View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9951_high_19 (Length: 230)
Name: NF9951_high_19
Description: NF9951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9951_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 22626943 - 22626734
Alignment:
| Q |
1 |
aacacaaatccaatgaagatataatataaccaa-tatccaattcaatacaaacacgagcagaaacttgaaatatgcaaaaatagcttgcagggaaaacaa |
99 |
Q |
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|||| |||| ||||||||||||||||||||||| |||||||||| | | |||||||||||||||||||||| ||||||| || ||||||||||||| ||| |
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| T |
22626943 |
aacataaatgcaatgaagatataatataaccaaatatccaattcgacagaaacacgagcagaaacttgaaagatgcaaatatggcttgcagggaaatcaa |
22626844 |
T |
|
| Q |
100 |
atgatactattcaaaattcaaaactaaataaaacaatagaattgaaataacaacttcaaaacagtaaacttagcaatattgtctctttgtccattgctaa |
199 |
Q |
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||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| |
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|
| T |
22626843 |
atgatactattaaaaattcaaaactaaataaaacaatagaatagaaataacaacttcaaaacagtaaacctagcattattgtctccttgtccattgctaa |
22626744 |
T |
|
| Q |
200 |
ctttcctcca |
209 |
Q |
| |
|
|||||||||| |
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|
| T |
22626743 |
ctttcctcca |
22626734 |
T |
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