View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9943_low_13 (Length: 209)
Name: NF9943_low_13
Description: NF9943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9943_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 1608592 - 1608422
Alignment:
| Q |
21 |
agggcttatgtggtttagttgatttagacatgtatgtttgtcacaaatgtattttctttactactcaagattggagtttgatgaagtcagaaagaatata |
120 |
Q |
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| T |
1608592 |
agggcttatgtggtttagttgatttaggcatgtatgtttgtcacaaatgtattttctttactactcaaaattggagtttgatgaagtcagaaagaatata |
1608493 |
T |
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| Q |
121 |
tctgtgcaaaatttgatattttgttgcaaaaatgttaaacttctcctgttctttgcattgacagtttatct |
191 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
1608492 |
tctgtgcaaaatttgatattttgttgcaaaaaagttaaacttctcctgttctttgcattgacagtttatct |
1608422 |
T |
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