatcaaattgcaattcaaacctaacttctataacatcaaaattattaacaacaacaaaattaaacccttt 20006022  T
Q  130 ttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||  || ||| |||| |||| |||| || ||||||||||||||    
T  20006021 ttcagaattata-gactcatgattaaagaaggctagtcccacccttaccttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 25584367 - 25584302
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 141  Q
    |||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  25584367 aaccctaacttctataacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 34491401 - 34491239
Alignment:
Q  26 ttaccttaattcattggatt-acctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaacta----acaacaactacaagg 118  Q
    |||| |||||||| |||||| || ||||||||||||||| || ||  |||| ||||||||| || ||||||||||||||||    |||||||| || | |    
T  34491401 ttacgttaattcaatggatttacttactcttttaacaatcaattttgcaat-taaccctaaattttataacatcaaaactacaaaacaacaacaaccatg 34491303  T
Q  119 ttaaaccctttttcagaattatacaacccatta-ttagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||||||||||||||||| | ||| |||||| |||||| || ||||||||||||||    
T  34491302 ttaaaccctttttcagaattatacaactcgttatttagag-aagctagtcccacccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 45528442 - 45528553
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    |||||||||| |||||| ||| |||| |||||| ||||| |||| ||| ||||| |||||||||| || || || ||||||| ||||| ||||||  |||    
T  45528442 ttaattcatttgattacatacactttcaacaatcaaattgcaatttaaacctaacttctataacaacagaattatcaacaacaacaagattaaacatttt 45528541  T
Q  130 ttcagaattata 141  Q
    ||||||||||||    
T  45528542 ttcagaattata 45528553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 1383814 - 1383765
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    |||||||||| ||||||||| |||||||||||||||| |||||| |||||    
T  1383814 caattattacgttaattcatcggattacctactctttcaacaatcaaatt 1383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 17307486 - 17307551
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| |||||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcg 17307551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 25584218 - 25584186
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaa 107  Q
    |||||||||||||||||||||||||||||||||    
T  25584218 taaccctaatttctataacatcaaaactaacaa 25584186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 36734552 - 36734450
Alignment:
Q  80 ctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 177  Q
    ||||||||| ||| |||||||| | ||||||||| || | |||||||||| ||| ||||||||| ||||||||||||||| ||| || || |||||||||    
T  36734552 ctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctattttagaattata-aacccattattagag-aagttaatcccacccttac 36734455  T
Q  178 cttag 182  Q
    |||||    
T  36734454 cttag 36734450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 18388202 - 18388151
Alignment:
Q  169 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    |||||||||||||| ||   |||||||||||| |||||||||||||||||||    
T  18388202 cacccttaccttagattgattgatcgcaaggttctaccgctttctcttctct 18388151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 24780892 - 24780827
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 24780827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 21683171 - 21683035
Alignment:
Q  84 tttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 183  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||    
T  21683171 tttctataacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttagg 21683073  T
Q  184 ttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||| |||||||||||||||    
T  21683072 ttagatgatcgcaaggtcctacagctttctcttctctg 21683035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 25601492 - 25601371
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactaca 115  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||   |    
T  25601492 acatcaattattaccttaattctttggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatgaaaactaacaactac--aa 25601395  T
Q  116 aggttaaaccctttttcagaatta 139  Q
    ||||||||||||||||||||||||    
T  25601394 aggttaaaccctttttcagaatta 25601371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 196
Target Start/End: Complemental strand, 20410619 - 20410497
Alignment:
Q  72 atctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 171  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||    
T  20410619 atctaaccctaatttctat--catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccac 20410522  T
Q  172 ccttaccttaggttagatgatcgca 196  Q
    ||||||||||  |||||||||||||    
T  20410521 ccttaccttaaattagatgatcgca 20410497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 19825576 - 19825473
Alignment:
Q  91 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 190  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatg 19825477  T
Q  191 atcg 194  Q
    ||||    
T  19825476 atcg 19825473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 15998831 - 15998943
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |  ||||||||||| || || ||    
T  15998831 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctca 15998930  T
Q  171 cccttaccttagg 183  Q
    |||||||||||||    
T  15998931 cccttaccttagg 15998943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 18982515 - 18982625
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 171  Q
    |||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |||    
T  18982515 tctaaccctaatttctctaatcatcaaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccac 18982614  T
Q  172 ccttaccttag 182  Q
    | |||||||||    
T  18982615 cgttaccttag 18982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 24506265 - 24506155
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttt 130  Q
    |||||||||||||||||||| |||| |||||||||||| |||| ||| ||||| ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  24506265 taattcattggattacctacactttcaacaattaaattacaatttaaacctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttt 24506166  T
Q  131 tcagaattata 141  Q
    |||||||||||    
T  24506165 tcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 10446162 - 10446280
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    |||||||||||||||||||||| |||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| || ||||    
T  10446162 taaccctaatttctataacatcgaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacc 10446260  T
Q  173 cttaccttaggttagatgat 192  Q
    |||||||||| |||||||||    
T  10446261 cttaccttagattagatgat 10446280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 1818848 - 1819005
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaa 123  Q
    |||| |||||||| || |||||||||||||| |||||| || ||  |||| |||||||||||||||||||||||||||||  |||||||||||| |||||    
T  1818848 ttacgttaattcaatgaattacctactctttcaacaatcaattttgcaatttaaccctaatttctataacatcaaaactattaacaactacaagcttaaa 1818947  T
Q  124 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||| ||||  || ||| |||| |||| | || || ||||||||||||||    
T  1818948 ccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 23658044 - 23658142
Alignment:
Q  85 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||    
T  23658044 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 34140554 - 34140445
Alignment:
Q  81 taatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 180  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||   ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||    
T  34140554 taattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattagag-aagctagtcccacccttacctt 34140457  T
Q  181 aggttagatgat 192  Q
    || |||||||||    
T  34140456 agattagatgat 34140445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 7217347 - 7217204
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 175  Q
    |||||||||| ||| ||||||||| |||  ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||    
T  7217347 aaccctaatt-ctacaacatcaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtctcaccctt 7217250  T
Q  176 accttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||    
T  7217249 accttaggctagatgatcgcaaggttctaccgctttctcttttctg 7217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 34153170 - 34153061
Alignment:
Q  81 taatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacctt 180  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| |   ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||    
T  34153170 taattcctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattata-aacccattattagag-aagctagtcccacccttacctt 34153073  T
Q  181 aggttagatgat 192  Q
    || |||||||||    
T  34153072 agattagatgat 34153061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 29045260 - 29045334
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||  ||||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 29045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 18455147 - 18455034
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 205  Q
    |||||||||||||||||| |||||||||| |||| | | |  || |||| |||| | || || ||||||||||||||||||||||||| |||||| ||||    
T  18455147 aacaactacaaggttaaaacctttttcaggattacata-cttatgattaaagaaggttactcccacccttaccttaggttagatgatcacaaggttctac 18455049  T
Q  206 cgctttctcttctct 220  Q
    |||||||||||||||    
T  18455048 cgctttctcttctct 18455034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 22557204 - 22557339
Alignment:
Q  85 ttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttagg 183  Q
    ||||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | |  || || | |||| | || || |||||||||||||||    
T  22557204 ttctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgataa-agaaggttactcccacccttaccttagg 22557301  T
Q  184 ttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  22557302 ttagatgatcgcaaggttctactgctttctcttctctg 22557339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 18982317 - 18982422
Alignment:
Q  35 ttcattggattacctactcttttaacaattaaatt-caatct---aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttt 130  Q
    ||||||||||||||||| |||| |||||| ||||| |||| |   |||||||| ||||| | ||||||||||| ||||||||||||  ||||||||||||    
T  18982317 ttcattggattacctacgctttcaacaatcaaattgcaatttaaaaaccctaacttctacagcatcaaaactatcaacaactacaaaattaaaccctttt 18982416  T
Q  131 tcagaa 136  Q
    ||||||    
T  18982417 tcagaa 18982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 29045150 - 29045197
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaat 63  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  29045150 acatcaattattaccttagttcatcggattacctactctttcaacaat 29045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 18459207 - 18459308
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaa-ttcaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    ||||||||||||||| ||||| |||| |||||| ||| ||||||  || ||||| ||||||||||||||||||   || ||||| ||  |||||||||||    
T  18459207 ttaattcattggatttcctacactttcaacaatcaaatttcaattaaaacctaacttctataacatcaaaactgttaaaaactataaaattaaacccttt 18459306  T
Q  130 tt 131  Q
    ||    
T  18459307 tt 18459308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 28948575 - 28948667
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    ||||||||| |||||||  |  ||||||||||| || || |||||||||||||| ||   |||||||||||| ||| |||||||| |||||||    
T  28948575 tttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagattgattgatcgcaaggttctatcgctttcttttctctg 28948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 31734655 - 31734718
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    ||||||||||| || ||||||||||| ||  ||||||| ||||||||||||||||||||||||||    
T  31734655 aaccctaattt-tacaacatcaaaacctattaacaactgcaaggttaaaccctttttcagaatta 31734718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 190
Target Start/End: Original strand, 13285656 - 13285809
Alignment:
Q  38 attggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcaga 135  Q
    |||||||||||||| |||| |||||| ||||| ||  || || | |||||||  |||||||| || |  ||||||| |||| | ||||||| ||||||||    
T  13285656 attggattacctacactttcaacaatcaaattgaaattcaaaacataatttcattaacatcataattt-caacaacaacaatggtaaaccccttttcaga 13285754  T
Q  136 attatacaacccattattagagaaagctattcacacccttaccttaggttagatg 190  Q
    |||||  ||| ||| |||| |||| | || || |||||||||||||| |||||||    
T  13285755 attatgaaactcatgattatagaaggttagtcccacccttaccttagattagatg 13285809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 7827972 - 7828037
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 7828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 19235123 - 19235216
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctcttctctg 221  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||| ||||| || | ||||  |||||| ||||  |||||||||||||||    
T  19235123 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaacttagattggttgattacaaggttctacaagctttctcttctctg 19235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 19655283 - 19655218
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  19655283 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 19655218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 23150339 - 23150274
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 23150274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 27330033 - 27329980
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||||||||||||||| |  ||||||||||| || |||||| ||||||||||    
T  27330033 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttag 27329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 27390773 - 27390720
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||||||||||||||| |  ||||||||||| || |||||| ||||||||||    
T  27390773 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttag 27390720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 35057448 - 35057555
Alignment:
Q  34 attcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttt 131  Q
    |||||||||||||||||| |||| |||||| ||||| ||  || || |||||||||  |||||||| || |  ||||||| |||| | ||||||| ||||    
T  35057448 attcattggattacctacactttcaacaatcaaattgaaattcaaaacctaatttcattaacatcataa-tttcaacaacaacaatggtaaacccctttt 35057546  T
Q  132 cagaattat 140  Q
    |||||||||    
T  35057547 cagaattat 35057555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 23431551 - 23431488
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  | ||||||||||||||||||||||||||| ||||    
T  23431551 aaccctaatt-ctacaacatcaaaacctattagcaactacaaggttaaaccctttttcaggatta 23431488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 660732 - 660878
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || |     
T  660732 aatctaacccaaatttctataacatcaaaactaacaacaactacaaggttaaa-cctttttcagaattatacaaccccttattagagaaagctagtc-cc 660829  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  660830 cccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 660878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 18744816 - 18744927
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||    
T  18744816 aatctaaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtccca 18744915  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  18744916 cccttaccttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 23199317 - 23199194
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||    
T  23199317 aatctaaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtccca 23199218  T
Q  171 cccttaccttaggttagatgatcg 194  Q
    |||||||||||  |||||||||||    
T  23199217 cccttaccttaaattagatgatcg 23199194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 16063701 - 16063804
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 178  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||    
T  16063701 cctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttacc 16063800  T
Q  179 ttag 182  Q
    ||||    
T  16063801 ttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 1627178 - 1627071
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccct-ttttcagaattatacaacccattattagagaaagctattcac 169  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||| ||||||||||||| |||||||||||||||||| || |    
T  1627178 aatctaaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtccc 1627079  T
Q  170 acccttac 177  Q
    ||||||||    
T  1627078 acccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 6551392 - 6551289
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 178  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||||    
T  6551392 cctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttacc 6551293  T
Q  179 ttag 182  Q
    ||||    
T  6551292 ttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 21398803 - 21398631
Alignment:
Q  26 ttaccttaattcattggatt-acctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaa--caactacaaggtt 120  Q
    |||| |||||||| |||||| ||||||||||| |||||  || ||  |||| |||||||||||||||||||||||||||||||||  |||  ||| | |     
T  21398803 ttacgttaattcaatggatttacctactctttcaacaaccaattttgcaat-taaccctaatttctataacatcaaaactaacaaaacaaaaacatgtta 21398705  T
Q  121 aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    || ||| |||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  21398704 aaccccctttttagaatcatacaacccattattagagaaagctaatcccacccttaccttagattagatgatcg 21398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 32607428 - 32607303
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| ||    
T  32607428 caatttaactctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 32607330  T
Q  168 acacccttaccttaggttagatgatcg 194  Q
     |||||||||||||| |||||| ||||    
T  32607329 ccacccttaccttagattagataatcg 32607303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 1627074 - 1626881
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaac-taacaacaactacaaggttaa 122  Q
    |||| |||||||| ||| ||||||||||||| |||||| || ||  |||   ||| ||||||| || ||||||||||| ||  |||||||||||||||||    
T  1627074 ttacgttaattcaatggtttacctactctttcaacaatcaattttgcaaataaactctaattt-tacaacatcaaaacctattaacaactacaaggttaa 1626976  T
Q  123 accctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttct 218  Q
    |||||||||||| |||| | | |  || |||| |||| | || |||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1626975 accctttttcaggattacata-cttatgattaaagaaggttagtcacacccttaccttaggttagataatcgcaaggttctaccgctttctcttct 1626881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 24068126 - 24068234
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaac 124  Q
    |||| |||||||| ||| ||||||||| ||| |||||||||||||||| |||||||||| ||| ||||||||||| |||  |||||||||||||||||||    
T  24068126 ttacgttaattcaatggtttacctactttttcaacaattaaattcaatataaccctaatctctttaacatcaaaacctattaacaactacaaggttaaac 24068225  T
Q  125 cctttttca 133  Q
    |||||||||    
T  24068226 cctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 21398948 - 21398833
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac----aaggttaaaccc- 126  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||    ||||||||||||     
T  21398948 taattaattagattacctactcttttgacaattaaattcaatct-accctattctctataacatcaaaactaacaacaacaacaacaaaggttaaaccct 21398850  T
Q  127 tttttcagaattataca 143  Q
    |||||||||||||||||    
T  21398849 tttttcagaattataca 21398833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 26749978 - 26750122
Alignment:
Q  75 taaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccc 173  Q
    ||||||||||| ||| |||||||||||| |  ||||||||||||||||||||| ||||||| |||||| | |  || |||| | || | || || |||||    
T  26749978 taaccctaatt-ctacaacatcaaaacttattaacaactacaaggttaaaccccttttcaggattatata-cttatgattaaaaaaggttagtctcaccc 26750075  T
Q  174 ttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  26750076 ttaccttaggttagatgatcgcaaggttctaccgctttctcttctct 26750122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 21504040 - 21504147
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaattc--aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctt 128  Q
    |||||||||||||| ||||||||||| |||||| || ||   ||| |||||||||||||||||||||||||||||  |||||||||||  ||||||||||    
T  21504040 ttaattcattggatcacctactctttcaacaatgaatttgcaaatttaaccctaatttctataacatcaaaactactaacaactacaaacttaaaccctt 21504139  T
Q  129 tttcagaa 136  Q
    ||||||||    
T  21504140 tttcagaa 21504147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 14025881 - 14025770
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 205  Q
    ||||||||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||| ||||||||||||||||| ||||    
T  14025881 aacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttagattagatgatcgcaaggttctac 14025783  T
Q  206 cgctttctcttct 218  Q
    |||||||| ||||    
T  14025782 cgctttcttttct 14025770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 8833310 - 8833166
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  |||||||| |||||||||||||||||||| |||| | | |  || |||| |||| |  | || ||||||    
T  8833310 aaccctaatt-ctacaacatcaaaacctattaacaactataaggttaaaccctttttcaggattacata-cttatgattaaagaaggtcagtcccaccct 8833213  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||    
T  8833212 taccctaggttagatgatcgcaaggttctacagctttctcttctctg 8833166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 20313226 - 20313328
Alignment:
Q  80 ctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 177  Q
    ||||||||| ||| |||||||| | ||||||||| || | |||||||||| ||||||||||||| |||||| |||||||| |||||| || |||||||||    
T  20313226 ctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagaattata-aacccactattagag-aagctagtcccacccttac 20313323  T
Q  178 cttag 182  Q
    |||||    
T  20313324 cttag 20313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 31621862 - 31622008
Alignment:
Q  20 caattattaccttaattcattggattacctactctttt-aacaattaaattcaatct---aaccctaatttctataacatcaaaactaac--aacaacta 113  Q
    |||||||||||||||||||| || |||||||||||||| |||||| || || ||| |   || ||||||||||  |  ||||||| ||||  |||||| |    
T  31621862 caattattaccttaattcatcggtttacctactcttttcaacaatcaattttaatttcaaaaacctaatttctcaacaatcaaaattaacaaaacaacaa 31621961  T
Q  114 caaggttaaaccctttttcagaattatacaacccattattagagaaag 161  Q
    | | ||||||||| |||| ||||| |||||||| ||||||||||||||    
T  31621962 c-atgttaaacccatttttagaatcatacaaccaattattagagaaag 31622008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 31622117 - 31622178
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 190  Q
    |||||||||||||||||| |  ||||||||||| || || |||||||||||||| |||||||    
T  31622117 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttagattagatg 31622178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 36508905 - 36508856
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| |||||    
T  36508905 caattattaccttaattcatcagattacctactctttcaacaatcaaatt 36508856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 21300096 - 21300032
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 193  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| ||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttagattagatgatc 21300032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 22111923 - 22111955
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaa 107  Q
    |||||||||||||||||||||||||||||||||    
T  22111923 taaccctaatttctataacatcaaaactaacaa 22111955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 26762350 - 26762413
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  26762350 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 26762413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 36315305 - 36315366
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 133  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||| ||||||||||| |||||||    
T  36315305 tctaaccctaatttctctaatcctcaaacctaacgacaactataaggttaaaccatttttca 36315366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 52 - 220
Target Start/End: Original strand, 26650 - 26818
Alignment:
Q  52 tcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatta 151  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |  |    
T  26650 tcttttaacaattaaattcaatctaaccctaatctctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaa 26749  T
Q  152 ttagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    |||||||||| || || |||||||||| ||| ||   |||||||||||| |||||||||||||||||||    
T  26750 ttagagaaagttaatcccacccttaccgtagattgattgatcgcaaggttctaccgctttctcttctct 26818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 23514 - 23626
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaattc-aatctaac-cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctt 128  Q
    |||||||||| |||||||||| ||||||||||| |||||  ||| |||  ||||| |||||||||||||||||||  |||||||||||  ||||||||||    
T  23514 ttaattcatttgattacctacacttttaacaataaaattgtaatttaaaacctaacttctataacatcaaaactattaacaactacaaaattaaaccctt 23613  T
Q  129 tttcagaattata 141  Q
    ||| |||||||||    
T  23614 ttttagaattata 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 5415 - 5267
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |  ||||||||||| || || ||    
T  5415 aatctaaccctaatatctataacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtccca 5316  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5315 cccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 5267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 5220 - 5170
Alignment:
Q  169 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 219  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5220 cacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 1962 - 2073
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  1962 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctca 2061  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  2062 cccttaccttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 71 - 182
Target Start/End: Complemental strand, 186306 - 186195
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  186306 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctca 186207  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  186206 cccttaccttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 3528 - 3411
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||    
T  3528 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccaccct 3429  T
Q  175 taccttaggttagatgat 192  Q
    |||||||| |||||||||    
T  3428 taccttagattagatgat 3411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 26 - 192
Target Start/End: Original strand, 4832 - 4999
Alignment:
Q  26 ttaccttaattcattggattacc-tactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaa 123  Q
    |||| |||||||| ||| ||||| |||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  4832 ttacgttaattcaatggtttaccctactctttcaacgattaaattcaatctaaccctaatcactataacatcaaaactaacaacaactacaaaggttaaa 4931  T
Q  124 ccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||| ||||||||||||| ||||||||||||||||||| || |||||||||||||  |||||||||    
T  4932 cccttttacagaattatacaa-ccattattagagaaagctagtcccacccttaccttatattagatgat 4999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 17208466 - 17208577
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| || ||    
T  17208466 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtccca 17208565  T
Q  171 cccttaccttag 182  Q
    ||||||||||||    
T  17208566 cccttaccttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 14641718 - 14641535
Alignment:
Q  13 tggacatcaattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaa 110  Q
    |||||| ||||||||||| ||||||||  ||||| ||||||||  | |||  || | |||  ||||| ||||||| | | |||||||| |||||||||||    
T  14641718 tggacaccaattattaccctaattcatcagattatctactcttaaatcaacaaattacaacttctaaacctaattcccaaaacatcaatactaacaacaa 14641619  T
Q  111 ctacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||    
T  14641618 ctacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttagattagatgatcg 14641535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 36 - 194
Target Start/End: Complemental strand, 50350963 - 50350803
Alignment:
Q  36 tcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccc--tttttc 132  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||  ||||||    
T  50350963 tcattggattacctacgcttttaacaattaaattcaatctaaccctaatctctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttc 50350864  T
Q  133 agaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||  || ||| |||| |||| | || || |||||||||||||| |||||||||||    
T  50350863 agaattata-tactcatgattaaagaaggttagtcccacccttaccttagattagatgatcg 50350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 29907582 - 29907702
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 171  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||    
T  29907582 tctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccac 29907681  T
Q  172 ccttaccttaggttagatgat 192  Q
    ||||||||||| |||||||||    
T  29907682 ccttaccttagattagatgat 29907702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 29948748 - 29948868
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 171  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||    
T  29948748 tctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccac 29948847  T
Q  172 ccttaccttaggttagatgat 192  Q
    ||||||||||| |||||||||    
T  29948848 ccttaccttagattagatgat 29948868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 29997902 - 29998022
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacac 171  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||    
T  29997902 tctaaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccac 29998001  T
Q  172 ccttaccttaggttagatgat 192  Q
    ||||||||||| |||||||||    
T  29998002 ccttaccttagattagatgat 29998022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 75 - 182
Target Start/End: Original strand, 14520392 - 14520499
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| || ||||||    
T  14520392 taaccctaatttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccaccct 14520491  T
Q  175 taccttag 182  Q
    ||||||||    
T  14520492 taccttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 24547142 - 24547290
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattca 168  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||   ||||||| | |||| ||||| ||||||||||||||||||||||| || ||     
T  24547142 aatctaaccctaatttctataacatcaaa-ctaacaa-aacaacaacatgttaaactcctttttagaatcatacaacccattattagagaaagatagtct 24547239  T
Q  169 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctc 219  Q
    || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24547240 catccttaccttaggttagatgatcgcaaggttctaccgctttctcttctc 24547290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 24549061 - 24548914
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||   |||||||| |||| ||||| |||||||||||||||||| |||| || || ||    
T  24549061 aatctaaccctaatttctataacatcaaa-ctaacaa-aacaacata-ttaaacccctttttagaatcatacaacccattattagataaagttagtctca 24548965  T
Q  171 cccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  24548964 cccttactttaggttagatgatcgcaaggttctaccgctttctcttctctg 24548914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 3160792 - 3160626
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  ||||||||||| |||||||||||||| |||||| ||||| |||| ||| |||||||||||||| |||||||||| ||||||||||    
T  3160792 acatcaatttttatattaattcattgaattacctactctttcaacaatcaaattgcaatttaaacctaatttctataatatcaaaactatcaacaactac 3160693  T
Q  115 aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    || ||||||||| |||| |||||||||  || ||| |||| |||| | || || ||||||||||||||    
T  3160692 aaagttaaacccatttttagaattata-tactcatgattaaagaaggttagtctcacccttaccttag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 6159345 - 6159470
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||| | ||    
T  6159345 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagcgagtc 6159443  T
Q  168 acacccttaccttaggttagatgatcg 194  Q
     |||||||||||||| |||||||||||    
T  6159444 tcacccttaccttagattagatgatcg 6159470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 14152504 - 14152394
Alignment:
Q  76 aaccctaatttctataacatcaaaactaac-aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| |||||||||||  || |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||    
T  14152504 aaccctaatt-ctacaacatcaaaacctactaacaactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccaccct 14152406  T
Q  175 taccttaggtta 186  Q
    ||||||||||||    
T  14152405 taccttaggtta 14152394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 182
Target Start/End: Complemental strand, 3527311 - 3527156
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaac 124  Q
    |||| |||||||| ||| ||||||||||||| |||||| ||  | |||  ||||||||||||||||||||||||||||||||| ||| ||| | ||||||    
T  3527311 ttacgttaattcaatggcttacctactctttcaacaatcaatctacaaattaaccctaatttctataacatcaaaactaacaa-aacaacatg-ttaaac 3527214  T
Q  125 cctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    || |||| | ||| |||||||||||||||||||||||||| || ||||||||||||||    
T  3527213 ccctttttaaaatcatacaacccattattagagaaagctagtcccacccttaccttag 3527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 22841390 - 22841278
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaa--caactacaag---gttaaaccctttttcagaattatacaacccattattagagaaagctattcac 169  Q
    ||||||||||||||||||| |||||||||||||  |||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  22841390 taaccctaatttctataacctcaaaactaacaaaacaacaacaatcatgttaaaccctttttcagaattatacaacccattattagagaaagctagtccc 22841291  T
Q  170 acccttaccttag 182  Q
    |||||||| ||||    
T  22841290 acccttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 181
Target Start/End: Complemental strand, 54875586 - 54875474
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| ||    
T  54875586 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 54875488  T
Q  168 acacccttacctta 181  Q
     |||||||||||||    
T  54875487 ccacccttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 182
Target Start/End: Complemental strand, 2841618 - 2841505
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||   ||||||||  |||| ||||| |||||||||||||||||||||||||| ||    
T  2841618 caatttaactctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacctctttttagaatcatacaacccattattagagaaagctagtc 2841520  T
Q  168 acacccttaccttag 182  Q
    |||||||||||||||    
T  2841519 acacccttaccttag 2841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 6156651 - 6156763
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| ||    
T  6156651 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttt-agaatcatacaacccattattagagaaagctagtc 6156748  T
Q  168 acacccttaccttag 182  Q
     ||||||||||||||    
T  6156749 ccacccttaccttag 6156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 181
Target Start/End: Complemental strand, 17684947 - 17684835
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| |||||  ||||||||| |||| ||||| |||||||||||||||| ||||| ||| ||    
T  17684947 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtc 17684849  T
Q  168 acacccttacctta 181  Q
     |||||||||||||    
T  17684848 ccacccttacctta 17684835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 14442115 - 14442273
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||  |||| ||||| |||||||||||||||| ||||||||| ||    
T  14442115 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaaccgctttttagaatcatacaacccattattacagaaagctagtc 14442213  T
Q  168 acacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttctcc 228  Q
     |||||||||||||| ||   |||||| ||||| |||| |  |||||||||||| ||||||    
T  14442214 ccacccttaccttagattgattgatcgaaaggttctacag-gttctcttctctggttctcc 14442273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 76 - 181
Target Start/End: Original strand, 5215594 - 5215699
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  || ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |  ||||||    
T  5215594 aaccctaatt-ctacaacatcaaaacctattaataactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccaccct 5215692  T
Q  175 tacctta 181  Q
    |||||||    
T  5215693 tacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 70 - 181
Target Start/End: Complemental strand, 17669810 - 17669698
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||||||| ||    
T  17669810 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtc 17669712  T
Q  168 acacccttacctta 181  Q
     || | ||||||||    
T  17669711 ccatcattacctta 17669698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 48631218 - 48631344
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  ||||||||||| ||||||||| |||| |||||| || |  |||| ||||||| | |||||||||||||||||||  |||||||||    
T  48631218 acatcaattcttatgttaattcattgaattacctacactttcaacaatcaattagcaatttaaccctgacttctataacatcaaaactattaacaactac 48631317  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    ||| |||||||||||||||||| ||||    
T  48631318 aagcttaaaccctttttcagaactata 48631344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 174
Target Start/End: Complemental strand, 45803506 - 45803338
Alignment:
Q  13 tggacatcaattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatttctataacatcaaaactaacaa--- 107  Q
    |||||||||||| |||  ||||||||| |||||||||||||||| |||||| || || | | |  || ||||||||||  |  ||||||| ||||||       
T  45803506 tggacatcaattcttatgttaattcatcggattacctactctttcaacaatcaattttagtttcaaaacctaatttctcaacaatcaaaattaacaaaac 45803407  T
Q  108 --caactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
      |||| || | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  45803406 aacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 141
Target Start/End: Complemental strand, 21845801 - 21845691
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaattcaa-tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttt 130  Q
    ||||| |||| |||| ||||| |||||||||| || | ||| || || |||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  21845801 taatttattgaattatctacttttttaacaatcaattccaaatcaaaacctaatttctataacatcaaaactattaacaactacaagcttaaaccctttt 21845702  T
Q  131 tcagaattata 141  Q
    |||||| ||||    
T  21845701 tcagaactata 21845691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 15566721 - 15566809
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || ||||||||| |||| ||| |||||||    
T  15566721 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttagattacatgatcg 15566809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 2247942 - 2247883
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 164  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  2247942 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 2247883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 50755360 - 50755274
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaa--caactacaaggttaaaccctttttcagaattatacaacccattattagagaaag 161  Q
    ||||||||||||||||||||||||||||||||  |||| || | ||||||||| |||| ||||| |||||| ||||||||||||||||    
T  50755360 aaccctaatttctataacatcaaaactaacaaagcaacaac-atgttaaacccctttttagaatcatacaatccattattagagaaag 50755274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 12917384 - 12917305
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||| || | |||||||||||||| ||||| ||||||||||||||||||||||| || || |||||||| |||||    
T  12917384 aacaacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 13520408 - 13520449
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggtt 120  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  13520408 cctaattcctataacatcaaaactaacaacaactacaaggtt 13520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 25202036 - 25202187
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaattcaa-tctaaccctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctt 128  Q
    |||||||||| |||| ||||  |||||||||| || | ||| || || |||||||||| ||| |||||||| | ||||||||| || | ||||||||||     
T  25202036 taattcattgaattatctacctttttaacaatcaattccaaatcaaaacctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaacccta 25202135  T
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||| ||||| ||||||||||||| ||| |||| || ||||||||||||||    
T  25202136 tttcagatttata-aacccattattagcgaa-gctagtcccacccttaccttag 25202187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 6003133 - 6003247
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 175  Q
    ||||||||||||| |||||||| || || |||||||  ||| ||||  |||||||||||||||||| ||| || ||||| |||| | || || |||||||    
T  6003133 aaccctaatttctttaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactca-tattaaagaaggttagtcccaccctt 6003231  T
Q  176 accttaggttagatga 191  Q
    ||||||| || |||||    
T  6003232 accttagattggatga 6003247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 6805089 - 6805040
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| |||||    
T  6805089 caattattaccttaattcatcagattacctactctttcaacaatcaaatt 6805040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 12151098 - 12150993
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    |||||||||||| |||||||| |||| |||||| || ||  ||  ||||||||| |||||||||||||||||||  ||||| ||||||  |||| || ||    
T  12151098 ttaattcattgggttacctacactttcaacaatcaatttgaaaattaaccctaacttctataacatcaaaactattaacaaatacaagcctaaatccctt 12150999  T
Q  130 ttcaga 135  Q
    ||||||    
T  12150998 ttcaga 12150993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 12155178 - 12155089
Alignment:
Q  31 ttaattcattggattacctactcttttaacaat----taaattcaatctaaccctaatttctataacatcaaaactaacaacaactacaa 116  Q
    |||||||||||| |||||||| |||| ||||||    ||| | |||  ||||||||| |||||||||||||||||||  |||||||||||    
T  12155178 ttaattcattgggttacctacactttcaacaatcaattaattgcaaattaaccctaacttctataacatcaaaactattaacaactacaa 12155089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 53646163 - 53646100
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  53646163 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 53646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 54330411 - 54330348
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  54330411 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 54330348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 11563724 - 11563821
Alignment:
Q  128 ttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttct 226  Q
    ||||||||||||||| ||  |  ||||||||| | || || |||||||||||||| ||||||||||| ||||| |||| |  |||||||||||| ||||    
T  11563724 ttttcagaattataccacttagaattagagaaggttagtcccacccttaccttagattagatgatcggaaggttctacag-gttctcttctctggttct 11563821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 17044966 - 17045031
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 17045031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 17047126 - 17047191
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 17047191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 17518925 - 17518860
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || ||||||| |||||| |||||||||||    
T  17518925 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcg 17518860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 17533787 - 17533722
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || ||||||| |||||| |||||||||||    
T  17533787 tttcagaattatacaacttagaattagagaaagttagtcccacccttgccttagattagatgatcg 17533722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 22306635 - 22306570
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 22306570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 182
Target Start/End: Complemental strand, 48043628 - 48043477
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaattcaa-tctaaccctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctt 128  Q
    |||||||||| |||| ||||  |||||||||| || | ||| || ||  ||||||||| ||| |||||||| | ||||||||| |  | ||||||||||     
T  48043628 taattcattgaattatctacctttttaacaatcaattccaaatcaaaatctaatttctctaatcatcaaaatcaaacaacaacaatcatgttaaacccta 48043529  T
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||| ||||||| || |||||||||||||| |||| | |||||||||||||||    
T  48043528 tttcaaaattata-aatccattattagagaa-gctagttacacccttaccttag 48043477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 49900730 - 49900795
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||  || || |||||||||||||| |||||||||||    
T  49900730 tttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagattagatgatcg 49900795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 13522385 - 13522353
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaa 107  Q
    |||||||||||||||||||||||||| ||||||    
T  13522385 taaccctaatttctataacatcaaaattaacaa 13522353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 13522514 - 13522474
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttt 56  Q
    ||||||||| |||  ||||||||||||||||||||||||||    
T  13522514 acatcaattcttatgttaattcattggattacctactcttt 13522474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 16050916 - 16050984
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggtta 186  Q
    |||||||||  ||||||||| |||||||  |  ||||||||||| || || ||||||||||||||||||    
T  16050916 gttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttaggtta 16050984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 17541434 - 17541498
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 193  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 17541498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 2831 - 2945
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 178  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  2831 cctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacc 2930  T
Q  179 ttaggttagatgatc 193  Q
    |||| ||| ||||||    
T  2931 ttagattaaatgatc 2945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 2704 - 2828
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaactaca-- 115  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| || || ||  || ||||||||||||||||||||||||| |||||| ||| |||      
T  2704 caattattaccttaattcatcagattacctactctttcaacaatcaattttaatttcaaaccctaatttctataacatcaaaagtaacaa-aacgacaac 2802  T
Q  116 aggttaaaccctttttcagaattata 141  Q
    | ||||||||| |||| |||||||||    
T  2803 atgttaaacccctttttagaattata 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 6560 - 6380
Alignment:
Q  40 tggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttttcagaatt 138  Q
    |||||||||||||| |||||||||| ||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  6560 tggattacctactcctttaacaattcaattcaatctagccataatctctataacatcaaaactaacaacaactacaaaggttaaacccttttt-agaatt 6462  T
Q  139 atacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    | |  ||  || ||||  ||| | || || |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6461 aca-tacttatgattaatgaaggttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctctg 6380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 28454 - 28564
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaactaacaacaactac-aaggttaaaccctttt 130  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||    
T  28454 taattaattggattacctactcttttaacaattaaattcaatctaaccctaatctctataacataaaaactaacaacaactacaaaggttaaaccctttt 28553  T
Q  131 tcagaattata 141  Q
    |||||||||||    
T  28554 tcagaattata 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 2287 - 2162
Alignment:
Q  94 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||||||  || || |||||||||||||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttaggttagatgatc 2188  T
Q  194 gcaaggtcctaccgctttctcttctc 219  Q
    ||||||| ||||||||||||||||||    
T  2187 gcaaggttctaccgctttctcttctc 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 18050 - 17927
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |  ||||||||||| || || ||    
T  18050 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtccca 17951  T
Q  171 cccttaccttaggttagatgatcg 194  Q
    |||||||||||| |||||||||||    
T  17950 cccttaccttagattagatgatcg 17927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 8e-42; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 16584 - 16380
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaa---tctaaccctaatttctataa-catcaaaactaacaacaactaca 115  Q
    ||||||||||| ||||||||   |||||||||||||| ||||| | ||||  |   |||||||||||||||| ||| ||||||| |||||||||||||||    
T  16584 caattattaccctaattcatcatattacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatcatcaaacctaacaacaactaca 16485  T
Q  116 aggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttctc 214  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||||||||| ||   ||||| |||||| ||||  ||||||||    
T  16484 aggttaaaccctttttcagaattatacaacccattattagataaagttaatctcacccttaccttagattgattgatcacaaggttctacaagctttctc 16385  T
Q  215 ttctc 219  Q
    |||||    
T  16384 ttctc 16380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 18867 - 18660
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaa---tctaaccctaatttctataa-catca-aaactaacaacaactac 114  Q
    ||||||||||| |||||||||  |||||||||||||| ||||| | ||||  |   |||||||||||||||| ||| |||||  | ||||||||||||||    
T  18867 caattattaccctaattcattatattacctactctttcaacaaatcaattttaatctctaaccctaatttctctaatcatcatgacctaacaacaactac 18768  T
Q  115 aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac-cgctttct 213  Q
    |||| |||||| ||||| ||||||||||||| ||||||||||||||| || || |||||| ||||||| || | ||||  |||||| ||||  |||||||    
T  18767 aaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttagattggttgattacaaggttctacaagctttct 18668  T
Q  214 cttctctg 221  Q
    ||||||||    
T  18667 cttctctg 18660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 136
Target Start/End: Complemental strand, 19007 - 18902
Alignment:
Q  35 ttcattggattacctactcttttaacaattaaatt-caatct---aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttt 130  Q
    ||||||||||||||||| |||| |||||| ||||| |||| |   |||||||| ||||||| ||||||||||| ||||||||||||  ||||||| ||||    
T  19007 ttcattggattacctacactttcaacaatcaaattgcaatttaaaaaccctaacttctatagcatcaaaactatcaacaactacaaaattaaaccttttt 18908  T
Q  131 tcagaa 136  Q
    ||||||    
T  18907 tcagaa 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 16718 - 16619
Alignment:
Q  40 tggattacctactcttttaacaattaaatt-caatctaa--ccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaa 136  Q
    |||||||||||| |||| |||||| ||||| |||| |||  |||||| ||||||| ||||||||||| ||||||||| ||  |||||| |||||||||||    
T  16718 tggattacctacactttgaacaatcaaattgcaatttaaaaccctaacttctatagcatcaaaactatcaacaactataaaattaaactctttttcagaa 16619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 158834 - 158782
Alignment:
Q  169 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||| ||   ||||||||||||  |||||||||||||||||||    
T  158834 cacccttaccttagattgattgatcgcaaggttttaccgctttctcttctctg 158782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 15725 - 15605
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||| || || ||    
T  15725 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagag-aagttagtccca 15627  T
Q  171 cccttaccttaggttagatgat 192  Q
    |||||||||||| |||||||||    
T  15626 cccttaccttagattagatgat 15605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 181
Target Start/End: Original strand, 990 - 1128
Alignment:
Q  44 ttacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattata 141  Q
    ||||||||| |||||||||| || ||  |||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  990 ttacctactattttaacaatcaattttgcaat-taaccataatttctaaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattata 1088  T
Q  142 caacccattattagagaaagctattcacacccttacctta 181  Q
    ||| ||||||||||||||||||| || |||||||||||||    
T  1089 caatccattattagagaaagctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 17627 - 17520
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||  |||||    
T  17627 taaccctaatttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgaccct 17528  T
Q  175 taccttag 182  Q
    ||||||||    
T  17527 taccttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 14737 - 14575
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaattcaatctaac-cctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctt 128  Q
    |||||| ||| ||||||||||||||| |||||| || | ||| | ||  |||||||||| ||| ||||||||||||||||||||||||  ||||||||||    
T  14737 ttaatttattagattacctactcttt-aacaatcaattccaaaccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctt 14639  T
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  14638 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattagatgat 14575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 23795 - 23633
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaattcaatctaac-cctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctt 128  Q
    |||||| ||| ||||||||||||||| |||||| || | ||| | ||  |||||||||| ||| ||||||||||||||||||||||||  ||||||||||    
T  23795 ttaatttattagattacctactcttt-aacaatcaattccaaaccaaaacctaatttctctaatcatcaaaactaacaacaactacaaatttaaaccctt 23697  T
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||    
T  23696 tttcagaattatacaacccattattagagaaagctagtctcacccttaccttagattagatgat 23633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 2566 - 2445
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacc--ctttttcagaattatacaacccattattagagaaagctattca 168  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||     
T  2566 aatctaaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcc 2467  T
Q  169 cacccttaccttaggttagatg 190  Q
    |||||||||||||  |||||||    
T  2466 cacccttaccttaaattagatg 2445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 13893 - 14002
Alignment:
Q  73 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    ||||| ||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||    
T  13893 tctaaacctaattcccaaaacatcaaaactaacaacaacttcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacc 13992  T
Q  173 cttaccttag 182  Q
    ||||||||||    
T  13993 cttaccttag 14002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 18749 - 18627
Alignment:
Q  73 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatta-tacaacccattattagagaaagctattcacac 171  Q
    ||||| ||||||| | | ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||| || |||    
T  18749 tctaaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtcccac 18650  T
Q  172 ccttaccttaggttagatgatcg 194  Q
    ||||||||||| |||||||||||    
T  18649 ccttaccttagattagatgatcg 18627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 59821 - 59695
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  |||||||||||||||||||||| ||| |||||| ||||| |||| ||| |||||||||||||| |||||||||| ||||||||||    
T  59821 acatcaatttttatattaattcattggattacctactatttcaacaatcaaattgcaatataaacctaatttctataatatcaaaactatcaacaactac 59722  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    || ||||||||||||||||||||||||    
T  59721 aaagttaaaccctttttcagaattata 59695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 8853 - 8700
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaa--ggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    ||||||||||||||||||||||||||||||||| ||| ||||  |||| ||||| |||| ||||| ||||||||||||||||||| |||||| || ||||    
T  8853 taaccctaatttctataacatcaaaactaacaa-aacaacaataggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacc 8755  T
Q  173 cttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctgcttctcc 228  Q
    |||||||||| ||||||||||| ||||| |||| |  |||||||||||| ||||||    
T  8754 cttaccttagattagatgatcggaaggttctacag-gttctcttctctggttctcc 8700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 19154 - 19272
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctt 175  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |  ||||||||||| || || |||||||    
T  19154 aacccttatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 19253  T
Q  176 accttaggttagatgatcg 194  Q
    || |||| |||||| ||||    
T  19254 acgttagattagatcatcg 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 19115 - 19160
Alignment:
Q  83 atttctataacatcaaaactaacaacaactacaaggttaaaccctt 128  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  19115 atttctataacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 127501 - 127332
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gtta 121  Q
    |||| |||||||| ||| ||||||||||||| |||||| || ||  |||  |||||||||| |||||||||||||||||||||| ||| ||||   ||||    
T  127501 ttacgttaattcaatggtttacctactctttcaacaatcaattttgcaaagtaaccctaatctctataacatcaaaactaacaa-aacaacaacatgtta 127403  T
Q  122 aaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||| |||| ||||| |||||| ||||||||||||||||||| || |||||||||||||| |||||||||    
T  127402 aacccctttttagaatcatacaatccattattagagaaagctagtcccacccttaccttagattagatgat 127332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 6395 - 6510
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 205  Q
    |||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||||| ||  ||||||||||||| ||   |||||||||||| ||||    
T  6395 aacaactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttagattgattgatcgcaaggttctac 6494  T
Q  206 cgctttctcttctctg 221  Q
    ||||||||||||||||    
T  6495 cgctttctcttctctg 6510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 61961 - 61835
Alignment:
Q  71 aatctaaccctaatttctata----acatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctatt 166  Q
    |||||||||||||||||||||    |||||||||||||||||||||||||||||||| || ||||||||||||||||||  |  ||||||||||| || |    
T  61961 aatctaaccctaatttctatatataacatcaaaactaacaacaactacaaggttaaatcc-ttttcagaattatacaacttagaattagagaaagttagt 61863  T
Q  167 cacacccttaccttaggttagatgatcg 194  Q
    | |||||||||||||| |||||||||||    
T  61862 ctcacccttaccttagattagatgatcg 61835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 3107 - 3257
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttt 130  Q
    |||||||||| ||||||||| |||| |||||||||||| |||| ||| ||||| ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  3107 taattcattgaattacctacactttcaacaattaaattgcaatttaaacctaacttctataacatcaaaactatcaacaactacaaaattaaaccctttt 3206  T
Q  131 tcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||| |||||||  || ||| |||| |||| | || || ||||||||||||||    
T  3207 tcataattata-tactcatgattaaagaaggttagtcccacccttaccttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 5578 - 5698
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttt--tcagaattatacaacccattattagagaaagctattcacacc 172  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| || ||||    
T  5578 aaccctaatt-ctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 5676  T
Q  173 cttaccttaggttagatgatcg 194  Q
    |||||||||  |||||||||||    
T  5677 cttaccttaaattagatgatcg 5698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 19801 - 19921
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| |||||||||||||||||||||| ||| ||  |||    
T  19801 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaatctagtcctacc 19899  T
Q  173 cttaccttaggttagatgatcg 194  Q
    |||||||||| |||||||||||    
T  19900 cttaccttagattagatgatcg 19921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 192
Target Start/End: Original strand, 5340 - 5517
Alignment:
Q  21 aattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatttctataacatcaaaactaaca--acaactacaa 116  Q
    |||||||| |||||||||| || ||||||||||||| |||||| || || ||| |  || ||||||||||  |  ||||||| |||||  ||||| ||||    
T  5340 aattattagcttaattcatcggtttacctactctttcaacaataaattttaatttcaaaacctaatttctcaacaatcaaaattaacataacaacaacaa 5439  T
Q  117 ggtt--aaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
     | |  ||||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||| |||||||||    
T  5440 cgatgtaaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttagattagatgat 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 11590 - 11681
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||| |||||||||  || || |||||||| ||||  |||||||||||    
T  11590 aacaacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatcttacattagatgatcg 11681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 16993 - 17118
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  |||||||||||||||||||||||||| |||||| ||||| |||  ||| |||||||||||||| ||| |||||| ||||||||||    
T  16993 acatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaattaaacctaatttctataatatc-aaactatcaacaactac 17091  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    || |||||||||||||| |||||||||    
T  17092 aaagttaaaccctttttaagaattata 17118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 26524 - 26649
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  |||||||||||||||||||||||||| |||||| ||||| |||  ||| |||||||||||||| ||| |||||| ||||||||||    
T  26524 acatcaatttttatattaattcattggattacctactctttcaacaatcaaattgcaaattaaacctaatttctataatatc-aaactatcaacaactac 26622  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    || |||||||||||||| |||||||||    
T  26623 aaagttaaaccctttttaagaattata 26649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 10893 - 11011
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacc 172  Q
    ||||||||||||||||||||||||||||||||| ||| ||||   |||||||||||||| ||||| |||||||||||||||||||||||||| |  ||||    
T  10893 taaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccttttt-agaatcatacaacccattattagagaaagctagttccacc 10990  T
Q  173 cttaccttaggttagatgatc 193  Q
    |||||||||  ||||||||||    
T  10991 cttaccttatattagatgatc 11011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 29208 - 29316
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaattcaatctaaccctaatttctataacatcaaaa-ctaacaacaactacaaggttaaac 124  Q
    |||| |||||||| ||| ||||||||||||| |||||||||||||||| ||||| |||| ||| ||||||||||| |||  |||||||||||||||||||    
T  29208 ttacgttaattcaatggtttacctactctttcaacaattaaattcaatataaccttaatctctttaacatcaaaacctattaacaactacaaggttaaac 29307  T
Q  125 cctttttca 133  Q
    |||||||||    
T  29308 cctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 28600 - 28726
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| |||  |||||||||| |||||||||| |||| |||||| ||||| |||| ||||||||||| ||||||||  |||||||  |||||||||    
T  28600 acatcaatttttatgttaattcattagattacctacactttcaacaatcaaatttcaatttaaccctaattcctataacaataaaactattaacaactac 28699  T
Q  115 aaggttaaaccctttttcagaattata 141  Q
    ||| |||||| ||||||||||||||||    
T  28700 aagattaaacgctttttcagaattata 28726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 182
Target Start/End: Complemental strand, 38593 - 38441
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaattc-aatctaac-cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctt 128  Q
    ||||||||||||||||||||| |||| |||||| |||||  ||| |||  ||||| |||||||||||||||||||  |||||||||||  ||||||||||    
T  38593 ttaattcattggattacctacactttcaacaatcaaattgtaatttaaaacctaacttctataacatcaaaactattaacaactacaaaattaaaccctt 38494  T
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||||||||||  || ||| |||| |||| | || |||||||||||||||||    
T  38493 tttcagaattata-tactcatgattaaagaaggttagtcacacccttaccttag 38441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 71 - 131
Target Start/End: Complemental strand, 23992 - 23932
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttt 131  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23992 aatctaaccctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 2221 - 2300
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  2221 aacaacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 2130 - 2173
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaat 63  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||    
T  2130 caattattaccttagttcatcggattacctactctttcaacaat 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 8799 - 8913
Alignment:
Q  106 aacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctac 205  Q
    |||| |||||||||||||||||||||||| |||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| ||||    
T  8799 aacatctacaaggttaaaccctttttcaggattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctac 8897  T
Q  206 cgctttctcttctctg 221  Q
    ||||||||||||||||    
T  8898 cgctttctcttctctg 8913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 182
Target Start/End: Original strand, 40047 - 40160
Alignment:
Q  70 caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaattatacaacccattattagagaaagctattc 167  Q
    |||| ||||||||||||||||||||||||||||||||| ||| ||||   ||||||||| |||| ||||| ||||||||||||||||||||||| || ||    
T  40047 caatttaaccctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagttagtc 40145  T
Q  168 acacccttaccttag 182  Q
     || |||||||||||    
T  40146 gcatccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 11271 - 11147
Alignment:
Q  71 aatctaaccctaatttctataacatcaaaactaacaacaactacaaggt--taaaccctttttcagaattatacaacccattattagagaaagctattca 168  Q
    |||||||||||||||| |||||||||||||||||||| ||| ||||  |  ||||||| |||| ||||| |||||||||||||||||||||||||| ||     
T  11271 aatctaaccctaatttatataacatcaaaactaacaa-aacaacaacatgataaacccctttttagaatcatacaacccattattagagaaagctagtcc 11173  T
Q  169 cacccttaccttaggttagatgatcg 194  Q
    || ||||||||||  |||| ||||||    
T  11172 catccttaccttaaattaggtgatcg 11147  T

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Target: scaffold0385 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 293 - 437
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| |||| | | |  || |||| ||||   || || ||||||    
T  293 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacata-cttatgattaaagaagattaatctcaccct 390  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  391 taccttaggttagatgatcgcaaggttctaccgctttctcttttctg 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 8731 - 8907
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatttctataacatcaaaactaacaa--caactaca 115  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| || || ||| |  || ||||||||||  || ||||||| ||||||  |||| |||    
T  8731 caattattaccttaattcatctgattacctactctttcaacaatcaattttaatttcaaaacctaatttctcaaaaatcaaaattaacaaaacaacaaca 8830  T
Q  116 aggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
     | | || ||| |||||||||| |||||| ||||||||||| ||||||| || |||||||| ||||| |||||||||    
T  8831 tgttaaacccccttttcagaatcatacaatccattattagataaagctagtcccacccttaacttagattagatgat 8907  T

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Target: scaffold0039 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 9999 - 9890
Alignment:
Q  109 aactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgc 208  Q
    |||||||||| |||||||||||||||||||| | | |  || |||| |||| | || || |||||||||||||||||||||||||||||||| |||||||    
T  9999 aactacaaggctaaaccctttttcagaattacata-cttatgattaaagaaggttagtcccacccttaccttaggttagatgatcgcaaggttctaccgc 9901  T
Q  209 tttctcttctc 219  Q
    |||||||||||    
T  9900 tttctcttctc 9890  T

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Target: scaffold0004 (Bit Score: 54; Significance: 4e-22; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 192
Target Start/End: Complemental strand, 66150 - 66061
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    ||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||  ||||||||    
T  66150 aacaacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttagaatagatgat 66061  T

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Target: scaffold0004; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 328318 - 328249
Alignment:
Q  151 attagagaaagctattcacacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctct 220  Q
    ||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  328318 attagagaaagttagtcccacccttaccttaggttagatgatcgcaaggttctaccgctttctcttctct 328249  T

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Target: scaffold0004; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 190
Target Start/End: Original strand, 75849 - 75998
Alignment:
Q  44 ttacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccctttttcagaatta 139  Q
    ||||||||||||| |||||| || ||  |||  || ||||||||  ||||||||||||||||| || ||| ||||   ||||||||| |||| ||||| |    
T  75849 ttacctactctttcaacaatcaactttgcaaattatccctaattcttataacatcaaaactaataa-aacaacaacatgttaaacccctttttagaatca 75947  T
Q  140 tacaacccattattagagaaagctattcacacccttaccttaggttagatg 190  Q
    |||||||||||||| |||||||||| || |||||||||||||| |||||||    
T  75948 tacaacccattattggagaaagctagtcccacccttaccttagattagatg 75998  T

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Target: scaffold0004; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 72986 - 73148
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaacaactacaag--gttaaaccc 126  Q
    |||||||| ||| ||||||||||||| |||||| || ||  |||  |||||||||||  |||||||| |||||||| || ||| ||||   |||||||||    
T  72986 ttaattcaatggcttacctactctttcaacaatcaactttgcaaattaaccctaattcttataacataaaaactaataa-aacaacaacatgttaaaccc 73084  T
Q  127 tttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatg 190  Q
     |||| ||||| ||||||| ||||||||||||||| || || |||||||||||||  |||||||    
T  73085 ctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttacattagatg 73148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 111344 - 111413
Alignment:
Q  113 acaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||| ||||||||| |||| ||||| ||||||||||||||||||||||||||  | ||||||||||||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttag 111413  T

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Target: scaffold0004; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 66241 - 66205
Alignment:
Q  20 caattattaccttaattcattggattacctactcttt 56  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  66241 caattattaccttagttcatcggattacctactcttt 66205  T

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Target: scaffold0139 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 23503 - 23587
Alignment:
Q  98 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||||||||| ||||||| ||||| |||| ||| |||||||||||||||||||||||||||| ||  |||||||||||||    
T  23503 aaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 40268 - 40204
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattat 140  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  40268 aaccctaacttctataacatcaaaactatcaacaactacatggttaaacccttttttagaattat 40204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 4369 - 4510
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||||||||||| |||||| | |||||| | |  || |||| |||| | || || ||||||    
T  4369 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccttttttcgggattatata-cttatgattaaagaaggttagtcccaccct 4466  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttct 218  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  4467 taccttaggttagatgatcgcaaggttgtaccgctttctcttct 4510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 12256 - 12288
Alignment:
Q  75 taaccctaatttctataacatcaaaactaacaa 107  Q
    ||||| |||||||||||||||||||||||||||    
T  12256 taaccttaatttctataacatcaaaactaacaa 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 13 - 135
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatct-aaccctaatttctataacatcaaaactaacaacaacta 113  Q
    ||||||||| |||  ||||||| |||||||||||||||||| |||||| || || |||| | |||||||| |||||||||||||||||||  ||||||||    
T  13 acatcaattcttatgttaattctttggattacctactctttcaacaatcaattttcaattttaaccctaacttctataacatcaaaactattaacaacta 112  T
Q  114 caaggttaaaccctttttcagaa 136  Q
    |||  | ||||||||||||||||    
T  113 caaattaaaaccctttttcagaa 135  T

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Target: scaffold0730 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 192
Target Start/End: Complemental strand, 6665 - 6494
Alignment:
Q  21 aattattaccttaattcattggattacctactcttttaacaattaaattcaatct--aaccctaatttctataacatcaaaactaacaacaactacaagg 118  Q
    |||||||||||||||||||   |||||||||||||| |||||| || || ||| |  || ||||||||||  |  ||||||| |||||| ||| ||| |     
T  6665 aattattaccttaattcatctaattacctactctttcaacaatcaattttaatttcaaaacctaatttctcaacaatcaaaattaacaa-aacaacatg- 6568  T
Q  119 ttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgat 192  Q
    |||||||| |||||||||| ||||||||||||||||||||||| || || | || ||||||||| |||||||||    
T  6567 ttaaaccccttttcagaatcatacaacccattattagagaaaggtagtcccgcctttaccttagattagatgat 6494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 7679 - 7513
Alignment:
Q  16 acatcaattattaccttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactac 114  Q
    ||||||||| | || ||||||||||||||| |||||  ||  |||||| ||||| ||||  || ||||| ||||||||||||||||||| |||||||||     
T  7679 acatcaattttcacgttaattcattggatttcctacatttccaacaatcaaatttcaattaaaacctaacttctataacatcaaaactatcaacaactat 7580  T
Q  115 aaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||  ||||||||||||||||||| |||  || ||| |||| |||| | || || ||||||||||||||    
T  7579 aaaattaaaccctttttcagaatcata-tactcataattaaagaaggttagtcccacccttaccttag 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 361 - 420
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 164  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  361 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagcta 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 35264 - 35185
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||| || | |||||||||||||| ||||||||||||||||||||||| |||||||| |  ||||||||||||||    
T  35264 aacaacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 35636 - 35490
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaattc--aatctaaccctaatttctataac-atcaaaa-ctaacaacaactacaaggttaaaccct 127  Q
    |||||||||| |||| ||||| |||||||||| ||||||  |||| || |||||||||| |||| ||||||| | ||||||||| || | ||||||||||    
T  35636 taattcattgaattatctact-ttttaacaatcaaattctaaatcaaaacctaatttctctaaccatcaaaatcaaacaacaacaaccatgttaaaccct 35538  T
Q  128 ttttcagaattatacaacccattattagagaaagctattcacacccttac 177  Q
     ||||||||||||| ||||||| ||||||| |||||| || |||||||||    
T  35537 atttcagaattata-aacccatcattagag-aagctaatcccacccttac 35490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 35413 - 35341
Alignment:
Q  103 aacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttac 177  Q
    ||||||||| || | |||||||||| ||||||||||||| ||||||| ||||||| |||||| || |||||||||    
T  35413 aacaacaacaaccatgttaaaccctatttcagaattata-aacccatcattagag-aagctaatcccacccttac 35341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 509 - 660
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    ||||||||||| ||||||||| |||| |||||| ||||| ||||  || ||||| |||||||||||||||| || ||||||| ||||  ||||||| |||    
T  509 ttaattcattgaattacctacactttcaacaatcaaattgcaattcaaacctaacttctataacatcaaaattatcaacaacaacaaaattaaaccattt 608  T
Q  130 ttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    || |||||||||  || ||| |||| |||| | || || ||||||||||||||    
T  609 ttaagaattata-gactcatgattaaagaaggttagtcccacccttaccttag 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 43889 - 43786
Alignment:
Q  79 cctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 176  Q
    |||||||||| ||| |||||||| |||| |||||| || | |||||||||| ||||||||||||| ||||||||||||||| |||||| || ||||||||    
T  43889 cctaatttctctaatcatcaaaatctaataacaacaaccatgttaaaccctatttcagaattata-aacccattattagag-aagctagtcccaccctta 43792  T
Q  177 ccttag 182  Q
    ||||||    
T  43791 ccttag 43786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 182
Target Start/End: Complemental strand, 39245 - 39094
Alignment:
Q  32 taattcattggattacctactcttttaacaattaaattcaa-tctaaccctaatttctataac-atcaaaa-ctaacaacaactacaaggttaaaccctt 128  Q
    |||||||||| |||| ||||| ||| |||||| || | ||| || || |||||||||| |||  ||||||| | ||||||||| || | |||| ||| |     
T  39245 taattcattgaattatctactttttcaacaatcaattccaaatcaaaacctaatttctctaaagatcaaaatcaaacaacaacaaccatgttacaccgta 39146  T
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||| ||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  39145 tttcataattata-aacccattattagag-aagctagtcccacccttaccttag 39094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 164
Target Start/End: Original strand, 10572 - 10630
Alignment:
Q  105 caacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagcta 164  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||    
T  10572 caacaactacaatgttaaaccctttttcagaattatacaa-ccatctttagagaaagcta 10630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 33402 - 33546
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccct 174  Q
    |||||||||| ||| ||||||||||| ||  |||||||||| | |||||||||||||||| |||| | | |  || |||| |||| | || || ||||||    
T  33402 aaccctaatt-ctacaacatcaaaacctattaacaactacacgtttaaaccctttttcaggattaaata-cttatgattaaagaaggttagtcccaccct 33499  T
Q  175 taccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||| ||   |||||||||||| ||||||||||||||||||||    
T  33500 taccttagattgattgatcgcaaggttctaccgctttctcttctctg 33546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 1264 - 1313
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaacc 125  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  1264 aacccttatttctataacatcaaaactatcaacaactataaggttaaacc 1313  T

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Target: scaffold0462; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 6770 - 6819
Alignment:
Q  76 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaacc 125  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  6770 aacccttatttctataacatcaaaactatcaacaactataaggttaaacc 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 1174 - 1270
Alignment:
Q  34 attcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctt 128  Q
    |||||||||||||||||  |||| |||||  ||||| ||  || || |||||||||  ||||| ||||| || ||||||||||||| ||||||||||    
T  1174 attcattggattacctagactttcaacaaccaaattgaaattcaaaacctaatttcattaacaacaaaattatcaacaactacaagattaaaccctt 1270  T

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Target: scaffold0462; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 6680 - 6776
Alignment:
Q  34 attcattggattacctactcttttaacaattaaattcaa--tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctt 128  Q
    |||||||||||||||||  |||| |||||  ||||| ||  || || |||||||||  ||||| ||||| || ||||||||||||| ||||||||||    
T  6680 attcattggattacctagactttcaacaaccaaattgaaattcaaaacctaatttcattaacaacaaaattatcaacaactacaagattaaaccctt 6776  T

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Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 5718 - 5615
Alignment:
Q  79 cctaatttctataa-catcaaaa-ctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacaccctta 176  Q
    |||||||||| ||| |||||||| | ||||||||| || | |||||| ||| ||||||||||||| ||||||||||||||| |||||| || ||||||||    
T  5718 cctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaatcctatttcagaattata-aacccattattagag-aagctagtcccaccctta 5621  T
Q  177 ccttag 182  Q
    ||||||    
T  5620 ccttag 5615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 57013 - 57065
Alignment:
Q  169 cacccttaccttaggttagatgatcgcaaggtcctaccgctttctcttctctg 221  Q
    |||||||||||||||||| |||||||| |||| ||||| ||||||||||||||    
T  57013 cacccttaccttaggttatatgatcgccaggttctaccactttctcttctctg 57065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 68789 - 68725
Alignment:
Q  118 gttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    ||||||||| |||| ||||| ||| ||||||||||||||||||| || || ||||||||||||||    
T  68789 gttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttag 68725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 31831 - 31938
Alignment:
Q  31 ttaattcattggattacctactcttttaacaattaaatt-caatctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttt 129  Q
    |||||||||||||||  |||| |||| || ||| ||||| ||||  || ||||| ||||| |||||||||||||  |||||||| ||  |||||||||||    
T  31831 ttaattcattggattttctacactttcaaaaatcaaatttcaattaaaacctaacttctacaacatcaaaactattaacaactataaaattaaacccttt 31930  T
Q  130 ttcagaat 137  Q
    ||||||||    
T  31931 ttcagaat 31938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 221
Target Start/End: Original strand, 49680 - 49822
Alignment:
Q  79 cctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctattcacacccttacc 178  Q
    ||||| ||||||||||||||||||| ||||||  | ||  ||||||||||||||||||||||   || ||| |||| |||| | || || ||||||||||    
T  49680 cctaacttctataacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattat-ggactcatgattaaagaaggttagtcccacccttacc 49778  T
Q  179 ttaggttagatgatcgcaaggtcctac-cgctttctcttctctg 221  Q
    |||| || | ||||  |||||| ||||  |||||||||||||||    
T  49779 ttagattggttgattacaaggttctacaagctttctcttctctg 49822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 438 - 377
Alignment:
Q  73 tctaaccctaatttctataa-catcaaaactaacaacaactacaaggttaaaccctttttca 133  Q
    |||||||||||||||| ||| | ||||| ||||| ||||||||||||||||||| |||||||    
T  438 tctaaccctaatttctctaatcctcaaacctaacgacaactacaaggttaaaccatttttca 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 21430 - 21479
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| |||||    
T  21430 caattattaccttaattcatcagattacctactctttcaacaatgaaatt 21479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 12585 - 12520
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| ||||| |||||||||||| | |||||||||||    
T  12585 tttcagaattatacaacttagaattagagaaagttattcccacccttaccttggattagatgatcg 12520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 9915 - 9964
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    ||||||||||||||||||||  ||||||||||||||| |||||| |||||    
T  9915 caattattaccttaattcatcagattacctactctttcaacaatcaaatt 9964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 22012 - 22061
Alignment:
Q  20 caattattaccttaattcattggattacctactcttttaacaattaaatt 69  Q
    ||||| ||||||||||||||  ||||||||||||||| |||||| |||||    
T  22012 caattcttaccttaattcatcagattacctactctttcaacaatcaaatt 22061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 31994 - 32059
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||  |||||||||||    
T  31994 tttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcg 32059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 37301 - 37366
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||  |||||||||||    
T  37301 tttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattagatgatcg 37366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 77687 - 77751
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 193  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||| ||||||||||    
T  77687 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattagatgatc 77751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 12381 - 12464
Alignment:
Q  26 ttaccttaattcattggattacctactcttttaacaattaaatt--caatctaaccctaatttctataacatcaaaactaacaa 107  Q
    |||| |||||||| ||  ||||||||||||| |||||| || ||  |||   ||||||||||||||||||||||||||||||||    
T  12381 ttacgttaattcaatgatttacctactctttcaacaatcaattttgcaaataaaccctaatttctataacatcaaaactaacaa 12464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 174169 - 174232
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  174169 aaccctaatt-ctacaacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 174232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 143611 - 143663
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttacctta 181  Q
    |||||||||||||||||  |  ||||||||||| || ||||||||||||||||    
T  143611 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 1205 - 1270
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 1270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 2555 - 2620
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||| ||| |||||||||||    
T  2555 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccgtagattagatgatcg 2620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 2889 - 2942
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttag 182  Q
    |||||||||||||||||| |  ||||||||||| || || ||||||||||||||    
T  2889 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 2942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 79049 - 79114
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  79049 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaattagatgatcg 79114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 78237 - 78172
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 78172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 24183 - 24118
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatcg 194  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  |||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatcg 24118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 520 - 456
Alignment:
Q  129 tttcagaattatacaacccattattagagaaagctattcacacccttaccttaggttagatgatc 193  Q
    |||||||||||||||||  |  ||||||||||| || || |||||||||||||  ||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaattagatgatc 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 9011 - 9074
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  |||||||||||| |||||||||||||||| ||||    
T  9011 aaccctaatt-ctacaacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 9074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 10550 - 10487
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  ||||||||||| ||||||||||||||||| ||||    
T  10550 aaccctaatt-ctacaacatcaaaacctattaacaactacaatgttaaaccctttttcaggatta 10487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 8085 - 8129
Alignment:
Q  90 taacatcaaaac-taacaacaactacaaggttaaaccctttttca 133  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||    
T  8085 taacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 62666 - 62729
Alignment:
Q  76 aaccctaatttctataacatcaaaac-taacaacaactacaaggttaaaccctttttcagaatta 139  Q
    |||||||||| ||| ||||||||||| ||  |||||| |||||||||||||||||||||| ||||    
T  62666 aaccctaatt-ctacaacatcaaaacctattaacaaccacaaggttaaaccctttttcaggatta 62729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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