View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9951_low_30 (Length: 210)
Name: NF9951_low_30
Description: NF9951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9951_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 49207891 - 49208075
Alignment:
| Q |
5 |
cggacgtaggactattgtatattgaaaccaatcacaaagggggtaaaatactgttaaattcatacatatacctagagcttaaacttaaagtccaacctta |
104 |
Q |
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| T |
49207891 |
cggacgtaggactattgtatattgaaaccaatcacaaagggagtaaaatactgttaaattcatacatatacctagagcttaaacttaaagtccaacctta |
49207990 |
T |
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| Q |
105 |
acatctcaatatataatattctcatgacatgtatgcc-aaaaactgtaattacagcgacgtaattgaagtattactcttgttgct |
188 |
Q |
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| T |
49207991 |
acatctcaatatataatattctcattacatgtatgccaaaaaactgtaattacagcgacgtaattgaagtattactcttgttgct |
49208075 |
T |
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