View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9939_low_16 (Length: 212)
Name: NF9939_low_16
Description: NF9939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9939_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 43126246 - 43126039
Alignment:
| Q |
1 |
ttctaagcatgtctttttcatctcctcaagttgaatccagcaccgaattctcacctatccctcaacaagatcaagatcaatcccatattaataacaatga |
100 |
Q |
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| T |
43126246 |
ttctaagcatgtctttttcatctcctcaagttgaatccaacaccgaattctcacctatccctcaacaagatcaagatcaatcccatattaataacaatga |
43126147 |
T |
|
| Q |
101 |
tcatgggcacattcatgtcaataatatttataaccgtcacatagttatagagccgattgaagaacgttttgattgggattccttagtaataatgctacgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43126146 |
tcatgggcacattcatgtcaataatatttataaccgtcacatagttatagagccgattgaagaacgttttgattgggattccttagtaataatgctacgt |
43126047 |
T |
|
| Q |
201 |
ttggcctt |
208 |
Q |
| |
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|||||||| |
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|
| T |
43126046 |
ttggcctt |
43126039 |
T |
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