View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9950_high_9 (Length: 206)
Name: NF9950_high_9
Description: NF9950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9950_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 28711734 - 28711904
Alignment:
| Q |
26 |
ctacgtcggtggatgtatatttttgcttctcaagtcggtgactgttaattgatctatcaatattaaaagatcagttttatttttactcattattctgaac |
125 |
Q |
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| T |
28711734 |
ctacgtcggtggatgtatatttttgcttctcaagtcggtgaatgttaattgatctatcaatattaaaagatcagttttatttttactcattattctgaac |
28711833 |
T |
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| Q |
126 |
aaaagttggttagagtttgaacattaattaattaccgttttaaacaagaatgatatttttcttcttctgtg |
196 |
Q |
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| T |
28711834 |
aaaagttggttagagtttgaacattaattaattactgttttaaacaagaatgatttttttcttcttctgtg |
28711904 |
T |
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