View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9954_high_38 (Length: 253)
Name: NF9954_high_38
Description: NF9954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9954_high_38 |
 | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 12 - 250
Target Start/End: Complemental strand, 5165425 - 5165187
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |||||||||||||||| |
|
|
| T |
5165425 |
agcaagggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccttggcacatagacaatgtccgaaacaacaactctac |
5165326 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacg |
211 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5165325 |
ttttaccgaatggtggaatcaaaacctataatggatcaattgacgaaattcaataagattattgatgatttggcgaacgtagatgttaatctgcaagacg |
5165226 |
T |
|
| Q |
212 |
agaataaagtcttacacctactgtgtgctttaccttgat |
250 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
5165225 |
aggataaagccttacacctactgtgtgctttaccttgat |
5165187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 25942274 - 25942502
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
25942274 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttac |
25942373 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
25942374 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
25942473 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
25942474 |
aagccttacacctactgtgtgctttacct |
25942502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 13879344 - 13879572
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
13879344 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttat |
13879443 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
13879444 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
13879543 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| |||||||||| |||||||||||||| |
|
|
| T |
13879544 |
aagccttacacctattgtgtgctttacct |
13879572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 17694427 - 17694199
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||| ||||||||| | ||| |||||||||||||||||||||||| |
|
|
| T |
17694427 |
ggagactactgctgtgtctatgtggaataaacttgattaattatacataaccaagtctttggcacatagaaaatgtctgaaacaacaactctacttttat |
17694328 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || ||||||||||||| ||||| || ||| |
|
|
| T |
17694327 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctagaagacaaggata |
17694228 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
17694227 |
aagacttacacctactgtgtgctttacct |
17694199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 93 - 246
Target Start/End: Complemental strand, 22350470 - 22350319
Alignment:
| Q |
93 |
tctgaaacaacaactctacttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgta |
192 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||||| |||| ||||||||||||||| ||||| | ||||||||||||||||||||||||||| || || |
|
|
| T |
22350470 |
tctgagacaacaaatctacttttaccgaatggtggagtcaa--cctataatggagcaactgacggagttcaataagattattgatgatttggcgaacata |
22350373 |
T |
|
| Q |
193 |
gatgttaatctgcaagacgagaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
|||||||||||| |||||||| |||||| |||||||||||||| |||||||||| |
|
|
| T |
22350372 |
gatgttaatctggaagacgaggataaagccttacacctactgtatgctttacct |
22350319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 22351430 - 22351363
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacata |
85 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
22351430 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatgaccaaatctttggcacata |
22351363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 9035740 - 9035650
Alignment:
| Q |
95 |
tgaaacaacaactctacttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcg |
186 |
Q |
| |
|
|||||||||||||||||| | | | |||||||| || |||||||| | ||||||||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
9035740 |
tgaaacaacaactctactgattcaagatggtggagtctaaacctatcacaaagcaattgacgaaattcaacaagattcttg-tgatttggcg |
9035650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 20054336 - 20054108
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
20054336 |
ggagactactgttgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttac |
20054237 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
20054236 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgagcata |
20054137 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
20054136 |
aagccttacacctactgtgtgctttacct |
20054108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 22716809 - 22716581
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
22716809 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttac |
22716710 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
22716709 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
22716610 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
22716609 |
aagccttacacctactgtgtgctttacct |
22716581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 2736810 - 2737037
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
2736810 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacataggcaatttctgaaacaacaactctacttttat |
2736909 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
2736910 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
2737009 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacc |
245 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
2737010 |
aagccttacacctactgtgtgctttacc |
2737037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 39680651 - 39680879
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
39680651 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgcctgaaacaacaactctacttttat |
39680750 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | |||||||||||||||||||||||| || || |||||||||||||| |||||||| ||| |
|
|
| T |
39680751 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttgacgaacatagatgttaatctggaagacgaggata |
39680850 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| |||||||||| |||||||||||||| |
|
|
| T |
39680851 |
aagccttacacctattgtgtgctttacct |
39680879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 28457078 - 28456850
Alignment:
| Q |
19 |
gagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttacc |
118 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
28457078 |
gagactactgttgtttctatgtggaataaacttgattcattgtacatgaccaagtccttgtcacatagacaatgtctgaaacaacaattctacttttacc |
28456979 |
T |
|
| Q |
119 |
aaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataa |
218 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||| | ||||||||||||||||||||||||| | || ||||||| ||| || |||| ||| |||| |
|
|
| T |
28456978 |
gaatggtggagtcaaaacctataatggaataactgacggagttcaataagattattgatgatttggagaacatagatgtaaatatggaagatgaggataa |
28456879 |
T |
|
| Q |
219 |
agtctta-cacctactgtgtgctttacct |
246 |
Q |
| |
|
| |||| | ||||||||||| ||||||| |
|
|
| T |
28456878 |
atccttaccccctactgtgtgttttacct |
28456850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 10942092 - 10941949
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| ||||||||||| ||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||| || ||||| ||||||||||||||||||| |
|
|
| T |
10942092 |
agcaagggagactactgatgtgtctatatggaataaactagattcattgtatatgacaaagtctttggcacgtagacaatgtctgaaacaacaactctac |
10941993 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgac |
155 |
Q |
| |
|
|||||| |||||||| |||||| ||||||||||||| |||| |
|
|
| T |
10941992 |
ttttactggatggtggagtcaaaatatataatggagcaactgac |
10941949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 10947961 - 10947818
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| ||||||||||| ||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||| || ||||| ||||||||||||||||||| |
|
|
| T |
10947961 |
agcaagggagactactgatgtgtctatatggaataaactagattcattgtatatgacaaagtctttggcacgtagacaatgtctgaaacaacaactctac |
10947862 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgac |
155 |
Q |
| |
|
|||||| |||||||| |||||| ||||||||||||| |||| |
|
|
| T |
10947861 |
ttttactggatggtggagtcaaaatatataatggagcaactgac |
10947818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 44016247 - 44016013
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
44016247 |
agcaagggaaactattgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccttggcacatagacaatgtctgaaacaacaactctac |
44016148 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacg |
211 |
Q |
| |
|
||||||| ||| ||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
44016147 |
ttttaccgaatagtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacg |
44016048 |
T |
|
| Q |
212 |
agaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||| |
|
|
| T |
44016047 |
aggataaagccttacacctactgtgtgctttacct |
44016013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 25351957 - 25352185
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
25351957 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttac |
25352056 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
25352057 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
25352156 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
25352157 |
aagccttacacctactgtgtgctttacct |
25352185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 7070400 - 7070628
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
7070400 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacataggcaatgtctgaaacaacaactctacttttat |
7070499 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
7070500 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
7070599 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
7070600 |
aagccttacacctactgtgtgctttacct |
7070628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 3324363 - 3324135
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
3324363 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttat |
3324264 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
3324263 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
3324164 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| |||||||||| |||||||||||||| |
|
|
| T |
3324163 |
aagccttacacctattgtgtgctttacct |
3324135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 25406019 - 25406247
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
25406019 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttat |
25406118 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
25406119 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
25406218 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| |||||||||| |||||||||||||| |
|
|
| T |
25406219 |
aagccttacacctattgtgtgctttacct |
25406247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 248
Target Start/End: Complemental strand, 10612353 - 10612123
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
10612353 |
ggagactattgttgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttat |
10612254 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
10612253 |
caaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
10612154 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttaccttg |
248 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |
|
|
| T |
10612153 |
aagccttacacctactgtgtgctttaccttg |
10612123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 22625555 - 22625327
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||||| |
|
|
| T |
22625555 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttac |
22625456 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
22625455 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
22625356 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
22625355 |
aagccttacacctactgtgtgctttacct |
22625327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 47882470 - 47882237
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
47882470 |
agcaagggagactactgttgtgtctatgtgaaataaacttgattcattgtacatgaccaagtccttagcacatagacaatgtctgaaacaacaactctac |
47882371 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacg |
211 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||||||| | || |||||||||||||| |||||| |
|
|
| T |
47882370 |
ttttaccgaatggtggagtcaaaacctataatggagcaacagacggagttcaataagattattgatgatttggagaacatagatgttaatctggaagacg |
47882271 |
T |
|
| Q |
212 |
agaataaagtcttacacctactgtgtgctttacc |
245 |
Q |
| |
|
| |||||| ||||||||||||||| |||||||| |
|
|
| T |
47882270 |
atgataaagccttacacctactgtgggctttacc |
47882237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 29913531 - 29913303
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
29913531 |
ggagtctactgctgtgtctatgaggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttac |
29913432 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
29913431 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
29913332 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||| ||||||||||||| |
|
|
| T |
29913331 |
aagccttacacctaccgtgtgctttacct |
29913303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 10897610 - 10897838
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||| |||| ||||||||||||||||||||||||| |
|
|
| T |
10897610 |
ggaggctactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcccataggcaatgtctgaaacaacaactctacttttac |
10897709 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| |||||||||||||| |||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
10897710 |
cgaatggtggagtcaaaacctataatcgagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
10897809 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
10897810 |
aagccttacacctactgtgtgctttacct |
10897838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 22 - 246
Target Start/End: Original strand, 54189119 - 54189343
Alignment:
| Q |
22 |
actactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttaccaaa |
121 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| || |
|
|
| T |
54189119 |
actactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttaccgaa |
54189218 |
T |
|
| Q |
122 |
tggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataaagt |
221 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||| || |||||||||||||| |||||||| |||||| |
|
|
| T |
54189219 |
tggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgataatttggcgaacatagatgttaatctggaagacgaggataaagc |
54189318 |
T |
|
| Q |
222 |
cttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||||||||| |||||||||||||| |
|
|
| T |
54189319 |
cttacacctgttgtgtgctttacct |
54189343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 10098366 - 10098144
Alignment:
| Q |
23 |
ctactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttaccaaat |
122 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||||| || |
|
|
| T |
10098366 |
ctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttaccgtat |
10098267 |
T |
|
| Q |
123 |
ggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataaagtc |
222 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||| || |||||||||||||| |||||||| |||||| | |
|
|
| T |
10098266 |
ggtggagtcaaaacctataatggagcaattgacggagttcaataagattattaatgatttggcgaacatagatgttaatctggaagacgaggataaagcc |
10098167 |
T |
|
| Q |
223 |
ttacacctactgtgtgctttacc |
245 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
10098166 |
ttacacctactgtgtgctttacc |
10098144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 16458071 - 16458299
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||||| |
|
|
| T |
16458071 |
ggagactactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttac |
16458170 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| | || | ||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||| |
|
|
| T |
16458171 |
caaatggtggagtcaaaacctataatggagcaactagcggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaagata |
16458270 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
|| ||||||||||||||||||||||||| |
|
|
| T |
16458271 |
aatccttacacctactgtgtgctttacct |
16458299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 10205262 - 10205040
Alignment:
| Q |
23 |
ctactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttaccaaat |
122 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||||| || |
|
|
| T |
10205262 |
ctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttaccgtat |
10205163 |
T |
|
| Q |
123 |
ggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataaagtc |
222 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||| || |||||||||||||| |||||||| |||||| | |
|
|
| T |
10205162 |
ggtggagtcaaaacctataatggagcaactgacggagttcaataagattattaatgatttggcgaacatagatgttaatctggaagacgaggataaagcc |
10205063 |
T |
|
| Q |
223 |
ttacacctactgtgtgctttacc |
245 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
10205062 |
ttacacctactgtgtgctttacc |
10205040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 6303916 - 6304144
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
6303916 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttat |
6304015 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
6304016 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgataatttggcgaacatagatgttaatctggaagacgaggata |
6304115 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| |||||||||| |||||||||||||| |
|
|
| T |
6304116 |
aagccttacacctattgtgtgctttacct |
6304144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 161; Significance: 6e-86; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 9522330 - 9522558
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
9522330 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttat |
9522429 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
9522430 |
cgaatggtggagtcaaaacctataatggagcaactgacgaagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
9522529 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
9522530 |
aagccttacacctactgtgtgctttacct |
9522558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 14997636 - 14997868
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
14997636 |
agcaagggagactactgttgtgtctatgtggaatagacttgatt--ttgtacatgaccaagtccttggcacatagacaatgtctgaaacaacaactctac |
14997733 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacg |
211 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || ||||||| |||||| |||| | |
|
|
| T |
14997734 |
ttttaccaaatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgtaaatctggaagatg |
14997833 |
T |
|
| Q |
212 |
agaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
| |||||| |||||||||| |||||||||||||| |
|
|
| T |
14997834 |
aagataaagccttacacctattgtgtgctttacct |
14997868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 22 - 246
Target Start/End: Complemental strand, 2400796 - 2400572
Alignment:
| Q |
22 |
actactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttaccaaa |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||||| |||||||| ||||| ||||||||| ||||| |||||||||||||||||||||||||| || |
|
|
| T |
2400796 |
actactgttgtgtctatatggaataaacttaattcataatacatgactaagtctttggcacatagacaatgtctgaaacaacaactctacttttaccgaa |
2400697 |
T |
|
| Q |
122 |
tggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataaagt |
221 |
Q |
| |
|
||||||| |||||| |||||||||||||| |||| | |||||||| |||||||||||||||||| || |||||||||||||| ||||||| |||||| |
|
|
| T |
2400696 |
tggtggagtcaaaatctataatggagcaactgacagagttcaataaaattattgatgatttggcgaacatagatgttaatctggaagacgacgataaagc |
2400597 |
T |
|
| Q |
222 |
cttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
2400596 |
cttacacctactgtgtgctttacct |
2400572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 16930 - 17158
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||||| |
|
|
| T |
16930 |
ggagactactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttac |
17029 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| | || |||||||||||||| |||||||| ||| |
|
|
| T |
17030 |
cgaatggtggaatcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggtgaacatagatgttaatctggaagacgaggata |
17129 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
17130 |
aagccttacacctactgtgtgctttacct |
17158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 21034473 - 21034701
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
21034473 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatgaccaagtctttggcacatagacaatgactgaaacaacaactctacttttac |
21034572 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||| | |||| |||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
21034573 |
cgaatggtggagtcaaaacctataatggagcaactgacggagttcattaagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
21034672 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||| ||||||||||||||||||||| |
|
|
| T |
21034673 |
aagcctttcacctactgtgtgctttacct |
21034701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 33033240 - 33033473
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||||||| ||| |
|
|
| T |
33033240 |
agcaagggagactactactgtgtctatgtggaataaacttgattcattgtacatgaccaagtccttggcacatagacaatgtctgaagcaacaact-tac |
33033338 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacg |
211 |
Q |
| |
|
||||||| ||||||||| || |||| ||||||||||||| ||||| | ||||||||||||||||||||||||||| || ||||||| |||||| |||| | |
|
|
| T |
33033339 |
ttttaccgaatggtggagtcgaaacttataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgtaaatctggaagatg |
33033438 |
T |
|
| Q |
212 |
agaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||| |
|
|
| T |
33033439 |
aggataaagccttacacctactgtgtgctttacct |
33033473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 16756836 - 16756608
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
16756836 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttat |
16756737 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
16756736 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
16756637 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| |||||||||| |||||||||||||| |
|
|
| T |
16756636 |
aagccttacacctattgtgtgctttacct |
16756608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 28328513 - 28328741
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |
|
|
| T |
28328513 |
ggaggctactgctgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacagtgcctgaaacaacaactctacttttat |
28328612 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
28328613 |
cgtatggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
28328712 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
|||||||||||||| |||||||||||||| |
|
|
| T |
28328713 |
aagtcttacacctattgtgtgctttacct |
28328741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 30 - 246
Target Start/End: Original strand, 28891381 - 28891597
Alignment:
| Q |
30 |
tgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttaccaaatggtggaa |
129 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28891381 |
tgtgtctatgtggaataagcttgattcattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttaccgaatggtggag |
28891480 |
T |
|
| Q |
130 |
tcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataaagtcttacacc |
229 |
Q |
| |
|
||||||||||||||||||||| ||| | | ||||||||||||||||||||||| ||| || |||||||||||||| ||||| || |||||| |||||||| |
|
|
| T |
28891481 |
tcaaaacctataatggagcaactgaaggagttcaataagattattgatgatttcgcgaacatagatgttaatctggaagacaaggataaagccttacacc |
28891580 |
T |
|
| Q |
230 |
tactgtgtgctttacct |
246 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
28891581 |
tactgtgtgctttacct |
28891597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 30 - 238
Target Start/End: Original strand, 15945272 - 15945483
Alignment:
| Q |
30 |
tgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttaccaaatggtgg-- |
127 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
15945272 |
tgtgtctatgtggaataaacatgattcatcgtacatgaccaagtccttggcacatagacaatgtctgaaacaacaactctacttttactgaatggtggcg |
15945371 |
T |
|
| Q |
128 |
-aatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataaagtcttac |
226 |
Q |
| |
|
| |||||||||||||||||| || ||||| | ||||||||||||||||||||||||| | || ||||||| |||||| |||||||| |||||| ||||| |
|
|
| T |
15945372 |
tactcaaaacctataatggagaaactgacggagttcaataagattattgatgatttggagaacatagatgtgaatctggaagacgaggataaagccttac |
15945471 |
T |
|
| Q |
227 |
acctactgtgtg |
238 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15945472 |
acctactgtgtg |
15945483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 4819769 - 4819587
Alignment:
| Q |
64 |
atgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattca |
163 |
Q |
| |
|
||||||||||| ||||||||| ||| | |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||| | |||| |
|
|
| T |
4819769 |
atgaccaagtctttggcacatagacagtgtctgaaacaacaactctacttttatcgtatggtggagtcaaaacctataatggagcaaatgacggagttca |
4819670 |
T |
|
| Q |
164 |
ataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||||||||||| ||||||||||| || |||||||||||||| |||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
4819669 |
ataagattattaatgatttggcgaacatagatgttaatctggaagacgaggataaagacttacacctaatgtgtgctttacct |
4819587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 149; Significance: 8e-79; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 15312923 - 15313151
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
15312923 |
ggagactactgctgtgtctatgtggaataaacttgatttattatacatgaccaagtctttggcacatagacaatgtctgaaacaacaactctacttttat |
15313022 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| |||| |||| ||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| |
|
|
| T |
15313023 |
cgaatgatggagtcaaaacctataatggagcaacttacggagttcaataagattattgatgatttggcgaacatagatgttaatctggaagacgaggata |
15313122 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||| |
|
|
| T |
15313123 |
aagccttacacctactgtgtgctttacct |
15313151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 16633089 - 16633323
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
16633089 |
agcaagggagactactgatgtgtctatgtgaaataaaattgattcattgtacatgaccaagtccttggcacatacacaatgtttgaaacaacaactctac |
16633188 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacg |
211 |
Q |
| |
|
|| |||| ||||||||| |||||||| | ||||||| || ||| | | ||||||||||||||||||||||||||| || ||||| | ||| || | |||| |
|
|
| T |
16633189 |
ttataccgaatggtggagtcaaaacccacaatggagtaactgatggagttcaataagattattgatgatttggcgaacatagatttgaatttggacgacg |
16633288 |
T |
|
| Q |
212 |
agaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||| |
|
|
| T |
16633289 |
acgataaagccttacacctactgtgtgctttacct |
16633323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 4558913 - 4559068
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
4558913 |
ggagactattgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtacttggtacatagacaatgtctgaaacaacaactctacttttac |
4559012 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattat |
173 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
4559013 |
cgaatggtggagtcaaaacctataatggagcaactgacgaagttcaataagattat |
4559068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 136; Significance: 5e-71; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 25446092 - 25446319
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctacttttac |
117 |
Q |
| |
|
|||| |||||| | |||||||||||||||||||||||||||| ||||||| |||||| ||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
25446092 |
ggaggctactgctatgtctatgtggaataaacttgattcattatacatgatcaagtctttggcacatagacagtgtctgaaacaacaactctacttttat |
25446191 |
T |
|
| Q |
118 |
caaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacgagaata |
217 |
Q |
| |
|
| || |||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| || ||||||||||||| |||||||| ||| |
|
|
| T |
25446192 |
cgaaaggtggagtcaaaacctataatggagcaactgacggagttcaataagattattgatgatttggcgaacatagatgttaatctagaagacgaggata |
25446291 |
T |
|
| Q |
218 |
aagtcttacacctactgtgtgctttacc |
245 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
25446292 |
aagccttacacctactgtgtgctttacc |
25446319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 246
Target Start/End: Original strand, 10627958 - 10628192
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
10627958 |
agcaagggagactattgttgtgtctatgtggaataaacttgattcattgtgcatgaccaagtccttggcacatagacaatgtctgaaacaacaactctac |
10628057 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagacg |
211 |
Q |
| |
|
||| ||| ||||||||| |||||||| |||||||||||| ||||| | |||||||||||||||| |||||||||| ||||||| |||||| | ||| |
|
|
| T |
10628058 |
tttaaccgaatggtggagtcaaaaccgataatggagcaactgacggagttcaataagattattgttgatttggcgattatagatgtaaatctggattacg |
10628157 |
T |
|
| Q |
212 |
agaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
|| |||||| |||| |||||||||||||||||||| |
|
|
| T |
10628158 |
aggataaagccttagacctactgtgtgctttacct |
10628192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 246
Target Start/End: Complemental strand, 31782043 - 31781808
Alignment:
| Q |
12 |
agcaaaggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaatatctgaaacaacaactctac |
111 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||| |
|
|
| T |
31782043 |
agcaagggagactattgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtcctggacacatagacaatgtctgaaacaacaactctac |
31781944 |
T |
|
| Q |
112 |
ttttaccaaatggtggaatc-aaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgtagatgttaatctgcaagac |
210 |
Q |
| |
|
||||||| |||||| || || |||||| |||||| ||||| ||||| ||||||||||||||||||||||||||||| || ||||||| ||| || ||||| |
|
|
| T |
31781943 |
ttttaccgaatggtcgagtcaaaaaccaataatgaagcaactgacggaattcaataagattattgatgatttggcgaacatagatgtaaatatggaagac |
31781844 |
T |
|
| Q |
211 |
gagaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||| |||||| ||||||||| ||| |||||||||| |
|
|
| T |
31781843 |
gaggataaagccttacacctgttgtatgctttacct |
31781808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 92 - 246
Target Start/End: Original strand, 28788401 - 28788555
Alignment:
| Q |
92 |
atctgaaacaacaactctacttttaccaaatggtggaatcaaaacctataatggagcaattgacgaaattcaataagattattgatgatttggcgcacgt |
191 |
Q |
| |
|
||||||||||||||| |||||||| | || |||||| ||||||||||||||||||||| ||||| | || ||||||||| |||||||||||||| || | |
|
|
| T |
28788401 |
atctgaaacaacaaccatacttttatcgaacggtggagtcaaaacctataatggagcaactgacggagtttaataagatttttgatgatttggcgaacat |
28788500 |
T |
|
| Q |
192 |
agatgttaatctgcaagacgagaataaagtcttacacctactgtgtgctttacct |
246 |
Q |
| |
|
||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
28788501 |
agatgttaatctggaagacgaggataaagccttacacctactgtgtgctttacct |
28788555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 28787004 - 28787077
Alignment:
| Q |
18 |
ggagactactgttgtgtctatgtggaataaacttgattcattgtacatgaccaagtccatggcacataaacaat |
91 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||| |
|
|
| T |
28787004 |
ggagactactgctgtgtctatgtggaataaacttgattcattatacatggccaagtctttggcacatagacaat |
28787077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University