View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9939_high_3 (Length: 415)
Name: NF9939_high_3
Description: NF9939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9939_high_3 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 330; Significance: 0; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 63 - 400
Target Start/End: Original strand, 39726364 - 39726701
Alignment:
| Q |
63 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
162 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39726364 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatctcggtcgtatc |
39726463 |
T |
 |
| Q |
163 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39726464 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
39726563 |
T |
 |
| Q |
263 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39726564 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
39726663 |
T |
 |
| Q |
363 |
agaccctcaactactcttcaagataacagcaccctacc |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39726664 |
agaccctcaactactcttcaagataacagcaccctacc |
39726701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 63 - 400
Target Start/End: Original strand, 38987651 - 38987982
Alignment:
| Q |
63 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
162 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38987651 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatctcggtcgtatc |
38987750 |
T |
 |
| Q |
163 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
262 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38987751 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggagga------gaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
38987844 |
T |
 |
| Q |
263 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38987845 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
38987944 |
T |
 |
| Q |
363 |
agaccctcaactactcttcaagataacagcaccctacc |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
38987945 |
agaccctcaactactcttcaagataacagcagcctacc |
38987982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 63 - 363
Target Start/End: Original strand, 39879760 - 39880060
Alignment:
| Q |
63 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
162 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39879760 |
cgccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtatt |
39879859 |
T |
 |
| Q |
163 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
262 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39879860 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccattt |
39879959 |
T |
 |
| Q |
263 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39879960 |
tgatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaaca |
39880059 |
T |
 |
| Q |
363 |
a |
363 |
Q |
| |
|
| |
|
|
| T |
39880060 |
a |
39880060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 64 - 400
Target Start/End: Original strand, 40418230 - 40418560
Alignment:
| Q |
64 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
163 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40418230 |
gccaaaaaatattgtttagctgatgctgtggttgctcgtgtgaaagatattggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
40418329 |
T |
 |
| Q |
164 |
taaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccatttt |
263 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
40418330 |
taaaacccggtgaccatgctcttggttatgacctgtctgg------aggagaaggaggagctgacaccaacatcaatatcaaccttcctgctgccatttt |
40418423 |
T |
 |
| Q |
264 |
gatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaa |
363 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40418424 |
gatcaccaagattagttatgccgaagagaatggtagagttgttgctcttcatgataagtgggaatctgattatcaactcttcttcaatgatctacaacaa |
40418523 |
T |
 |
| Q |
364 |
gaccctcaactactcttcaagataacagcaccctacc |
400 |
Q |
| |
|
||| || |||| |||||||| ||| |||| |||||| |
|
|
| T |
40418524 |
gacactaaactcctcttcaacgtaagagcagcctacc |
40418560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 64 - 366
Target Start/End: Original strand, 39168793 - 39169098
Alignment:
| Q |
64 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
163 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||| |
|
|
| T |
39168793 |
gccaaaaaatatcggttagctgatgccgtggttgctcgtgtggaagattttggaaataatgacacaacttttcaaatcaaaactcatctaggtcatattt |
39168892 |
T |
 |
| Q |
164 |
taaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccatttt |
263 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||||| | || || |||||||||| ||||||| | |||| | ||||||||||||| ||||| |
|
|
| T |
39168893 |
taaaatccggtgactatgctcttggttatgacttgtctggacgtaaagaaggaggaggagctaacaccaatatcaatggcgaccttcctgctgcaatttt |
39168992 |
T |
 |
| Q |
264 |
gatcagcaagattagttatgccgaagtgaatggtaga---gttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaa |
360 |
Q |
| |
|
||| | ||||| |||||||| |||| ||||||||| ||||||| ||| ||| ||||||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
39168993 |
gattaccaagagtagttatgatgaagaaaatggtagaattgttgttgttgttgagggtaagtgggaatctgattatcaactctttttaaaagatctacaa |
39169092 |
T |
 |
| Q |
361 |
caagac |
366 |
Q |
| |
|
|||||| |
|
|
| T |
39169093 |
caagac |
39169098 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 3299480 - 3299620
Alignment:
| Q |
64 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga---cacaacttttcaaatcaggactcatcttggtcgta |
160 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3299480 |
gccaaaaaatatcgtttagctgatgccatggttgctcgtgtgaaagatattggaaataataatcacacaacttttcaaatcaagactcatcttggtcgta |
3299579 |
T |
 |
| Q |
161 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3299580 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
3299620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 3392373 - 3392513
Alignment:
| Q |
64 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga---cacaacttttcaaatcaggactcatcttggtcgta |
160 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3392373 |
gccaaaaaatatcgtttagctgatgccatggttgctcgtgtgaaagatattggaaataataatcacacaacttttcaaatcaagactcatcttggtcgta |
3392472 |
T |
 |
| Q |
161 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3392473 |
ttttaaaacccggtgaccatgctcttggttatgacctgtct |
3392513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 67 - 208
Target Start/End: Original strand, 39399809 - 39399950
Alignment:
| Q |
67 |
aaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattttaa |
166 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39399809 |
aaaaaataccgtttagctgatgccgtggttgctcgtgtggaaaattttggaaataatgacacaacttttcaaatcaggactcatcttggtcatattttaa |
39399908 |
T |
 |
| Q |
167 |
aacccggtgaccatgctcttggttatgacctgtctggaggag |
208 |
Q |
| |
|
|| |||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
39399909 |
aatccggtgactatgctcttggttatgacttgtctggaggag |
39399950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 64 - 208
Target Start/End: Complemental strand, 1163824 - 1163680
Alignment:
| Q |
64 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga-cacaacttttcaaatcaggactcatcttggtcgtatt |
162 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||||| ||||||| |||||||||| | |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1163824 |
gccaaaaaatatcgtttagctaatgccatagttgctcgtgtcaaagatattggaaataataatcaca-cttttcaaatcaggactcatcttggtcgtatt |
1163726 |
T |
 |
| Q |
163 |
ttaaaacccggtgaccatgctcttggttatgacctgtctggaggag |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
1163725 |
ttaaaacccggtgaccatgctcttggttatgacctgcctgaaggag |
1163680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 1849912 - 1850059
Alignment:
| Q |
64 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatga---cacaacttttcaaatcaggactcatcttggtcgta |
160 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |
|
|
| T |
1849912 |
gccaaaaaatatcgtttagctaatgccatagttgctcgtgtgaaagatattggaaataataatcacacaacttttcaaatcaggactcatcttagtcgta |
1850011 |
T |
 |
| Q |
161 |
ttttaaaacccggtgaccatgctcttggttatgacctgtctggaggag |
208 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
1850012 |
ttttaaaacctggtgaccatgctcttggttatgacctgcctgaaggag |
1850059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 244 - 381
Target Start/End: Original strand, 3299639 - 3299779
Alignment:
| Q |
244 |
aaccttcctgctgccattttgatcagcaagattagttatgccgaagtg---aatggtagagttgttgctgtcaaggataagtgggaatctgattatcaac |
340 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3299639 |
aaccttcctgctgccattttgatcaccaaaattagttatgccgaagaggagaatggtagagttgttgctgttcaggataagtgggaatctgattatcaac |
3299738 |
T |
 |
| Q |
341 |
tcttcttcaatgatctacaacaagaccctcaactactcttc |
381 |
Q |
| |
|
||||||| || ||||||||||||||| || |||| |||||| |
|
|
| T |
3299739 |
tcttcttaaaagatctacaacaagacactaaactcctcttc |
3299779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 244 - 381
Target Start/End: Original strand, 3392532 - 3392672
Alignment:
| Q |
244 |
aaccttcctgctgccattttgatcagcaagattagttatgccgaagtg---aatggtagagttgttgctgtcaaggataagtgggaatctgattatcaac |
340 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3392532 |
aaccttcctgctgccattttgatcaccaaaattagttatgccgaagaggagaatggtagagttgttgctgttcaggataagtgggaatctgattatcaac |
3392631 |
T |
 |
| Q |
341 |
tcttcttcaatgatctacaacaagaccctcaactactcttc |
381 |
Q |
| |
|
||||||| || ||||||||||||||| || |||| |||||| |
|
|
| T |
3392632 |
tcttcttaaaagatctacaacaagacactaaactcctcttc |
3392672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 1163639 - 1163549
Alignment:
| Q |
291 |
gaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaagaccctcaactactcttc |
381 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||| |||||| |
|
|
| T |
1163639 |
gaatggtagagttgttcctgttcaggataagtgggaatctggttatcaactcttcttaaaagatctacaacaagaccctaaactcctcttc |
1163549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 381
Target Start/End: Original strand, 1850100 - 1850190
Alignment:
| Q |
291 |
gaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaagaccctcaactactcttc |
381 |
Q |
| |
|
||||||||||||| || |||| |||||||||||||||||||||||||||||||||| || ||| |||||||||||||| |||| |||||| |
|
|
| T |
1850100 |
gaatggtagagttattcctgttcaggataagtgggaatctgattatcaactcttcttaaaagatttacaacaagaccctaaactcctcttc |
1850190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 39879711 - 39879741
Alignment:
| Q |
14 |
aggtggtggaggagaacaagaaggagaagga |
44 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
39879711 |
aggtggtggaggagaacaagaaggagaagga |
39879741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 40102315 - 40102213
Alignment:
| Q |
93 |
ggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattttaaaacccggtgaccatgctcttggttat |
192 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||| | ||| | |||| ||||||||| ||| | |||| ||| |||||||||||| |||||||| |
|
|
| T |
40102315 |
ggttgctcgtgtgaaagattttggaaagaatgacacgagatttaatatcaagactcatctgggttatcttttgaaatttggtgaccatgcttttggttat |
40102216 |
T |
 |
| Q |
193 |
gac |
195 |
Q |
| |
|
||| |
|
|
| T |
40102215 |
gac |
40102213 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 39400042 - 39400074
Alignment:
| Q |
315 |
ggataagtgggaatctgattatcaactcttctt |
347 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
39400042 |
ggataagtggcaatctgattatcaactcttctt |
39400074 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 64 - 383
Target Start/End: Complemental strand, 25912429 - 25912113
Alignment:
| Q |
64 |
gccaaaaaatatcgtttagctgatgctgtggttgctcgtgtgaaagatactggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattt |
163 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25912429 |
gccaaaaaatatcgtttagctgatgatgtggttgctcgtgtgaaagatattggaaataatgacacaacttttcaaatcaggactcatcttggtcgtattc |
25912330 |
T |
 |
| Q |
164 |
taaaacccggtgaccatgctcttggttatgacctgtctggaggagtaggagaaggaggagctgacaccaacaccaataacaaccttcctgctgccatttt |
263 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
25912329 |
taaaacccgatgaccatgctcttggttatgacctgtctagaggag---gagaaggaggagctaacaccaacaccaataacaaccttcatgctgccatttt |
25912233 |
T |
 |
| Q |
264 |
gatcagcaagattagttatgccgaagtgaatggtagagttgttgctgtcaaggataagtgggaatctgattatcaactcttcttcaatgatctacaacaa |
363 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| ||| |
|
|
| T |
25912232 |
gatcaccaagattagttatgccgaagagaatggtagagttgttgctgttcaggataagtgggaatctgattatcaactcttcttaaattatctacagcaa |
25912133 |
T |
 |
| Q |
364 |
gaccctcaactactcttcaa |
383 |
Q |
| |
|
|||||| |||| ||||||| |
|
|
| T |
25912132 |
gaccctaaactgatcttcaa |
25912113 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 44444838 - 44444772
Alignment:
| Q |
129 |
aacttttcaaatcaggactcatcttggtcgtattttaaaacccggtgaccatgctcttggttatgac |
195 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
44444838 |
aacttttcaaatcaagactcatcttggtcgtattttaaaacctggtgactatgctcttggttatgac |
44444772 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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