View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9957_high_3 (Length: 260)
Name: NF9957_high_3
Description: NF9957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9957_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 96 - 255
Target Start/End: Original strand, 3245948 - 3246107
Alignment:
| Q |
96 |
caacaacaacaatacagaagagagaagaagaaggattcaagaaagaggttcagatcgaatggcattaataactggtcgtatcaatgcacttcctcctaca |
195 |
Q |
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| T |
3245948 |
caacaacaacaatacagaagagagaagaagaaggattcaagaaagaggttcagatcgaatggcattaataactggtcgtatcaatgcacttcctcctaca |
3246047 |
T |
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| Q |
196 |
cctcgttctgctacctcatctccagtacatcctcgtcatacacaatctatctctgcttct |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
3246048 |
cctcgttctgctacctcatctccagtacatcctcgtcatacacaatctatgtctgtttct |
3246107 |
T |
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