View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9955_high_7 (Length: 244)
Name: NF9955_high_7
Description: NF9955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9955_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 8631307 - 8631526
Alignment:
| Q |
1 |
gggatttaccggaaccggtgggggactccagtaacgcgtgagagtgaccttctttctgagctcgattaagggttgagataactcgacccataaacgcgaa |
100 |
Q |
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| T |
8631307 |
gggatttaccggaaccggtgggggactccagtaacgcgtgagagtgaccttcattctgagctcgattaagggttgagataactcgacccataaacgcgaa |
8631406 |
T |
|
| Q |
101 |
ttgagaaccgtagggttggtatggaaattcgacgggaagacctccgatgtggtatacatttttagggttaggttttttctcggcggaggaagaggaatac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8631407 |
ttgagaaccgtagggttggtatggaaattcgacgggaagacctccgatgtggtatacatttttagggttaggttttttctcggcggaggaagaggaatac |
8631506 |
T |
|
| Q |
201 |
atttttaatttcacagtttt |
220 |
Q |
| |
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|||||||||||||||||||| |
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| T |
8631507 |
atttttaatttcacagtttt |
8631526 |
T |
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