View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9955_high_6 (Length: 250)

Name: NF9955_high_6
Description: NF9955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9955_high_6
NF9955_high_6
[»] chr7 (53 HSPs)
chr7 (2-178)||(9946986-9947164)
chr7 (5-178)||(11329893-11330068)
chr7 (1-174)||(44565941-44566116)
chr7 (5-176)||(45045526-45045699)
chr7 (5-175)||(25097969-25098141)
chr7 (1-175)||(27213854-27214030)
chr7 (5-179)||(27248193-27248369)
chr7 (5-176)||(35488187-35488360)
chr7 (5-175)||(27419223-27419395)
chr7 (5-175)||(39554083-39554255)
chr7 (12-161)||(45448849-45448998)
chr7 (5-174)||(40212789-40212960)
chr7 (5-178)||(48314022-48314197)
chr7 (5-173)||(43949145-43949315)
chr7 (1-173)||(45265049-45265223)
chr7 (5-177)||(9814215-9814385)
chr7 (5-175)||(8419588-8419760)
chr7 (13-161)||(38396381-38396529)
chr7 (5-177)||(16825351-16825525)
chr7 (5-177)||(33378734-33378916)
chr7 (1-175)||(25924636-25924812)
chr7 (5-171)||(48341263-48341430)
chr7 (5-178)||(28904182-28904357)
chr7 (1-174)||(38544090-38544265)
chr7 (5-178)||(34930461-34930638)
chr7 (1-173)||(41632365-41632539)
chr7 (5-177)||(25045615-25045788)
chr7 (1-179)||(11000598-11000779)
chr7 (5-172)||(44820154-44820323)
chr7 (75-176)||(48160589-48160692)
chr7 (4-176)||(41684020-41684194)
chr7 (5-111)||(37534168-37534274)
chr7 (9-126)||(45723053-45723170)
chr7 (15-175)||(18824055-18824218)
chr7 (1-119)||(38528764-38528880)
chr7 (15-111)||(30686057-30686153)
chr7 (47-137)||(10902689-10902779)
chr7 (5-133)||(6656515-6656642)
chr7 (1-137)||(43445922-43446058)
chr7 (5-111)||(45440807-45440913)
chr7 (5-137)||(5543170-5543303)
chr7 (1-107)||(22156248-22156355)
chr7 (1-107)||(22212163-22212270)
chr7 (1-92)||(31921811-31921902)
chr7 (5-111)||(40385692-40385799)
chr7 (5-172)||(6656226-6656394)
chr7 (1-128)||(47246114-47246240)
chr7 (47-137)||(30871130-30871220)
chr7 (5-54)||(48160696-48160744)
chr7 (50-137)||(31598623-31598709)
chr7 (5-88)||(43569773-43569856)
chr7 (114-173)||(45723216-45723277)
chr7 (81-137)||(20601297-20601353)
[»] chr4 (63 HSPs)
chr4 (5-177)||(39730290-39730464)
chr4 (5-174)||(48518891-48519062)
chr4 (1-176)||(45747794-45747971)
chr4 (5-175)||(6279920-6280092)
chr4 (5-174)||(13229989-13230160)
chr4 (5-174)||(34049597-34049768)
chr4 (5-175)||(25916034-25916204)
chr4 (5-175)||(48879229-48879401)
chr4 (5-174)||(27762899-27763070)
chr4 (1-177)||(43723164-43723342)
chr4 (12-175)||(40435811-40435976)
chr4 (5-176)||(55967998-55968171)
chr4 (5-175)||(35999590-35999762)
chr4 (1-175)||(39835306-39835482)
chr4 (5-177)||(25932345-25932519)
chr4 (5-155)||(50672927-50673076)
chr4 (5-178)||(42773852-42774027)
chr4 (1-173)||(47670262-47670436)
chr4 (5-175)||(23686691-23686863)
chr4 (1-161)||(41744235-41744396)
chr4 (11-177)||(45596178-45596346)
chr4 (1-178)||(18405230-18405408)
chr4 (16-179)||(39498740-39498905)
chr4 (16-179)||(39502079-39502244)
chr4 (1-178)||(936026-936205)
chr4 (1-161)||(8322145-8322305)
chr4 (12-161)||(27942648-27942803)
chr4 (5-161)||(32953427-32953583)
chr4 (5-177)||(41859044-41859217)
chr4 (5-177)||(18931657-18931831)
chr4 (1-123)||(34238007-34238129)
chr4 (4-175)||(30415805-30415978)
chr4 (20-137)||(10400844-10400961)
chr4 (5-177)||(27555330-27555488)
chr4 (9-137)||(7258871-7258998)
chr4 (5-111)||(51968680-51968787)
chr4 (1-180)||(36858372-36858552)
chr4 (5-111)||(18405657-18405763)
chr4 (1-134)||(12275953-12276086)
chr4 (5-161)||(38414111-38414264)
chr4 (1-177)||(26165265-26165442)
chr4 (4-137)||(47426279-47426414)
chr4 (16-119)||(48059970-48060073)
chr4 (4-137)||(44309663-44309796)
chr4 (1-111)||(31937934-31938045)
chr4 (5-137)||(52469602-52469734)
chr4 (16-137)||(38394821-38394942)
chr4 (1-137)||(22654516-22654654)
chr4 (1-116)||(37014445-37014560)
chr4 (1-137)||(18094148-18094285)
chr4 (5-58)||(48873925-48873978)
chr4 (9-116)||(24805145-24805252)
chr4 (5-79)||(30790446-30790520)
chr4 (89-137)||(36860106-36860154)
chr4 (51-111)||(54478495-54478555)
chr4 (110-161)||(34237435-34237486)
chr4 (6-107)||(46382226-46382328)
chr4 (6-78)||(32384491-32384564)
chr4 (79-179)||(9327240-9327343)
chr4 (79-179)||(9373999-9374102)
chr4 (85-147)||(37296662-37296724)
chr4 (80-137)||(33900981-33901038)
chr4 (82-110)||(9297144-9297172)
[»] chr3 (48 HSPs)
chr3 (5-177)||(40908165-40908339)
chr3 (11-175)||(26848928-26849094)
chr3 (5-174)||(9320448-9320619)
chr3 (5-177)||(11239117-11239291)
chr3 (1-176)||(44952204-44952381)
chr3 (5-175)||(8476307-8476479)
chr3 (5-174)||(28124436-28124607)
chr3 (5-163)||(1099098-1099256)
chr3 (5-174)||(6231501-6231672)
chr3 (5-178)||(20297693-20297868)
chr3 (5-157)||(31611004-31611156)
chr3 (5-177)||(48339754-48339928)
chr3 (12-161)||(33217928-33218077)
chr3 (5-174)||(47114857-47115028)
chr3 (1-175)||(24574463-24574647)
chr3 (1-178)||(31435919-31436098)
chr3 (5-175)||(20414464-20414636)
chr3 (5-137)||(46359852-46359984)
chr3 (1-161)||(53165740-53165900)
chr3 (17-161)||(10822733-10822877)
chr3 (1-137)||(12228295-12228430)
chr3 (22-149)||(1246929-1247056)
chr3 (16-119)||(18460850-18460953)
chr3 (2-178)||(43132153-43132331)
chr3 (5-120)||(43718986-43719101)
chr3 (5-147)||(28770239-28770381)
chr3 (1-137)||(27823170-27823306)
chr3 (1-111)||(33647768-33647878)
chr3 (12-137)||(12930980-12931104)
chr3 (17-137)||(32071357-32071472)
chr3 (2-163)||(2565473-2565633)
chr3 (17-91)||(19533056-19533130)
chr3 (17-137)||(33497768-33497889)
chr3 (44-108)||(29512631-29512695)
chr3 (47-134)||(27093957-27094044)
chr3 (52-116)||(6832016-6832079)
chr3 (80-137)||(39932562-39932621)
chr3 (112-177)||(43715305-43715372)
chr3 (50-137)||(28139759-28139846)
chr3 (91-150)||(26849181-26849240)
chr3 (1-117)||(28693485-28693608)
chr3 (15-175)||(45826687-45826848)
chr3 (1-118)||(13642966-13643083)
chr3 (1-119)||(38140425-38140544)
chr3 (67-103)||(26085678-26085714)
chr3 (12-52)||(29512506-29512546)
chr3 (80-108)||(24784182-24784210)
chr3 (67-163)||(40584562-40584658)
[»] chr1 (64 HSPs)
chr1 (5-178)||(2430397-2430572)
chr1 (1-177)||(52630670-52630848)
chr1 (5-174)||(14788624-14788795)
chr1 (5-175)||(3572564-3572736)
chr1 (5-175)||(46666609-46666781)
chr1 (5-178)||(39329509-39329684)
chr1 (5-176)||(9115738-9115911)
chr1 (5-174)||(20260086-20260257)
chr1 (5-173)||(25789664-25789834)
chr1 (5-175)||(12190176-12190348)
chr1 (1-175)||(35187353-35187529)
chr1 (5-175)||(47037358-47037530)
chr1 (5-177)||(1597339-1597513)
chr1 (2-171)||(36361681-36361851)
chr1 (1-174)||(39930354-39930529)
chr1 (5-172)||(9831872-9832041)
chr1 (5-175)||(2632754-2632925)
chr1 (1-175)||(5518503-5518679)
chr1 (1-171)||(51445083-51445254)
chr1 (1-178)||(6978667-6978846)
chr1 (1-178)||(8331911-8332090)
chr1 (6-175)||(38964678-38964849)
chr1 (5-172)||(32824822-32824992)
chr1 (5-172)||(50190767-50190936)
chr1 (12-175)||(6911393-6911566)
chr1 (5-175)||(48916021-48916193)
chr1 (1-137)||(13653748-13653884)
chr1 (5-180)||(4683368-4683544)
chr1 (11-175)||(29091573-29091739)
chr1 (4-111)||(46960527-46960634)
chr1 (1-159)||(37436638-37436795)
chr1 (20-174)||(1007663-1007819)
chr1 (15-137)||(17475360-17475482)
chr1 (5-177)||(52699463-52699637)
chr1 (35-175)||(5806290-5806428)
chr1 (1-147)||(11014470-11014616)
chr1 (1-132)||(13521218-13521349)
chr1 (1-171)||(31806759-31806929)
chr1 (17-137)||(19083144-19083264)
chr1 (17-137)||(19131032-19131152)
chr1 (1-119)||(24116392-24116510)
chr1 (9-173)||(13931885-13932050)
chr1 (4-118)||(29769411-29769526)
chr1 (1-137)||(30240907-30241042)
chr1 (1-111)||(1227943-1228053)
chr1 (4-175)||(49822916-49823068)
chr1 (5-94)||(32202395-32202484)
chr1 (1-137)||(13440291-13440428)
chr1 (12-137)||(9011200-9011325)
chr1 (5-118)||(47677544-47677657)
chr1 (54-137)||(20505028-20505111)
chr1 (9-112)||(38519126-38519228)
chr1 (50-137)||(52186085-52186172)
chr1 (1-137)||(33702381-33702518)
chr1 (114-175)||(32202330-32202393)
chr1 (48-112)||(38602234-38602298)
chr1 (4-111)||(19094013-19094120)
chr1 (67-137)||(3939503-3939573)
chr1 (20-137)||(37261764-37261880)
chr1 (50-106)||(37336514-37336570)
chr1 (1-100)||(11077952-11078051)
chr1 (61-107)||(52276877-52276921)
chr1 (68-110)||(16257074-16257116)
chr1 (1-98)||(31043461-31043557)
[»] chr5 (40 HSPs)
chr5 (1-175)||(18412105-18412281)
chr5 (5-176)||(19065503-19065676)
chr5 (5-175)||(4765559-4765731)
chr5 (5-175)||(12970529-12970701)
chr5 (1-155)||(8646412-8646566)
chr5 (1-175)||(29543014-29543190)
chr5 (5-175)||(555705-555877)
chr5 (5-179)||(22935907-22936083)
chr5 (5-163)||(32535837-32535995)
chr5 (5-175)||(14206820-14206992)
chr5 (1-175)||(27481253-27481429)
chr5 (1-174)||(36703770-36703945)
chr5 (5-177)||(28602456-28602629)
chr5 (5-171)||(11855658-11855826)
chr5 (1-161)||(6091611-6091771)
chr5 (1-177)||(42012176-42012354)
chr5 (5-161)||(8406794-8406950)
chr5 (1-137)||(27480906-27481041)
chr5 (4-137)||(17251711-17251844)
chr5 (1-137)||(20962486-20962622)
chr5 (1-137)||(35348566-35348699)
chr5 (1-174)||(43346895-43347070)
chr5 (5-161)||(6930541-6930700)
chr5 (5-116)||(19089777-19089888)
chr5 (13-137)||(31583102-31583225)
chr5 (175-234)||(9101303-9101362)
chr5 (5-118)||(40275813-40275926)
chr5 (20-133)||(30899470-30899583)
chr5 (1-129)||(1664626-1664754)
chr5 (5-111)||(41783685-41783792)
chr5 (45-137)||(15200585-15200676)
chr5 (80-172)||(26637045-26637139)
chr5 (1-116)||(28023728-28023844)
chr5 (80-137)||(28429676-28429733)
chr5 (80-137)||(36978210-36978267)
chr5 (28-108)||(15776182-15776261)
chr5 (67-111)||(16720277-16720321)
chr5 (47-137)||(3913239-3913327)
chr5 (47-88)||(40715187-40715228)
chr5 (81-137)||(830059-830115)
[»] chr8 (39 HSPs)
chr8 (5-178)||(35818420-35818595)
chr8 (1-177)||(12710541-12710719)
chr8 (5-175)||(1554353-1554525)
chr8 (5-178)||(38363981-38364156)
chr8 (5-177)||(37392543-37392717)
chr8 (1-161)||(18298008-18298168)
chr8 (1-177)||(16313504-16313682)
chr8 (1-158)||(26601956-26602112)
chr8 (1-161)||(3049905-3050065)
chr8 (5-175)||(32660932-32661105)
chr8 (5-174)||(18726619-18726791)
chr8 (5-178)||(38132733-38132909)
chr8 (1-177)||(25837807-25837985)
chr8 (5-161)||(7931139-7931295)
chr8 (1-173)||(42755763-42755937)
chr8 (6-176)||(41228712-41228884)
chr8 (5-175)||(26062044-26062216)
chr8 (1-137)||(29421528-29421664)
chr8 (5-174)||(10896217-10896387)
chr8 (20-161)||(40197091-40197232)
chr8 (5-177)||(5020487-5020664)
chr8 (2-173)||(33444627-33444798)
chr8 (1-118)||(15226861-15226977)
chr8 (15-178)||(35394300-35394465)
chr8 (5-175)||(7317275-7317445)
chr8 (6-147)||(41432642-41432782)
chr8 (1-172)||(21137134-21137307)
chr8 (4-137)||(14763970-14764102)
chr8 (20-137)||(38437369-38437486)
chr8 (1-101)||(6805698-6805798)
chr8 (1-110)||(19160807-19160916)
chr8 (54-111)||(43872031-43872088)
chr8 (5-137)||(16218982-16219113)
chr8 (11-111)||(31117595-31117695)
chr8 (1-108)||(37981857-37981961)
chr8 (60-175)||(34672289-34672406)
chr8 (20-173)||(25899548-25899702)
chr8 (4-107)||(12650035-12650137)
chr8 (42-112)||(32901786-32901855)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-177)||(201821-201999)
scaffold0006 (1-137)||(143509-143645)
scaffold0006 (17-137)||(119232-119352)
[»] chr6 (16 HSPs)
chr6 (5-177)||(14170914-14171087)
chr6 (5-175)||(2657600-2657772)
chr6 (1-161)||(16968821-16968981)
chr6 (5-174)||(1316919-1317089)
chr6 (5-175)||(7053569-7053749)
chr6 (5-171)||(18897821-18897989)
chr6 (5-137)||(7344122-7344254)
chr6 (1-177)||(6705762-6705940)
chr6 (1-137)||(345870-346006)
chr6 (5-99)||(8029203-8029297)
chr6 (88-175)||(8029316-8029405)
chr6 (5-104)||(10849855-10849955)
chr6 (27-111)||(14781685-14781769)
chr6 (47-161)||(21008039-21008153)
chr6 (80-111)||(8314888-8314919)
chr6 (49-107)||(9760439-9760497)
[»] chr2 (55 HSPs)
chr2 (5-184)||(6171691-6171872)
chr2 (5-175)||(346344-346516)
chr2 (5-175)||(11071505-11071677)
chr2 (5-175)||(37533852-37534024)
chr2 (5-172)||(2050766-2050935)
chr2 (5-175)||(2521575-2521747)
chr2 (5-175)||(5770109-5770281)
chr2 (11-177)||(42674658-42674826)
chr2 (5-174)||(9733846-9734017)
chr2 (5-178)||(21737396-21737579)
chr2 (13-177)||(34356697-34356863)
chr2 (1-176)||(41729128-41729305)
chr2 (6-172)||(37192423-37192591)
chr2 (5-177)||(4559459-4559633)
chr2 (1-177)||(40950856-40951034)
chr2 (5-173)||(41750429-41750599)
chr2 (5-175)||(14777497-14777669)
chr2 (12-177)||(17965890-17966057)
chr2 (1-175)||(39995130-39995314)
chr2 (1-161)||(638490-638649)
chr2 (5-161)||(28311712-28311868)
chr2 (5-161)||(37233329-37233485)
chr2 (5-161)||(26310167-26310325)
chr2 (1-176)||(20426481-20426658)
chr2 (1-180)||(27357957-27358138)
chr2 (5-180)||(45409150-45409327)
chr2 (20-175)||(6571602-6571759)
chr2 (5-171)||(18713660-18713828)
chr2 (4-137)||(45694087-45694220)
chr2 (1-133)||(11763414-11763546)
chr2 (1-161)||(14253418-14253578)
chr2 (1-107)||(23944059-23944165)
chr2 (1-174)||(1988207-1988382)
chr2 (1-161)||(14832706-14832866)
chr2 (1-137)||(3902352-3902488)
chr2 (1-111)||(25724921-25725032)
chr2 (19-175)||(40569934-40570092)
chr2 (1-175)||(25454918-25455096)
chr2 (1-137)||(4875672-4875807)
chr2 (5-76)||(13760867-13760938)
chr2 (2-111)||(39819590-39819702)
chr2 (5-137)||(8868702-8868832)
chr2 (1-113)||(41297981-41298093)
chr2 (1-97)||(3254142-3254239)
chr2 (1-137)||(37851753-37851890)
chr2 (6-137)||(5002876-5003006)
chr2 (9-116)||(13539572-13539679)
chr2 (5-137)||(4685077-4685211)
chr2 (47-137)||(25625328-25625418)
chr2 (1-105)||(516463-516566)
chr2 (60-175)||(14403232-14403349)
chr2 (63-172)||(24499400-24499509)
chr2 (68-110)||(1723294-1723336)
chr2 (1-135)||(1623279-1623412)
chr2 (83-180)||(7007551-7007650)
[»] scaffold0189 (1 HSPs)
scaffold0189 (1-161)||(28967-29127)
[»] scaffold0702 (1 HSPs)
scaffold0702 (4-177)||(3562-3737)
[»] scaffold0662 (1 HSPs)
scaffold0662 (4-177)||(4367-4542)
[»] scaffold0238 (1 HSPs)
scaffold0238 (4-137)||(23335-23468)
[»] scaffold1480 (1 HSPs)
scaffold1480 (4-111)||(450-557)
[»] scaffold0069 (1 HSPs)
scaffold0069 (4-111)||(21855-21962)
[»] scaffold0003 (1 HSPs)
scaffold0003 (67-116)||(305825-305874)


Alignment Details
Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 9947164 - 9946986
Alignment:
Q  2 tctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgt 101  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  9947164 tctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgt 9947065  T
Q  102 aacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  9947064 aacaaacataggcatatacattcctatcattttattcccgggaatcaaaaattataactttaaacaaacacaccctaaa 9946986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 11329893 - 11330068
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  11329893 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 11329992  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  11329993 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 11330068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 44565941 - 44566116
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  44565941 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgggaataaaatttaataaacttg 44566040  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||  |||||||||||||    
T  44566041 taacaaacatagacatatacattcctatcattttatttccggaaatcaacaattataacttgaaacaaacacaccc 44566116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 45045526 - 45045699
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||    
T  45045526 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccggaaataaaatttaataaacttgtaac 45045625  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  45045626 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttaaaacaaacacacccta 45045699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 25097969 - 25098141
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  25097969 catctccatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccggaaataaaatttagtaaacttgtaac 25098068  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||   |||||||||||||||||||||||| |||  ||||||||||||||||||  ||||||||||||||    
T  25098069 aaacatgggcatatacattcctatcattttattcccgaaaatcaaaaattataacttgaaacaaacacaccct 25098141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 27214030 - 27213854
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  27214030 ttctcatctccataggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttg 27213931  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  27213930 taacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 27213854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 179
Target Start/End: Original strand, 27248193 - 27248369
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||    
T  27248193 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccagtaacattttatacctgggaataaaatttagtaaacttgtaac 27248292  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaat 179  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  27248293 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaat 27248369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 35488360 - 35488187
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  35488360 catctccataggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 35488261  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||  |||||||||||| ||||||||||| |||| |||||| |||||||||||  |||||||||||||||    
T  35488260 aaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaacacacccta 35488187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 27419395 - 27419223
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  27419395 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 27419296  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||  |||||||||||  ||||||||||||||    
T  27419295 aaacataggcatatacatttctatcattttattcccgggaatcagcaattataacttgaaacaaacacaccct 27419223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 39554083 - 39554255
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| |||||||||||||||||    
T  39554083 catctccatgggaactttattcccacccttttccttgggaaattttttctattctcaggaacattttataccaaggaataaattttagtaaacttgtaac 39554182  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  39554183 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 39554255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 45448849 - 45448998
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  45448849 atgggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacata 45448948  T
Q  112 aacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
     |||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  45448949 gacatctacattcctatcattttattcccgagaatcaaaaattataactt 45448998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 40212789 - 40212960
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40212789 catctccatgagaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttataccccggaataaaatttagtaaacttgtaac 40212888  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||||||||||||||||| ||| ||||||| |||||||||||  |||||||||||||    
T  40212889 aaacataggcatatacattcctatcattttattcccgcgaatcaacaattataacttgaaacaaacacaccc 40212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 48314022 - 48314197
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||| ||||    
T  48314022 catctccatgggaactttattcccaccattttccttgggaaattttttctattcccagaaacattttatatccgggaataaaatttagtaaacttctaac 48314121  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  48314122 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 48314197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 43949145 - 43949315
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  | ||||||| |||||||||||||||||    
T  43949145 catcttcatgggaactttattcccacccttttccttgggaaattttttctatttccaggaacattttatactaaggaataaattttagtaaacttgtaac 43949244  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||    
T  43949245 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacc 43949315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 45265223 - 45265049
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||     
T  45265223 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccggaaataaaatttagtaaactta 45265124  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||||||||||  |||||||||||| ||||||||||| ||| ||||||| |||||||||||  ||||||||||||    
T  45265123 taacaaacataggcatatacattccaatcattttattcccgagaatcaacaattataacttgaaacaaacacacc 45265049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 9814385 - 9814215
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  9814385 catctccatgagaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 9814286  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||    ||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  9814285 aaac----acatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 9814215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 8419760 - 8419588
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||  ||||||||||||||    
T  8419760 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaac 8419661  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  8419660 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 8419588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 161
Target Start/End: Complemental strand, 38396529 - 38396381
Alignment:
Q  13 tgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataa 112  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||     
T  38396529 tgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttataccaaacatag 38396430  T
Q  113 acatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  38396429 acatatacattcctatcattttattcccgggaatcaacaattataactt 38396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 16825525 - 16825351
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  16825525 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 16825426  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||| ||||||||||||| |  ||||| || |||||||||||  ||||||||||||||||    
T  16825425 aaacataggcatatacatttctatcattttattcctaggaattaacaattataacttgaaacaaacacaccctaa 16825351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 33378734 - 33378916
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacatt--------ttatacccaagaataaaatttagtaaa 96  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||        ||||||||| |||||||||||||||||    
T  33378734 catctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaaatttagtaaa 33378833  T
Q  97 cttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  33378834 cttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 33378916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 25924812 - 25924636
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||    
T  25924812 ttctcatctctatgggaactttattcccacccttttcctggggaaattttttctattcccaggaacattttatacaaaggaataaattttagtaaacttg 25924713  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||| |||||    
T  25924712 taacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacataccct 25924636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 48341263 - 48341430
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||||    
T  48341263 catctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttataccgg-gaataaaatttaataaacttgtaac 48341361  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacaca 171  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  48341362 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacaca 48341430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 28904357 - 28904182
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||| ||||  || |||||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||    
T  28904357 catctccatgggaactttattcccaccctttttcttataaatttttttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaac 28904258  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    ||||||| ||||||||||| |||||||||||||  |||||||||| |||||||||||  |||||||||||||||||    
T  28904257 aaacatagacatatacatttctatcattttattctcgggaatcaacaattataacttaaaacaaacacaccctaaa 28904182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 38544090 - 38544265
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||| |||| |||  |||||||||||||||||||| ||||||||||||||  |||||||||||||||||| ||    
T  38544090 ttctcatctccatgggaactttattcccaccatttttcttgagaaattttttctattcccagaaacattttatacccgggaataaaatttagtaaacctg 38544189  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||| |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  38544190 taataaacataggcatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccc 38544265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 34930638 - 34930461
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  34930638 catctccatgggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 34930539  T
Q  105 -aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt---aacaaacacaccctaaa 178  Q
     |||||||  |||||||||| ||||||||||||| || |||||||| |||||||||||   |||||||||||| ||||    
T  34930538 aaaacataggcatatacatttctatcattttattcccaggaatcaacaattataactttgaaacaaacacaccttaaa 34930461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 41632539 - 41632365
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| | |||||||||||||| | ||||||| |||||||||||||    
T  41632539 ttctcatctccatgggaactttattcccaccctttttcttgggaaattttttctattcctaagaacattttataccaaggaataaattttagtaaacttg 41632440  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    ||| |||||||  |||||||||| |||||||||||||  | |||||||| |||||||||||  ||||||||||||    
T  41632439 taataaacataggcatatacatttctatcattttattctcaggaatcaacaattataacttgaaacaaacacacc 41632365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 25045788 - 25045615
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  25045788 catctccatgggaactttattcccacccttttccttacgaaaatttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaac 25045689  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||| ||||||||| ||||| | ||  ||||||| || ||||||||  ||||||||||||||||    
T  25045688 aaacatatgcatatatattcctatcttttta-tccccagaatcaacaaatataacttgaaacaaacacaccctaa 25045615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 11000598 - 11000779
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| | ||||||||||||||||||||||||||| || ||||| |||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  11000598 ttctcatatgcatgggaactttattcccacccttttctttgggaaaatttttctattcccaagaatattttatacccgggaataaaatttagtaaacttg 11000697  T
Q  101 taacaaacataaac-atatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaat 179  Q
    |||||||||||  | ||||| |||  |||||||||||| || |||||||| |  ||||||||  ||||||||||||||||||    
T  11000698 taacaaacataggctatatatatttatatcattttatttccaggaatcaacatatataacttgaaacaaacacaccctaaat 11000779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 44820154 - 44820323
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||| | ||||||| |||| ||||| ||||||    
T  44820154 catctccatgggaactttattcccacccttttccttgggaaattttttctgttccgaggaacattttataccaaggaataaattttaataaacatgtaac 44820253  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    ||||| | ||| ||||||| ||||||||||||| | |  |||||| |||||||||||  |||||||||||    
T  44820254 aaacacatacaaatacatttctatcattttattcctgaaaatcaacaattataacttgaaacaaacacac 44820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 48160692 - 48160589
Alignment:
Q  75 cccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||    
T  48160692 cccaggaataaaatttagtaaacttgtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacac 48160593  T
Q  173 ccta 176  Q
    ||||    
T  48160592 ccta 48160589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 41684194 - 41684020
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||| |||| ||||||||||||||| |||||| || || ||  ||||||||||||| |||||| ||||| ||   |||||||||||||||||||||||    
T  41684194 tcatctccatgagaactttattcccactcttttctttgggcaaaattttctattcccaagaacatcttatatccggaaataaaatttagtaaacttgtaa 41684095  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||||||||||| ||| ||||||| |||||  | |||||||| || ||||||||  |||||||||||||||    
T  41684094 caaacataaacatatatatttctatcatattattctcaggaatcaacaaatataacttgaaacaaacacacccta 41684020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 37534274 - 37534168
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||   ||||||| ||||||||||||||||    
T  37534274 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccataaatattttatacccggaaataaaagttagtaaacttgtaac 37534175  T
Q  105 aaacata 111  Q
    |||||||    
T  37534174 aaacata 37534168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 45723053 - 45723170
Alignment:
Q  9 ttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaac 108  Q
    ||||||||||||||||||||||| |||| ||| ||||| |||||||||||||| ||||||||||||| |  |||||||||||||||||||||| ||||||    
T  45723053 ttcatgggaactttattcccaccatttttcttgggaaaatttttctattcccaagaacattttatactcgggaataaaatttagtaaacttgtgacaaac 45723152  T
Q  109 ataaacatatacattcct 126  Q
    |||  |||||| ||||||    
T  45723153 ataggcatatatattcct 45723170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 18824055 - 18824218
Alignment:
Q  15 ggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaac 114  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||  ||||||||||||||  |||||||||||||| |||||||||||||||||  |    
T  18824055 ggaactttattcccacctttttccttgggaaaatttttctattcccaaaaacattttatacccgggaataaaatttagtgaacttgtaacaaacataggc 18824154  T
Q  115 atataca-ttcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||| | || ||||||||||||| ||   |||||| || || |||||  ||||||||||||||    
T  18824155 atatatattttctatcattttattcccaaaaatcaacaaatacaacttgaaacaaacacaccct 18824218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 38528880 - 38528764
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||| ||||||||||| |||| ||||| ||  || |||| |||||||||||  ||||||||||||||||||||||||| |||||||||||    
T  38528880 ttctcatcttcatgagaactttattctcacctttttcttt--gatatttattctattcccaataacattttatacccaagaataaaatctagtaaacttg 38528783  T
Q  101 taacaaacataaacatata 119  Q
    |||||||||||| ||||||    
T  38528782 taacaaacataagcatata 38528764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 30686153 - 30686057
Alignment:
Q  15 ggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||| |||||||| | |  ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  30686153 ggaactttattcccacctttttccttggaattttttttctattcccatgaacattttatacccgggaataaaatttagtaaacttgtaacaaacata 30686057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 10902779 - 10902689
Alignment:
Q  47 ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||    
T  10902779 ttttttctattcccaaaaacattttatatccaaaaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcattttatt 10902689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 6656642 - 6656515
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||   ||||| || |||||  |||||||||||||| |||||||||||| | | ||| ||||||||||||||||||||    
T  6656642 catctccatgggaactttattcccatatttttcattgggaaaacttttctattcccagaaacattttatactcgaaaat-aaatttagtaaacttgtaac 6656544  T
Q  105 aaacataaacatatacattcctatcattt 133  Q
    |||||||  |||||| |||| ||||||||    
T  6656543 aaacataggcatatatattcatatcattt 6656515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 43446058 - 43445922
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||| |||||||||||||||| ||||| || |||||  |||| ||||| || ||||||||||||  | |||||||||||||||||||||     
T  43446058 ttctcatctccatgagaactttattcccaccattttctttgggaaaacttttttattctcatgaacattttatattcgagaataaaatttagtaaactta 43445959  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||| |||  ||||||||||  ||| ||||||||    
T  43445958 taacaaatataggcatatacatttttataattttatt 43445922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 45440807 - 45440913
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||| |||||||||||||||   |||| || ||||| ||||| |||||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  45440807 catctccatgagaactttattcccactactttctttgggaaaatttttatattccgaggaacattttatactcgggaataaaatttagtaaacttgtaac 45440906  T
Q  105 aaacata 111  Q
    |||||||    
T  45440907 aaacata 45440913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 5543303 - 5543170
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttagg-aaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    ||||||||||||||||||||||||||  |||| ||| || |||   |||||||||||| |||  ||||||||   |||||||||||||||||||||||||    
T  5543303 catcttcatgggaactttattcccactatttttctttgggaaaaaatttctattcccaagaaagttttatacgagagaataaaatttagtaaacttgtaa 5543204  T
Q  104 caaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||| || |||  |||| |||||||    
T  5543203 caaacataaacatgtatatttatatcgttttatt 5543170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22156355 - 22156248
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaatttttt-ctattcccaggaacattttatacccaagaataaaatttagtaaactt 99  Q
    |||||||||  ||| |||||||||||| ||||||||| || ||||||||||| |||||||||||||| |||||||| |  || ||||||||| |||||||    
T  22156355 ttctcatctctatgagaactttattcctacccttttctttgggaaatttttttctattcccaggaacgttttatacgcgggattaaaatttattaaactt 22156256  T
Q  100 gtaacaaa 107  Q
    ||||||||    
T  22156255 gtaacaaa 22156248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22212270 - 22212163
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaatttttt-ctattcccaggaacattttatacccaagaataaaatttagtaaactt 99  Q
    |||||||||  ||| |||||||||||| ||||||||| || ||||||||||| |||||||||||||| |||||||| |  || ||||||||| |||||||    
T  22212270 ttctcatctctatgagaactttattcctacccttttctttgggaaatttttttctattcccaggaacgttttatacgcgggattaaaatttattaaactt 22212171  T
Q  100 gtaacaaa 107  Q
    ||||||||    
T  22212170 gtaacaaa 22212163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31921902 - 31921811
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttag 92  Q
    |||||||||  |||||||||||||||||||||||||| || | || |||||||||||||||  |||||||||||| || |||||||||||||    
T  31921902 ttctcatctctatgggaactttattcccacccttttctttggaaatttttttctattcccacaaacattttatactcaggaataaaatttag 31921811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 40385799 - 40385692
Alignment:
Q  5 catcttcatgggaactttattcccacccttt-tccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||| |||||||||||||||||||| ||| |  || ||| ||||||||||||||||| |||||||||||  || |||||||||| ||||||||| |||    
T  40385799 catcttaatgggaactttattcccaccatttctttttgggatattttttctattcccagaaacattttatagacaggaataaaattcagtaaacttctaa 40385700  T
Q  104 caaacata 111  Q
    ||||||||    
T  40385699 caaacata 40385692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 6656394 - 6656226
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||| ||||||||| ||||||||||  || |||||  ||||||||| |||| || ||||||||| | | |||||| |||||||||||| ||||    
T  6656394 catctccatggaaactttatttccaccctttttattgggaaaacttttctatttccagaaatattttatactcgaaaataaa-tttagtaaacttataac 6656296  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||||||   ||||| |||| |||||||||||| ||   |||||| || ||||||||  |||||||||||    
T  6656295 aaacataggtatatatattcatatcattttatttccaaaaatcaacaaatataacttgaaacaaacacac 6656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 47246240 - 47246114
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| |||||||||||||||||| |||||||||| ||   |||   || | ||||| | ||||||||||||||  ||||||||||| ||||||||||    
T  47246240 ttctcatattcatgggaactttattctcacccttttcttttaaaaaaaatt-caattcctaagaacattttatacctgagaataaaattcagtaaacttg 47246142  T
Q  101 taacaaacataaacatatacattcctat 128  Q
    ||||||||||| | ||||| ||| ||||    
T  47246141 taacaaacatagaaatatatatttctat 47246114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 30871130 - 30871220
Alignment:
Q  47 ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||||||  ||||||| ||| || | ||||||| ||| ||||||||||||||||||||| || || ||| |||||||||||||    
T  30871130 ttttttctattcccacaaacatttgatatccgaaaataaaacttaataaacttgtaacaaacataaaaatgtatatttctatcattttatt 30871220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 48160744 - 48160696
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttct 54  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||||    
T  48160744 catctccatgggaactttattcccaccattttcctt-ggaaattttttct 48160696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 31598623 - 31598709
Alignment:
Q  50 tttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||| |||||| |||||||||    ||||||||||||||||||||||||||| |||| ||| |  ||| ||||| |||||||    
T  31598623 tttctattcc-aggaacgttttataccttgtaataaaatttagtaaacttgtaacaaatataagcatttgtatttctatcgttttatt 31598709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 43569856 - 43569773
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaat 88  Q
    |||| ||||| ||| ||||||||||||||||| |||||| || ||||| |||| | | ||| |||||||||||  |||||||||    
T  43569856 catcctcatgtgaattttattcccaccctttttcttaggtaaatttttatatttcgaagaatattttatacccgggaataaaat 43569773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 45723216 - 45723277
Alignment:
Q  114 catatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||||| |||||||||||||||||  |||||||||| || ||||||||  ||||||||||||    
T  45723216 catatatattcctatcattttattctcgggaatcaacaaatataacttgaaacaaacacacc 45723277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 20601297 - 20601353
Alignment:
Q  81 aataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||| |||| || |||||||||| |  || ||||||||||||||||||||    
T  20601297 aataaaatttaataaatttataacaaacattagaatgtacattcctatcattttatt 20601353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 39730464 - 39730290
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  39730464 catctccatgtgaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 39730365  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  39730364 aaacatagacatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccctaa 39730290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 48519062 - 48518891
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  48519062 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaac 48518963  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  48518962 aaacataggcatatacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccc 48518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 45747971 - 45747794
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  45747971 ttctcatctccatgggaactttattcccccccttttccttgggaaattttttctattcctaggaacattttatacccgggaataaaatttagtaaacttg 45747872  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  45747871 taacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccta 45747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 6280092 - 6279920
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6280092 catctccatgagaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 6279993  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  6279992 aaacatagacatatacattcatatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 6279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 13230160 - 13229989
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  13230160 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 13230061  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||| ||||||||||||| |||||||| ||||||||||||||  |||||||||||||    
T  13230060 aaacataggcatatacatttctatcattttattcccgggaataaaaaattataacttgaaacaaacacaccc 13229989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 34049768 - 34049597
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  34049768 catctccatgggaactttattcccaccatttttcttgggaaattttttctattcccaggaacattttataccctggaataaaatttagtaaacttgtaac 34049669  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  34049668 aaacatagacatatacattcctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccc 34049597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 25916204 - 25916034
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  25916204 catcttcatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgggaataaaatttagtaaacttgtaac 25916105  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |  ||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  25916104 aaacataggc--atacattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccct 25916034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 48879229 - 48879401
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  48879229 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 48879328  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  48879329 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 48879401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 27763070 - 27762899
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  27763070 catctccatgggaactttattcccacccttttccttgggaaatattttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 27762971  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  27762970 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 27762899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 43723164 - 43723342
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  43723164 ttctcatctccatgggaactttattctcacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttg 43723263  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||  |||||||||| |||||||||||||  |||||||||| |||||||||||  ||||||||||||||||    
T  43723264 taacaaacataggcatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaacacaccctaa 43723342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 40435811 - 40435976
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  40435811 atgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacata 40435910  T
Q  112 aacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
      |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  40435911 ggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 40435976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 55968171 - 55967998
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  55968171 catctccatgggaactttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 55968072  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    ||||| | ||||||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  55968071 aaacagagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacacccta 55967998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 35999590 - 35999762
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  35999590 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 35999689  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||| ||||||||||||| ||| ||||||| |||||||||||  ||||||||||||||    
T  35999690 aaacataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 35999762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 39835482 - 39835306
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  39835482 ttctaatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttg 39835383  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||  ||||||||||  |||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  39835382 taacaaacatatgcatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 39835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 25932345 - 25932519
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  25932345 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 25932444  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||| ||||||||||||| |  |||||||| |||||||||||  ||||||||||||||||    
T  25932445 aaacataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaacacaccctaa 25932519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 50673076 - 50672927
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  50673076 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgagaataaaatttagtaaacttgtaac 50672977  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaatta 155  Q
    ||||||| ||||||||||||||||||||||||| || |||||||| |||||    
T  50672976 aaacatagacatatacattcctatcattttatt-cccggaatcaacaatta 50672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 42773852 - 42774027
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  42773852 catctccatgggaactttattcccacccttttccttgggaaattttttttatccccaggaacattttatacccgggaataaaatttagtaaacttgtaac 42773951  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||  |||||||||||| ||||||||||| || | |||||| |||||||||||  |||||||||||||||||    
T  42773952 aaacataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaacacaccctaaa 42774027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 47670262 - 47670436
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  47670262 ttctcatcttcatggaaactttatttccaccattttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttg 47670361  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||||||||||  |||||||||| ||||||||||||| || |||||||| |||||||||||  ||||||||||||    
T  47670362 taacaaacataggcatatacatttctatcattttatttccaggaatcaacaattataacttgaaacaaacacacc 47670436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 23686691 - 23686863
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| | ||||||| |||||||||||||||||    
T  23686691 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaatattttataccaaggaataaattttagtaaacttgtaac 23686790  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||| ||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  23686791 aaacataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 23686863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41744396 - 41744235
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaag-aataaaatttagtaaactt 99  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  41744396 ttctcatctccataggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaagaaataaattttagtaaactt 41744297  T
Q  100 gtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||||||||  |||||||||| ||||||||||||| |||| |||||| |||||||||||    
T  41744296 gtaacaaacataggcatatacatttctatcattttattcccggaaatcaacaattataactt 41744235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 45596178 - 45596346
Alignment:
Q  11 catgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  45596178 catgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacat 45596277  T
Q  111 aaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |  |||||||||| ||||||||||||| |||  |||||| |||||||||||  ||||||| ||||||||    
T  45596278 aggcatatacatttctatcattttattcccgaaaatcaacaattataacttgaaacaaacgcaccctaa 45596346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 18405408 - 18405230
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||||    
T  18405408 ttctcatctccatgggaactttattctcacccttttcctt-ggaaattttttttattcccaggaacattttataccaaggaataaattttagtaaacttg 18405310  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||||||  |||||||||| |||| ||||||||  |||||||||| |||||||||||  |||||||||||||||||    
T  18405309 taacaaacataggcatatacatttctataattttattctcgggaatcaacaattataacttgaaacaaacacaccctaaa 18405230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 39498740 - 39498905
Alignment:
Q  16 gaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaaca 115  Q
    |||||||||| |||||||||||||| | |  ||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  39498740 gaactttatttccacccttttccttggaattttttttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaaca 39498839  T
Q  116 tatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaat 179  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  39498840 tatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccctaaat 39498905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 39502079 - 39502244
Alignment:
Q  16 gaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaaca 115  Q
    |||||||||| |||||||||||||| | |  ||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  39502079 gaactttatttccacccttttccttggaattttttttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaaca 39502178  T
Q  116 tatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaat 179  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  39502179 tatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccctaaat 39502244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 936026 - 936205
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| | |||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  936026 ttctcatttccatgggaactttattcccaccctttttcttgtgaaattttttctattcccaggaacattttatgcccgggaataaaatttagtaaacttg 936125  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||||||   ||||| ||||| |||||||||||  |||||||||| |||||||||||  |||||||||||||||||    
T  936126 taacaaacatagggatatatattccaatcattttattctcgggaatcaacaattataacttgaaacaaacacaccctaaa 936205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8322145 - 8322305
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| | || ||||||||||||||| ||| |||||||||| | ||||||| |||||||||||||    
T  8322145 ttctcatctccatgggaactttattcccacccttttccttggaaatttttttctattcccaagaatattttataccaaggaataaattttagtaaacttg 8322244  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||||||| ||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  8322245 taacaaacatagacatatacatttctatcattttattcccaggaatcaacaattataactt 8322305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 27942648 - 27942803
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||    
T  27942648 atgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttataataaacata 27942747  T
Q  112 a------acatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |      ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27942748 aacatagacatatacattcctatcattttatttccgggaatcaacaattataactt 27942803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 32953427 - 32953583
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  32953427 catctccatgagaactttattcccaccattttccttgggaaattttttctattcctaggaacattttatacccgagaataaaatttagtaaacttgtaac 32953526  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||| |||  ||||||||||||||||||||| || | ||||||||| |||||||||||    
T  32953527 aaagataggcatatacattcctatcattttgttcctgggaatcaacaattataactt 32953583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 41859217 - 41859044
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||   |||||||||  ||||||||||||||    
T  41859217 catctccatgggaactttattcccacccttttccttgggaaattttt-ctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaac 41859119  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||||| ||||||||||| |||| |||||| |||||||||||  ||||||||||||||||    
T  41859118 aaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaacacaccctaa 41859044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 18931657 - 18931831
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| |||| ||| | || ||||||||||||||||||||||||||||| |  |||||||||||||||||||| || |    
T  18931657 catctccatgggaactttattcccaccatttttcttggaaatttttttctattcccaggaacattttatacacgggaataaaatttagtaaacttatacc 18931756  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||| ||||||||||||||||||||||||| || | |||||| |||||||||||  ||||||||||| ||||    
T  18931757 aaacatagacatatacattcctatcattttattcccagaaatcaacaattataacttgaaacaaacacactctaa 18931831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34238129 - 34238007
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  34238129 ttctcatctccatgggaactttattcccacccttttccttgggaaattgtttctattcccaagaacattttataccaaggaataaattttagtaaacttg 34238030  T
Q  101 taacaaacataaacatatacatt 123  Q
    |||||||||||  ||||||||||    
T  34238029 taacaaacataggcatatacatt 34238007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 30415805 - 30415978
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    ||||||| |||| || |||||||||||| ||||| || |||||||||||||||||| | ||||||||||||     ||||||||||||||||||||||||    
T  30415805 tcatctttatggaaattttattcccaccattttctttgggaaattttttctattccaaagaacattttatatttgggaataaaatttagtaaacttgtaa 30415904  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||| | ||||||| |||||||||||||||||  |||||||||| || ||||||||  ||||||||||||||    
T  30415905 caaacacagacatatatattcctatcattttattatcgggaatcaacaaatataacttgaaacaaacacaccct 30415978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 10400961 - 10400844
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    ||||||||||||  |||| || |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  10400961 tttattcccaccaatttctttgggaaattttttctatttccaggaatattttatacccaagaataaaatttagtaaacttgtaataaacatagacatata 10400862  T
Q  120 cattcctatcattttatt 137  Q
    |||| |||||||||||||    
T  10400861 catttctatcattttatt 10400844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 27555330 - 27555488
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||                |||||||||  |||||||||||||||||||||||||    
T  27555330 catctccatgggaactttattcccacccttttccttgggaaatttttt----------------tttatacccgcgaataaaatttagtaaacttgtaac 27555413  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||  ||||||||||||||||    
T  27555414 aaacatagacatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccctaa 27555488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 7258871 - 7258998
Alignment:
Q  9 ttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaac 108  Q
    |||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||    
T  7258871 ttcatgggaactttattcccactcttttcttttggaaattttttctattcccaggaacattttatacgcggaaataaaatttagtaaacttgtaacaaac 7258970  T
Q  109 ataaacatatacattcctatcattttatt 137  Q
    | | |||| || ||| |||||||||||||    
T  7258971 aaagacatgtatatt-ctatcattttatt 7258998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 51968680 - 51968787
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttagg-aaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||||||||||||||||||||||| ||| || |||  |||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  51968680 catcttcatgggaactttattcccaccctttttctttgggaaacattttctattcccaggaacgttttatactcaagaataaaatttagcaaacttgtaa 51968779  T
Q  104 caaacata 111  Q
    ||||||||    
T  51968780 caaacata 51968787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 36858552 - 36858372
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaatttttt---ctattcccaggaacattttatacccaagaataaaatttagtaaac 97  Q
    ||||||||||||||||||||||||||||||||||||  ||  ||| ||||||   |||||| ||||||||||||||||||  | ||||||||||||||||    
T  36858552 ttctcatcttcatgggaactttattcccacccttttattt--gaattttttttttctattctcaggaacattttatacccgggcataaaatttagtaaac 36858455  T
Q  98 ttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaatt 180  Q
    ||||||||||||||| |  || |||| ||||| |||||||   ||||||| || | ||||||||  |||||||||||||||||||    
T  36858454 ttgtaacaaacataagc--atgcatttctatctttttattcttgggaatctaagaatataacttgaaacaaacacaccctaaatt 36858372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 18405657 - 18405763
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||| ||| |||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||| |  |||||||||| |||||||||||||    
T  18405657 catcttaatgagaactttattcccacccttttctttaggaaaaattttctattcctaggaacattttatacctagaaataaaattttgtaaacttgtaac 18405756  T
Q  105 aaacata 111  Q
    |||||||    
T  18405757 aaacata 18405763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 12276086 - 12275953
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| || ||||||| |||||||||||| |||   || ||||| | ||||| || ||| |||||||||||| ||| |||||||||||||||||||||    
T  12276086 ttctcatttttatgggaattttattcccaccttttcttttgggaaaatatttctttttccaagaacattttatatccaggaataaaatttagtaaacttg 12275987  T
Q  101 taacaaacataaacatatacattcctatcatttt 134  Q
    ||||||||||||||||||| ||| ||||||||||    
T  12275986 taacaaacataaacatatatatttctatcatttt 12275953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 38414111 - 38414264
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||||    |||||||||||||||||||| | ||    
T  38414111 catctccatgagaactttattcccacccttttccttgggaaattttttatattcccggaaacattttatacatg-gaataaaatttagtaaacttattac 38414209  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||| |||| || ||| ||||||||||||| ||  ||||||| || ||||||||    
T  38414210 aaacatagacatgtatatttctatcattttattccc--gaatcaacaaatataactt 38414264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 26165265 - 26165442
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||| ||||||||||||||| |||  ||||| ||| ||||  ||||||||||  || |||||||||||  || |||||||||||||||||||||    
T  26165265 ttctcatcttaatgggaactttattctcactattttctttatgaaaacttttctattctaag-aacattttatattcatgaataaaatttagtaaacttg 26165363  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||||||| | ||||  ||| ||||||||  | |||||| | || |||||| |  ||||||||||||||||    
T  26165364 taacaaacataaacatgtgcatttttatgattttattctcaggaatctacaaatataacatgaaacaaacacaccctaa 26165442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 47426414 - 47426279
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaat-tttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgta 102  Q
    |||||||||||||||||||||| ||||||||||   | |  ||| |||||||||| |||||||||||||||| | |  ||||||||||||||||||||||    
T  47426414 tcatcttcatgggaactttattgccacccttttttcttgataatatttttctatttccaggaacattttatatcaagaaataaaatttagtaaacttgta 47426315  T
Q  103 acaaacataaacatat-acattcctatcattttatt 137  Q
    ||||||||| |||||| | |||| ||||||||||||    
T  47426314 acaaacatagacatataatattcatatcattttatt 47426279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 48059970 - 48060073
Alignment:
Q  16 gaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaaca 115  Q
    |||||||||||||||| ||||  || ||||||||||||||||||||  || |||||||| |||| ||||||||||| |||||| ||||||||||||||||    
T  48059970 gaactttattcccaccattttatttgggaaattttttctattcccataaatattttatatccaaaaataaaatttaataaactcgtaacaaacataaaca 48060069  T
Q  116 tata 119  Q
    ||||    
T  48060070 tata 48060073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 44309663 - 44309796
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaa-ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgta 102  Q
    |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| |  |||| ||||||| | | |||||||||||||||| ||||||    
T  44309663 tcatattcatgggaactttattcccacccttttctttaggaaatttttttctattctctagaacgttttata-ctaggaataaaatttagtaaccttgta 44309761  T
Q  103 acaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||| ||||  | ||| ||||| |||||||    
T  44309762 acaaacatagacatgcatatttctatcgttttatt 44309796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 31938045 - 31937934
Alignment:
Q  1 ttctcatcttcatgggaactttattcccaccc-ttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaactt 99  Q
    ||||||||| |||||||||||||||||||||| |||||||| | ||||||||| |||||||| ||||||||||||     |||||||||||| |||||||    
T  31938045 ttctcatctccatgggaactttattcccaccctttttccttggaaaattttttttattcccaagaacattttatatttgggaataaaatttaataaactt 31937946  T
Q  100 gtaacaaacata 111  Q
     |||||||||||    
T  31937945 ctaacaaacata 31937934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 52469602 - 52469734
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||  ||||||| | |||   |||||||||| || ||||||||||  ||   ||||||||||| ||||||||||||    
T  52469602 catctccatgggaactttattcccaccaatttccttggaaaaaaatttctattcctagaaacattttattgccggaaataaaatttaataaacttgtaac 52469701  T
Q  105 aaacataaacatatacattcctatcattttatt 137  Q
    ||||||| |||||| || | |||||||||||||    
T  52469702 aaacatagacatatgcaattctatcattttatt 52469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 38394821 - 38394942
Alignment:
Q  16 gaactttattcccaccc-ttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaac 114  Q
    ||||||||||||||||| ||||| || |||| |||||| |||| |||| || |||||||||  | ||||||||||||||||||||||||||||||||| |    
T  38394821 gaactttattcccaccccttttctttgggaatttttttatatttccagaaatattttatact-aggaataaaatttagtaaacttgtaacaaacataagc 38394919  T
Q  115 atatacattcctatcattttatt 137  Q
    || || ||||| ||| |||||||    
T  38394920 atgtatattcccatcgttttatt 38394942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22654654 - 22654516
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttagga--aattttttctattcccaggaacattttatacccaagaataaaatttagtaaact 98  Q
    ||||||| ||||||  ||||||||||||||||||||  || |||  || ||||||||||| ||  |||||||| ||||| ||||||||| ||||| ||||    
T  22654654 ttctcattttcatgaaaactttattcccaccctttttttttggagaaagtttttctattcgcaataacattttttacccgagaataaaaattagttaact 22654555  T
Q  99 tgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||| |||||||  ||| || ||| |||||||||||||    
T  22654554 tgtaataaacataggcatgtatatttctatcattttatt 22654516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37014560 - 37014445
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||| |||||||||| |||| |||||| || |||||||||||||||||| | |||||| |||||||     |||||||||| ||||||      
T  37014560 ttctcatcttcatgagaactttatttccactcttttctttgggaaattttttctattcctatgaacatgttatacctggatataaaatttaataaactca 37014461  T
Q  101 taacaaacataaacat 116  Q
    |||||||||| |||||    
T  37014460 taacaaacatcaacat 37014445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18094148 - 18094285
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaa---attttttctattcccaggaacattttatacccaagaataaaatttagtaaac 97  Q
    |||||||||||||||||||||||||| |||| |||| ||| ||||    ||||||||||||| || |||||||||||||| | ||||||| |||||||||    
T  18094148 ttctcatcttcatgggaactttattctcaccatttt-ctttggaattttttttttctattcctagaaacattttatacccgaaaataaaa-ttagtaaac 18094245  T
Q  98 ttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    || || |||||||||  |  || ||| |||||||||||||    
T  18094246 ttctagcaaacataagaaggtatatttctatcattttatt 18094285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 48873925 - 48873978
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattc 58  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  48873925 catctccatgggaactttattcccacccttttccttgggaaattttttctattc 48873978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 24805252 - 24805145
Alignment:
Q  9 ttcatgggaactttattc-ccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaa 107  Q
    |||||||||||||||||  ||||| ||||| ||  |||||||||||||||||||  ||  |||||| ||| | |||||||||||||||| ||||||||||    
T  24805252 ttcatgggaactttattttccaccattttctttgtgaaattttttctattcccaa-aatgttttattcccgaaaataaaatttagtaaatttgtaacaaa 24805154  T
Q  108 cataaacat 116  Q
    |||||||||    
T  24805153 cataaacat 24805145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 30790446 - 30790520
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaa 79  Q
    ||||||||||| ||||||||||||| ||||||| || | |||  |||||||||| ||| ||||||||||||||||    
T  30790446 catcttcatggaaactttattcccatccttttcattggaaaaacttttctattctcagaaacattttatacccaa 30790520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 36860106 - 36860154
Alignment:
Q  89 ttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  36860106 ttagtaaacttgtaacaaacataaacatatatatttatatcattttatt 36860154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 54478495 - 54478555
Alignment:
Q  51 ttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||| |||  ||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  54478495 ttctatttccaataacattttatacccatgaatgaaatttagtaaacttataacaaacata 54478555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 34237486 - 34237435
Alignment:
Q  110 taaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||| |||||||| ||||||||||||| ||||||||||| |||||||||||    
T  34237486 taaacctatacatttctatcattttattcccgggaatcaacaattataactt 34237435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 46382328 - 46382226
Alignment:
Q  6 atcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaaca-ttttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||| |||||||||| || || ||||  ||| |||||||||||||||| |  ||| | ||||||||  || ||||||||||| ||||||||||||    
T  46382328 atcttcatgagaactttatttcctccattttttttaagaaattttttctattctctagaatatttttatacttaaaaataaaatttattaaacttgtaac 46382229  T
Q  105 aaa 107  Q
    |||    
T  46382228 aaa 46382226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 32384564 - 32384491
Alignment:
Q  6 atcttcatgggaactttattcccacccttttccttaggaaatt-ttttctattcccaggaacattttataccca 78  Q
    ||||| ||||||| |||||||||||||||||| || ||||||| |||||| || ||| |||| |||||||||||    
T  32384564 atctttatgggaattttattcccacccttttctttgggaaatttttttctgtttccatgaacgttttataccca 32384491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 9327343 - 9327240
Alignment:
Q  79 agaataaaatttagtaaacttgt-aacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||| ||| |||||||||    |||||||| || ||||||||  || ||| |||||||    
T  9327343 agaataaaatttagtaaacttataaacaaacatagacatatatatttctaacattttatttttaggaatcaacaaatataacttgaaataaaaacaccct 9327244  T
Q  176 aaat 179  Q
    ||||    
T  9327243 aaat 9327240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 9374102 - 9373999
Alignment:
Q  79 agaataaaatttagtaaacttgt-aacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||| ||| |||||||||    |||||||| || ||||||||  || ||| |||||||    
T  9374102 agaataaaatttagtaaacttataaacaaacatagacatatatatttctaacattttatttttaggaatcaacaaatataacttgaaataaaaacaccct 9374003  T
Q  176 aaat 179  Q
    ||||    
T  9374002 aaat 9373999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 37296662 - 37296724
Alignment:
Q  85 aaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatc 147  Q
    |||||||| ||||| ||||||||||||| ||| || ||| ||||||||||||| || ||||||    
T  37296662 aaatttagcaaactagtaacaaacataagcatgtatatttctatcattttatttccaggaatc 37296724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 33900981 - 33901038
Alignment:
Q  80 gaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||| |||| || ||||||||||||  ||| ||||| |||||||||||||    
T  33900981 gaataaaatttaataaatttataacaaacataataatacacatttctatcattttatt 33901038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 9297172 - 9297144
Alignment:
Q  82 ataaaatttagtaaacttgtaacaaacat 110  Q
    |||||||||||||||||||||||||||||    
T  9297172 ataaaatttagtaaacttgtaacaaacat 9297144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 5e-71; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 40908165 - 40908339
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40908165 catcttcatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 40908264  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  40908265 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 40908339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 26848928 - 26849094
Alignment:
Q  11 catgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  26848928 catgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacat 26849027  T
Q  111 aaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  26849028 aggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 26849094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 9320619 - 9320448
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  9320619 catctccatgggaactttattcccacctttttccttaggaaattttttctattcccaggaatattttatacccgggaataaaatttagtaaacttgtaac 9320520  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  9320519 aaacataagtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 9320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 11239291 - 11239117
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  11239291 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 11239192  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  11239191 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 11239117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 44952204 - 44952381
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||    
T  44952204 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttataccaaggaataaattttagtaaacttg 44952303  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  44952304 taacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccta 44952381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 8476479 - 8476307
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8476479 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 8476380  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||| |  |||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  8476379 aaacacaggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 8476307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 28124607 - 28124436
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||| ||||    
T  28124607 catcttcatgggaactttattcccacccttttccttgggaaattttttatattccgaggaacattttatacccgggaataaaatttagtaaacttataac 28124508  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||||||||||||||||| ||| ||||||| |||||||||||  |||||||||||||    
T  28124507 aaacataggcatatacattcctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccc 28124436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 1099098 - 1099256
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  1099098 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 1099197  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataacttaa 163  Q
    |||||||   ||||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  1099198 aaacatagggatatacatttctatcattttattcccgggaatcaacaattataacttaa 1099256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 6231672 - 6231501
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  6231672 catctccatgggaactttattcccaccattttcattgggaaattttttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaac 6231573  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  ||||||||||||||||||||||||  |||||||||| |||||||||||  |||||||||||||    
T  6231572 aaacataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaacacaccc 6231501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 20297693 - 20297868
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||    
T  20297693 catctccatgggaactttattcccacccttttccttggaaatttttttctattcccaggaacattttataccaaggaataaattttaataaacttgtaac 20297792  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  20297793 aaacataggcatatacatttctatcattttatttccgggaatcaacaattataacttgaaacaaacacaccctaaa 20297868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 31611156 - 31611004
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||| |||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  31611156 catctccataggaactttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 31611057  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattata 157  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||    
T  31611056 aaacatagacatatacattccaatcattttattcccgggaatcaacaattata 31611004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 48339928 - 48339754
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||||    
T  48339928 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaac 48339829  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  ||||||||||  |||||||||||| |||| |||||| |||||||||||  |||||||||| |||||    
T  48339828 aaacataggcatatacatttatatcattttattcccggaaatcaacaattataacttgaaacaaacacatcctaa 48339754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 33218077 - 33217928
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||| |||| ||||||||||||||    
T  33218077 atgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatactcgggaataaaatttaataaatttgtaacaaacata 33217978  T
Q  112 aacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
      |||||||||||||||||||||||| |||| |||||| |||||||||||    
T  33217977 ggcatatacattcctatcattttattcccggaaatcaacaattataactt 33217928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 47115028 - 47114857
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||||||| |  |||||||||||||||||||||||||    
T  47115028 catctccatgggaactttattcccacccttttccttgggaatttttttttatttccaggaacattttatactcgggaataaaatttagtaaacttgtaac 47114929  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||||| ||||||||||| || |||||||| |||||||||||  |||||||||||||    
T  47114928 aaacataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaacacaccc 47114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 24574463 - 24574647
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacatt--------ttatacccaagaataaaatttag 92  Q
    ||||||||| ||||||||||||||||||||| |||| ||| |||||||||||||||| |||| ||||||        ||||||||| |||||||||||||    
T  24574463 ttctcatctccatgggaactttattcccaccatttttcttgggaaattttttctatttccagaaacattttatcattttatacccaggaataaaatttag 24574562  T
Q  93 taaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  24574563 taaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 24574647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 31436098 - 31435919
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||  |||| || ||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  31436098 ttctcatctccatgggaactttattcccaccaatttctttgggaaaatttttctattttcaggaacattttatacccaggaataaaatttagtaaacttg 31435999  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||||||  |||||||||| |||||||||||||  | |||||||| || ||||||||  |||||||||||||||||    
T  31435998 taacaaacataggcatatacatttctatcattttattctcaggaatcaacaaatataacttgaaacaaacacaccctaaa 31435919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 20414636 - 20414464
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| ||| |||||||||||||||  ||||||||||||||||| || ||||    
T  20414636 catctccatgggaactttattcccacccttttccttgggaatttttttttatttccaagaacattttatacccgggaataaaatttagtaaatttataac 20414537  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||| ||||||||||| || | |||||| |||||||||||  ||||||||||||||    
T  20414536 aaacataggcatatacattccaatcattttattcccagaaatcaacaattataacttgaaacaaacacaccct 20414464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 46359852 - 46359984
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||||||||  |||||||||||||||||||||||||    
T  46359852 catctccatgggaactttattcccacccttttccttgggaaatattttctattcacaagaacattttatacccgggaataaaatttagtaaacttgtaac 46359951  T
Q  105 aaacataaacatatacattcctatcattttatt 137  Q
    |||||||   |||||||||||||||||||||||    
T  46359952 aaacataggtatatacattcctatcattttatt 46359984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 53165900 - 53165740
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||| ||| | |||  |||||||||||||| ||||||||||| ||  |||||||||||||||||||||    
T  53165900 ttctcatctccatgggaactttattcccaccctttttcttggaaaaaattttctattcccagaaacattttatatccgggaataaaatttagtaaacttg 53165801  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||||||| |||||| |||||||||||||||||   ||||||||| || ||||||||    
T  53165800 taacaaacataagcatatatattcctatcattttatttatgggaatcaacaaatataactt 53165740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 10822877 - 10822733
Alignment:
Q  17 aactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacat 116  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||  ||||    |||||||||||||||||||||||| ||||    
T  10822877 aactttattcccacccttttcctagggaaattttttctattcccaggaacattttatacccgggaattttttttagtaaacttgtaacaaacatagacat 10822778  T
Q  117 atacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||| | ||||||||||||| |||| |||||| || ||||||||    
T  10822777 atacacttctatcattttattcccggaaatcaacaaatataactt 10822733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 12228430 - 12228295
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||| |||| ||||| || | || |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  12228430 ttctcatctccatgggaactttattctcacc-ttttctttggaaatttttttctattcccagaaacattttgtacccgagaataaaatttagtaaacttg 12228332  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    ||| |||||||  |||||| ||| |||||||||||||    
T  12228331 taataaacataggcatatatatttctatcattttatt 12228295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 1247056 - 1246929
Alignment:
Q  22 tattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatataca 121  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||| |    ||||||||||||||||||||||||||||||||| |||||  |    
T  1247056 tattcccacctttttccttcggaaattttttctattaccaggaacattttattcttgggaataaaatttagtaaacttgtaacaaacataagcatatgta 1246957  T
Q  122 ttcctatcattttattgccgggaatcaa 149  Q
    || ||||||||||||| ||| |||||||    
T  1246956 tttctatcattttattcccgagaatcaa 1246929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 18460850 - 18460953
Alignment:
Q  16 gaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaaca 115  Q
    |||||||||| ||||| ||||| || ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  18460850 gaactttatttccaccattttctttgggaaaatttttctattcccagaaacattttataccaaagaataaaatttagtaaacttgtaacaaacatagaca 18460949  T
Q  116 tata 119  Q
    ||||    
T  18460950 tata 18460953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 43132331 - 43132153
Alignment:
Q  2 tctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgt 101  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||   ||| ||||| |||| |||||||||||   | ||||||||||| |||||||||    
T  43132331 tctcatctccgtgggaactctattcccacccttttccttgggaaaaaatttatattctcaggtacattttatacatgaaaataaaatttaataaacttgt 43132232  T
Q  102 aacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    ||||||||||  |||||| |||||||| ||||||||  || ||||||| || ||||||||  |||||||||||||||||    
T  43132231 aacaaacataggcatatatattcctattattttattctcgagaatcaacaaatataacttgaaacaaacacaccctaaa 43132153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 43719101 - 43718986
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || | ||||||| |||| ||||||||||||    
T  43719101 catctccatgggatctttattcccacccttttccttgggaaattttttctattctcaggaacattttatgccaaggaataaattttaataaacttgtaac 43719002  T
Q  105 aaacataaacatatac 120  Q
    ||||||| | ||||||    
T  43719001 aaacatagatatatac 43718986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 28770381 - 28770239
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||| |||||||||||||||| ||||| || ||||| |||||||||| | |||||| ||||||||||| |||| |||||||||||||||||| |    
T  28770381 catcttcatgagaactttattcccaccattttctttgggaaaatttttctattgctaggaacgttttatacccaggaatcaaatttagtaaacttgtacc 28770282  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatc 147  Q
    ||||||| ||||  | ||| ||||| ||||||| || ||||||    
T  28770281 aaacatagacatgcatatttctatctttttattcccaggaatc 28770239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 27823170 - 27823306
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||| ||| |||||||||||||||||| || ||||| |||| ||||| | | |||| |||||||| |  ||||||||||||||||||||     
T  27823170 ttctcatcttcatgagaattttattcccacccttttctttgggaaaattttcctatttcgatgaacgttttatactcgggaataaaatttagtaaactta 27823269  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    || |||||||| |||| || ||| |||||||||||||    
T  27823270 tagcaaacatagacatttatatttctatcattttatt 27823306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33647878 - 33647768
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||| || ||||||||| |||| |||||| || | || |||||| ||||| ||| ||| ||||||||||| |||||||||||||||||||||    
T  33647878 ttctcatcttcaaggaaactttatttccactcttttctttggaaatttttttatattctcagaaacgttttatacccaggaataaaatttagtaaacttg 33647779  T
Q  101 taacaaacata 111  Q
    |||||||||||    
T  33647778 taacaaacata 33647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 12931104 - 12930980
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    |||||||||||||||||||| ||||| ||  ||||  |||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||||    
T  12931104 atgggaactttattcccaccattttctttgagaaaacttttctattcccataaacattttataccgg-gaataaaatttagtaaacttgtaacaaacata 12931006  T
Q  112 aacatatacattcctatcattttatt 137  Q
      ||||| ||||  ||| ||||||||    
T  12931005 gccatatgcatttttatgattttatt 12930980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 32071357 - 32071472
Alignment:
Q  17 aactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacat 116  Q
    |||||||||| | |||||||| ||| |||| | |||||||| ||| |||||||| |||||||| ||||||||||||||||||||||||||||||    ||    
T  32071357 aactttattctcgcccttttctttaagaaaatctttctatttccatgaacatttcatacccaa-aataaaatttagtaaacttgtaacaaacat----at 32071451  T
Q  117 atacattcctatcattttatt 137  Q
    ||| ||| |||||||||||||    
T  32071452 atatatttctatcattttatt 32071472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 2565633 - 2565473
Alignment:
Q  2 tctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgt 101  Q
    |||||||||||||||||||||||||||||| ||||| || | |||  ||||||||||| || ||||||||||||||  |||  |||||||  ||||||||    
T  2565633 tctcatcttcatgggaactttattcccaccattttctttggaaaaaattttctattccaagaaacattttataccc-ggaaataaatttaacaaacttgt 2565535  T
Q  102 aacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataacttaa 163  Q
    |||||||| |   ||||| ||| |||| |||||||| |   ||||||| || ||||||||||    
T  2565534 aacaaacacaggtatatatatttctattattttattcctaagaatcaacaaatataacttaa 2565473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 19533056 - 19533130
Alignment:
Q  17 aactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaattta 91  Q
    |||||||||||||||||||||||| | |||   ||||||||||||||||||||||||||||  ||||||||||||    
T  19533056 aactttattcccacccttttccttggaaaaaaatttctattcccaggaacattttatacccgggaataaaattta 19533130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 33497768 - 33497889
Alignment:
Q  17 aactttattcccacccttttccttaggaaattttttct-attcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaaca 115  Q
    |||||||||| |||||||||| ||||||  |||||| | |||| || ||||||||| || || ||||||||||||| |||| |||||||||| |||| ||    
T  33497768 aactttattctcacccttttctttaggatttttttttttattctcatgaacattttgtatcctagaataaaatttaataaatttgtaacaaatataagca 33497867  T
Q  116 tatacattcctatcattttatt 137  Q
    | || ||| |||||||||||||    
T  33497868 tgtatatttctatcattttatt 33497889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 29512631 - 29512695
Alignment:
Q  44 aaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaac 108  Q
    |||||||||||||||| | ||||||||||||| || ||||||||||||||||||||| |||||||    
T  29512631 aaattttttctattccgatgaacattttatactcaggaataaaatttagtaaacttgaaacaaac 29512695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 27093957 - 27094044
Alignment:
Q  47 ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcatttt 134  Q
    |||||||||||||||  |||||||||||||| ||||||| || |||||||||| |||||||||||  |||||| ||| | ||||||||    
T  27093957 ttttttctattcccataaacattttatacccgagaataagatatagtaaacttataacaaacataggcatatatatttcaatcatttt 27094044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 6832079 - 6832016
Alignment:
Q  52 tctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacat 116  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||| ||||    
T  6832079 tctattcccaggaatattttatacctg-gaataaaatttagtaaacttgtaacaaacatagacat 6832016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 39932621 - 39932562
Alignment:
Q  80 gaataaaatttagtaaacttgtaacaaacataaaca--tatacattcctatcattttatt 137  Q
    |||||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||    
T  39932621 gaataaaatttagtaaacttataacaaacataaacatatatacatttctatcattttatt 39932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 43715372 - 43715305
Alignment:
Q  112 aacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||| |||||||||||||  |||||||||| |||||||||||  ||||||||||||||||    
T  43715372 aacatatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaacacaccctaa 43715305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 28139846 - 28139759
Alignment:
Q  50 tttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||| |||| ||||||| || | ||||||||||| ||| |||||||||||||||| ||| || ||| ||||| |||||||    
T  28139846 tttctattcccaagaacgttttatatccgaaaataaaatttactaatcttgtaacaaacataagcatgtatatttctatctttttatt 28139759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 26849240 - 26849181
Alignment:
Q  91 agtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaa 150  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||  ||| |||||||    
T  26849240 agtaaacttgtaacaaacatagacatatatatttctatcattttattatcggtaatcaaa 26849181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 28693608 - 28693485
Alignment:
Q  1 ttctcatcttcatgggaactttattccc--acccttttc----cttag-gaaattttttctattcccaggaacattttatacccaagaataaaatttagt 93  Q
    |||||||||||||| |||||||||||||  |||||||||    ||| | |||| ||||||||||| ||||| | |||||||| || |||||||||||| |    
T  28693608 ttctcatcttcatgagaactttattcccccacccttttcttttctttgagaaaatttttctattctcaggatcgttttatactcatgaataaaatttaat 28693509  T
Q  94 aaacttgtaacaaacataaacata 117  Q
      |||| |||||||||||| ||||    
T  28693508 tgacttataacaaacataagcata 28693485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 45826687 - 45826848
Alignment:
Q  15 ggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaac 114  Q
    |||||||| |||||| ||||||| ||  |||  || |||||||||||||||||||||||| |    ||||||||||| ||||||||||| |||||||       
T  45826687 ggaacttttttcccatccttttctttgtgaatgttcttctattcccaggaacattttatatcatgaaataaaatttaataaacttgtaa-aaacatatga 45826785  T
Q  115 atatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||  | ||| ||||||||||||| || |||||| | ||  |||||||  ||||||||||||||    
T  45826786 atgcagatttctatcattttattccctggaatctacaacgataacttgaaacaaacacaccct 45826848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13642966 - 13643083
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaattta-gtaaactt 99  Q
    ||||||| ||||||| ||||||||||| ||| ||||  || | |||  ||||||||||| | ||||||||||||  |||||| |||| ||| || |||||    
T  13642966 ttctcattttcatggaaactttattcc-accattttttttggaaaaacttttctattcctaagaacattttataatcaagaacaaaaattaggttaactt 13643064  T
Q  100 gtaacaaacataaacatat 118  Q
    |||||||||||| ||||||    
T  13643065 gtaacaaacatagacatat 13643083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 38140544 - 38140425
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaac--attttatacccaagaataaaatttagtaaact 98  Q
    ||||||||||||||| |||||||||| |||||||||| || | |||   |||||||||| ||||||  ||||||||| |   |||||| | |||||||||    
T  38140544 ttctcatcttcatgg-aactttattctcacccttttctttggaaaaaaatttctattcctaggaacatattttatactcgtcaataaattatagtaaact 38140446  T
Q  99 tgtaacaaacataaacatata 119  Q
    | ||||||||||  |||||||    
T  38140445 tataacaaacattgacatata 38140425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 26085678 - 26085714
Alignment:
Q  67 attttatacccaagaataaaatttagtaaacttgtaa 103  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26085678 attttatacccaaaaataaaatttagtaaacttgtaa 26085714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 29512506 - 29512546
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaatttttt 52  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  29512506 atgggaactttatttccacccttttccttgggaaatttttt 29512546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 24784182 - 24784210
Alignment:
Q  80 gaataaaatttagtaaacttgtaacaaac 108  Q
    |||||||||||||||||||||||||||||    
T  24784182 gaataaaatttagtaaacttgtaacaaac 24784210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 40584562 - 40584658
Alignment:
Q  67 attttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataacttaa 163  Q
    |||||||| || | ||||||||||| ||||||||||  ||||||| |||||| ||||  ||| ||||||||  | |||||| | || ||||||||||    
T  40584562 attttatatccgaaaataaaatttaataaacttgtagaaaacatagacatatgcatttttatgattttattctcaggaatctacaaatataacttaa 40584658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 2430397 - 2430572
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  2430397 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 2430496  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  2430497 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 2430572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 52630670 - 52630848
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52630670 ttctcatctccatgggaactttattcccacccttttctttgagaaattttttctattcccaggaacattttatacccgagaataaaatttagtaaacttg 52630769  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||  ||||||||||||||||    
T  52630770 taacaaacatagacatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaacacaccctaa 52630848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 14788624 - 14788795
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  14788624 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaatataatttagtaaacttgtaac 14788723  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||    
T  14788724 aaacatagacatatacattcctattattttattcccgggaatcaaaaattataacttgaaacaaacacaccc 14788795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 3572736 - 3572564
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  3572736 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaac 3572637  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  3572636 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 3572564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 46666609 - 46666781
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  46666609 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 46666708  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  46666709 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 46666781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 39329509 - 39329684
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  39329509 catctccatgggaactttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 39329608  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  39329609 aaacatagacatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 39329684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 9115738 - 9115911
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  9115738 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 9115837  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  9115838 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccta 9115911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 20260257 - 20260086
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  20260257 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 20260158  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||||| ||||||||||| || |||||||| |||||||||||  |||||||||||||    
T  20260157 aaacataggcatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaacacaccc 20260086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 25789664 - 25789834
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  25789664 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 25789763  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||    
T  25789764 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacacc 25789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 12190348 - 12190176
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12190348 catcttcatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 12190249  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  ||| |||||||||||||||||||| |||  |||||| |||||||||||  ||||||||||||||    
T  12190248 aaacataggcatgtacattcctatcattttattcccgaaaatcaacaattataacttgaaacaaacacaccct 12190176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 35187353 - 35187529
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  35187353 ttcttatctccatgggaactttattcccacccttctccttgggaaattttttctattcccacgaacattttataccaaggaataaattttagtaaacttg 35187452  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||  || |||||||||||    
T  35187453 taacaaacataaacatatacatttctatcattttattcccgggaatcaacaattataacttgaaaaaaacacaccct 35187529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 47037358 - 47037530
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  47037358 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 47037457  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||| ||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  47037458 aaacataggcatatatatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 47037530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 1597513 - 1597339
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  1597513 catcttcatgggaactttattcccaccctttttcttggaaaaatttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaac 1597414  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||||||||||||||||| |||| |||||| |||||||||||  ||||||||||||||||    
T  1597413 aaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccctaa 1597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 36361681 - 36361851
Alignment:
Q  2 tctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgt 101  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||    
T  36361681 tctcatctccatgggaactttattccc-cccttttccttgggaaattttttctattcctaggaacattttatacctgggaataaaatttagtaaacttgt 36361779  T
Q  102 aacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacaca 171  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  36361780 aacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacaca 36361851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 39930354 - 39930529
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  39930354 ttctcatctccatggaaactttattcccacccttttccttggaaatttttttctattcccaggaacattttataccaaggaataaattttagtaaacttg 39930453  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  39930454 taacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 39930529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 9832041 - 9831872
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  9832041 catctccatgggaactttattcccacccttttccttgggaaaatttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 9831942  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||||||  |||||||||| ||||||||||||| | ||||||||| |||||||||||  |||||||||||    
T  9831941 aaacataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaacacac 9831872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 2632754 - 2632925
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  2632754 catctccatgggaactttattcc-accattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaac 2632852  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  2632853 aaacataggcatatacattcctattattttattcccgggaatcaacaattataacttgaaacaaacacaccct 2632925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 5518679 - 5518503
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5518679 ttctcatctccatgggaactttattcccacctttttccttgggaaaatttttctattcccaggaacattttatacccgggaataaaatttagtaaacttg 5518580  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||  |||||| ||| ||||||||||||| | ||||||||| || ||||||||  ||||||||||||||    
T  5518579 taacaaacataggcatatatatttctatcattttattcctgggaatcaacaaatataacttgaaacaaacacaccct 5518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 51445254 - 51445083
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  51445254 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttata-ctaagaataaattttagtaaacttg 51445156  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacaca 171  Q
    |||||||||||   |||||||||  |||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  51445155 taacaaacataggtatatacatttatatcattttattcccgggaatcaacaattataacttgaaacaaacaca 51445083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 6978667 - 6978846
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||| | ||||||||||||  | ||||||| |||||||||||||    
T  6978667 ttctcatctccatggaaactttattcccacccttttccttgagaaattttttctattccctgaaacattttatacgaaggaataaattttagtaaacttg 6978766  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  6978767 taacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 6978846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 8331911 - 8332090
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||   |  |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8331911 ttctcatctccatgggaactttattcccacccttttccttgaaattttttttctattcccaggaacattttatacccgggaataaaatttagtaaacttg 8332010  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
     ||||||||||  |||||||||||| ||||||||||| |||| |||||| |||||||||||  |||||||||||||||||    
T  8332011 caacaaacataggcatatacattccaatcattttattcccggaaatcaacaattataacttgaaacaaacacaccctaaa 8332090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 38964849 - 38964678
Alignment:
Q  6 atcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaaca 105  Q
    |||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||||||||||    
T  38964849 atctccatgggaactttattcccaccctttctcttgggaaattttttctattcccaggaacattttataccaaggaataaatttttgtaaacttgtaaca 38964750  T
Q  106 aacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||| ||||    
T  38964749 aacataagcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacaccccct 38964678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 32824822 - 32824992
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttagg-aaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||    
T  32824822 catcttcatgggaactttattcccacccttttcctttgggaaattttttctattcccaggaacaatttatacccggaaataaaatttagtaaacttgtaa 32824921  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    ||||||||  ||||||||||||||| |||||||| |||| |||||| |||||||||||  |||||||||||    
T  32824922 caaacataggcatatacattcctattattttatttccggaaatcaacaattataacttgaaacaaacacac 32824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 50190936 - 50190767
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  50190936 catcttcatgggaactttattcccacctttttccttgggaaattttttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaac 50190837  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||| ||  |||||||||||||| ||||||||| |||| ||| || ||||||| |||  |||||||||||    
T  50190836 aaacgtaggcatatacattcctagcattttatttccggaaattaacaattatatcttgaaacaaacacac 50190767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 6911393 - 6911566
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaacatt--------ttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||    
T  6911393 atgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaaatttagtaaacttgtaa 6911492  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||  ||||||||||| |||||||||||| ||| ||||||| |||||||||||  ||||||||||||||    
T  6911493 caaacataggcatatacattcttatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 6911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 48916193 - 48916021
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||| |||| || || |||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  48916193 catctccatgggaactttattcccatccttatctttgggaaattttttctattcccatgaacattttatacccgaaaataaaatttagtaaacttgtaac 48916094  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||| |||||||||||||  | |||||||| || ||||||||  || |||||||||||    
T  48916093 aaacataggcatatacatttctatcattttattctctggaatcaacaaatataacttgaaataaacacaccct 48916021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 13653748 - 13653884
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  13653748 ttctcatctccatgggaactttattcccaccattttctttgggaaattttttctattcccaggaacattttatatccgggaataaaatttagtaaacttg 13653847  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||| || ||||||| ||| |||||||||||||    
T  13653848 taacaaacgtatacatatatatttctatcattttatt 13653884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 180
Target Start/End: Complemental strand, 4683544 - 4683368
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||| |||||||  || |||||||||||||||||| |||||||||||||| ||  ||||||||||||||||| |||||||    
T  4683544 catctccatgggaactttattccc-cccttttttttgggaaattttttctattcctaggaacattttatatccgggaataaaatttagtaaatttgtaac 4683446  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaatt 180  Q
    |||||||  |||||||||||||||||||||||| | ||||||||| |||||||| ||  |||||| ||||||| ||||    
T  4683445 aaacataggcatatacattcctatcattttatttctgggaatcaacaattataaattgaaacaaagacacccttaatt 4683368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 29091573 - 29091739
Alignment:
Q  11 catgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    ||||||||||||||||||||| ||||  || |||||||||||||||||| | ||||||||| ||| | ||||||||||||||||||||||||||||||||    
T  29091573 catgggaactttattcccacctttttttttgggaaattttttctattccgatgaacattttttactcgagaataaaatttagtaaacttgtaacaaacat 29091672  T
Q  111 aaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    | ||||||| |||  ||||||||||||  | |||||||| || ||||||||  ||||||||||||||    
T  29091673 agacatatatatttttatcattttattatcaggaatcaacaaatataacttgaaacaaacacaccct 29091739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 46960527 - 46960634
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46960527 tcatcttcatgggaactttattcccacccttttcattgggaaaacttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaa 46960626  T
Q  104 caaacata 111  Q
    ||||||||    
T  46960627 caaacata 46960634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 37436795 - 37436638
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||| |||||||||| || ||||| |||| |||||| ||| ||||||||||| || | ||||||||||||||||||||    
T  37436795 ttctcatctccatgggaactttattctcacccttttctttgggaaaatttt-ctattctcagtaacattttatatccgaaaataaaatttagtaaacttg 37436697  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataac 159  Q
    |||||||||||  ||||||||||||||||||||||||  || ||||||| || ||||||    
T  37436696 taacaaacatatgcatatacattcctatcattttattctcgtgaatcaacaaatataac 37436638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 1007663 - 1007819
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    ||||||| ||||||||| ||| | ||| ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||| || |||||||    
T  1007663 tttattctcaccctttttcttggtaaaatttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacctagacatata 1007762  T
Q  120 cattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
     |||| ||||||||||||  |||||||||| || ||||||||  |||||||||||||    
T  1007763 tattcatatcattttattctcgggaatcaacaaatataacttgaaacaaacacaccc 1007819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 17475482 - 17475360
Alignment:
Q  15 ggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaac 114  Q
    |||||||||||||||| |||||| || ||||||||| | ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  17475482 ggaactttattcccactcttttctttgggaaattttatttattcccaggaacattttatacccgggaataaaatttagtaaacttataacaaacataaac 17475383  T
Q  115 atatacattcctatcattttatt 137  Q
    ||||| ||| ||||| |||||||    
T  17475382 atatatatttctatcgttttatt 17475360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 52699637 - 52699463
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||||||||| || |||||  | |||||||||||||||| ||||||||||  |||||||||| ||||||||||||||    
T  52699637 catctccatgggaactttattcccacccttttctttgggaaaaatgttctattcccaggaacgttttatacccgggaataaaattcagtaaacttgtaac 52699538  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  ||| |  ||||||||||||||||| || |||||| |  | ||||||||  ||||||| ||||||||    
T  52699537 aaacataggcatgtgtattcctatcattttattcccaggaatctacgaatataacttgaaacaaacgcaccctaa 52699463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 5806428 - 5806290
Alignment:
Q  35 ttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcatttt 134  Q
    |||||| | ||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    |  |||||||||| ||||||||||    
T  5806428 ttccttggaaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaa----aggcatatacatttctatcatttt 5806333  T
Q  135 attgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||| ||||||||||| |||||||||||  ||||||||||||||    
T  5806332 attcccgggaatcaacaattataacttgaaacaaacacaccct 5806290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 11014616 - 11014470
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||| |||||||||| ||||||||||| || | || |||||||||||||||| ||||||||||| ||  ||||| |||||| ||||||||    
T  11014616 ttctcatcttcatgagaactttatttccacccttttcttttgaaatttttttctattcccagaaacattttatatccgtgaatataatttattaaacttg 11014517  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatc 147  Q
    ||||||||||| |||| || ||| ||||||||||||| || ||||||    
T  11014516 taacaaacatagacatgtatatttctatcattttattcccaggaatc 11014470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 13521218 - 13521349
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||  ||| ||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||    
T  13521218 ttctcatctttctggaaactttatttccacccttttctttgggaaattttttctattcccaagaacattttatactcgtgaataaaatttagtaaacttg 13521317  T
Q  101 taacaaacataaacatatacattcctatcatt 132  Q
    ||||||||| | |||| || ||| ||||||||    
T  13521318 taacaaacacagacatgtatatttctatcatt 13521349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 31806929 - 31806759
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||||||||||||| ||||||||||  || |||| |||||||||||||||||||| ||||||   | |||||||||||||||||||  |    
T  31806929 ttctcatcttcatgggaactttatttccacccttttatttgggaatttttttctattcccaggaacgttttatgttcgagaataaaatttagtaaac--g 31806832  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacaca 171  Q
    |||||||||||| ||| || ||| |||||||||||||  | |||||| | || ||||||||  ||||||||||    
T  31806831 taacaaacataagcatgtatatttctatcattttattctcaggaatctacaaatataacttgaaacaaacaca 31806759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 19083264 - 19083144
Alignment:
Q  17 aactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacat 116  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||| ||||||||||| ||||    
T  19083264 aactttatttccacccttttctttgggaaattttttctatttccaggaacattttatactcgtgaataaaatttagtaaacttataacaaacatagacat 19083165  T
Q  117 atacattcctatcattttatt 137  Q
     || ||| |||||||| ||||    
T  19083164 gtatatttctatcattgtatt 19083144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 19131152 - 19131032
Alignment:
Q  17 aactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacat 116  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||| ||||||||||| ||||    
T  19131152 aactttatttccacccttttctttgggaaattttttctatttccaggaacattttatactcgtgaataaaatttagtaaacttataacaaacatagacat 19131053  T
Q  117 atacattcctatcattttatt 137  Q
     || ||| |||||||| ||||    
T  19131052 gtatatttctatcattgtatt 19131032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24116510 - 24116392
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||||| |||||||||| |||||||| || |||| | |||| ||||  ||||||| ||||||||||  |||||||||||||||||||||    
T  24116510 ttctcatcttcatgggagctttattccctcccttttctttgggaattcttttttatttacaggaacgttttatacccgggaataaaatttagtaaacttg 24116411  T
Q  101 taacaaacataaacatata 119  Q
    | |||||||||||||||||    
T  24116410 tgacaaacataaacatata 24116392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 173
Target Start/End: Complemental strand, 13932050 - 13931885
Alignment:
Q  9 ttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaac 108  Q
    |||||||||| |||||||||||||||||| ||||||||   |||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||    
T  13932050 ttcatgggaaatttattcccacccttttctttaggaaaacatttctattcc-aggaacattttatacccggaaataaaatttagtaaacttgtaacaaac 13931952  T
Q  109 ataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||  |||||  |||  ||| |||||||| |  |||||| | || ||||||||  ||||||||||||    
T  13931951 ataggcatatgtatttttatgattttattcctaggaatctacaaatataacttcaaacaaacacacc 13931885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 29769411 - 29769526
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttcctt-aggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgta 102  Q
    |||||||||||| |||||||||||||||||||| ||| |||||| || ||||||| |||||||||||||||  | ||||||||||||||||||  |||||    
T  29769411 tcatcttcatggaaactttattcccaccctttttctttaggaaaattgttctattgccaggaacattttatgtcaaagaataaaatttagtaattttgta 29769510  T
Q  103 acaaacataaacatat 118  Q
    ||||||||| ||||||    
T  29769511 acaaacatagacatat 29769526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30240907 - 30241042
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||| ||||||||||| ||| |||||| || |||| |||||||||||||||  ||| |||||| ||   |||||||||||| ||||||||    
T  30240907 ttctcatcttcatgagaactttattctcactcttttctttgggaatttttttctattcccaataactttttattccgg-gaataaaatttaataaacttg 30241005  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||  |||||| ||| |||||||||||||    
T  30241006 taacaaacataggcatatatatttctatcattttatt 30241042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1228053 - 1227943
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||| |||||||||||||||||||||||  ||||||| || |||||| ||||||||||| || |||||||||||||  | ||||||||||| ||||||||    
T  1228053 ttctaatcttcatgggaactttattcccgaccttttctttcggaaatcttttctattccaagaaacattttatacctgaaaataaaatttaataaacttg 1227954  T
Q  101 taacaaacata 111  Q
    |||||| ||||    
T  1227953 taacaagcata 1227943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 49823068 - 49822916
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||                     ||||||||||||||||||||    
T  49823068 tcatctccatgggaactttattcccacccttttccttgggaaattttttctattctcag---------------------aaaatttagtaaacttgtaa 49822990  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||  |||||||||| ||||||||||||| ||| ||||||| |||||||||||  ||||||||||||||    
T  49822989 caaacataggcatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 49822916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 32202484 - 32202395
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagta 94  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| | || |||| |||||||    
T  32202484 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccataaacattttataccaaggattaaattttagta 32202395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 13440291 - 13440428
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaatttt--ttctattcccaggaacattttatacccaagaataaaatttagtaaact 98  Q
    ||||||||||||||| ||||||||| ||||||||||| || |||| ||||  |||||||| |||||||||||||||| |  ||||||||||||||||| |    
T  13440291 ttctcatcttcatggaaactttatttccacccttttcttt-ggaatttttttttctattctcaggaacattttatactcgtgaataaaatttagtaaaat 13440389  T
Q  99 tgtaacaaacataaacatatacattcctatcattttatt 137  Q
    | |||||||||||  ||| || ||| |||||||| ||||    
T  13440390 tctaacaaacatagtcatttatatttctatcattgtatt 13440428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 9011325 - 9011200
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaa-cattttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    |||||||||||||||| ||||||||| || |||||  ||||| |||| || ||| | ||||||||| || ||||||||||||||||||||||| ||||||    
T  9011325 atgggaactttattccgacccttttctttgggaaaaattttcgattctcacgaaaccttttataccgaa-aataaaatttagtaaacttgtaataaacat 9011227  T
Q  111 aaacatatacattcctatcattttatt 137  Q
    | |||| || |||||||||||||||||    
T  9011226 agacatgtatattcctatcattttatt 9011200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 47677544 - 47677657
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||||||||||||| ||||| | || |||||  ||||||||||   ||||||||||||||||   |||||||||||||||| || ||||    
T  47677544 catcttcatgggaactttattcccatcctttcctttgggaaaacttttctattcaatggaacattttatacccggaaataaaatttagtaaatttataac 47677643  T
Q  105 aaacataaacatat 118  Q
    ||||| ||||||||    
T  47677644 aaacacaaacatat 47677657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 20505111 - 20505028
Alignment:
Q  54 tattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||| ||||||||| |  |||||||||||||||||||||||||||||||| |||| || ||| |||||||||||||    
T  20505111 tattcccaggaatattttatactcgtgaataaaatttagtaaacttgtaacaaacatagacatgtatatttctatcattttatt 20505028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 38519228 - 38519126
Alignment:
Q  9 ttcatgggaactttattcccac-ccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaa 107  Q
    |||||||||||||||||||||  ||||||| || ||||| |||||||  |||||  |||||||||||||   ||||||||||||||||||||||||||||    
T  38519228 ttcatgggaactttattcccaaaccttttctttgggaaaatttttct--tcccaaaaacattttatacctgggaataaaatttagtaaacttgtaacaaa 38519131  T
Q  108 cataa 112  Q
    |||||    
T  38519130 cataa 38519126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 137
Target Start/End: Complemental strand, 52186172 - 52186085
Alignment:
Q  50 tttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||| ||||||||||   |  |||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||    
T  52186172 tttctattcccagaaacattttatcgtcgggaataaaatttagtaaacttgtaacaaatatagacatatatatttctatcattttatt 52186085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33702518 - 33702381
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttataccc-aagaataaaatttagtaaactt 99  Q
    |||||||| ||||||||| ||||||| |||| ||||  |  ||||||||||||||||||| | || |||| || ||| || ||||||||||| |||| ||    
T  33702518 ttctcatcgtcatgggaattttattctcacctttttattcgggaaattttttctattccctgaaaaatttaattccccaaaaataaaatttaataaattt 33702419  T
Q  100 gtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||| |||  ||||| ||| |||||||||||||    
T  33702418 gtaacaaacttaagaatatatatttctatcattttatt 33702381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 175
Target Start/End: Complemental strand, 32202393 - 32202330
Alignment:
Q  114 catatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||| |||||||||||||  |||||||||| |||||||||||  ||||||||||||||    
T  32202393 catatacatttctatcattttattttcgggaatcaacaattataacttgaaacaaacacaccct 32202330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 38602234 - 38602298
Alignment:
Q  48 tttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataa 112  Q
    |||||||||||||   || ||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  38602234 tttttctattcccttaaatattttatacacaagaataaaatttactaaacttgtaaaaaacataa 38602298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 19094013 - 19094120
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||| ||||||||||||||||||||||  ||||| || ||||  || ||  |||  ||||||||||||||| | |  ||||||||||| |||||||| ||    
T  19094013 tcatattcatgggaactttattcccacagttttctttgggaatgttatttcattatcaggaacattttatatctagaaataaaatttaataaacttgcaa 19094112  T
Q  104 caaacata 111  Q
    ||||||||    
T  19094113 caaacata 19094120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 3939503 - 3939573
Alignment:
Q  67 attttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||| ||||| | ||||||||||||| ||||||||||||||||||| ||| || ||| |||||||| ||||    
T  3939503 atttcatacctaggaataaaatttagcaaacttgtaacaaacataagcatgtatatttctatcattctatt 3939573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 37261764 - 37261880
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    ||||||| || ||||||  || ||||||||||||||||||||  || |||||||  |   |||||||||||| |||||||||||||||||||  ||| ||    
T  37261764 tttattctcaaccttttttttgggaaattttttctattcccaaaaagattttatgtcgg-gaataaaatttaataaacttgtaacaaacatatgcatgta 37261862  T
Q  120 cattcctatcattttatt 137  Q
     ||| |||| ||||||||    
T  37261863 tatttctataattttatt 37261880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 37336570 - 37336514
Alignment:
Q  50 tttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaa 106  Q
    ||||||||||||  || |||||||| |  ||||||||||||||||||||||||||||    
T  37336570 tttctattcccaataatattttatatctgagaataaaatttagtaaacttgtaacaa 37336514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11077952 - 11078051
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| || |||||||||||||   |||| ||||  || ||||| ||||||||||||||  ||||| ||||| |||  ||||||||||| ||||||||    
T  11077952 ttctcattttaatgggaactttatgttcaccttttttttttggaaaatttttctattcccaaaaacatgttatatccagaaataaaatttaataaacttg 11078051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 52276877 - 52276921
Alignment:
Q  61 aggaacattttatacccaagaataaaatttagtaaacttgtaacaaa 107  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||    
T  52276877 aggaacattttatatcc--gaataaaatttagtaaacttgtaacaaa 52276921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 16257116 - 16257074
Alignment:
Q  68 ttttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||    
T  16257116 ttttatacctaagaataaaatttaataaacttgtaaaaaacat 16257074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 31043557 - 31043461
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaact 98  Q
    ||||||| |||||| |||||||||||| |||||||   ||| |||| || ||  |||||||| |||||| || |||||| ||||||||||| ||||||    
T  31043557 ttctcatattcatgagaactttattccaaccctttat-ttatgaaacttgtttcattcccagtaacattatagacccaaaaataaaatttaataaact 31043461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 18412105 - 18412281
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18412105 ttctcatctccatgggaactttattcccacctttttccttgggaaattttttctattcccaggaacattttatacccgagaataaaatttagtaaacttg 18412204  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||| |||||||||||  ||||||||||||||    
T  18412205 taacaaacataggcatatacattcctatcattttattcccaggaatcaataattataacttgaaacaaacacaccct 18412281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 176
Target Start/End: Complemental strand, 19065676 - 19065503
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  19065676 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccggaaataaaatttagtaaacttgtaac 19065577  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  19065576 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacacccta 19065503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 4765731 - 4765559
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  4765731 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaac 4765632  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  4765631 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 4765559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 12970701 - 12970529
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12970701 catctccatggaaactttattcccacccttttccttaagaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 12970602  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  12970601 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 12970529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 8646566 - 8646412
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  8646566 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataaccgggaataaaatttagtaaacttg 8646467  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaatta 155  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  8646466 taacaaacatagacatatacattcctatcattttattcccgggaatcaacaatta 8646412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 29543190 - 29543014
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29543190 ttctcatctccatgggaactttattcccaccctttttcatgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttg 29543091  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||||| ||||||||||||| ||||||||||| || |||||||| |||||||||||  ||||||||||||||    
T  29543090 taacaaacatagacatatacattccaatcattttattcccaggaatcaacaattataacttgaaacaaacacaccct 29543014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 555877 - 555705
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||    
T  555877 catctccatggaaactttattcccacccttttccttgggaaattttttctattccctggaacattttataccaaggaataaattttagtaaacttgtaac 555778  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  555777 aaacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 555705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 22936083 - 22935907
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||  ||||||||||||||    
T  22936083 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaac 22935984  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaat 179  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  22935983 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaat 22935907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 32535837 - 32535995
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |  |||||| |||||||||||||||||    
T  32535837 catctccatgggaactttattcccacccttttccttaggaaattttttctattcccaataacattttataccaagaaataaattttagtaaacttgtaac 32535936  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataacttaa 163  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||    
T  32535937 aaacataaacatatacatttctatcattttattcctgggaatcaacaattataacttaa 32535995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 14206992 - 14206820
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||    
T  14206992 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaac 14206893  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||| ||||||||||||| |||| |||||| |||||||||||  ||||||||||||||    
T  14206892 aaacataggcatatacatttctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 14206820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 27481253 - 27481429
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||| |||||| |||||||||||  |||||||||||||||||||||    
T  27481253 ttctcatcttcatgggaactttattcccacccttttccttgggaaatattttttattctcaggaatattttatacccgggaataaaatttagtaaacttg 27481352  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||  |||||||||||||||||||||||| ||   ||||||||||||||||||  ||||||||||||||    
T  27481353 taacaaacataggcatatacattcctatcattttatttccaaaaatcaaaaattataacttgaaacaaacacaccct 27481429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 36703770 - 36703945
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  36703770 ttctcatctccataggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttg 36703869  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||||||||||| ||||||||||| ||||||||||||| |||  |||||| |||||||||||  |||||||||||||    
T  36703870 taacaaacatagacatatacatttctatcattttattcccgataatcaacaattataacttgaaacaaacacaccc 36703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 28602456 - 28602629
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||   |||||||||||||||||||||||||    
T  28602456 catctccatgggaactttattcccacccttttccttgggaaattttttctattctcagaaacattttataccgg-gaataaaatttagtaaacttgtaac 28602554  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  28602555 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 28602629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 11855826 - 11855658
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  11855826 catctccatggaaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaac 11855727  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacaca 171  Q
    |||||||  ||||||||||||||||||||||||  | |||||||| |||||||||||  ||||||||||    
T  11855726 aaacataggcatatacattcctatcattttattctcaggaatcaacaattataacttgaaacaaacaca 11855658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 6091611 - 6091771
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  6091611 ttctcatctccatgggaactttattcccactcttttccttgggaaaatttttctattcccaagaacattttataccaaggaataaattttagtaaacttg 6091710  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||||||  ||||||||||  |||||||||||| ||||||||||| |||||||||||    
T  6091711 taacaaacataggcatatacatttatatcattttattcccgggaatcaacaattataactt 6091771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 42012354 - 42012176
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||| |||| |||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | |||||||||||||||||| |||    
T  42012354 ttctgatctccatgtgaactttattcccacccttttccttcggaaattttttctattcctaggaacattttatactcgagaataaaatttagtaaatttg 42012255  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||||||| ||||||  ||| ||||||||||||| ||| ||||||| || |||| |||  ||||||||||||||||    
T  42012254 taacaaacatagacatatgtatttctatcattttattcccgagaatcaacaaatatagcttcaaacaaacacaccctaa 42012176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 8406794 - 8406950
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  8406794 catctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagcaaacttgtaac 8406893  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||| |||  ||| ||||||||||||||||||||  ||  |||||| |||||||||||    
T  8406894 aaatataggcatgtacattcctatcattttattctcgaaaatcaacaattataactt 8406950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 27480906 - 27481041
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||| |||||||||| |||| |||||||| | |||  ||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  27480906 ttctcatctccatggaaactttattctcacc-ttttccttggaaaaaattttctattcccatgaacattttatacacaggaataaaatttagtaaacttg 27481004  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||| ||||| | |||||||||||||||||    
T  27481005 taacaaacatagacatacatattcctatcattttatt 27481041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 17251711 - 17251844
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||| ||||||||||||| | ||||| || ||||||||||||||||  || ||||||||||||| | |||||||||||||||||| || |||    
T  17251711 tcatcttcatggaaactttattcccatcattttctttgggaaattttttctattatcatgaacattttatactcgagaataaaatttagtaaaattataa 17251810  T
Q  104 caaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||| || ||| |||||||||||||    
T  17251811 caaacataaacatgtatatttctatcattttatt 17251844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 20962486 - 20962622
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||| |||||||| |||||||||||||||| |||||  |||||||||||||| ||| ||||||| || ||||||||||||||||||||||    
T  20962486 ttctcatctccatgagaactttactcccacccttttccttgggaaaaattttctattcccagaaacgttttatatccgagaataaaatttagtaaacttg 20962585  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||  ||  |  |||||||||||||||||    
T  20962586 taacaaacataggcacgtgtattcctatcattttatt 20962622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 35348699 - 35348566
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||  |||||||||||||||| |||| |||||||||||||||    
T  35348699 ttctcatcttcatgggaactttattcccacccttttctttgggaaa-attttctattcccaaaaacattttatacccaa-aatacaatttagtaaacttg 35348602  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||| |||| || ||| ||||| |||||||    
T  35348601 taacaaacatagacatgtatatt-ctatctttttatt 35348566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 43347070 - 43346895
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||||||||||||||||||||||||| || | |||  ||||||||| |||| |||| ||||||||   |||||||||||||||||||||    
T  43347070 ttctcatcttcatgggaactttattcccacccttttcattggaaaaacttttctattgccagaaacaatttatacctgggaataaaatttagtaaacttg 43346971  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||||||||| | ||||||  |||  ||| ||||||||  | |||||| | || ||||||||  |||||||||||||    
T  43346970 taacaaacacatacatatgtatttttatgattttattttcaggaatctacaaatataacttgaaacaaacacaccc 43346895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 6930541 - 6930700
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||||||  || |||||||| || | ||||||||||||||||||||||||    
T  6930541 catcttcatgggaactttattcccacaattttctttgggaaattttt-ctattcccaataatattttatatccgaaaataaaatttagtaaacttgtaac 6930639  T
Q  105 aaacataaacatatacat----tcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||||||||||| ||    | |||||||||||||  | |||||||| || ||||||||    
T  6930640 aaacataaacatatatatatatttctatcattttattctcaggaatcaacaaatataactt 6930700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 19089888 - 19089777
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||| ||||||||| |||| | ||||| || ||||||||||||||||||||  ||| |||||||| ||||||||||||||| ||||||| ||||    
T  19089888 catcttcatgagaactttatacccatcattttctttgggaaattttttctattcccaaaaacgttttatactcaagaataaaatttaataaacttataac 19089789  T
Q  105 aaacataaacat 116  Q
    ||||||||||||    
T  19089788 aaacataaacat 19089777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 31583225 - 31583102
Alignment:
Q  13 tgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataa 112  Q
    ||||||||||||||||||| ||||| || | ||||||||||||||||  ||||| |||||||| |  ||||||||||||||||||||||||||||||||     
T  31583225 tgggaactttattcccacctttttctttggaaaattttttctattcctgggaacgttttatactcgggaataaaatttagtaaacttgtaacaaacatag 31583126  T
Q  113 acatatacattcctatcattttatt 137  Q
    ||| ||| ||| ||||| |||||||    
T  31583125 aca-atatatttctatcgttttatt 31583102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 9101303 - 9101362
Alignment:
Q  175 taaattctttcctaactttaattaaggtgagtgaatttctttttcttccgggttttcctc 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9101303 taaattctttcctaactttaattaaggtgagtgaatttctttttcttccgggttttcctc 9101362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 40275926 - 40275813
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||||||||||||| | ||||| || |||||  ||||||||||||||||| |||| ||| |   ||||||||||||| |||||||||||    
T  40275926 catcttcatgggaactttattcccatcattttctttgggaaaacttttctattcccaggaatatttcatatctgggaataaaatttagcaaacttgtaac 40275827  T
Q  105 aaacataaacatat 118  Q
    ||||||| ||||||    
T  40275826 aaacatagacatat 40275813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 30899470 - 30899583
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    ||||||| |||||||||| || | ||||| |||||||||||| ||| |||||||| ||| ||||||||||||| |||||||||||| |||||| ||| ||    
T  30899470 tttattctcacccttttctttggaaaattgtttctattcccaagaatattttatatccaggaataaaatttagaaaacttgtaacatacataagcatgta 30899569  T
Q  120 cattcctatcattt 133  Q
     |||  ||||||||    
T  30899570 tattaatatcattt 30899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1664626 - 1664754
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||| || |||||||||| |||| || |||||   ||||||||| ||||||||||||||| |    ||||||||||||| || |||    
T  1664626 ttctcatctccatgggaatttaattcccacccgtttctttgggaaaaaatttctattctcaggaacattttatagctggtaataaaatttagtcaatttg 1664725  T
Q  101 taacaaacataaacatatacattcctatc 129  Q
    |||||||||||| |||||| ||| |||||    
T  1664726 taacaaacataagcatatagatttctatc 1664754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 41783792 - 41783685
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaa-ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||| |||| ||||||||||||| |||||| ||| | |   |||||||||||  ||| ||||||||||| || ||||||||||||||||||||| |||    
T  41783792 catctttatggaaactttattcccaacctttttctttgaattcttttttctattttcagaaacattttatatccgagaataaaatttagtaaacttataa 41783693  T
Q  104 caaacata 111  Q
    ||||||||    
T  41783692 caaacata 41783685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 15200676 - 15200585
Alignment:
Q  45 aattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||| ||||| |||||||||| ||  ||||||||||||| |||| || ||||||||||| ||||||| |||  ||||||||||||    
T  15200676 aattttttctat-cccagaaacattttatgcctgagaataaaatttaataaatttataacaaacatagacatatatatttatatcattttatt 15200585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 26637139 - 26637045
Alignment:
Q  80 gaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||||||||||||||||||||||||||| ||| ||||||| | | ||||||||||||| ||   |||||| || ||||||||  |||||||||||    
T  26637139 gaataaaatttagtaaacttgtaacaaatatagacatatataattctatcattttattcccattaatcaacaaatataacttgaaacaaacacac 26637045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28023728 - 28023844
Alignment:
Q  1 ttctcatcttcatgggaa-ctttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaactt 99  Q
    ||||||||||| || ||| |||||||| |||||||||  ||  |||||||||||||||||||   ||||||||||    ||||||||||||| | |||||    
T  28023728 ttctcatcttcgtgagaaactttattctcacccttttgtttgagaaattttttctattcccaaacacattttatatgtgagaataaaatttaatgaactt 28023827  T
Q  100 gtaacaaacataaacat 116  Q
    |||||||| ||| ||||    
T  28023828 gtaacaaatatagacat 28023844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 28429676 - 28429733
Alignment:
Q  80 gaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||||||||||||||||||| |||  ||| || ||| |||||||||||||    
T  28429676 gaataaaatttagtaaacttgtaacaaatataggcatgtatatttctatcattttatt 28429733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 36978267 - 36978210
Alignment:
Q  80 gaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||| ||||  |||||||||||||| ||||||| ||| |||||||||||||    
T  36978267 gaataaaattttgtaagtttgtaacaaacatagacatatatatttctatcattttatt 36978210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 15776261 - 15776182
Alignment:
Q  28 cacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaac 108  Q
    |||||||||| || ||||| |||||||||| |||| || ||||||||  ||| |||||||||||||||| |||||| ||||    
T  15776261 cacccttttcttt-ggaaactttttctattaccagaaatattttataatcaaaaataaaatttagtaaatttgtaagaaac 15776182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 16720321 - 16720277
Alignment:
Q  67 attttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||    
T  16720321 attttatacccgataataaaatttagtaaacttgcaacaaacata 16720277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 3913327 - 3913239
Alignment:
Q  47 ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||| |  |||||||||||||   ||||||||||||||||| |||||| ||||||| |||| || ||| ||||| |||||||    
T  3913327 ttttttctattcctaa-aacattttatacctg-gaataaaatttagtaaatttgtaataaacatacacatgtatatttctatcgttttatt 3913239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 40715228 - 40715187
Alignment:
Q  47 ttttttctattcccaggaacattttatacccaagaataaaat 88  Q
    |||||||||||||| | |||||||||||| ||||||||||||    
T  40715228 ttttttctattccccgaaacattttatactcaagaataaaat 40715187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 830115 - 830059
Alignment:
Q  81 aataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||| |||||||||||||||||||  |||||| |||  |||| |||||||    
T  830115 aataaaatttaataaacttgtaacaaacatattcatatatattgatatctttttatt 830059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 35818595 - 35818420
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  35818595 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 35818496  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  35818495 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 35818420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 12710541 - 12710719
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  12710541 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttg 12710640  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  12710641 taacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 12710719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 1554525 - 1554353
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  1554525 catctccatggaaactttattcccacccttttccttgagaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 1554426  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  1554425 aaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 1554353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 178
Target Start/End: Original strand, 38363981 - 38364156
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  38363981 catctccatgggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 38364080  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  38364081 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 38364156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 37392717 - 37392543
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  37392717 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaac 37392618  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||| |||||||||    
T  37392617 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaatacaccctaa 37392543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 18298008 - 18298168
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18298008 ttctcatttccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttg 18298107  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||||||   ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18298108 taacaaacataggtatatacattcctatcattttattcccgagaatcaaaaattataactt 18298168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 16313682 - 16313504
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  16313682 ttctcatctccatgggaactttattcccaccatttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttg 16313583  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||   ||||||||||||||||||||||| |||| |||||| |||||||||||  ||||||||||||||||    
T  16313582 taacaaacataggtatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccctaa 16313504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 26602112 - 26601956
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  26602112 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaagaacattttata-ccaggaataaaatttagtaaacttg 26602014  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataa 158  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||| ||||||||    
T  26602013 taacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataa 26601956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3049905 - 3050065
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||||||||| || | || |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  3049905 ttctcatctccatgggaactttattcccacccttttctttggaaatttttttctattcccaggaacattttatacccgggaataaaatttagtaaacttg 3050004  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  3050005 taacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataactt 3050065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 32661105 - 32660932
Alignment:
Q  5 catcttcatgggaactttattcccacccttttcc-ttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  32661105 catctccatgggaactttattcccacccttttcccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaa 32661006  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||  |||||||||||||||||||||||| || |||||||| |||||||||||  ||||||||||||||    
T  32661005 caaacataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaacacaccct 32660932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 18726791 - 18726619
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaatttttt-ctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  18726791 catctccatgagaactttattcccacccttttccttgggaaatttttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaa 18726692  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  18726691 caaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 18726619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 38132909 - 38132733
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaatttttt-ctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  38132909 catctccatgagaactttattcccacccttttccttgggaaatttttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaa 38132810  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    |||||||| ||||||||||| ||||||||||||| ||| ||||||| |||||||||||  |||||||||||||||||    
T  38132809 caaacatagacatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccctaaa 38132733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 25837807 - 25837985
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||| ||||||||||  || ||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  25837807 ttctcatctccatgggaactttattgccacccttttttttgggaaaatttttctattcccaggaacattttatacccgggaataaaattttgtaaacttg 25837906  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||  ||| |||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  25837907 taacaaacataggcatgtacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 25837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 7931139 - 7931295
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| |||||||||||| ||||    
T  7931139 catctccatgggaactttattcccacccttttccttgggaaattttttctattctcaggaacattttataccaaggaataaattttagtaaacttataac 7931238  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||| ||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  7931239 aaacatatacatatacatttctatcattttattcccaggaatcaacaattataactt 7931295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42755763 - 42755937
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||    
T  42755763 ttctcatctccatgagaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacaaaggaataaattttagtaaacttg 42755862  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||| ||||||  |||||||||| ||||||||||||| || |||||||| |||||||||||  ||||||||||||    
T  42755863 taactaacataggcatatacatttctatcattttattcccaggaatcaacaattataacttgaaacaaacacacc 42755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 176
Target Start/End: Complemental strand, 41228884 - 41228712
Alignment:
Q  6 atcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaaca 105  Q
    |||| ||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  41228884 atctccataggaactttattcccacccttttcctcgggaaattttttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaaca 41228785  T
Q  106 aacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    ||| ||  |||||||||||||| ||||||||| |||||||| || |||||||||||  |||||||||||||||    
T  41228784 aacgtaggcatatacattcctaccattttattcccgggaattaacaattataacttgaaacaaacacacccta 41228712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 26062044 - 26062216
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||| | ||||||| |||||||||||||||||    
T  26062044 catctccatgggaactttattcccaccctttttcttgggaatttttttctattcccagggacattttataccaaggaataaattttagtaaacttgtaac 26062143  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||   ||||||||| ||||||||||||| ||| ||||||| |||||||||||  ||||||||||||||    
T  26062144 aaacataggaatatacatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccct 26062216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29421664 - 29421528
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||| ||||||||||||||| || ||||||||||| ||||||||||||| ||||||||    
T  29421664 ttctcatctccatgggaactttattcccaccattttctttgggaaaatttttctattcccagaaatattttatacccgagaataaaatttaataaacttg 29421565  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  29421564 taacaaacataaacatatatatttctatcattttatt 29421528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 10896387 - 10896217
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||| ||| |    |||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  10896387 catctccatgggaactttattcccaccctttttctt-gatttttttttctattcccaggaacattttataccaaggaataaattttagtaaatttgtaac 10896289  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||| ||||||||||||| | ||||||||| |||||||||||  |||||||||||||    
T  10896288 aaacataggcatatacatttctatcattttattcctgggaatcaacaattataacttgaaacaaacacaccc 10896217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 40197232 - 40197091
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    |||||||||||| ||||||||   |  |||||||||||||||| ||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||    
T  40197232 tttattcccacctttttccttgaaattttttttctattcccagaaacattttatatcaaagaataaattttagtaaacttataacaaacataaacatata 40197133  T
Q  120 cattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||| ||||||||||||| ||||||||||| |||||||||||    
T  40197132 catttctatcattttatttccgggaatcaacaattataactt 40197091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 5020664 - 5020487
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||| ||| |||| ||||||||||||||||     
T  5020664 catcttcatgggaactttattcccacccttttccttgggaaaatttttctattcacagaaacattttatacccgagagtaaactttagtaaacttgtaag 5020565  T
Q  105 aaacataaacatatacat---tcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||| ||   ||||||||||||||| ||  ||||||| || ||||||||  ||||||||||| ||||    
T  5020564 aaacatatgcatatatattcctcctatcattttattcccatgaatcaacaaatataacttgaaacaaacacactctaa 5020487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 33444798 - 33444627
Alignment:
Q  2 tctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgt 101  Q
    |||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||||| ||  |||||||||||||| |||||||    
T  33444798 tctcatcttcatgggaactttattcccaccattttctttgggcaattttttctattcccaagaacattttata-ccgggaataaaatttagt-aacttgt 33444701  T
Q  102 aacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||||||||| ||||||| |||  ||||||||||||  | |||||||| || ||||||||  ||||||||||||    
T  33444700 aacaaacatagacatatatatttttatcattttattctcaggaatcaacaaatataacttgaaacaaacacacc 33444627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15226861 - 15226977
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||||||||||||||||||||||||| || |||| | |||||||||| |||||| |||||||||||   ||||||||||||||||||||    
T  15226861 ttctcatcttcatgggaactttattcccacccttttctttgggaa-tcttttctattcgcaggaatattttatacccggaaataaaatttagtaaacttg 15226959  T
Q  101 taacaaacataaacatat 118  Q
    ||||||||||||||||||    
T  15226960 taacaaacataaacatat 15226977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 35394300 - 35394465
Alignment:
Q  15 ggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaac 114  Q
    ||||||||||||||||| |||| ||| | || ||||||||||| |   |||||||||||||||  |||||||||||||||||||||||||||||||| ||    
T  35394300 ggaactttattcccaccatttttcttggaaatttttttctattacgtagaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagac 35394399  T
Q  115 atatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    ||||| ||| || ||||||||||  || ||||||| || ||||||||  |||||||| ||||||||    
T  35394400 atatatatttctttcattttattctcgtgaatcaataaatataacttgaaacaaacaaaccctaaa 35394465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 7317275 - 7317445
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| |||| ||| ||||| ||||||||| || ||||||| |||||| ||  |||||||||||||||||||||||||    
T  7317275 catctccatgggaactttattcccaccatttttcttgggaaaatttttctat-cctaggaacactttatatccg-gaataaaatttagtaaacttgtaac 7317372  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||| |||||||||||||||||   |  |||||| || ||||||||  ||||||||||||||    
T  7317373 aaacataggcatatatattcctatcattttatttttgaaaatcaacaaatataacttgaaacaaacacaccct 7317445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 41432642 - 41432782
Alignment:
Q  6 atcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaaca 105  Q
    |||| ||||||||||||||| |||||||||| ||  |||||  |||||||||||||  ||| |||||||||   ||||||||||||||||||||||||||    
T  41432642 atctccatgggaactttatttccaccctttttctagggaaaaattttctattcccataaacgttttataccgg-gaataaaatttagtaaacttgtaaca 41432740  T
Q  106 aacataaacatatacattcctatcattttattgccgggaatc 147  Q
    ||||||||||| |  ||||||||||||||||| || ||||||    
T  41432741 aacataaacatgtgtattcctatcattttattcccaggaatc 41432782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 21137307 - 21137134
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| || | |||||||||| ||||| ||||| || | ||| | ||| ||||||||  ||||||||||||||  |||||||||||||||||||||    
T  21137307 ttctcatctccacgagaactttatttccaccattttctttggaaaaatatttatattcccacaaacattttatacccgggaataaaatttagtaaacttg 21137208  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||||||||||  |||||| ||| |||| ||||||||  | |||||||| || ||||||||  |||||||||||    
T  21137207 taacaaacataggcatatatatttctattattttattctcaggaatcaacaaatataacttcaaacaaacacac 21137134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 14764102 - 14763970
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    ||||||||||| |||||||||||||||| ||||| || | |  |||||||||||| || |||||||||||||||  ||||||||||||||||||||| ||    
T  14764102 tcatcttcatgtgaactttattcccacctttttcatt-gaattttttttctattctcatgaacattttatacccgtgaataaaatttagtaaacttgaaa 14764004  T
Q  104 caaacataaacatatacattcctatcattttatt 137  Q
    ||||||||  ||| || ||| |||||||||||||    
T  14764003 caaacatatgcatgtatatttctatcattttatt 14763970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 38437369 - 38437486
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    |||||| ||||||||||| || |||||  |||||||||| ||||||| |||||||||| | |||||||||| |||||||||||||||||||| | ||||     
T  38437369 tttatttccacccttttctttgggaaaaattttctattctcaggaacgttttatacccgaaaataaaattttgtaaacttgtaacaaacatagatatatg 38437468  T
Q  120 cattcctatcattttatt 137  Q
     ||||||||| |||||||    
T  38437469 tattcctatcgttttatt 38437486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 6805798 - 6805698
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||| ||||||||||| |||||||||| ||||||||  ||||||||||||| |||||| |||||| |  |||||||||||||||||||||    
T  6805798 ttctcatctccatgagaactttattctcacccttttctttaggaaaaattttctattcccaagaacatattatactcgggaataaaatttagtaaacttg 6805699  T
Q  101 t 101  Q
    |    
T  6805698 t 6805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19160916 - 19160807
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||  ||||||||||||||||||||| || | |  |||||| |||||||| ||| ||||||||| |  |||| ||||||||||||||||    
T  19160916 ttctcatctccatgacaactttattcccacccttttctttggaattttttttatattcccaagaatattttatacacgggaatgaaatttagtaaacttg 19160817  T
Q  101 taacaaacat 110  Q
    ||||||||||    
T  19160816 taacaaacat 19160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 43872088 - 43872031
Alignment:
Q  54 tattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  43872088 tattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacata 43872031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 16219113 - 16218982
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||  ||||||||||| ||||| || || || |||| |||||||   |||| ||||| ||||  ||||||||| |||||||||||||||    
T  16219113 catcttcatgggaagattattcccacc-ttttctttggggaaattttactattcctgagaacgttttaaaccccggaataaaatctagtaaacttgtaac 16219015  T
Q  105 aaacataaacatatacattcctatcattttatt 137  Q
    |||||||  |||| | ||| ||||| |||||||    
T  16219014 aaacataggcatacatatttctatcgttttatt 16218982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 31117695 - 31117595
Alignment:
Q  11 catgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||  | ||||||||||||  |   ||||||||||| |||| | |||||||||||    
T  31117695 catgggaactttattcccaccctttttcttggaaatttttttctattctgaagaacattttatattcggaaataaaatttaataaaatcgtaacaaacat 31117596  T
Q  111 a 111  Q
    |    
T  31117595 a 31117595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37981961 - 37981857
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| ||||| ||||||||||| ||||||||||||||  ||  ||||||  ||||||| |||| ||||||| |||||||| |||||| |||||||||    
T  37981961 ttctcattttcataggaactttatttccacccttttcctt--gatttttttttaattcccaagaacgttttatatccaagaat-aaattttgtaaacttg 37981865  T
Q  101 taacaaac 108  Q
     |||||||    
T  37981864 aaacaaac 37981857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 175
Target Start/End: Original strand, 34672289 - 34672406
Alignment:
Q  60 caggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataac 159  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||| |||  ||| |||||| |||  ||||||||||||  | |||||||| || || |||    
T  34672289 caggaacattttatatctgagaataaaatttattaaacttgtaataaatgtaagcatatatatttttatcattttattttcaggaatcaacaaatacaac 34672388  T
Q  160 tt--aacaaacacaccct 175  Q
    ||  ||||||||||||||    
T  34672389 ttcaaacaaacacaccct 34672406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 173
Target Start/End: Original strand, 25899548 - 25899702
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    ||||||| |||| ||||| || | |||  ||||||||||| |||||||||| ||||||   ||||||||||| |||||||| |||||||||| ||| ||     
T  25899548 tttattctcaccattttctttggaaaaacttttctattccgaggaacattt-atacccggaaataaaatttaataaacttgcaacaaacatagacacatg 25899646  T
Q  120 cattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    ||||  ||| |||||||| || |||||| | || ||||| ||  ||||||||||||    
T  25899647 catttttatgattttattcccaggaatctacaaatataatttgaaacaaacacacc 25899702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 12650035 - 12650137
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||| ||||||||||||||||||||||  ||||| ||  | ||  ||||||||| ||| ||| ||||||||| ||  ||||||||||| ||| |||||||    
T  12650035 tcattttcatgggaactttattcccactattttctttgcgtaa-attttctatttccatgaatattttatacacagaaataaaatttaataatcttgtaa 12650133  T
Q  104 caaa 107  Q
    ||||    
T  12650134 caaa 12650137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 32901855 - 32901786
Alignment:
Q  42 ggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataa 112  Q
    ||||| |||| |||||||||| ||||||||||| ||| ||||||| |||  ||||||||| ||||||||||    
T  32901855 ggaaaattttcctattcccagaaacattttata-ccatgaataaatttttttaaacttgtgacaaacataa 32901786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 128; Significance: 3e-66; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 201821 - 201999
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||    
T  201821 ttctcatctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaatattttatacccggaaataaaatttagtaaacttg 201920  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  201921 taacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 201999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 143509 - 143645
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  143509 ttctcatctccatgggaactttattcccaccattttctttgggaaattttttctattcccaggaacattttatatccgggaataaaatttagtaaacttg 143608  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||| || ||||||| ||| |||||||||||||    
T  143609 taacaaacgtatacatatatatttctatcattttatt 143645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 119232 - 119352
Alignment:
Q  17 aactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacat 116  Q
    ||||||||| ||||||||||| || | |||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  119232 aactttatttccacccttttctttggaaaaaattttctattcccaggaacattttatactcatgaataaaatttagtaaacttgtaacaaacatagacat 119331  T
Q  117 atacattcctatcattttatt 137  Q
     || ||| |||||||| ||||    
T  119332 gtatatttctatcattgtatt 119352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 14170914 - 14171087
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  14170914 catctccatgggaactttattcccacccttttcctt-ggaaattttttctattcccaggaacattttatatccaggaataaaatttagtaaacttgtaac 14171012  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  14171013 aaacataggcatatagattcctatcattttattcccgggaatcaaaaattataacttgaaacaaacacaccctaa 14171087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 2657600 - 2657772
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  2657600 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 2657699  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||   ||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  2657700 aaacataggtatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 2657772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 16968821 - 16968981
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  16968821 ttctcatctccataggaactttattcccacccttttccttgggaaattttttctattcccagaaacattttatacccgagaataaaatttagtaaacttg 16968920  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||||||| ||||||| |||||||||||||||||  | |||||||| |||||||||||    
T  16968921 taacaaacatagacatatagattcctatcattttattctcaggaatcaacaattataactt 16968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 1316919 - 1317089
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||   |||||||||  ||||||||||||||    
T  1316919 catcttcatgggaactttattcccacccttttccttgggaaatttt-tctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaac 1317017  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  1317018 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 1317089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 7053749 - 7053569
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttat--------acccaagaataaaatttagtaaa 96  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||    
T  7053749 catctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaaatttagtaaa 7053650  T
Q  97 cttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  7053649 cttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 7053569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 18897821 - 18897989
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||| |||| ||||||||||||    
T  18897821 catctccatgggaactttatttccacccttttccttgggaaattttttctattcccagaaacattttataccaaggaataaattttaataaacttgtaac 18897920  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacaca 171  Q
    |||||||  |||||||||| |||||| |||||| ||||||||||| |||||||||||  ||||||||||    
T  18897921 aaacataggcatatacatttctatcactttatttccgggaatcaacaattataacttgaaacaaacaca 18897989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 7344254 - 7344122
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  7344254 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaac 7344155  T
Q  105 aaacataaacatatacattcctatcattttatt 137  Q
    ||| |||  ||||||||||||||||||||||||    
T  7344154 aaatataggcatatacattcctatcattttatt 7344122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 6705940 - 6705762
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  6705940 ttctcatctccatgggaactttattcccacccttttctttgggaacatttttctattcccaggaacattttatacctaggaataaaatttagtaaacttg 6705841  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||||||| ||||||| ||| ||| ||||||||| |   ||||||| || ||||||||  ||||||||||||||||    
T  6705840 taacaaacatagacatatatatttctaccattttattccaatgaatcaacaaatataacttgaaacaaacacaccctaa 6705762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 346006 - 345870
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||| ||||||||||||||||||||||| || |||||  ||||||||||| |  ||| ||||||| || ||||||||||||||||||||||    
T  346006 ttctcatctccattggaactttattcccacccttttctttgggaaaaattttctattcctaaaaacgttttatatccgagaataaaatttagtaaacttg 345907  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||| |||| |  |||||||||||||||||    
T  345906 taacaaacatagacatgtgtattcctatcattttatt 345870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 8029203 - 8029297
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaactt 99  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  8029203 catctccatgggaactttattcccacccttttctttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaactt 8029297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 8029316 - 8029405
Alignment:
Q  88 tttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  8029316 tttagtaaacttgtaacaaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 8029405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 10849955 - 10849855
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaat-tttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||||||||||||||||||||||| ||| || ||  ||||||||||||||||||||||||| ||||| ||| |||| ||| |||||||||||    
T  10849955 catcttcatgggaactttattcccaccctttttctttgggaacatttttctattcccaggaacattttacacccaggaagaaaagttactaaacttgtaa 10849856  T
Q  104 c 104  Q
    |    
T  10849855 c 10849855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 14781769 - 14781685
Alignment:
Q  27 ccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||| || |||||   |||||||||||| || ||||||||||| | ||||||||||||||||||||||||||||||||    
T  14781769 ccacccttttcttttggaaaaaatttctattcccatgagcattttatacctaggaataaaatttagtaaacttgtaacaaacata 14781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 21008153 - 21008039
Alignment:
Q  47 ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaat 146  Q
    ||||||||||||||| |||||||| ||   |  |||||||||||||||||| ||||||||| | |  |||||| |||  |||||||||||| || | |||    
T  21008153 ttttttctattcccaagaacatttcatgttcgggaataaaatttagtaaacctgtaacaaatagaggcatatatatttttatcattttattcccagaaat 21008054  T
Q  147 caaaaattataactt 161  Q
    ||| || ||||||||    
T  21008053 caacaaatataactt 21008039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 111
Target Start/End: Original strand, 8314888 - 8314919
Alignment:
Q  80 gaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||||||||||||||||||    
T  8314888 gaataaaatttagtaaacttgtaacaaacata 8314919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 9760497 - 9760439
Alignment:
Q  49 ttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaa 107  Q
    |||||||||| || |||||||||||| ||   ||||||||||||||||||| |||||||    
T  9760497 ttttctattctcatgaacattttatatcctgaaataaaatttagtaaacttataacaaa 9760439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 6171691 - 6171872
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6171691 catctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 6171790  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaattcttt 184  Q
    |||||||  ||||||||||||||||||||||||  |||||||||| |||||||||||  |||||||||||||| ||||||||    
T  6171791 aaacataggcatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaacacacccttaattcttt 6171872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 346516 - 346344
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  346516 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaac 346417  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  346416 aaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 346344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 11071505 - 11071677
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  11071505 catcttcatgggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 11071604  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||||||||||||||| |||| |||||| |||||||||||  ||||||||||||||    
T  11071605 aaacataggcatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 11071677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 37533852 - 37534024
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  37533852 catctccatgggaactttattcccacccttttttttgggaaattttttctattccaaggaacattttatacccaggaataaaatttagtaaacttgtaac 37533951  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||  ||||||||||||||    
T  37533952 aaacatagacatatacattcctatcattttattcccggaaatcaacaattataacttgaaacaaacacaccct 37534024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 2050766 - 2050935
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  2050766 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 2050865  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||||||   |||||||||||||||||||||||  |||||||||| |||||||||||  |||||||||||    
T  2050866 aaacataggtatatacattcctatcattttattctcgggaatcaacaattataacttgaaacaaacacac 2050935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 2521575 - 2521747
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2521575 catctccataggaattttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccaggaataaaatttagtaaacttgtaac 2521674  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||| |||||||||||  |||||||||| |||||||||||  ||||||||||||||    
T  2521675 aaacataggcatatacattccaatcattttattttcgggaatcaacaattataacttgaaacaaacacaccct 2521747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 5770281 - 5770109
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  5770281 catcttcatgggaactttattcccaccatttttcttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 5770182  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||||||||||||||| || |||||||| |||||||||||  |||||||| |||||    
T  5770181 aaacataggcatatacattcctatcattttattcccaggaatcaacaattataacttgaaacaaacataccct 5770109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 42674826 - 42674658
Alignment:
Q  11 catgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  42674826 catgggaactttattcccaccctttttcttgggaaattttttctattcccaggaacattttatgcccgggaataaaatttagtaaacttgtaacaaacat 42674727  T
Q  111 aaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |  |||||||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  42674726 aggcatatacattccaatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 42674658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 9734017 - 9733846
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  9734017 catctccatgggaactttattcccacccttttccttgggaaattttttttattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 9733918  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||  |||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||||    
T  9733917 aaacataggcatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 9733846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 21737579 - 21737396
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttat--------acccaagaataaaatttagtaaa 96  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||    
T  21737579 catctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatacccaggaataaaatttagtaaa 21737480  T
Q  97 cttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaa 178  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  21737479 cttgtaacaaacatagacatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaaa 21737396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 34356863 - 34356697
Alignment:
Q  13 tgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataa 112  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||     
T  34356863 tgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttataccaaacatag 34356764  T
Q  113 acatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  34356763 acatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccctaa 34356697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 41729305 - 41729128
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    ||||||||||||||||||||    
T  41729305 ttctcatctccatggaaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatatctggcaataaaatttagtaaacttg 41729206  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||||||  ||||| |||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||||    
T  41729205 taacaaacataggcatatccattcctatcattttattcccgggaataaaaaattataacttgaaacaaacacacccta 41729128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 37192423 - 37192591
Alignment:
Q  6 atcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaaca 105  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||    
T  37192423 atctccatggaaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttaataaacttgtaaca 37192522  T
Q  106 aacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacac 172  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||||    
T  37192523 aacatagacatatacatttctatcattttattcccgggaatcaacaattataacttgaaacaaacacac 37192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 4559459 - 4559633
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  4559459 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttatacccgggaataaaataaagtaaacttgtaac 4559558  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||  |||||||||||| |||||||||||   ||||||||| |||||||||||  ||||||||||||||||    
T  4559559 aaacataggcatatacattccaatcattttattcttgggaatcaacaattataacttgaaacaaacacaccctaa 4559633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 40951034 - 40950856
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||||||||||||||||||||||||||||| | || |||||| ||||||||||||||||||||||| | ||||||| |||||||||||||    
T  40951034 ttctcatctccatgggaactttattcccacccttttccttggaaatttttttgtattcccaggaacattttataccaaggaataaattttagtaaacttg 40950935  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    |||||||||||| |||||| ||| ||||||||||||| ||| ||||||| |||||||||||  ||||||||||||||||    
T  40950934 taacaaacataagcatatatatttctatcattttattcccgagaatcaacaattataacttgaaacaaacacaccctaa 40950856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 41750429 - 41750599
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  41750429 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaac 41750528  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacc 173  Q
    |||||||  |||||||||| ||||||||||||| |  |||||||| |||||||||||  ||||||||||||    
T  41750529 aaacataggcatatacatttctatcattttattcctaggaatcaacaattataacttgaaacaaacacacc 41750599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 14777669 - 14777497
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  14777669 catctccataggaattttattcccaccattttccttgggaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 14777570  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||  |||||||||||| ||||||||||| ||||||||||| |||||||| ||  ||||||||||||||    
T  14777569 aaacataggcatatacattccaatcattttattcccgggaatcaacaattataaattgaaacaaacacaccct 14777497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 12 - 177
Target Start/End: Original strand, 17965890 - 17966057
Alignment:
Q  12 atgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacata 111  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  17965890 atgggaactttattcccaccctttttcatgggaaattttttctattcctaggaacattttatacccgggaataaaatttggtaaacttgtaacaaacata 17965989  T
Q  112 aacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
     ||||||||||||| |||||||||||  |||||||||| |||||||||||  ||||||||||||||||    
T  17965990 gacatatacattccaatcattttattatcgggaatcaacaattataacttgaaacaaacacaccctaa 17966057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 39995314 - 39995130
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttat--------acccaagaataaaatttag 92  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||        | ||| |||||||||||||    
T  39995314 ttctcatctccatgggaactttattcccaccattttccttgggaaattttttctattcccaggaacattttatcattttatatccaggaataaaatttag 39995215  T
Q  93 taaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  39995214 taaacttgtaacaaacataggcatatacattcctatcattttattcccgggaatcaacaattataacttgaaacaaacacaccct 39995130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 638490 - 638649
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||   ||||||||||||||||| ||    
T  638490 ttctcatctccatgagaactttattccc-cccttttccttgggaaattttttatattcctaggaacattttatacccggaaataaaatttagtaaacctg 638588  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  638589 taacaaacatagacatatacattcctatcattttatttccggaaatcaacaattataactt 638649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 28311868 - 28311712
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| || ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  28311868 catctccacgggaactttattcccacccttttccttgggaaagattttctattcccaggaacattttatacccgggaataaaattcagtaaacttgtaac 28311769  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||  |||||| ||||||||||||||||| ||||||||||| || ||||||||    
T  28311768 aaacataggcatatatattcctatcattttattcccgggaatcaacaaatataactt 28311712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 37233329 - 37233485
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  37233329 catctccatgggaactttattcccacccttttccttgggaacgattttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaac 37233428  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||  ||||||  |||||||||||||||| ||||||||||| || ||||||||    
T  37233429 aaacataggcatatatgttcctatcattttattcccgggaatcaacaaatataactt 37233485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 161
Target Start/End: Original strand, 26310167 - 26310325
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||| ||||    
T  26310167 catctccatgggaactttattcccacccttttctttgggaaattttttctattcccaggaacattttataccaaggaataaattttaataaacttctaac 26310266  T
Q  105 aaac--ataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||  ||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  26310267 aaacatatagacatatacatttctatcattttattcccgggaatcaacaattataactt 26310325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 20426658 - 20426481
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||| |||||||||||| ||||||||||||| |||||  |||||||||||||||||||||||||| ||  | |||||||||||||||||||    
T  20426658 ttctcatctccataggaactttattctcacccttttccttgggaaaaattttctattcccaggaacattttatatccggggataaaatttagtaaacttg 20426559  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacacccta 176  Q
    |||||||||||  |||||| ||||||||||||||||| ||||||||||| || ||||| ||  |||||||||||||||    
T  20426558 taacaaacataggcatataaattcctatcattttattcccgggaatcaacaaatataatttgaaacaaacacacccta 20426481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 27358138 - 27357957
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||  ||||||||||||||||||||||||||||| || || |||||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  27358138 ttctcatctctatgggaactttattcccacccttttccttgggtaaatttttctattcccatgaatattttatacctgggaataaaatttagtaaacttg 27358039  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaatt 180  Q
    ||||||||||| |||||||||| |||||||||||||  | ||||||||| || ||||||||  |||||||||||||| ||||    
T  27358038 taacaaacatagacatatacatccctatcattttatacctgggaatcaacaaatataacttgaaacaaacacacccttaatt 27357957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 180
Target Start/End: Original strand, 45409150 - 45409327
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| |||||||||||||||||||||||||||||| || || |||||||||||||| ||| |||||||||||   |||||||||||||||||||||||     
T  45409150 catctccatgggaactttattcccacccttttccttgggtaaatttttctattcccatgaatattttatacccggtaataaaatttagtaaacttgtaaa 45409249  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaatt 180  Q
    |||||||  |||||||||||||||||||||||    ||||||||| || ||||||||  |||||||||||||| ||||    
T  45409250 aaacataggcatatacattcctatcattttatacttgggaatcaacaaatataacttgaaacaaacacacccttaatt 45409327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 175
Target Start/End: Original strand, 6571602 - 6571759
Alignment:
Q  20 tttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatata 119  Q
    |||||||| |||||||| ||| ||||||||||| ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||    
T  6571602 tttattcctaccctttttcttgggaaattttttatattccccggaacattttatacctgagaataaaatttagtaaacttgtaacaaacataggcatata 6571701  T
Q  120 cattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
     ||||||||||||||||| |||| |||||| || ||||||||  |||||| |||||||    
T  6571702 tattcctatcattttatttccggaaatcaacaaatataactttaaacaaatacaccct 6571759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 18713828 - 18713660
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||||||  |||||||||||||||||||||||||    
T  18713828 catctccatgggaactttattcccacccttttctttgggaaattttttttattaccaagaacattttatacccgggaataaaatttagtaaacttgtaac 18713729  T
Q  105 aaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacaca 171  Q
    |||||||  |||||| |||  |||||||||||| ||  ||||||| || ||||||||  ||||||||||    
T  18713728 aaacataggcatatatatttatatcattttattaccatgaatcaacaaatataacttgaaacaaacaca 18713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 45694087 - 45694220
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||    
T  45694087 tcatctccatgggaactttattcccacccttttccttgggaaaaattttctattcccatgaacgttttatacccgggaataaaatttagtaaacttgtaa 45694186  T
Q  104 caaacataaacatatacattcctatcattttatt 137  Q
    |||||||| |||| |  |||||||||||||||||    
T  45694187 caaacatagacatgtgtattcctatcattttatt 45694220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 11763546 - 11763414
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||  || |||||||||||||||||| ||     
T  11763546 ttctcatcttcatggaaactttattcccacctttttcctttggaaattttttctattcccagaaatattttatgtccgagaataaaatttagtaaattta 11763447  T
Q  101 taacaaacataaacatatacattcctatcattt 133  Q
    ||||||||||| ||||||| |||||||||||||    
T  11763446 taacaaacatagacatatatattcctatcattt 11763414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14253418 - 14253578
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||||||||  || ||||||| |||||||||| ||  |||||||||||||||||||  |||||||||||| |  |||||||||||||||||||||    
T  14253418 ttctcatcttcatgaaaattttattcacacccttttctttgagaaattttttctattcccataaacattttatactcgggaataaaatttagtaaacttg 14253517  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    ||||||||||| ||||||| ||| ||||||||||||| ||| ||||||| || ||||||||    
T  14253518 taacaaacatagacatatatatttctatcattttattcccgagaatcaacaaatataactt 14253578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23944059 - 23944165
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  23944059 ttctcatctccatgggaactttattcccacccttttcgttgagaaattttttctattcccaggaacattttatatccgagaataaaatttagtaaacttg 23944158  T
Q  101 taacaaa 107  Q
    |||||||    
T  23944159 taacaaa 23944165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 1988207 - 1988382
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| ||||| ||||||||||||||||||||||||  |||| |||||||||||||| |||||||||||| ||   ||||||||||| ||||||||    
T  1988207 ttctcatctccatggaaactttattcccacccttttccttgagaaaatttttctattcccaagaacattttatatccggaaataaaatttaataaacttg 1988306  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccc 174  Q
    |||||||||||  ||| || ||| ||||||||||||| || | |||||| || ||||||||  |||||||||||||    
T  1988307 taacaaacataggcatgtatatttctatcattttattcccagaaatcaacaaatataacttcaaacaaacacaccc 1988382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14832706 - 14832866
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||  ||| |||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||   ||||||||||||||||||||     
T  14832706 ttctcatctcaatgagaactttattcccacccttttctttgggaaaatttttctattcccaagaacattttatacctgggaataaaatttagtaaacttt 14832805  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||||||  |||||| ||| ||||||||||||| |  |||||||| || ||||||||    
T  14832806 taacaaacataggcatatatatttctatcattttattcctaggaatcaacaaatataactt 14832866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 3902352 - 3902488
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||||| || |||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  3902352 ttctcatctccaagggaactttattcccaccattttctttgggaatttttttctattcccaggaacattttaaacctgagaataaaatttagtaaacttg 3902451  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||    |||| ||| |||||||||||||    
T  3902452 taacaaacatatgtctatatatttctatcattttatt 3902488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 25724921 - 25725032
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaa-tttagtaaactt 99  Q
    |||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||  ||||||| |||| ||||| |    
T  25724921 ttctcatcttcatgagaactttattcccacccttttctttgggaaactttttctattcccagaaacattttatacccagcaataaaattttaataaacct 25725020  T
Q  100 gtaacaaacata 111  Q
    | ||||||||||    
T  25725021 gcaacaaacata 25725032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 40569934 - 40570092
Alignment:
Q  19 ctttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatat 118  Q
    ||||||||||||| ||||| || |||||  |||||||||||||||||||||||||||||  ||||||||||||  ||||||||||||||||||  ||| |    
T  40569934 ctttattcccaccattttctttgggaaaaattttctattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacataggcatgt 40570033  T
Q  119 acattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    |  ||  ||| |||||||| || |||||| | |||||||||||  ||||||||||||||    
T  40570034 atgtttttatgattttattcccaggaatctacaattataacttgaaacaaacacaccct 40570092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 25454918 - 25455096
Alignment:
Q  1 ttctcatcttcatgggaacttt--attcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaact 98  Q
    ||||| ||||||||||||||||  |||||| || ||||  ||  ||||  ||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  25454918 ttctcgtcttcatgggaactttttattccctccattttttttgagaaaacttttctattcccaggaacattttatactcgagaatgaaatttagtaaact 25455017  T
Q  99 tgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccct 175  Q
    ||||||||||||| ||||||  |||  ||| ||||||||  | |||||| | || ||||||||  ||||||||||||||    
T  25455018 tgtaacaaacatagacatatgtatttttatgattttattctcaggaatctacaaatataacttgaaacaaacacaccct 25455096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 4875672 - 4875807
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||||||||||||||||||||| |||| || |||  |||||| ||||| |  |||| |||||||   || |||||||||||| |||||||    
T  4875672 ttctcatcttcatgggaactttattcccacccgtttctttgggattttttttttattctcgagaacgttttatattgaa-aataaaatttagcaaacttg 4875770  T
Q  101 taacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||||| ||  ||| |||||||||||||    
T  4875771 taacaaacataaacaaatttatttctatcattttatt 4875807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 13760867 - 13760938
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacc 76  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  13760867 catctccatgggaactttattcccacccttttccttgggaaattttttctattcccataaacattttatacc 13760938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 39819590 - 39819702
Alignment:
Q  2 tctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaac---attttatacccaagaataaaatttagtaaact 98  Q
    ||||||||||||| |||||||||||||||| ||||| || | || ||||||| ||||||||||||   ||| |||||||  |||| ||||||||||||||    
T  39819590 tctcatcttcatgagaactttattcccaccattttctttggaaatttttttcaattcccaggaacattattatatacccgggaatgaaatttagtaaact 39819689  T
Q  99 tgtaacaaacata 111  Q
    |||||||||||||    
T  39819690 tgtaacaaacata 39819702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 8868832 - 8868702
Alignment:
Q  5 catcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaac 104  Q
    ||||||||||||||||||||||||||||||||| || ||||| | || ||| ||||||||||||||| |||| | |||||||||||| ||| | ||||||    
T  8868832 catcttcatgggaactttattcccacccttttctttgggaaa-tattccta-tcccaggaacattttctacctaggaataaaatttactaatcctgtaac 8868735  T
Q  105 aaacataaacatatacattcctatcattttatt 137  Q
    ||||||||  ||||  ||| |||||| ||||||    
T  8868734 aaacataagaatatgtatttctatcaatttatt 8868702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41298093 - 41297981
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||||| ||||||||||| |||||||| | || ||||||||||| |||| | |  ||||||||||| ||  |||||||||||| ||||||||    
T  41298093 ttctcatcttcatgagaactttattcacaccctttgctttgggaaattttttttatttctaaaaacattttatatccgggaataaaatttaataaacttg 41297994  T
Q  101 taacaaacataaa 113  Q
    ||||| |||||||    
T  41297993 taacatacataaa 41297981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3254239 - 3254142
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaatt-ttttctattcccaggaacattttatacccaagaataaaatttagtaaac 97  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||   |||||||||||||| |||||||| ||| | |||||||||||||||||||    
T  3254239 ttctcatcttcatgggaactttattcccaccatttcctttgggaaaaaattttctattcccagaaacattttgtacgcgagaataaaatttagtaaac 3254142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37851753 - 37851890
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaa---attttttctattcccaggaacattttatacccaagaataaaatttagtaaac 97  Q
    |||||||||||||||||||||||||| |||| |||| ||| ||||    ||||||||||||| || |||||||||||||| | ||||||| |||||||||    
T  37851753 ttctcatcttcatgggaactttattctcaccatttt-ctttggaattttttttttctattcctagaaacattttatacccgaaaataaaa-ttagtaaac 37851850  T
Q  98 ttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    || || |||||||||  |  || ||| |||||||||||||    
T  37851851 ttctagcaaacataagaaggtatatttctatcattttatt 37851890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 5003006 - 5002876
Alignment:
Q  6 atcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaaca 105  Q
    |||||||||| ||||||||||||||| | ||| || | |  |||||||||||||||| ||||||||||||    ||||||||||||| ||||||||||||    
T  5003006 atcttcatggaaactttattcccaccatattctttggaattttttttctattcccagaaacattttatacttg-gaataaaatttagcaaacttgtaaca 5002908  T
Q  106 aacataaacatatacattcctatcattttatt 137  Q
    || |||  ||| || | | |||||||||||||    
T  5002907 aatatatgcatgtatacttctatcattttatt 5002876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 13539572 - 13539679
Alignment:
Q  9 ttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaac 108  Q
    ||||||||||||||||||||||   ||||  |  ||||||||||| |||||||  |||||||||||||   |||||||||||| |||| |||||||||||    
T  13539572 ttcatgggaactttattcccactagtttctgtgagaaattttttccattcccataaacattttatacctgcgaataaaatttaataaatttgtaacaaac 13539671  T
Q  109 ataaacat 116  Q
    ||| ||||    
T  13539672 atagacat 13539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 4685077 - 4685211
Alignment:
Q  5 catcttcatgggaactttattcccacccttttcctt-aggaaattttttctattcccaggaa-cattttatacccaagaataaaatttagtaaacttgta 102  Q
    |||||||||||||||||||||| |||||||||| || |     ||||||||||| ||||||| | |||||||| |   ||||||||||| |||| || ||    
T  4685077 catcttcatgggaactttattcacacccttttctttgatttttttttttctattgccaggaaacgttttatactctgaaataaaatttaataaatttata 4685176  T
Q  103 acaaacataaacatatacattcctatcattttatt 137  Q
    |||||||||||||| || ||| |||||||||||||    
T  4685177 acaaacataaacatgtatatttctatcattttatt 4685211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 25625328 - 25625418
Alignment:
Q  47 ttttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttatt 137  Q
    ||||||||||||||| ||||||||||||||  |||||||||| ||||||| ||| ||||||| || ||||  | ||| |||||||||||||    
T  25625328 ttttttctattcccatgaacattttatacctcagaataaaatctagtaaatttgcaacaaacctagacattcatatttctatcattttatt 25625418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 516566 - 516463
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    |||||||||||| ||||| ||||||| |||| ||||| || |||| |||||| ||||||||  |||||||||||||||  ||||||||||| |||| ||     
T  516566 ttctcatcttcacgggaattttattctcaccattttcttt-ggaatttttttatattcccaaaaacattttatacccagaaataaaatttactaaaatta 516468  T
Q  101 taaca 105  Q
    |||||    
T  516467 taaca 516463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 14403349 - 14403232
Alignment:
Q  60 caggaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataac 159  Q
    |||||||||||||||||  ||||||||||||| ||||||||||| |||  ||  ||| || |||  |||||||||||| || |||||||| || || |||    
T  14403349 caggaacattttatacctgagaataaaatttattaaacttgtaataaatgtaggcatgtatatttttatcattttatttccaggaatcaacaaatacaac 14403250  T
Q  160 tt--aacaaacacaccct 175  Q
    ||  ||||||||||||||    
T  14403249 ttcaaacaaacacaccct 14403232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 24499400 - 24499509
Alignment:
Q  63 gaacattttatacccaagaataaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt- 161  Q
    ||||||||||||||   |||||||||||||||||||| ||||||||||  | ||||| ||| ||||||||||||| |   ||||||| || ||||||||     
T  24499400 gaacattttataccatggaataaaatttagtaaacttataacaaacat--agatatatatttctatcattttatttctatgaatcaacaaatataacttg 24499497  T
Q  162 -aacaaacacac 172  Q
     |||||||||||    
T  24499498 aaacaaacacac 24499509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 110
Target Start/End: Complemental strand, 1723336 - 1723294
Alignment:
Q  68 ttttatacccaagaataaaatttagtaaacttgtaacaaacat 110  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  1723336 ttttatatccaagaataaaatttaataaacttgtaacaaacat 1723294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1623279 - 1623412
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| ||||| | |||||||||||| || | ||| || | ||| ||| ||| | | ||||||||||||||| ||  |||| ||||||| |||||| |    
T  1623279 ttctcatattcattgaaactttattcccgccatgttctttggaaaaatttctctgtactcaggaacattttataaccgggaatcaaatttaataaactcg 1623378  T
Q  101 taacaaacataaacatatacattcctatcatttta 135  Q
    |||| |||||| ||||||| ||| |||| ||||||    
T  1623379 taac-aacatagacatatatatttctattatttta 1623412  T

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Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 180
Target Start/End: Original strand, 7007551 - 7007650
Alignment:
Q  83 taaaatttagtaaacttgtaacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaaatt 180  Q
    ||||||||||||||||||||  ||||||  ||| ||| ||| | ||||||||||  ||  ||||||| || ||||||||  || ||||||||||||||||    
T  7007551 taaaatttagtaaacttgtatgaaacattgacaaatatatttccatcattttatccccaagaatcaacaaatataacttgaaataaacacaccctaaatt 7007650  T

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Target: scaffold0189 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29127 - 28967
Alignment:
Q  1 ttctcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttg 100  Q
    ||||||| | ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29127 ttctcatttccatgggaactttattcccacccttttccttgagaaattttttctattcccaggaacattttatacccgggaataaaatttagtaaacttg 29028  T
Q  101 taacaaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt 161  Q
    |||||||||||  |||||||||||||||||||||||| |||  |||||| |||||||||||    
T  29027 taacaaacataggcatatacattcctatcattttattcccgaaaatcaacaattataactt 28967  T

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Target: scaffold0702 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 3737 - 3562
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||| ||||||||||||||||||||| ||||| ||  ||||  ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  3737 tcatctccatgggaactttattcccaccattttctttgagaaaacttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaa 3638  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||||  |||||| |||  ||| |||||||| |  | |||| | || ||||||||  ||||||||||||||||    
T  3637 caaacataggcatatatatttttataattttattcctagaaatctacaaatataacttgaaacaaacacaccctaa 3562  T

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Target: scaffold0662 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 4367 - 4542
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||| ||||||||||||||||||||| ||||| ||  ||||  ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  4367 tcatctccatgggaactttattcccaccattttctttgagaaaacttttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaa 4466  T
Q  104 caaacataaacatatacattcctatcattttattgccgggaatcaaaaattataactt--aacaaacacaccctaa 177  Q
    ||||||||  |||||| |||  ||| |||||||| |  | |||| | || ||||||||  ||||||||||||||||    
T  4467 caaacataggcatatatatttttataattttattcctagaaatctacaaatataacttgaaacaaacacaccctaa 4542  T

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Target: scaffold0238 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 23468 - 23335
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||| ||||||||||||||| ||||| || | |||   ||| |||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  23468 tcatcttcatggaaactttattcccaccgttttctttggaaaaaaatttatattcccaggaatattttatactcgtgaataaaatttagtaaacttgtaa 23369  T
Q  104 caaacataaacatatacattcctatcattttatt 137  Q
    |||||||| |||| || ||| |||| ||||||||    
T  23368 caaacatagacatgtatatttctataattttatt 23335  T

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Target: scaffold1480 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1480
Description:

Target: scaffold1480; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 557 - 450
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||||||||||||||||||  ||||| || ||||  || ||  ||||||||||||||||||||   | |||||||||||| |||||||| ||    
T  557 tcatcttcatgggaactttattcccacaattttctttgggaatgttatttcattcccaggaacattttatatttaggaataaaatttaataaacttgcaa 458  T
Q  104 caaacata 111  Q
    ||||||||    
T  457 caaacata 450  T

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Target: scaffold0069 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 21962 - 21855
Alignment:
Q  4 tcatcttcatgggaactttattcccacccttttccttaggaaattttttctattcccaggaacattttatacccaagaataaaatttagtaaacttgtaa 103  Q
    |||||||||||||||||||||||||||  ||||  || ||||  || ||  || ||||||||||||||||| | | |||||||||||| |||||||| ||    
T  21962 tcatcttcatgggaactttattcccacaattttttttgggaatgttatttcatacccaggaacattttatatctaggaataaaatttaataaacttgcaa 21863  T
Q  104 caaacata 111  Q
    ||||||||    
T  21862 caaacata 21855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 305825 - 305874
Alignment:
Q  67 attttatacccaagaataaaatttagtaaacttgtaacaaacataaacat 116  Q
    |||||||||| || ||| ||||||| |||| |||||||||||||||||||    
T  305825 attttataccaaataattaaatttaataaatttgtaacaaacataaacat 305874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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