View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9951_high_13 (Length: 272)
Name: NF9951_high_13
Description: NF9951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9951_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 53331662 - 53331404
Alignment:
| Q |
1 |
caagcatggttcacttcccccttggccctccacgtgcctcaacatctgagtttgaagacttgagtgcaagaatggctttataaaatggatcaatttgcct |
100 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53331662 |
caagcatggttcacttcccccttggccctccatgtgcctcaacatctgagtttgaagacttgagtgcaagaatggctttataaaatggatcaatttgcct |
53331563 |
T |
|
| Q |
101 |
cccaatattttagaataacattatgataaactggtaatagagcagtgcaacaaggcgacatttaaaggctatatatttaagtagagataacaaacaataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53331562 |
cccaatattttagaataacattatgataaactggtaatagagcagtgcaacaaggcgacatttaaaggctatatatttaagtagagataacaaacaataa |
53331463 |
T |
|
| Q |
201 |
ttgatctcccaagttaacttaatcaaaatatatggatgctaacaagttaacttccccct |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53331462 |
ttgatctcccaagttaacttaatcaaaatatatggatgctaacaagttaacttccccct |
53331404 |
T |
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