View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9951_high_18 (Length: 237)

Name: NF9951_high_18
Description: NF9951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9951_high_18
NF9951_high_18
[»] chr3 (22 HSPs)
chr3 (1-224)||(46236934-46237157)
chr3 (15-137)||(5156097-5156219)
chr3 (15-145)||(5160119-5160248)
chr3 (158-224)||(54140938-54141004)
chr3 (147-218)||(357835-357905)
chr3 (157-224)||(24748954-24749021)
chr3 (157-224)||(10769769-10769836)
chr3 (157-224)||(37600174-37600241)
chr3 (157-225)||(50661566-50661634)
chr3 (157-216)||(29775184-29775243)
chr3 (157-214)||(38928053-38928110)
chr3 (15-61)||(45902882-45902928)
chr3 (15-137)||(46479642-46479764)
chr3 (185-225)||(27243113-27243153)
chr3 (15-63)||(51943816-51943864)
chr3 (157-224)||(43657040-43657107)
chr3 (16-131)||(46473787-46473902)
chr3 (15-145)||(46526576-46526706)
chr3 (15-145)||(45883886-45884016)
chr3 (16-130)||(46490568-46490682)
chr3 (84-137)||(51942982-51943035)
chr3 (81-137)||(46549204-46549260)
[»] chr4 (14 HSPs)
chr4 (157-224)||(16178652-16178719)
chr4 (37-145)||(15555856-15555964)
chr4 (157-224)||(44832532-44832599)
chr4 (157-224)||(51206112-51206179)
chr4 (169-218)||(13070015-13070064)
chr4 (157-217)||(41278662-41278722)
chr4 (157-224)||(37315629-37315696)
chr4 (183-224)||(25719183-25719224)
chr4 (157-224)||(30866976-30867043)
chr4 (169-224)||(39016732-39016787)
chr4 (157-224)||(47237785-47237852)
chr4 (187-224)||(19447200-19447237)
chr4 (184-224)||(2088736-2088776)
chr4 (157-221)||(40812109-40812173)
[»] chr5 (10 HSPs)
chr5 (157-224)||(42224635-42224702)
chr5 (157-224)||(24915124-24915191)
chr5 (157-224)||(17568746-17568813)
chr5 (157-224)||(24990955-24991022)
chr5 (157-218)||(13456209-13456270)
chr5 (155-224)||(40971495-40971564)
chr5 (157-224)||(26072172-26072239)
chr5 (147-218)||(34818261-34818331)
chr5 (157-218)||(868211-868272)
chr5 (147-224)||(32050376-32050452)
[»] chr2 (13 HSPs)
chr2 (157-224)||(42182958-42183025)
chr2 (157-224)||(28898081-28898148)
chr2 (157-224)||(1110267-1110334)
chr2 (147-224)||(37228568-37228644)
chr2 (147-224)||(33746955-33747031)
chr2 (157-224)||(4964717-4964784)
chr2 (161-224)||(15508983-15509046)
chr2 (157-216)||(31395489-31395548)
chr2 (157-224)||(37719881-37719948)
chr2 (157-218)||(6315733-6315794)
chr2 (88-136)||(20144470-20144518)
chr2 (88-136)||(20169256-20169304)
chr2 (88-136)||(20358982-20359030)
[»] chr1 (12 HSPs)
chr1 (157-224)||(11135808-11135875)
chr1 (167-224)||(14094055-14094112)
chr1 (157-224)||(11430510-11430576)
chr1 (147-218)||(29418556-29418627)
chr1 (157-218)||(50773155-50773216)
chr1 (147-224)||(13388372-13388450)
chr1 (157-224)||(32848627-32848694)
chr1 (157-224)||(41918064-41918131)
chr1 (157-218)||(24436511-24436572)
chr1 (147-208)||(41095644-41095704)
chr1 (148-218)||(28109943-28110011)
chr1 (168-214)||(43832348-43832394)
[»] chr7 (13 HSPs)
chr7 (157-224)||(45909525-45909592)
chr7 (158-224)||(13919849-13919915)
chr7 (147-224)||(17354562-17354638)
chr7 (167-224)||(22786220-22786277)
chr7 (157-217)||(19840929-19840989)
chr7 (157-224)||(19494383-19494450)
chr7 (157-224)||(25428523-25428590)
chr7 (157-224)||(26703484-26703551)
chr7 (157-224)||(14759712-14759779)
chr7 (157-218)||(21963174-21963235)
chr7 (157-216)||(31959860-31959919)
chr7 (157-223)||(25980819-25980885)
chr7 (148-218)||(26459068-26459137)
[»] chr6 (8 HSPs)
chr6 (157-224)||(19090259-19090326)
chr6 (157-224)||(35128767-35128834)
chr6 (147-216)||(10060936-10061004)
chr6 (157-218)||(12794858-12794919)
chr6 (157-215)||(19737479-19737537)
chr6 (155-224)||(373468-373537)
chr6 (169-224)||(6992327-6992382)
chr6 (167-224)||(6531352-6531409)
[»] chr8 (12 HSPs)
chr8 (157-218)||(23142859-23142920)
chr8 (157-218)||(33417757-33417818)
chr8 (147-215)||(7599457-7599524)
chr8 (156-224)||(28211929-28211997)
chr8 (172-216)||(43026368-43026412)
chr8 (157-224)||(1205896-1205963)
chr8 (157-218)||(902417-902478)
chr8 (147-224)||(35689549-35689625)
chr8 (157-224)||(34303482-34303549)
chr8 (157-218)||(12212169-12212230)
chr8 (157-218)||(12456597-12456658)
chr8 (157-214)||(25915108-25915167)
[»] scaffold0054 (1 HSPs)
scaffold0054 (157-224)||(30957-31024)
[»] scaffold0099 (1 HSPs)
scaffold0099 (147-224)||(27382-27460)


Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 46236934 - 46237157
Alignment:
Q  1 cgtttcttataggaggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  46236934 cgtttcttataggaggtcatgaagggaactttgacggagctaccatttaaaaggtaacagtcactgtctttcgttaccgaagtatcaaacttctcattcc 46237033  T
Q  101 atgttcctttaaagtacattgcatttgcaaatatgagtttggttaccactcacttattttattggatgaaatcaatgtagaacctacattttggaaatgg 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  46237034 atattcctttaaagtacattgcatttgcaaatatgagtttggttaccactcacctattttattggatgaaatcaatgtaggacctacattttagaaatgg 46237133  T
Q  201 aacccacataaagtggtgtgacat 224  Q
    |||||||||||||||||| |||||    
T  46237134 aacccacataaagtggtgggacat 46237157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 5156219 - 5156097
Alignment:
Q  15 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaag 114  Q
    ||||||||||||||| ||||| ||||| ||||| ||||||| |||||||  ||||||||||  | ||  ||||||||||||| |||||| ||||||||||    
T  5156219 ggtcatgaagggaaccttgaccgagctgccattcaaaaggtgaaaatcatagtctttcgttttcaaaacatcaaacttctcactccatgctcctttaaag 5156120  T
Q  115 tacattgcatttgcaaatatgag 137  Q
    || | |||||| ||||| |||||    
T  5156119 tagagtgcattagcaaagatgag 5156097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 5160248 - 5160119
Alignment:
Q  15 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaag 114  Q
    ||||||||||||||| ||||| ||||| ||||| ||||||| |||||||  ||||||||||  ||||  ||||||||| ||| |||||| ||||||||||    
T  5160248 ggtcatgaagggaaccttgactgagct-ccattcaaaaggtgaaaatcatagtctttcgttttcgaaacatcaaacttatcactccatgctcctttaaag 5160150  T
Q  115 tacattgcatttgcaaatatgagtttggtta 145  Q
    || | |||||| ||||| |||||| ||||||    
T  5160149 tagagtgcattagcaaagatgagtctggtta 5160119  T

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Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 54140938 - 54141004
Alignment:
Q  158 tttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| |||||    
T  54140938 tttattggatgaaatcaatgtagaacctacactttgaaaatggaacccacgtaaagtggtgggacat 54141004  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 357905 - 357835
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| ||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||    
T  357905 cactcactt-ttttattggatgaaatcaatgtaggtactacactttggaaatggaacccacataaagtggtg 357835  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 24748954 - 24749021
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||    
T  24748954 ttttattggatgaaatcaatgtaggacctacactttagaaatggaacccacataaaatggtgggacat 24749021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 10769769 - 10769836
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||| |||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||| |||||    
T  10769769 ttttatttgatgaaatcaatgtaggacctacactttagaaatggaacccatataaagtggtgggacat 10769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 37600174 - 37600241
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||| ||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||    
T  37600174 ttttattggttgaattcaatgtaggacctacactttagaaatggaacccacataaagtggtgggacat 37600241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 50661566 - 50661634
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacatg 225  Q
    ||||||||| | |||||||||| |  | |||||||||||||||||||||||||||||||||| ||||||    
T  50661566 ttttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacatg 50661634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 29775184 - 29775243
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtgg 216  Q
    ||||||||| ||||||||| |||| ||||||| |||||||||||||||||||||| ||||    
T  29775184 ttttattgggtgaaatcaaggtaggacctacactttggaaatggaacccacataatgtgg 29775243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 38928053 - 38928110
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagt 214  Q
    ||||||||| |||||||||||||  ||||||| ||||||||||||||||| |||||||    
T  38928053 ttttattgggtgaaatcaatgtaagacctacactttggaaatggaacccatataaagt 38928110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 45902928 - 45902882
Alignment:
Q  15 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaat 61  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||    
T  45902928 ggtcatgaagggaaccttgactgagctaccatttagaaggtaaaaat 45902882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 46479764 - 46479642
Alignment:
Q  15 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaag 114  Q
    ||||||||||||||| ||||| | ||||||||| ||||||| ||| ||   ||||| ||||   |||| ||||||||| |||||||| | |||||| |||    
T  46479764 ggtcatgaagggaaccttgactgggctaccattcaaaaggtgaaactcgtagtcttccgtttttgaagcatcaaacttatcattccacgctcctttgaag 46479665  T
Q  115 tacattgcatttgcaaatatgag 137  Q
    || | |||||| ||||| |||||    
T  46479664 tatagtgcattggcaaagatgag 46479642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 27243153 - 27243113
Alignment:
Q  185 tacattttggaaatggaacccacataaagtggtgtgacatg 225  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  27243153 tacactttggaaatggaacccacataaagtggtgggacatg 27243113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 51943864 - 51943816
Alignment:
Q  15 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatca 63  Q
    ||||||||||||||| ||||| ||||||||||||| ||||| |||||||    
T  51943864 ggtcatgaagggaaccttgactgagctaccatttagaaggtgaaaatca 51943816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 43657040 - 43657107
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||| | ||||| ||||||   ||||||| |||||||||||||| |||||||||||||| |||||    
T  43657040 ttttatttggtgaaaacaatgtgagacctacactttggaaatggaactcacataaagtggtgggacat 43657107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 46473902 - 46473787
Alignment:
Q  16 gtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagt 115  Q
    ||||| |||| ||| || || ||||| ||||| | |||||||||||||  |||||| |||   |||| ||||| ||||| |||||||| ||||||||| |    
T  46473902 gtcataaaggaaaccttaactgagctgccattgagaaggtaaaaatcatagtcttttgttgttgaagcatcaatcttctgattccatgatcctttaaaat 46473803  T
Q  116 acattgcatttgcaaa 131  Q
    ||| |||||| |||||    
T  46473802 acaatgcattagcaaa 46473787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 46526576 - 46526706
Alignment:
Q  15 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttccttt-aaa 113  Q
    ||||||||||||||| ||||| ||||| |||||| |||||| |||||||  || ||| |||  ||||| |  ||||||||  ||||||| |||||| |||    
T  46526576 ggtcatgaagggaaccttgactgagctgccattt-aaaggtgaaaatcatagttttttgttctcgaagcaggaaacttctttttccatgctcctttaaaa 46526674  T
Q  114 gtacattgcatttgcaaatatgagtttggtta 145  Q
     |||| ||| |||||||| |||||| ||||||    
T  46526675 atacagtgcgtttgcaaagatgagtctggtta 46526706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 45883886 - 45884016
Alignment:
Q  15 ggtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaag 114  Q
    ||||||||||||||||||||| || ||||||||   ||  | ||||||   || ||| |||  ||||| |||||||   | |||||||| ||| ||||||    
T  45883886 ggtcatgaagggaactttgactgaactaccattatgaatatgaaaatcgtagtattttgttttcgaaggatcaaacggttgattccatgctcccttaaag 45883985  T
Q  115 tacattgcatttgcaaatatgagtttggtta 145  Q
    |||| |||||| |||||||||||| ||||||    
T  45883986 tacaatgcattagcaaatatgagtctggtta 45884016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 46490682 - 46490568
Alignment:
Q  16 gtcatgaagggaactttgacggagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagt 115  Q
    |||||||||||||| || |  ||||| ||||| ||||||| |||||||  ||||||||||   |||| ||||||||| ||||||||   |||||| ||||    
T  46490682 gtcatgaagggaaccttaattgagctgccattcaaaaggtgaaaatcatagtctttcgtttttgaagcatcaaacttatcattccacactcctttgaagt 46490583  T
Q  116 acattgcatttgcaa 130  Q
    | | |||||| ||||    
T  46490582 atagtgcattagcaa 46490568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 51943035 - 51942982
Alignment:
Q  84 atcaaacttctcattccatgttcctttaaagtacattgcatttgcaaatatgag 137  Q
    |||||||||||||||||||| |||| |||||||||  ||||| ||||| |||||    
T  51943035 atcaaacttctcattccatgctcctctaaagtacaacgcattagcaaagatgag 51942982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 46549204 - 46549260
Alignment:
Q  81 agtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaatatgag 137  Q
    ||||| ||||||||||| ||||| |||||| ||||| | |||||||||||| |||||    
T  46549204 agtattaaacttctcatcccatgctcctttgaagtataatgcatttgcaaagatgag 46549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 16178719 - 16178652
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  16178719 ttttattggatgaaatcaatgtagaacctacactttggaaatggaacccacataaagtggtgggacat 16178652  T

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Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 15555964 - 15555856
Alignment:
Q  37 gagctaccatttaaaaggtaaaaatcactgtctttcgttaccgaagtatcaaacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 136  Q
    ||||||||||| | ||||| |||||||  ||||||||||   |||| ||||||||||| || ||||  |||||||||||||| |||||||||||| ||||    
T  15555964 gagctaccattgagaaggtgaaaatcatagtctttcgttttggaagcatcaaacttctgataccatagtcctttaaagtacagtgcatttgcaaagatga 15555865  T
Q  137 gtttggtta 145  Q
    || ||||||    
T  15555864 gtctggtta 15555856  T

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Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 44832599 - 44832532
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| |||| || ||||||||||||| ||||||||| ||||| |||||    
T  44832599 ttttattgggtgaaatcaatgtaggacctgcactttggaaatggaatccacataaaatggtgggacat 44832532  T

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Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 51206179 - 51206112
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||||||||| || |||||    
T  51206179 ttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagtgatgggacat 51206112  T

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Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 13070064 - 13070015
Alignment:
Q  169 aaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  13070064 aaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtg 13070015  T

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Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 41278662 - 41278722
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggt 217  Q
    ||||||||| ||| || ||||||| ||| |||||||| |||||||||||||||||||||||    
T  41278662 ttttattgggtgatatgaatgtaggaccaacattttgaaaatggaacccacataaagtggt 41278722  T

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Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 37315696 - 37315629
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||||||||||  |||| ||||| |||  ||||||||||||| |||||    
T  37315696 ttttattgggtgaaatcaatgtagaacctacgctttgaaaatgaaacttacataaagtggtgggacat 37315629  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 25719183 - 25719224
Alignment:
Q  183 cctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  25719183 cctacattttggaaatgaaacccacataaagtggtgggacat 25719224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 30866976 - 30867043
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||| | ||||| |||||| | | ||||| |||| |||||||||||||||||||||||| |||||    
T  30866976 ttttattaggtgaaaacaatgtgggatctacactttgaaaatggaacccacataaagtggtgggacat 30867043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 39016787 - 39016732
Alignment:
Q  169 aaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||  ||||| |||||||||||||||||| |||| ||||| |||||    
T  39016787 aaatcaatgtagatactacactttggaaatggaacccacgtaaaatggtgggacat 39016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 47237785 - 47237852
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||||||||  |||||||||||||| |||| ||||| |||  | ||||||||||| |||||    
T  47237785 ttttattggatgaaattcatgtagaacctacactttgaaaatgaaacttatataaagtggtgggacat 47237852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 19447237 - 19447200
Alignment:
Q  187 cattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  19447237 cattttgaaaatggaacccacataaagtggtgggacat 19447200  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 2088736 - 2088776
Alignment:
Q  184 ctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||| ||||||||||||| ||||||||||||||| |||||    
T  2088736 ctacactttggaaatggaatccacataaagtggtgggacat 2088776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 40812173 - 40812109
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtga 221  Q
    ||||||||||| |||| ||||||  ||||||| |||||||||| ||||||| | || ||||||||    
T  40812173 ttttattggataaaattaatgtatgacctacactttggaaatgaaacccacgttaaatggtgtga 40812109  T

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Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 42224635 - 42224702
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  42224635 ttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacat 42224702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 24915191 - 24915124
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| || |||| |||| |||||||||||||||||||||||| |||||    
T  24915191 ttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacat 24915124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 17568746 - 17568813
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| ||||| || |||||||||| |||||    
T  17568746 ttttattggatgaaattaatgtaggacctacactttggaaatagaacctacctaaagtggtgggacat 17568813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 24991022 - 24990955
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| || |||| |||| |||||||||| ||||||||||||| |||||    
T  24991022 ttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacctacataaagtggtgggacat 24990955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 13456209 - 13456270
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||| | ||||||||||||||  |||||| |||| |||||||||||||||||| |||||    
T  13456209 ttttattaggtgaaatcaatgtaggtcctacactttgaaaatggaacccacataaaatggtg 13456270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 40971495 - 40971564
Alignment:
Q  155 tattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||| | |||||||||||  ||||||| |||||||||| |||  ||||||||||||| |||||    
T  40971495 tattttattgggtaaaatcaatgtaagacctacactttggaaatgaaacttacataaagtggtgggacat 40971564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 26072239 - 26072172
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| ||||| |||||| | ||||||| |||||||||| |  ||||||||||||||| |||||    
T  26072239 ttttattgggtgaaaacaatgtgggacctacactttggaaatgaattccacataaagtggtgagacat 26072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 34818331 - 34818261
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| ||||||| | | |||||||||||| ||||| | ||| |||||||||||||||||||| ||||    
T  34818331 cactcactt-ttttatttggtaaaatcaatgtaggacctatactttagaaatggaacccacataaagcggtg 34818261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 868211 - 868272
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    |||||| ||||||||| ||||| || |||||| ||| |||||| | ||||||||||||||||    
T  868211 ttttatgggatgaaattaatgtggatcctacaatttagaaatgaatcccacataaagtggtg 868272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 32050452 - 32050376
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| ||||||||| |||||||||||||    | ||| |||| ||||||||||||||||||||| || |||||    
T  32050452 cactcactt-ttttattgggtgaaatcaatgtatgttccacactttgaaaatggaacccacataaagtgatgagacat 32050376  T

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Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 42183025 - 42182958
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  42183025 ttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacat 42182958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 28898081 - 28898148
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||||||||||||| | ||||| |||||||||| |||||||||||||||||| |||||    
T  28898081 ttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtggtgggacat 28898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 1110334 - 1110267
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| || || | ||||||||||||||||||||||||||||| |||||    
T  1110334 ttttattgggtgaaatcaatgtaggacatatactttggaaatggaacccacataaagtggtgggacat 1110267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 37228644 - 37228568
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| ||||||||| |||||||||||||| |||| || |||| ||| |||||||||||||||||||| |||||    
T  37228644 cactcactt-ttttattgggtgaaatcaatgtaggacctgcactttgaaaacggaacccacataaagtggtgggacat 37228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 33746955 - 33747031
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| ||||||||||||||| |||||| ||||||| | ||| ||||||||||| | ||||||||||| |||||    
T  33746955 cactcactt-ttttattggatgaaaacaatgtggaacctatactttagaaatggaaccaatataaagtggtgggacat 33747031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 4964717 - 4964784
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||| | |||||||||| ||||||| |||| ||||| || ||||||||||||||| |||||    
T  4964717 ttttattggataagatcaatgtaggacctacactttgaaaatgaaatccacataaagtggtgggacat 4964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 15509046 - 15508983
Alignment:
Q  161 attggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||||| ||| ||||| |||||    
T  15509046 attgggtgaaatcaatgtaggatctacactttggaaatggaacccacaaaaaatggtgggacat 15508983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 31395489 - 31395548
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtgg 216  Q
    ||||||||| |||||| ||||||| ||||||| | ||||||||||| |||||||||||||    
T  31395489 ttttattgggtgaaataaatgtaggacctacactatggaaatggaatccacataaagtgg 31395548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 37719881 - 37719948
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||||||||||||| || |||| ||| ||||||||| |||| |||| ||||| |||||    
T  37719881 ttttattggatgaaatcaatgtaggacatacactttagaaatggaatccacttaaaatggtgggacat 37719948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 6315794 - 6315733
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||||  |||| ||||||| ||||||| ||||||||||||||| | |||||||||||    
T  6315794 ttttattggaaaaaattaatgtaggacctacactttggaaatggaacctatataaagtggtg 6315733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 20144518 - 20144470
Alignment:
Q  88 aacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 136  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||| ||||    
T  20144518 aacttctcattccatgctcctataaagtacaatgcattagcaaagatga 20144470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 20169256 - 20169304
Alignment:
Q  88 aacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 136  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||| ||||    
T  20169256 aacttctcattccatgctcctataaagtacaatgcattagcaaagatga 20169304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 20359030 - 20358982
Alignment:
Q  88 aacttctcattccatgttcctttaaagtacattgcatttgcaaatatga 136  Q
    |||||||||||||||| |||| ||||||||| |||||| ||||| ||||    
T  20359030 aacttctcattccatgctcctataaagtacaatgcattagcaaagatga 20358982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 11135875 - 11135808
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  11135875 ttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacat 11135808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 14094055 - 14094112
Alignment:
Q  167 tgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  14094055 tgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacat 14094112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 11430576 - 11430510
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  11430576 ttttattgg-tgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacat 11430510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 29418627 - 29418556
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| ||||||||| |||||||||||||| | ||||| ||||||||| |||| ||||||||||||||    
T  29418627 cactcactttttttattgggtgaaatcaatgtaggatctacactttggaaatagaactcacataaagtggtg 29418556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 50773155 - 50773216
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| | |||| ||||||| ||||| |||||||||||||||||||||||||||||||    
T  50773155 ttttattgggtaaaattaatgtaggacctatattttggaaatggaacccacataaagtggtg 50773216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 13388372 - 13388450
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccac--ataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||||||||||||| ||||||| |||| ||||| |||||||  ||||||||||| |||||    
T  13388372 cactcactt-ttttattggatgaaatcaatgtagtacctacactttgaaaatgaaacccacatataaagtggtgagacat 13388450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 32848627 - 32848694
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||| ||||||||| ||||||| |||| |||||||| ||||||||||||||| |||||    
T  32848627 ttttattggttgaattcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacat 32848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 41918131 - 41918064
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| | |||||||||||| ||||||| |||| |||||||| ||||||||||||||| |||||    
T  41918131 ttttattgggtaaaatcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacat 41918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 24436511 - 24436572
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| |||||||||||||| ||| ||| |||| |||| |||||||||||||||||||    
T  24436511 ttttattgggtgaaatcaatgtaggacccacactttgaaaatagaacccacataaagtggtg 24436572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 41095644 - 41095704
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccaca 208  Q
    ||||||||||||| ||||| |||||||||||||| ||||||| |||| ||||||||||||||    
T  41095644 cactcacttattt-attgggtgaaatcaatgtaggacctacactttgaaaatggaacccaca 41095704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 28110011 - 28109943
Alignment:
Q  148 actcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    |||||||| |||||||||||||||||| | ||| | ||||| |||| |||||||||||||||||| |||||    
T  28110011 actcactt-ttttattggatgaaatcattctaggatctacactttg-aaatggaacccacataaaatggtg 28109943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 43832394 - 43832348
Alignment:
Q  168 gaaatcaatgtagaacctacattttggaaatggaacccacataaagt 214  Q
    ||||||||||||| | ||||| |||||||||| ||||||||||||||    
T  43832394 gaaatcaatgtaggatctacactttggaaatgaaacccacataaagt 43832348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 45909592 - 45909525
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| | |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  45909592 ttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaagtggtgggacat 45909525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 224
Target Start/End: Complemental strand, 13919915 - 13919849
Alignment:
Q  158 tttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||    
T  13919915 tttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacat 13919849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 17354562 - 17354638
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| ||||||||| | |||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||    
T  17354562 cactcactt-ttttattgggtaaaatcaatgtaggacctacactttggaaatagaacccacataaagtggtgggacat 17354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 22786277 - 22786220
Alignment:
Q  167 tgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  22786277 tgaaatcaatgtataacctacactttggaaatggaacccacataaagtggtgagacat 22786220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 19840929 - 19840989
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggt 217  Q
    ||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  19840929 ttttattgggtgaaatcaatataggacctacactttggaaatggaacccacataaagtggt 19840989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 19494383 - 19494450
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| | ||||| |||| |||||||||||||||||||||||| |||||    
T  19494383 ttttattgggtgaaatcaatgtaggatctacactttgaaaatggaacccacataaagtggtgggacat 19494450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 25428523 - 25428590
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||| |||||||||||| | ||||| |||||||||| |||||||||||||||||| |||||    
T  25428523 ttttattggataaaatcaatgtaggatctacactttggaaatgtaacccacataaagtggtgggacat 25428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 26703484 - 26703551
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||||||||||| |||||    
T  26703484 ttttattgggtgaaataaatgtaggacctacactttagaaatggaacccacataaagtggtgagacat 26703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 14759779 - 14759712
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| ||||| || |||||||||| |||||    
T  14759779 ttttattggatgaaattaatgtaggacctacactttggaaatagaacctacctaaagtggtgggacat 14759712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 21963174 - 21963235
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| |||||||||||||| | ||||| |||||||||||||| |||||||| |||||    
T  21963174 ttttattgggtgaaatcaatgtaggatctacactttggaaatggaactcacataaaatggtg 21963235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 31959860 - 31959919
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtgg 216  Q
    ||||||||  |||||| ||||||| ||| ||| ||||||||| |||||||||||||||||    
T  31959860 ttttattgagtgaaattaatgtaggacccacactttggaaatagaacccacataaagtgg 31959919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 25980885 - 25980819
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgaca 223  Q
    |||||||||||||||||||||| ||  | |||||||||||||  | |||||||||| ||||| ||||    
T  25980885 ttttattggatgaaatcaatgtggataccacattttggaaattaaccccacataaaatggtgagaca 25980819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 26459137 - 26459068
Alignment:
Q  148 actcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    |||||||| ||||||| | | ||| |||||| | ||||||| ||| |||||||||||||||||||||||||    
T  26459137 actcactt-ttttattaggtaaaaacaatgtgggacctacactttagaaatggaacccacataaagtggtg 26459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 19090259 - 19090326
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  19090259 ttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacat 19090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 35128767 - 35128834
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||    
T  35128767 ttttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacat 35128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 10061004 - 10060936
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtgg 216  Q
    ||||||||| ||||||||| ||| |||||||||| ||||||| |||| ||||||||||||||||||||||    
T  10061004 cactcactt-ttttattgggtgagatcaatgtaggacctacactttgaaaatggaacccacataaagtgg 10060936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 12794858 - 12794919
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    |||||||||||||||| ||||||| |||||||||||| ||||| ||| ||||||||||||||    
T  12794858 ttttattggatgaaattaatgtaggacctacattttgaaaatgaaactcacataaagtggtg 12794919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 19737479 - 19737537
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtg 215  Q
    ||||||||| | |||||||||||| ||||||| |||||||||| |||||||||||||||    
T  19737479 ttttattggctcaaatcaatgtaggacctacactttggaaatgaaacccacataaagtg 19737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 373537 - 373468
Alignment:
Q  155 tattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||||||| |||||||||||| ||||||  |||| |||||||| |||||||||||| || |||||    
T  373537 tattttattggataaaatcaatgtaggacctaccctttgaaaatggaatccacataaagtgctgggacat 373468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 6992327 - 6992382
Alignment:
Q  169 aaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||||| ||||||| |||||||||| ||| |||||||||||||| |||||    
T  6992327 aaatcaatgtaggacctacactttggaaatgaaactcacataaagtggtgagacat 6992382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 6531352 - 6531409
Alignment:
Q  167 tgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||| ||||||| ||||||| || ||||||||||| |||||||||| ||| |||||    
T  6531352 tgaaattaatgtaggacctacacttcggaaatggaactcacataaagtagtgggacat 6531409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 23142859 - 23142920
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| ||||| |||||| ||||||| | |||||||||||||||||||||||||||||    
T  23142859 ttttattgggtgaaaacaatgtggaacctagactttggaaatggaacccacataaagtggtg 23142920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 33417818 - 33417757
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||  |||||| ||||||| ||||||| |||||||||| ||||||||||||||||||    
T  33417818 ttttattgagtgaaattaatgtaggacctacactttggaaatgaaacccacataaagtggtg 33417757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 7599457 - 7599524
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtg 215  Q
    ||||||||| ||||||||  | |||||||||||| ||||||| |||||||| |||||||||||||||||    
T  7599457 cactcactt-ttttattgagtaaaatcaatgtaggacctacactttggaaaaggaacccacataaagtg 7599524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 28211929 - 28211997
Alignment:
Q  156 attttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    |||||||||| |||||||||||||| ||||| | |||  |||||||||||||||||| ||||| |||||    
T  28211929 attttattgggtgaaatcaatgtaggacctatactttaaaaatggaacccacataaaatggtgagacat 28211997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 43026412 - 43026368
Alignment:
Q  172 tcaatgtagaacctacattttggaaatggaacccacataaagtgg 216  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  43026412 tcaatgtaggacctacactttggaaatggaacccacataaagtgg 43026368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 1205963 - 1205896
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||  |||||||||||||  ||||||| ||||||||| ||||||| ||||||||||| |||||    
T  1205963 ttttattgagtgaaatcaatgtaagacctacactttggaaatagaacccatataaagtggtgagacat 1205896  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 902417 - 902478
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    ||||||||| |||||||||||| || |||||  |||||||||||  ||||||||||||||||    
T  902417 ttttattgggtgaaatcaatgtggatcctacgctttggaaatgggtcccacataaagtggtg 902478  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 35689625 - 35689549
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| ||||||||| ||||| |||||| | || |||| |||| ||||||||| |||||||||||||| |||||    
T  35689625 cactcactt-ttttattgggtgaaaacaatgtgggacttacactttgaaaatggaactcacataaagtggtgggacat 35689549  T

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Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 34303482 - 34303549
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| |||||||||||||  ||||||| |||| |||| ||| ||||||| ||||||| |||||    
T  34303482 ttttattgggtgaaatcaatgtaagacctacactttgaaaatcgaagccacatagagtggtgagacat 34303549  T

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Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 12212169 - 12212230
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    |||| |||| |||||||||||| |  |||||| |||||||||||  ||||||||||||||||    
T  12212169 ttttcttgggtgaaatcaatgtgggtcctacactttggaaatgggtcccacataaagtggtg 12212230  T

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Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 12456597 - 12456658
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtg 218  Q
    |||| |||| |||||||||||| |  |||||| |||||||||||  ||||||||||||||||    
T  12456597 ttttcttgggtgaaatcaatgtgggtcctacactttggaaatgggtcccacataaagtggtg 12456658  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 25915167 - 25915108
Alignment:
Q  157 ttttattggatgaaatcaatgtagaac--ctacattttggaaatggaacccacataaagt 214  Q
    ||||||||| |||||||||||| ||||  ||||| |||| |||||||||||| |||||||    
T  25915167 ttttattgggtgaaatcaatgtggaacctctacactttgaaaatggaacccaaataaagt 25915108  T

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Target: scaffold0054 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 30957 - 31024
Alignment:
Q  157 ttttattggatgaaatcaatgtagaacctacattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||| ||| |||||||||||||||||| |||| ||| |||||||| |||||||||| ||||||    
T  30957 ttttattgggtgacatcaatgtagaacctacactttgaaaacggaacccatataaagtggtatgacat 31024  T

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Target: scaffold0099 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 27460 - 27382
Alignment:
Q  147 cactcacttattttattggatgaaatcaatgtagaaccta-cattttggaaatggaacccacataaagtggtgtgacat 224  Q
    ||||||||  ||| ||||| |||||||||||||| || || || |||| |||||||||| ||||||||||||| |||||    
T  27460 cactcactcttttaattgggtgaaatcaatgtaggacataacactttgaaaatggaacctacataaagtggtgggacat 27382  T

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