View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9959_high_15 (Length: 345)

Name: NF9959_high_15
Description: NF9959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9959_high_15
NF9959_high_15
[»] chr3 (39 HSPs)
chr3 (3-328)||(12372119-12372445)
chr3 (3-111)||(34276442-34276550)
chr3 (3-104)||(22246981-22247081)
chr3 (31-111)||(12517302-12517382)
chr3 (3-111)||(18457116-18457224)
chr3 (30-111)||(19912591-19912672)
chr3 (3-111)||(8145232-8145340)
chr3 (3-104)||(8115306-8115407)
chr3 (3-104)||(18535754-18535855)
chr3 (3-104)||(22470414-22470515)
chr3 (32-109)||(819853-819930)
chr3 (3-100)||(8765658-8765755)
chr3 (30-109)||(12771209-12771288)
chr3 (30-100)||(8770575-8770645)
chr3 (47-109)||(52935540-52935602)
chr3 (15-99)||(3114726-3114810)
chr3 (27-111)||(7805750-7805834)
chr3 (3-111)||(16242199-16242306)
chr3 (15-111)||(25850953-25851049)
chr3 (3-110)||(20891651-20891758)
chr3 (14-111)||(1096766-1096862)
chr3 (3-104)||(14977790-14977891)
chr3 (3-111)||(13938851-13938959)
chr3 (3-111)||(16228349-16228457)
chr3 (38-106)||(19387869-19387937)
chr3 (3-94)||(13906605-13906696)
chr3 (38-104)||(2508731-2508797)
chr3 (1-114)||(22450430-22450544)
chr3 (34-86)||(17135107-17135159)
chr3 (55-111)||(20886904-20886960)
chr3 (3-111)||(31283908-31284016)
chr3 (47-90)||(5521551-5521594)
chr3 (27-94)||(19170163-19170230)
chr3 (34-100)||(2166051-2166116)
chr3 (31-101)||(6075984-6076054)
chr3 (7-104)||(3429236-3429333)
chr3 (55-103)||(27852616-27852664)
chr3 (68-107)||(25530740-25530779)
chr3 (15-65)||(20431468-20431518)
[»] chr6 (45 HSPs)
chr6 (3-111)||(14641616-14641724)
chr6 (3-109)||(22564556-22564662)
chr6 (10-104)||(22845863-22845957)
chr6 (3-104)||(1636618-1636718)
chr6 (3-111)||(23644322-23644430)
chr6 (3-111)||(24469782-24469890)
chr6 (3-104)||(17822035-17822137)
chr6 (3-91)||(19577562-19577650)
chr6 (11-104)||(9519724-9519817)
chr6 (31-104)||(14723696-14723769)
chr6 (32-104)||(9841032-9841104)
chr6 (30-109)||(24480035-24480114)
chr6 (34-104)||(17384038-17384108)
chr6 (14-99)||(9848158-9848243)
chr6 (3-104)||(21687141-21687242)
chr6 (3-104)||(22404266-22404367)
chr6 (15-111)||(14076392-14076488)
chr6 (3-111)||(19246260-19246368)
chr6 (14-92)||(19593999-19594078)
chr6 (3-116)||(2588280-2588393)
chr6 (3-111)||(14078021-14078130)
chr6 (3-103)||(17847764-17847864)
chr6 (5-89)||(21060431-21060515)
chr6 (32-111)||(8038055-8038134)
chr6 (3-82)||(9507304-9507383)
chr6 (34-104)||(4340679-4340749)
chr6 (3-104)||(21932458-21932560)
chr6 (5-94)||(8246599-8246687)
chr6 (31-111)||(21760412-21760492)
chr6 (56-116)||(26820897-26820957)
chr6 (55-114)||(9338980-9339039)
chr6 (56-111)||(14727171-14727226)
chr6 (57-104)||(27961252-27961299)
chr6 (8-94)||(19721868-19721953)
chr6 (4-89)||(21079748-21079833)
chr6 (57-90)||(32760007-32760040)
chr6 (31-103)||(11136930-11137002)
chr6 (29-104)||(13216316-13216392)
chr6 (56-104)||(21036967-21037015)
chr6 (30-90)||(21152517-21152577)
chr6 (27-104)||(9897880-9897956)
chr6 (30-71)||(17379495-17379536)
chr6 (74-114)||(9387603-9387643)
chr6 (10-109)||(21845735-21845835)
chr6 (55-111)||(30356299-30356355)
[»] chr8 (53 HSPs)
chr8 (3-103)||(13313284-13313384)
chr8 (3-111)||(20400318-20400426)
chr8 (1-111)||(14271823-14271933)
chr8 (3-109)||(15176439-15176545)
chr8 (5-114)||(24380355-24380464)
chr8 (3-116)||(24583171-24583284)
chr8 (3-111)||(23867834-23867942)
chr8 (15-109)||(17510900-17510994)
chr8 (9-102)||(24090892-24090985)
chr8 (10-111)||(24389747-24389848)
chr8 (10-99)||(24520019-24520108)
chr8 (3-111)||(19265806-19265914)
chr8 (20-104)||(19704987-19705071)
chr8 (12-111)||(29765396-29765496)
chr8 (47-111)||(30117663-30117727)
chr8 (2-111)||(29380965-29381075)
chr8 (30-109)||(18446866-18446945)
chr8 (13-104)||(22501827-22501918)
chr8 (3-109)||(17835527-17835633)
chr8 (9-111)||(28621594-28621696)
chr8 (3-104)||(14077106-14077206)
chr8 (27-104)||(18007544-18007620)
chr8 (27-111)||(4007156-4007240)
chr8 (3-104)||(6886652-6886755)
chr8 (26-102)||(34499235-34499311)
chr8 (57-104)||(21695425-21695472)
chr8 (3-101)||(26888470-26888568)
chr8 (3-104)||(19791377-19791478)
chr8 (20-111)||(24381330-24381422)
chr8 (6-101)||(15058519-15058614)
chr8 (9-111)||(21316773-21316875)
chr8 (27-101)||(24908912-24908986)
chr8 (27-101)||(24911133-24911207)
chr8 (3-104)||(28903979-28904080)
chr8 (63-104)||(13833615-13833656)
chr8 (56-109)||(24381993-24382046)
chr8 (3-104)||(26829478-26829579)
chr8 (3-111)||(5856763-5856870)
chr8 (35-111)||(17100211-17100287)
chr8 (57-104)||(5151957-5152004)
chr8 (34-101)||(7985132-7985199)
chr8 (57-104)||(15557405-15557452)
chr8 (56-111)||(24105521-24105576)
chr8 (61-111)||(25227301-25227351)
chr8 (50-104)||(28858867-28858920)
chr8 (3-104)||(12342903-12343002)
chr8 (3-104)||(37527038-37527139)
chr8 (55-111)||(6286318-6286374)
chr8 (64-104)||(17650006-17650046)
chr8 (3-47)||(24388441-24388485)
chr8 (9-104)||(25180733-25180828)
chr8 (15-111)||(25481510-25481606)
chr8 (7-71)||(28275359-28275423)
[»] chr7 (48 HSPs)
chr7 (3-104)||(5236878-5236979)
chr7 (3-104)||(10332388-10332489)
chr7 (27-111)||(26249080-26249164)
chr7 (15-104)||(8977482-8977571)
chr7 (5-111)||(9767771-9767877)
chr7 (30-104)||(18986756-18986830)
chr7 (30-104)||(19001384-19001458)
chr7 (3-104)||(4450655-4450756)
chr7 (15-104)||(11804694-11804783)
chr7 (3-104)||(23173697-23173798)
chr7 (3-111)||(14195732-14195840)
chr7 (31-104)||(8052441-8052513)
chr7 (3-92)||(10418541-10418630)
chr7 (3-82)||(21502838-21502917)
chr7 (34-104)||(3585534-3585604)
chr7 (3-104)||(3173694-3173795)
chr7 (3-104)||(13280743-13280844)
chr7 (30-104)||(9078893-9078968)
chr7 (10-104)||(144967-145060)
chr7 (34-104)||(2565921-2565991)
chr7 (3-109)||(3736320-3736426)
chr7 (30-92)||(39270296-39270358)
chr7 (3-104)||(6018342-6018443)
chr7 (3-104)||(6046511-6046612)
chr7 (3-104)||(10611697-10611798)
chr7 (7-104)||(18468351-18468448)
chr7 (3-104)||(23897224-23897325)
chr7 (31-111)||(2927886-2927966)
chr7 (20-111)||(19201459-19201550)
chr7 (3-109)||(23127901-23128007)
chr7 (47-116)||(3692760-3692829)
chr7 (3-104)||(6039309-6039410)
chr7 (15-104)||(7399324-7399412)
chr7 (3-104)||(9288894-9288995)
chr7 (3-104)||(9298686-9298787)
chr7 (34-111)||(19154833-19154910)
chr7 (34-111)||(20754232-20754309)
chr7 (3-117)||(21707336-21707451)
chr7 (3-100)||(1586175-1586272)
chr7 (55-104)||(1810940-1810989)
chr7 (55-104)||(9722477-9722526)
chr7 (57-104)||(1254708-1254754)
chr7 (3-90)||(21234087-21234174)
chr7 (46-104)||(19201334-19201392)
chr7 (57-94)||(20176131-20176168)
chr7 (56-111)||(1589276-1589332)
chr7 (68-104)||(2505892-2505928)
chr7 (74-110)||(13252713-13252749)
[»] chr1 (48 HSPs)
chr1 (9-111)||(21663095-21663197)
chr1 (3-104)||(15542320-15542421)
chr1 (35-107)||(27973319-27973391)
chr1 (30-109)||(729147-729226)
chr1 (15-111)||(22621790-22621885)
chr1 (31-109)||(12210277-12210355)
chr1 (26-111)||(26647362-26647447)
chr1 (3-111)||(18734590-18734698)
chr1 (3-104)||(16363607-16363708)
chr1 (3-104)||(28009730-28009831)
chr1 (3-101)||(15158803-15158902)
chr1 (33-111)||(14782544-14782622)
chr1 (10-104)||(18527508-18527602)
chr1 (3-104)||(14235296-14235397)
chr1 (3-104)||(15571700-15571801)
chr1 (10-111)||(21450758-21450859)
chr1 (3-104)||(24901193-24901294)
chr1 (3-111)||(16114784-16114892)
chr1 (3-111)||(22426520-22426628)
chr1 (3-94)||(16180702-16180792)
chr1 (20-104)||(22507393-22507478)
chr1 (3-104)||(27116235-27116336)
chr1 (48-104)||(33192381-33192437)
chr1 (3-111)||(35133868-35133976)
chr1 (15-90)||(12011210-12011285)
chr1 (30-111)||(18832226-18832307)
chr1 (30-111)||(25402440-25402521)
chr1 (3-111)||(18098253-18098361)
chr1 (3-111)||(22626159-22626267)
chr1 (3-71)||(26022379-26022447)
chr1 (35-111)||(26611336-26611412)
chr1 (3-94)||(17445050-17445141)
chr1 (27-105)||(21848634-21848712)
chr1 (3-104)||(16785613-16785713)
chr1 (3-104)||(18827380-18827481)
chr1 (66-114)||(7221563-7221611)
chr1 (3-71)||(9403618-9403686)
chr1 (56-104)||(11845233-11845281)
chr1 (68-111)||(15630938-15630981)
chr1 (9-104)||(22624606-22624701)
chr1 (69-104)||(24464664-24464699)
chr1 (3-114)||(17543115-17543228)
chr1 (15-104)||(9782991-9783080)
chr1 (55-104)||(25959471-25959520)
chr1 (74-111)||(26022440-26022477)
chr1 (3-51)||(16915261-16915309)
chr1 (27-71)||(22624911-22624955)
chr1 (68-104)||(27912113-27912149)
[»] chr4 (35 HSPs)
chr4 (3-104)||(12616698-12616799)
chr4 (3-104)||(17335367-17335468)
chr4 (15-103)||(7583788-7583876)
chr4 (3-111)||(15166452-15166560)
chr4 (3-111)||(25025090-25025198)
chr4 (1-94)||(17711288-17711381)
chr4 (3-104)||(18750808-18750909)
chr4 (3-103)||(9536768-9536868)
chr4 (9-104)||(10106285-10106380)
chr4 (3-109)||(9263357-9263463)
chr4 (3-104)||(19883524-19883625)
chr4 (15-111)||(9849712-9849808)
chr4 (3-103)||(20828152-20828252)
chr4 (3-109)||(17218513-17218618)
chr4 (3-111)||(17434418-17434526)
chr4 (3-111)||(19556546-19556652)
chr4 (31-111)||(22171760-22171840)
chr4 (45-104)||(8968083-8968142)
chr4 (27-104)||(9054013-9054090)
chr4 (3-104)||(11512038-11512139)
chr4 (27-104)||(12836082-12836159)
chr4 (27-104)||(14573457-14573533)
chr4 (31-88)||(16928936-16928993)
chr4 (3-104)||(22350252-22350353)
chr4 (30-109)||(11782503-11782582)
chr4 (50-106)||(16669731-16669787)
chr4 (3-82)||(10236573-10236652)
chr4 (55-104)||(13588744-13588793)
chr4 (56-101)||(15047804-15047849)
chr4 (56-101)||(15106575-15106620)
chr4 (15-72)||(17108714-17108771)
chr4 (27-72)||(19603901-19603946)
chr4 (3-111)||(11252134-11252242)
chr4 (48-104)||(17277874-17277930)
chr4 (30-87)||(10432189-10432246)
[»] chr5 (36 HSPs)
chr5 (3-111)||(20860323-20860431)
chr5 (3-104)||(17469570-17469671)
chr5 (15-103)||(23387560-23387648)
chr5 (3-101)||(19053085-19053183)
chr5 (27-104)||(19003777-19003854)
chr5 (15-111)||(24162016-24162112)
chr5 (3-111)||(26122366-26122474)
chr5 (3-114)||(28666476-28666587)
chr5 (3-110)||(34488841-34488948)
chr5 (3-104)||(25920815-25920916)
chr5 (27-120)||(26069257-26069350)
chr5 (30-101)||(25400753-25400824)
chr5 (3-121)||(29987940-29988059)
chr5 (3-109)||(18832206-18832312)
chr5 (15-116)||(22797420-22797521)
chr5 (3-104)||(34132070-34132171)
chr5 (3-118)||(24263748-24263863)
chr5 (3-103)||(31600088-31600188)
chr5 (33-111)||(24320526-24320605)
chr5 (9-111)||(23214830-23214932)
chr5 (58-111)||(19761586-19761639)
chr5 (56-104)||(15691305-15691353)
chr5 (3-111)||(18939504-18939612)
chr5 (32-104)||(23110208-23110280)
chr5 (15-111)||(23338888-23338983)
chr5 (56-100)||(25572494-25572538)
chr5 (3-111)||(26348426-26348534)
chr5 (33-84)||(24658332-24658383)
chr5 (9-104)||(26117427-26117522)
chr5 (55-111)||(23266852-23266908)
chr5 (5-101)||(28254877-28254973)
chr5 (5-104)||(22845807-22845906)
chr5 (4-53)||(16521966-16522015)
chr5 (74-111)||(24513201-24513238)
chr5 (64-104)||(17831739-17831778)
chr5 (3-71)||(24513231-24513299)
[»] chr2 (31 HSPs)
chr2 (3-119)||(23010040-23010156)
chr2 (3-104)||(17891715-17891816)
chr2 (20-101)||(28918189-28918270)
chr2 (3-105)||(18758285-18758387)
chr2 (27-104)||(35680112-35680189)
chr2 (5-111)||(16157089-16157195)
chr2 (3-111)||(34574497-34574606)
chr2 (31-111)||(21905738-21905818)
chr2 (3-94)||(27907544-27907635)
chr2 (27-104)||(17350986-17351063)
chr2 (3-104)||(26313162-26313263)
chr2 (3-111)||(28930258-28930367)
chr2 (3-111)||(29144618-29144727)
chr2 (15-111)||(24086311-24086407)
chr2 (3-109)||(22569038-22569144)
chr2 (3-111)||(25886196-25886304)
chr2 (3-90)||(22627368-22627455)
chr2 (32-111)||(16257873-16257952)
chr2 (4-111)||(18553274-18553381)
chr2 (30-101)||(27540280-27540351)
chr2 (47-104)||(25882582-25882639)
chr2 (4-92)||(18545257-18545345)
chr2 (3-111)||(20379270-20379378)
chr2 (15-111)||(25537552-25537648)
chr2 (55-111)||(32130704-32130760)
chr2 (55-111)||(32137917-32137973)
chr2 (55-111)||(32139339-32139395)
chr2 (55-105)||(29717368-29717419)
chr2 (3-111)||(18458369-18458478)
chr2 (3-104)||(25196595-25196696)
chr2 (3-104)||(26651649-26651750)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-103)||(4820-4908)
[»] scaffold0043 (1 HSPs)
scaffold0043 (3-104)||(88448-88549)
[»] scaffold0451 (2 HSPs)
scaffold0451 (3-109)||(5714-5820)
scaffold0451 (27-104)||(10105-10182)
[»] scaffold0024 (1 HSPs)
scaffold0024 (15-94)||(41335-41414)
[»] scaffold0386 (1 HSPs)
scaffold0386 (3-104)||(4884-4983)
[»] scaffold0555 (1 HSPs)
scaffold0555 (30-107)||(6464-6541)
[»] scaffold0032 (1 HSPs)
scaffold0032 (19-107)||(92837-92925)
[»] scaffold0111 (1 HSPs)
scaffold0111 (3-104)||(21424-21525)
[»] scaffold0005 (1 HSPs)
scaffold0005 (27-104)||(243843-243919)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-111)||(192106-192214)
[»] scaffold0019 (3 HSPs)
scaffold0019 (56-107)||(35215-35266)
scaffold0019 (55-114)||(24838-24897)
scaffold0019 (10-86)||(182541-182617)
[»] scaffold0115 (1 HSPs)
scaffold0115 (56-106)||(36141-36191)
[»] scaffold0258 (1 HSPs)
scaffold0258 (9-104)||(20264-20359)
[»] scaffold0056 (1 HSPs)
scaffold0056 (20-111)||(23037-23128)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-85)||(95619-95690)
[»] scaffold0360 (1 HSPs)
scaffold0360 (3-94)||(16490-16580)
[»] scaffold0072 (1 HSPs)
scaffold0072 (57-111)||(38329-38383)
[»] scaffold0637 (1 HSPs)
scaffold0637 (56-88)||(7423-7455)


Alignment Details
Target: chr3 (Bit Score: 287; Significance: 1e-161; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 3 - 328
Target Start/End: Complemental strand, 12372445 - 12372119
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  12372445 acaaatgtcccaaaatcataggtcactgttctaatactcctcctttttgctcgtaaaacctactgaaaatgattgaaaaaaatgctaagaattacgtaag 12372346  T
Q  103 ataacctgttattaaaatccttttcaaa-gaatttgttgaaatcacttaatttaggaaacaagattgaaagttgaagatattttttgggttaaaccaagt 201  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12372345 ataacctgctattaaaatccttttcaaaagaatttgttgaaatcactaaatttaggaaaccagattgaaagttgaagatattttttgggttaaaccaagt 12372246  T
Q  202 agactaatgcttgaagtcattttgattcatttaaatgatcgacttcttccaatatatgtacaacataaataccgaacctagcaatcccttcttgattgac 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12372245 agactaatgcttgaagtcattttgattcatttaaatgatcgacttcttccaatatatgtacaacataaataccgaacctagcaatcccttcttgattgac 12372146  T
Q  302 tgaaatacacatggctaacacttataa 328  Q
    |||||||||||||||||||||||||||    
T  12372145 tgaaatacacatggctaacacttataa 12372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 34276550 - 34276442
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||||| || ||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||     
T  34276550 acaaaagtcccaaaatcataggcaatcgttataatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaaa 34276451  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  34276450 atgacctgt 34276442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 22246981 - 22247081
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| |||| | |||| |||||||||||||  ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  22246981 acaaatgtcccaaaatcatagtcaattgctctaatactcctctattttgctggtaaaacctactgaaaatgactgaaaaa-atgctaagaataacgtaag 22247079  T
Q  103 at 104  Q
    ||    
T  22247080 at 22247081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 12517302 - 12517382
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  12517302 ttctaatactcctcctttttgctactaaaacctactgaaaatgactgaaaaagatgctaagaataacgtaagatgacctgt 12517382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 18457224 - 18457116
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||| ||||||||  ||||||    
T  18457224 acaaaagtcccgaaatcataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaataacatcctaagaatagcgtaag 18457125  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  18457124 atgacctgt 18457116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 19912591 - 19912672
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  19912591 gttctaatactcctcttttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataacgtaagatgacctgt 19912672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 8145232 - 8145340
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| |||||| ||||||||||| ||||||||  ||||||||||||||| ||| ||||||||||||||||||| | |||||    
T  8145232 acaaaagtcccgaaatcataggcaattgttttaatactcctcatttttgctgctaaaacctactgaaattgattgaaaaacatgctaagaataatgtaag 8145331  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  8145332 atgacctgt 8145340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 8115407 - 8115306
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||||| || |||||| || ||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||||| ||| |||||||    
T  8115407 acaaaagtcccaatatcataggcaatcgttctaatactcctcctttttgctactaaaacctactcaaaataactggaaaacatgctaaaaataacgtaag 8115308  T
Q  103 at 104  Q
    ||    
T  8115307 at 8115306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 18535754 - 18535855
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| ||| || |||| |||||||||||||   |||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  18535754 acaaatgtcccgaaatcataagcaattgatctaatactcctctgctttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaag 18535853  T
Q  103 at 104  Q
    ||    
T  18535854 at 18535855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 22470515 - 22470414
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||| | |||| ||| || |||| ||||| |||||||  ||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  22470515 acaaatgtcacgaaatcatatgcaattgctctaacactcctctgttttgctggtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaag 22470416  T
Q  103 at 104  Q
    ||    
T  22470415 at 22470414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 819930 - 819853
Alignment:
Q  32 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    |||||||||||||  || |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  819930 tctaatactcctctattatgcttgtaaaacctactgaaattgactgaaaaacatgctaagaataacgtaagatgacct 819853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 8765658 - 8765755
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 100  Q
    ||||| ||||| |||| |||||  || ||||||||||||||| |||||||   ||||||||| ||||||||||||||||||||||||||||| |||||    
T  8765658 acaaaagtcccgaaatcataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgta 8765755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 12771288 - 12771209
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    |||||||||||| || ||||||||  |||||  |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  12771288 gttctaatactcatcatttttgctgctaaaatatactgaaaatgactgaaaaacatgctaagaataacgtaagatgacct 12771209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 8770575 - 8770645
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 100  Q
    ||||||||||||||| |||||||   ||||||||| ||||||||||||||||||||||||||||| |||||    
T  8770575 gttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataacgta 8770645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 52935602 - 52935540
Alignment:
Q  47 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  52935602 ttttgctggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaagatgacct 52935540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 3114810 - 3114726
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgt 99  Q
    |||| |||||| |||  |||||||||||||  ||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  3114810 aaatcataggcaattactctaatactcctctgttttgctggtaaaacctactgtaaaagactgaaaaacatgctaagaataacgt 3114726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 7805750 - 7805834
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||||||||||  |||||   ||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  7805750 attgctctaatactcctctattttggatgtaaaacatactgaaaatgattgaaaaacatgctaagaataacgtaagatgacctgt 7805834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 16242306 - 16242199
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||| |||||| |||||| || |||||||||||||| |||||| ||  |||||| |||| ||||||| ||||||| ||||||||||| |||||||    
T  16242306 acaaaagtctcaaaatcataggcaatcgttctaatactccttcttttttctgctaaaac-tactaaaaatgagtgaaaaatatgctaagaataacgtaag 16242208  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  16242207 atgacctgt 16242199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 25851049 - 25850953
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| || ||| ||||||||||||||| ||||  |||| |||||| ||||| ||||||||||||||||||||| || |||||| ||||||    
T  25851049 aaatcataggcaatcgttttaatactcctcctttctgctgctaaatcctactaaaaataactgaaaaacatgctaagaataacataagatgacctgt 25850953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 20891758 - 20891651
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| | || |||||| |||| | ||||| ||||   ||||| | ||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  20891758 acaaatgtcccgatatcataggcaattgatataatattcctatgttttgttggtaaaacctactgaaaacgactgaaaaatatgctaagaataacgtaag 20891659  T
Q  103 ataacctg 110  Q
    || |||||    
T  20891658 atgacctg 20891651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 1096862 - 1096766
Alignment:
Q  14 aaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||| |||||| || |||||| || ||||||||||||||  ||||||  ||||||||||||| |||||||||| |||||| ||||||||| ||||||    
T  1096862 aaaatcataggcaatcgttctagtaatcctcctttttgctgctaaaactgactgaaaatgact-aaaaacatgcaaagaataacgtaagatgacctgt 1096766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 14977790 - 14977891
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| |||||| ||||||||||||||||||||  |||| | |||| |||   ||||||||| ||||||||||| |||||||    
T  14977790 acaaaagtcccgaaatcataggcaattgttataatactcctcctttttgctactaaatcatactaaaataaactgaaaaatatgctaagaataacgtaag 14977889  T
Q  103 at 104  Q
    ||    
T  14977890 at 14977891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 13938959 - 13938851
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| || ||| || |||||||||||||||||||||| |  ||||||||||||||| ||  | || |||||||||||||| ||||||     
T  13938959 acaaaagtcccgaaatcattggcaatcgttctaatactcctcctttttggtgctaaaacctactgaaattgctttaacaacatgctaagaataacgtaaa 13938860  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  13938859 atgacctgt 13938851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 16228457 - 16228349
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||||| || |||||||||||||||||||||| |  ||   |||||| |||   |||||||| |||||||||||| |||||||    
T  16228457 acaaaagtcccaaaatcataggcaatagttctaatactcctcctttttgttgctatttcctactaaaataaactgaaaagcatgctaagaataacgtaag 16228358  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  16228357 atgacctgt 16228349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 19387937 - 19387869
Alignment:
Q  38 actcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataa 106  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||| ||||| ||| || ||||||||    
T  19387937 actcctctattttgctggtaaaacctactgaaaatgactgaaaaacaagctaaaaataacataagataa 19387869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 13906696 - 13906605
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    ||||||||||| |||| ||| || |||| |||||||||||||| || | || | |||||||||| ||| |||| ||||||||||||||||||    
T  13906696 acaaatgtcccgaaatcataagcaattgatctaatactcctccattatacttgcaaaacctactaaaattgacagaaaaacatgctaagaat 13906605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 2508797 - 2508731
Alignment:
Q  38 actcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| ||||||| |||  |||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  2508797 actcatccttttcgctgttaaaacttactgaaaatgactgaaaaacatactaagaataacgtaagat 2508731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22450430 - 22450544
Alignment:
Q  1 tcacaaatgtcccaaaatg-ataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgt 99  Q
    ||||||||||||||||||  ||| || |||  |||||||||||||  || ||   |||||||||| |||||| ||||||||| |||||||||||| ||||    
T  22450430 tcacaaatgtcccaaaatttataagcaattactctaatactcctctattctggaagtaaaacctaatgaaaacgactgaaaagcatgctaagaataacgt 22450529  T
Q  100 aagataacctgttat 114  Q
    ||||| |||| ||||    
T  22450530 aagatgacctattat 22450544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 17135107 - 17135159
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatg 86  Q
    |||||||||||  ||||||| |||||||||||| |||||||||||||||||||    
T  17135107 taatactcctctattttgctagtaaaacctactaaaaatgactgaaaaacatg 17135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 20886904 - 20886960
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||| |||||| || ||||||||||||||||||| ||||||||| ||||||    
T  20886904 gtaaaacctattgaaaacgattgaaaaacatgctaagaataacgtaagatgacctgt 20886960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 31284016 - 31283908
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| ||| || |||| |||||||||| ||    ||| | |||||||||||| ||||||| ||||||||||| ||||||| |||| ||    
T  31284016 acaaatgtcccgaaatcataagcaattgctctaatactcttctacattgttggtaaaacctacttaaaatgattgaaaaacatgataagaataacgttag 31283917  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  31283916 atgacctgt 31283908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 5521551 - 5521594
Alignment:
Q  47 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 90  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  5521551 ttttgctggtaaaacctattgaaaatgactgaaaaacatgctaa 5521594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 19170230 - 19170163
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    |||||| ||||||||||| ||||| ||  ||||||| ||||||| |||| ||||||||||||||||||    
T  19170230 attgttttaatactcctcgttttttctgctaaaaccaactgaaattgaccgaaaaacatgctaagaat 19170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 2166116 - 2166051
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 100  Q
    |||||||||||||||||| |  ||||||||||||||||||||  |||||||||| |||||| |||||    
T  2166116 taatactcctcctttttgttgctaaaacctactgaaaatgac-aaaaaacatgccaagaataacgta 2166051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 6075984 - 6076054
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||||||||||||| ||| |||| || ||||||||||||| |||||||||||| ||  |||||| ||||||    
T  6075984 ttctaatactcctcttttgtgcttgttaaacctactgaaattgactgaaaaacgtgtaaagaataacgtaa 6076054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 3429333 - 3429236
Alignment:
Q  7 atgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||| |||| ||| || |||  |||||||||||||   |||||| |||||||||||| |||  || ||||||||||| ||||||| |||||||||    
T  3429333 atgtcccgaaatcatatgcaattcctctaatactcctctggtttgctggtaaaacctactaaaatagaatgaaaaacatgataagaataacgtaagat 3429236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 27852664 - 27852616
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 103  Q
    |||||||||||||||||||||| ||| ||||||||| ||| ||||||||    
T  27852664 gtaaaacctactgaaaatgactaaaagacatgctaaaaataacgtaaga 27852616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 25530779 - 25530740
Alignment:
Q  68 aaaatgactgaaaaacatgctaagaattacgtaagataac 107  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  25530779 aaaatgactgaaaaatatgctaagaataacgtaagataac 25530740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 20431468 - 20431518
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctac 65  Q
    |||| |||||| || ||||||||||||||||||||||||  ||||||||||    
T  20431468 aaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctac 20431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 14641616 - 14641724
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| || ||||||| |||||  |||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  14641616 acaaaagttccaaaatcataggtaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaag 14641715  T
Q  103 ataacctgt 111  Q
    |||||||||    
T  14641716 ataacctgt 14641724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 22564662 - 22564556
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| | |||| |||| |||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  22564662 acaaatgtcccgaaatcacaggcaattgctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaag 22564563  T
Q  103 ataacct 109  Q
    || ||||    
T  22564562 atgacct 22564556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 22845957 - 22845863
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |  |||||| |||||||||| ||||||||||||||||||| | |||||||||    
T  22845957 tcccaaaattataggcaattgttctaatactcctcctttttgttgttaaaacatactgaaaataactgaaaaacatgctaagagtaacgtaagat 22845863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 1636618 - 1636718
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||| ||||||||| |||||| ||||||||||||||| ||||||||||   ||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  1636618 acaaatatcccaaaattataggcaattgttctaatactc-tcctttttgccgctaaaacctactaaaaataactgaaaaacatgctaagaataacgtaag 1636716  T
Q  103 at 104  Q
    ||    
T  1636717 at 1636718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 23644430 - 23644322
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| |||||| |||| ||||||||||||   ||||||| |||||||||||| ||||  | ||||||||||||||||||| |||||||    
T  23644430 acaaatgtcccgaaatcataggcaattgatctaatactcctatgttttgctggtaaaacctactaaaaacaattgaaaaacatgctaagaataacgtaag 23644331  T
Q  103 ataacctgt 111  Q
    |||||||||    
T  23644330 ataacctgt 23644322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 24469782 - 24469890
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||||||||||||||||||||||||   |||||||||||||||||| |||||||||| |||| ||| |||||||    
T  24469782 acaaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgtcaaaacctactgaaaatgattgaaaaacatactaaaaataacgtaag 24469881  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  24469882 atgacctgt 24469890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 17822137 - 17822035
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaa 101  Q
    ||||| |||||||||| |||||| || ||||||||||||||||||||||||  |||| |||| ||||||| ||| |||||||||||||||||| ||||||    
T  17822137 acaaaagtcccaaaatcataggcaatcgttctaatactcctcctttttgctgctaaatcctattgaaaataactagaaaaacatgctaagaataacgtaa 17822038  T
Q  102 gat 104  Q
    |||    
T  17822037 gat 17822035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 19577650 - 19577562
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaag 91  Q
    ||||| |||| ||||| |||||| || ||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  19577650 acaaaagtccaaaaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaataactaaaaaacatgctaag 19577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 9519724 - 9519817
Alignment:
Q  11 cccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||| |||||| |||| ||||||||||||||||||||||  ||||  ||||||||||| ||| ||||||||||||| ||| |||||||||    
T  9519724 cccaaaatcataggcaattgctctaatactcctcctttttgctgctaaatactactgaaaataactaaaaaacatgctaaaaataacgtaagat 9519817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Original strand, 14723696 - 14723769
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||||||||||||| |||| |||| ||||||| |||||||| |||||||||||| |||||||||    
T  14723696 ttctaatactcctcctttttgctcctaaatcctattgaaaataactgaaaagcatgctaagaataacgtaagat 14723769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 9841032 - 9841104
Alignment:
Q  32 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| ||| ||||| ||||||| |||||||||    
T  9841032 tctaatactcctcctttctgctggtaaaacctactgaaaatgactaaaacacatgttaagaataacgtaagat 9841104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 24480035 - 24480114
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    |||| |||||||||||||||||||   |||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||    
T  24480035 gttccaatactcctcctttttgctgccaaaacctactgaaaatgattgaaatacatgctaagaataacgtaagatgacct 24480114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 17384038 - 17384108
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||| | |||||||    
T  17384038 taatactcctcctttttgctgctaaaacctaatgaaaataactgaaaaacatgctaagaataatgtaagat 17384108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 9848158 - 9848243
Alignment:
Q  14 aaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgt 99  Q
    ||||| |||||  |||| |||||||||| |||||||||||  ||||||||||| ||||||||||||||||||| ||||||| ||||    
T  9848158 aaaatcataggaaattgctctaatactcatcctttttgctaataaaacctactaaaaatgactgaaaaacatgttaagaataacgt 9848243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 21687242 - 21687141
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||||||||  | | | |||| |||| ||||| ||  ||||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  21687242 acaaatgtcccaaaatcctcgacaattgatctattactcttctgttttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaag 21687143  T
Q  103 at 104  Q
    ||    
T  21687142 at 21687141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 22404367 - 22404266
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||| | || ||| ||||||||||||||||||||  ||||||||||||||| | ||||||||||||| ||||||| ||| |||    
T  22404367 acaaaagtcccgaaatcatagacaatcgttttaatactcctcctttttgctgctaaaacctactgaaatttactgaaaaacatgataagaataacgaaag 22404268  T
Q  103 at 104  Q
    ||    
T  22404267 at 22404266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 14076392 - 14076488
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| |||  ||||||||||||||| ||||||  |||| | |||||||||| |||||||| |||||||||||| ||||||||| ||||||    
T  14076392 aaatcataggcaatttctctaatactcctcctctttgctgctaaatcatactgaaaataactgaaaaccatgctaagaataacgtaagatgacctgt 14076488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 19246260 - 19246368
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| ||| || |||| |||||||||| ||  |||||||  ||||||||||| |||  |||||||||||||||| ||||| |||| ||    
T  19246260 acaaatgtcccaaaatcataagcaattgatctaatactcatctattttgctgttaaaacctactaaaatagactgaaaaacatgcttagaataacgttag 19246359  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  19246360 atgacctgt 19246368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 19594078 - 19593999
Alignment:
Q  14 aaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaaga 92  Q
    ||||| |||||| ||||||||||||||||||||||||||   ||||||||||||||||| |||  |||||||||||||||    
T  19594078 aaaatcataggcaattgttctaatactcctcctttttgcagctaaaacctactgaaaataactaaaaaaacatgctaaga 19593999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 2588280 - 2588393
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||| | |||| |||| | ||||||||||||||| || ||| || | |||||||| | ||||||||||||||||| ||||||| ||  |||||||    
T  2588280 acaaatgtcacgaaatcatagacaattgttctaatactcatcttttatgttggtaaaaccaattgaaaatgactgaaaaatatgctaaaaacaacgtaag 2588379  T
Q  103 ataacctgttatta 116  Q
    || || ||||||||    
T  2588380 atgacttgttatta 2588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 14078021 - 14078130
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactg-aaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||| ||||| |||| |||||| |||| ||||||||||||||| ||||||  |||| ||||||| ||||| ||| |||| |||||||||||| | ||||    
T  14078021 acaaaagtcccgaaatcataggcaattgctctaatactcctcctctttgctgctaaatcctactgaaaaataactaaaaaccatgctaagaataatgtaa 14078120  T
Q  102 gataacctgt 111  Q
    ||| ||||||    
T  14078121 gatgacctgt 14078130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Original strand, 17847764 - 17847864
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||| ||||||||| |||| | || |||||||||||| || ||||||||  |||||| |||| ||||| ||| ||||||||||||||||| || ||||    
T  17847764 acaaatatcccaaaatcatagacaatcgttctaatactcttcatttttgctgctaaaacttacttaaaataactaaaaaacatgctaagaataacataag 17847863  T
Q  103 a 103  Q
    |    
T  17847864 a 17847864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 21060515 - 21060431
Alignment:
Q  5 aaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgcta 89  Q
    |||||||| ||||| ||| || |||| |||||||||||||  ||||| |  ||||||||| ||||||||||||||||||||||||    
T  21060515 aaatgtccaaaaatcatatgcaattgatctaatactcctctattttggttttaaaacctattgaaaatgactgaaaaacatgcta 21060431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 8038134 - 8038055
Alignment:
Q  32 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||| ||||| ||| ||| || |||||| || ||||||||| ||||||||| ||||||||| ||||||    
T  8038134 tctaatactcctccttattgctggtataacttagtgaaaaagattgaaaaacaggctaagaataacgtaagatgacctgt 8038055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 9507383 - 9507304
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaa 82  Q
    ||||||||||| |||| ||| || |||||||||||||||| |  || | || ||||||||||||||||||||||||||||    
T  9507383 acaaatgtcccgaaatcataagcaattgttctaatactcccctgttctactggtaaaacctactgaaaatgactgaaaaa 9507304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 4340679 - 4340749
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||| ||  |||||||||||||||||  ||||||||||| |||| ||| |||||||||    
T  4340679 taatactcctcctttttactgctaaaacctactgaaaatatctgaaaaacatactaaaaataacgtaagat 4340749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 21932458 - 21932560
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctac-tgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||||||||| ||||| |||| | |||  ||||||||||||||||||||||  ||||||| || ||||||||  | ||||||||||||||||| || |||    
T  21932458 acaaatgtcctaaaatcatagacaatttctctaatactcctcctttttgctattaaaacccacatgaaaatgtttaaaaaacatgctaagaataacttaa 21932557  T
Q  102 gat 104  Q
    |||    
T  21932558 gat 21932560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 8246599 - 8246687
Alignment:
Q  5 aaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    |||||||||||||| |||| | |||| ||||||||||||   ||||  | |||||||||||| ||||||||||||||| |||||||||||    
T  8246599 aaatgtcccaaaatcatagacaattgatctaatactcctatgtttttatggtaaaacctactaaaaatgactgaaaaa-atgctaagaat 8246687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 21760492 - 21760412
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||| ||||||||||||||  ||||  ||| ||||||||||||||||| ||||||||||| || |||| | ||||||    
T  21760492 ttctaataatcctcctttttgctgctaaattctattgaaaatgactgaaaaatatgctaagaataacttaaggtgacctgt 21760412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 26820897 - 26820957
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttatta 116  Q
    ||||||||| ||||||| ||||||||||||||||||| | ||||||||| |||||| ||||    
T  26820897 taaaacctaatgaaaataactgaaaaacatgctaagagtaacgtaagatgacctgtcatta 26820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 9339039 - 9338980
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 114  Q
    |||| ||||| ||||||||||||||||||||| ||||||| ||||||||| || ||||||    
T  9339039 gtaatacctattgaaaatgactgaaaaacatgttaagaatgacgtaagatgacatgttat 9338980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 14727171 - 14727226
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||||| ||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  14727171 taaaacctactaaaaatgactgaaaaacatggtaataataacgtaagatgacctgt 14727226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 27961252 - 27961299
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  27961252 aaaacctactgaaaatgattgaaaaacatgttaagaataacgtaagat 27961299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 19721953 - 19721868
Alignment:
Q  8 tgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    ||||||||||| ||| || |||| |||||||||||||  || |||| |||||||||||||||| ||||| ||||||||  |||||||    
T  19721953 tgtcccaaaatcataagcaattgatctaatactcctctattctgcttgtaaaacctactgaaattgact-aaaaacattttaagaat 19721868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 21079833 - 21079748
Alignment:
Q  4 caaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgcta 89  Q
    ||||||||| ||||| ||| || |||| |||||||||||||  ||||| |  ||||||||||| ||||||  ||||||||||||||    
T  21079833 caaatgtccaaaaatcatatgcaattgatctaatactcctctattttggttttaaaacctactaaaaatggttgaaaaacatgcta 21079748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 32760007 - 32760040
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaa 90  Q
    ||||||||||||||||||||||||||||||||||    
T  32760007 aaaacctactgaaaatgactgaaaaacatgctaa 32760040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 11136930 - 11137002
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 103  Q
    |||||||| ||||||||||||||  |||| |||||| |||   ||||||||||||||||||||| | ||||||    
T  11136930 ttctaataatcctcctttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataatgtaaga 11137002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 13216392 - 13216316
Alignment:
Q  29 tgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaa-catgctaagaattacgtaagat 104  Q
    ||||||||||||||||   |||| | | |||||||| | ||||||||||||||| |||||||||||| |||||||||    
T  13216392 tgttctaatactcctctactttgatggcaaaacctattaaaaatgactgaaaaaacatgctaagaataacgtaagat 13216316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 21036967 - 21037015
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  21036967 taaaacctactaaaaataactgaaaaacatgataagaatgacgtaagat 21037015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 21152577 - 21152517
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 90  Q
    ||||||||||||||||||||||||  | || |||||| ||||| | |||||||||||||||    
T  21152577 gttctaatactcctcctttttgctgcttaatcctactaaaaataattgaaaaacatgctaa 21152517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 9897956 - 9897880
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| ||||| |||||||  ||||| | ||||||| |||||||||||||| |||| |||||||||||  |||||||||    
T  9897956 attgatctaacactcctctgttttgttggtaaaac-tactgaaaatgactaaaaatcatgctaagaacgacgtaagat 9897880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 17379536 - 17379495
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaa 71  Q
    |||||||||||| |||||||||||  ||||||||||||||||    
T  17379536 gttctaatactcatcctttttgcttataaaacctactgaaaa 17379495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 9387603 - 9387643
Alignment:
Q  74 actgaaaaacatgctaagaattacgtaagataacctgttat 114  Q
    ||||||||||||||||||||| ||||| ||| |||||||||    
T  9387603 actgaaaaacatgctaagaataacgtaggatgacctgttat 9387643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 21845835 - 21845735
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactga-aaaacatgctaagaattacgtaagataacc 108  Q
    |||| |||| |||||| || ||| ||||| ||||||| ||| ||  ||||| ||  ||||||||||||| |||||||| ||||||| ||||||||| |||    
T  21845835 tcccgaaatcataggcaatcgttataataatcctcctcttttcttctaaaaacttttgaaaatgactgaaaaaacatgttaagaataacgtaagatgacc 21845736  T
Q  109 t 109  Q
    |    
T  21845735 t 21845735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 30356299 - 30356355
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||| ||||||||||| ||||||||| ||||||| ||| || || ||||||    
T  30356299 gtaaaacctaatgaaaatgactaaaaaacatgttaagaataacgcaaaatgacctgt 30356355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 13313384 - 13313284
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  13313384 acaaaagtcccgaaatcataggcaattgttctaatactcctcctttttgctgctaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaag 13313285  T
Q  103 a 103  Q
    |    
T  13313284 a 13313284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 20400318 - 20400426
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||  || ||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||| |||||||    
T  20400318 acaaaagtcccgaaatcataggaaatcgttctaatactcctcctttttgctgctaaaacccactgaaaatgactgaaaagcatgctaagaataacgtaag 20400417  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  20400418 atgacctgt 20400426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14271823 - 14271933
Alignment:
Q  1 tcacaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 100  Q
    |||||||||||||||||| |||||| |||  ||||||||||||   ||||||| ||||||||||||||||| |  ||||||||||||||||||| |||||    
T  14271823 tcacaaatgtcccaaaatcataggcaattactctaatactcctttgttttgctagtaaaacctactgaaaaaggttgaaaaacatgctaagaataacgta 14271922  T
Q  101 agataacctgt 111  Q
    |||| ||||||    
T  14271923 agatgacctgt 14271933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 15176545 - 15176439
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||||||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||||| | |||||    
T  15176545 acaaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaacacatgctaagaataatgtaag 15176446  T
Q  103 ataacct 109  Q
    || ||||    
T  15176445 atgacct 15176439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 24380464 - 24380355
Alignment:
Q  5 aaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| || |||| |||||| ||||||||||||||||||  || |||| |||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  24380464 aaatgttccgaaatcataggcaattgttctaatactcctctgttctgctggtaaaacctactgaaattgagtgaaaaacatgctaagaataacgtaagat 24380365  T
Q  105 aacctgttat 114  Q
     || ||||||    
T  24380364 gacatgttat 24380355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 24583284 - 24583171
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||||||||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||| || |||     
T  24583284 acaaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctaaaatctactaaaaatgactgaaaaacatgctaagaataacataaa 24583185  T
Q  103 ataacctgttatta 116  Q
    || |||||| ||||    
T  24583184 atgacctgtcatta 24583171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 23867942 - 23867834
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||||||||||||||| | ||||||  ||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  23867942 acaaaagtcccgaaatcataggcaatcgttctaatactcctcgtctttgctgctaaaacctactaaaaatgcctgaaaaacatactaagaattacgtaag 23867843  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  23867842 atgacctgt 23867834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 17510900 - 17510994
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    |||| |||||| || |||||||||||||||||||||||   ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  17510900 aaatcataggcaatcgttctaatactcctcctttttgcagctaaaacctactgaaagtgactgaaaaacatgctaagaataatgtaagatgacct 17510994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 24090985 - 24090892
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||| |||||| ||||||||||||||| |||||||||||  ||||||||| | ||||| ||||||||||||||||||||| |||||||    
T  24090985 gtcccgaaatcataggcaattgttctaatactcttcctttttgctgctaaaacctaattaaaataactgaaaaacatgctaagaataacgtaag 24090892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 24389747 - 24389848
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    ||||||||| |||||| |||||||||||||||||| |||||| |  ||||||||||||||||| ||| |||||| | |||||||| ||||||||| ||||    
T  24389747 tcccaaaattataggcaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactaaaaaacttactaagaataacgtaagatgacct 24389846  T
Q  110 gt 111  Q
    ||    
T  24389847 gt 24389848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 24520108 - 24520019
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgt 99  Q
    ||||||||| |||||| ||||||||||||||  |||||||||||  |||| |||||||||||| ||||||||||||||||||||| ||||    
T  24520108 tcccaaaattataggcaattgttctaatacttatcctttttgctactaaatcctactgaaaataactgaaaaacatgctaagaataacgt 24520019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 19265806 - 19265914
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| ||||||||||||||||||||||||| |  |||| |||||| |||   ||||||||||||||||||||| |||||||    
T  19265806 acaaaagtcccgaaatcataggcaattgttctaatactcctcctttttgttgttaaatcctactaaaataaactgaaaaacatgctaagaataacgtaag 19265905  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  19265906 atgacctgt 19265914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 19704987 - 19705071
Alignment:
Q  20 ataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| || |||||||||||||| |||| ||||  |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  19704987 ataggcaatcgttctaatactccttctttatgctgttaaaacctactgaaaatgactgaaaaacatactaagaataacgtaagat 19705071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 29765496 - 29765396
Alignment:
Q  12 ccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagataacctg 110  Q
    ||||||| |||||| || |||||||||| | |||||||||||  ||||||||||||||||| |||  ||||||||||||||||| ||||||||| |||||    
T  29765496 ccaaaatcataggcaatcgttctaatacacttcctttttgctgctaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaagatgacctg 29765397  T
Q  111 t 111  Q
    |    
T  29765396 t 29765396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 30117727 - 30117663
Alignment:
Q  47 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  30117727 ttttgctggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataacgtaagataacctgt 30117663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 29381075 - 29380965
Alignment:
Q  2 cacaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgta 100  Q
    |||||| ||| | |||| |||||| || ||||||||||||||||||||||||  ||||||||| ||||| ||| |  ||||||||||||||||| |||||    
T  29381075 cacaaaagtcacgaaatcataggcaatcgttctaatactcctcctttttgctactaaaacctattgaaattgaataaaaaaacatgctaagaataacgta 29380976  T
Q  101 agataacctgt 111  Q
    |||| ||||||    
T  29380975 agatgacctgt 29380965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 18446945 - 18446866
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    ||||||||||||||||||||||||  |||| ||||||| |||| ||||||||||||| ||| ||| ||||||||| ||||    
T  18446945 gttctaatactcctcctttttgctgctaaatcctactggaaataactgaaaaacatggtaaaaataacgtaagatgacct 18446866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 104
Target Start/End: Original strand, 22501827 - 22501918
Alignment:
Q  13 caaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| |||||| |||  |||||||||||||  ||||||| |||||||| |||||||| || ||||||||||| ||||||| |||||||||    
T  22501827 caaaatcataggcgattactctaatactcctctgttttgctggtaaaaccaactgaaaaagattgaaaaacatgataagaataacgtaagat 22501918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 17835527 - 17835633
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| ||| |  |||||||||||||||| |  || |||| |||||||||||||||| | ||||||||| || |||||||| |||||||    
T  17835527 acaaatgtcccgaaatcataagaaattgttctaatactccactattctgcttgtaaaacctactgaaattaactgaaaaatatactaagaataacgtaag 17835626  T
Q  103 ataacct 109  Q
    || ||||    
T  17835627 atgacct 17835633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 28621594 - 28621696
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacc 108  Q
    ||||| |||| |||||| || |||||||||||| | ||||||  |  ||||||||| ||||||| ||||||||||||||||||||| |||| |||| |||    
T  28621594 gtcccgaaatcataggcaatcgttctaatactcattcttttttatgctaaaacctaatgaaaataactgaaaaacatgctaagaataacgttagatgacc 28621693  T
Q  109 tgt 111  Q
    |||    
T  28621694 tgt 28621696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 14077106 - 14077206
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| ||| || |||| ||||||||||||| ||| ||   |||||||||||| ||||||||| ||||||||| ||||||  |||||||    
T  14077106 acaaatgtcccaaaatcataagcaattgatctaatactcctcttttctggatgtaaaacctact-aaaatgactaaaaaacatgttaagaagaacgtaag 14077204  T
Q  103 at 104  Q
    ||    
T  14077205 at 14077206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 18007544 - 18007620
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||| ||| || ||||| | |||||||||||||||||||||||||||| ||||||| ||| |||||||||    
T  18007544 attgttctaatattccaccattttgttggtaaaacctactgaaaatgactgaaaaa-atgctaacaataacgtaagat 18007620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 4007240 - 4007156
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||||||||||  ||||||| || ||||||||| ||||||||||||||||||||||| | | || |||||| ||||||    
T  4007240 attgatctaatactcctctattttgctggtgaaacctactaaaaatgactgaaaaacatgctaatattaacataagatgacctgt 4007156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 6886652 - 6886755
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctact--gaaaatgactgaaaaacatgctaagaattacgta 100  Q
    ||||||||||| |||| |||||| |||  |||||||||||||  ||||| | ||||||||||||   |||| | |||||||||||||||||||| |||||    
T  6886652 acaaatgtcccgaaatcataggcaattactctaatactcctctattttgatggtaaaacctactaaaaaaaagtctgaaaaacatgctaagaataacgta 6886751  T
Q  101 agat 104  Q
    ||||    
T  6886752 agat 6886755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 34499235 - 34499311
Alignment:
Q  26 cattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| ||||||||||| |||||| ||| | ||||||||||||| ||||||||| ||| |||||||    
T  34499235 cattgctctaatactcatcctttttgctggtaaaatctaataaaaatgactgaaagacatgctaaaaataacgtaag 34499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 21695472 - 21695425
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  21695472 aaaacctactgaaattgactgaaaaacatgctaagaataacgtaagat 21695425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 26888470 - 26888568
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||| |||||||||| |||| | || |||| ||||||||||||||||| |  ||||||||||| ||||| | ||||||| ||||||| ||| ||||||    
T  26888470 acaaaagtcccaaaatcatagacaatcgttccaatactcctcctttttgttgctaaaacctactaaaaataaatgaaaaatatgctaaaaataacgtaa 26888568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 19791377 - 19791478
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| |||| | |||||| |||||||||||   |||||| |||||||||| | |||  ||||||||||||||||||  || |||||||    
T  19791377 acaaatgtcccgaaatcatagacaattgttttaatactcctctggtttgctggtaaaacctattaaaatagactgaaaaacatgctaattataacgtaag 19791476  T
Q  103 at 104  Q
    ||    
T  19791477 at 19791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 24381422 - 24381330
Alignment:
Q  20 ataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactga-aaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||| ||||||  ||||||||||  || |||| ||||||||| |||||| ||||||| |||||||||||||||| || |||||| ||||||    
T  24381422 ataggcaattgttaaaatactcctctgttctgctggtaaaacctgctgaaattgactgaaaaaacatgctaagaataacttaagatgacctgt 24381330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 15058614 - 15058519
Alignment:
Q  6 aatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||||||| |||| ||| || |||| |||||||||| |   |||||   |||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  15058614 aatgtcccgaaatcataagcaattgctctaatactcttatattttggatgtaaaacctactaaaaatgactaaaaaacatgctaagaataacgtaa 15058519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 21316773 - 21316875
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacc 108  Q
    |||||||||| | |||  |||||||||||||||| || |||||||  | | | ||||| ||||  | ||||||||||||||||||| ||||||||| |||    
T  21316773 gtcccaaaattaaaggaaattgttctaatactccgccattttgctgcttagaactactaaaaagaattgaaaaacatgctaagaataacgtaagatgacc 21316872  T
Q  109 tgt 111  Q
    |||    
T  21316873 tgt 21316875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 24908912 - 24908986
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||| ||||||| |||||| || |||| |||||||||| ||||| ||| ||||||||||||||| ||| ||||||    
T  24908912 attgatctaatattcctccattctgcttgtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaa 24908986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 24911133 - 24911207
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||| ||||||| |||||| || |||| |||||||||| ||||| ||| ||||||||||||||| ||| ||||||    
T  24911133 attgatctaatattcctccattctgcttgtaaaacctattgaaattgattgaaaaacatgctaaaaataacgtaa 24911207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 28904080 - 28903979
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcc-tttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||||||||| |||| ||| || ||  ||||||||||||||  |||||| | |||||||||||||||||||| |||  ||||| |||||||| ||||||    
T  28904080 acaaatgtcccgaaatcataagcaatgtttctaatactcctctatttttgat-gtaaaacctactgaaaatgattgatgaacatactaagaataacgtaa 28903982  T
Q  102 gat 104  Q
    |||    
T  28903981 gat 28903979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 13833656 - 13833615
Alignment:
Q  63 tactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  13833656 tactgaaaatgactgaaaaacatgcaaagaataacgtaagat 13833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 24382046 - 24381993
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||| ||||| ||||    
T  24382046 taaaacctactgaaaatgactaaaatacatgctaagaataacgaaagatgacct 24381993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 26829579 - 26829478
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || |||||| ||||||||| ||||| |  ||   |||||| ||||  ||||||||||||||||||||| |||||||    
T  26829579 acaaaagtcccgaaatcataggcaatcgttctattactcctccattttgttgctatttcctactaaaaaatactgaaaaacatgctaagaataacgtaag 26829480  T
Q  103 at 104  Q
    ||    
T  26829479 at 26829478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 5856763 - 5856870
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||  |||  | |||| ||||||| |||||  ||| ||| |||||||||||| ||||||||| ||||| ||||||||||| | |||||    
T  5856763 acaaatgtcccgaaaccataaacaattgatctaatattcctctatttagcttgtaaaacctactaaaaatgact-aaaaatatgctaagaataaggtaag 5856861  T
Q  103 ataacctgt 111  Q
    | |||||||    
T  5856862 aaaacctgt 5856870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 17100287 - 17100211
Alignment:
Q  35 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||| ||||||||||||  ||||||||  ||||||| | ||||||||||||||||||| || | |||| ||||||    
T  17100287 aatacttctcctttttgctgctaaaaccttatgaaaataattgaaaaacatgctaagaataacttgagatgacctgt 17100211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 5151957 - 5152004
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  5151957 aaaaccaactgaaaattactgaaaaacatgttaagaataacgtaagat 5152004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 7985132 - 7985199
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||||||||||  ||||||| |||||||||||| ||  ||||||||| ||||| ||||||| ||||||    
T  7985132 taatactcctctgttttgctggtaaaacctactaaatttgactgaaatacatgttaagaataacgtaa 7985199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 104
Target Start/End: Original strand, 15557405 - 15557452
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||||||||||||||  |||||||| | |||||||    
T  15557405 aaaacctactgaaaatgactgaaaaacagactaagaataatgtaagat 15557452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 24105576 - 24105521
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||||| ||| |||||||||||||||||| || ||||||||| ||||||    
T  24105576 taaatcctactgagaataactgaaaaacatgctaagcataacgtaagatgacctgt 24105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 25227301 - 25227351
Alignment:
Q  61 cctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||| |||||||||| |||||||||| | ||||||| ||||||    
T  25227301 cctactgaaaataactgaaaaacctgctaagaataatgtaagatgacctgt 25227351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 104
Target Start/End: Original strand, 28858867 - 28858920
Alignment:
Q  50 tgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||||||||| |||||||||| |||||||||||||||| | |||||||    
T  28858867 tgcttgtaaaacctactaaaaatgactg-aaaacatgctaagaataatgtaagat 28858920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 12343002 - 12342903
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| || | | |||| ||||||||||||  | |||| | |||||||||||| |||  |||||||||||| | ||||||| |||||||    
T  12343002 acaaatgtcccaaaatcattg-caattgctctaatactcctt-tgtttgttggtaaaacctactaaaatagactgaaaaacaagttaagaataacgtaag 12342905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 37527139 - 37527038
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||  |||||| |||| |||||||||| ||   |||||| |||||||||||| |||  |||||||||| ||| ||| ||| | |||||    
T  37527139 acaaatgtcccgaaaccataggcaattgctctaatactcatctagtttgctggtaaaacctactaaaatagactgaaaaaaatgttaaaaataaggtaag 37527040  T
Q  103 at 104  Q
    ||    
T  37527039 at 37527038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 6286318 - 6286374
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||| ||| |||  |||| ||||||||||||| ||||||||| ||||||    
T  6286318 gtaaaacctactaaaattgatagaaagacatgctaagaataacgtaagatgacctgt 6286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 17650006 - 17650046
Alignment:
Q  64 actgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||| |||||||||||||| ||||||| |||||||||    
T  17650006 actgaaaacgactgaaaaacatgttaagaataacgtaagat 17650046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 24388485 - 24388441
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctt 47  Q
    ||||| |||||||||| |||||| || ||||||||||||||||||    
T  24388485 acaaaagtcccaaaatcataggcaatcgttctaatactcctcctt 24388441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 25180828 - 25180733
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaat-gactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||| |||| |||||| |||| |||||||||||||   ||| || ||||||||||| ||| || |||||||||||||| |||| || |||||||||    
T  25180828 gtcccgaaatcataggcaattgatctaatactcctctggtttcctggtaaaacctac-gaacatagactgaaaaacatgttaaggataacgtaagat 25180733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 25481606 - 25481510
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| || |||||||||||||||| |||||||  ||   |||||| ||| | | || ||| |||||||||||| ||||||||| ||||||    
T  25481606 aaatcataggcaatcgttctaatactcctccattttgctgctatttcctactaaaattaattgtaaagcatgctaagaataacgtaagatgacctgt 25481510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 28275423 - 28275359
Alignment:
Q  7 atgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaa 71  Q
    ||||||| |||| |||||| |||  |||||||||||||  |||| || |||||||||||||||||    
T  28275423 atgtcccgaaatcataggcaattactctaatactcctctgttttcctggtaaaacctactgaaaa 28275359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 5236979 - 5236878
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||||  ||||||||||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  5236979 acaaaagtcccaaaatcataggaaattgttctaatcctcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataacgtaag 5236880  T
Q  103 at 104  Q
    ||    
T  5236879 at 5236878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 10332388 - 10332489
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||||||| || |||| ||||||||||||| ||| | || ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  10332388 acaaatgtcccaaaatgataagcaattgatctaatactcctcttttctacttgtaaaacatactgaaaatgactgaaaaacatgctaagaataacgtaag 10332487  T
Q  103 at 104  Q
    ||    
T  10332488 at 10332489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 26249164 - 26249080
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  26249164 attgttctaatactcatcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctatgaataacgtaagatgacctgt 26249080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 8977571 - 8977482
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| ||||||  ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  8977571 aaatcataggcagttgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaagat 8977482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 9767771 - 9767877
Alignment:
Q  5 aaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||| | |||| |||||| |||| |||||||||||||  |||| || ||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  9767771 aaatgtctcgaaatcataggcaattgatctaatactcctctatttttctggtaaaacctactgaaaatggctgaaaaacatgctaagaataacgtgagat 9767870  T
Q  105 aacctgt 111  Q
     ||||||    
T  9767871 gacctgt 9767877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 18986830 - 18986756
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  18986830 gttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagat 18986756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 19001458 - 19001384
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  19001458 gttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataacgtaagat 19001384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 4450655 - 4450756
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| | |||| || |||||||||||||||| ||||| |  |||||||||||||||||||||| |||||||||||||||| |||||||    
T  4450655 acaaaagtcccgaaatcacaggcaatcgttctaatactcctccattttgttgctaaaacctactgaaaatgactggaaaacatgctaagaataacgtaag 4450754  T
Q  103 at 104  Q
    ||    
T  4450755 at 4450756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 11804694 - 11804783
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||| || ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| || |||| |||||||||    
T  11804694 aaatcataggcaatcgttctaatactgctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgttatgaataacgtaagat 11804783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 23173798 - 23173697
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| || ||||||| |||| | ||||||||||||||||||||||||||   ||||||||| | ||||| ||||||||||||||||||||| |||||||    
T  23173798 acaaaagttccaaaatcatagacaattgttctaatactcctcctttttgcagctaaaacctattaaaaataactgaaaaacatgctaagaataacgtaag 23173699  T
Q  103 at 104  Q
    ||    
T  23173698 at 23173697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 14195732 - 14195840
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||| |||| |||| ||| || | || |||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||| || ||||    
T  14195732 acaaatttcccgaaatcataagcaactgctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacataag 14195831  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  14195832 atcacctgt 14195840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 8052513 - 8052441
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  8052513 ttctaatactcctcatttttgctgctaaaacctactgaaaatgactg-aaaacatgctaagaataacgtaagat 8052441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 10418541 - 10418630
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaaga 92  Q
    |||||||| || |||| |||||| |||| |||||||||||||  ||||||| |||||||||||||||||||||| ||||||||| |||||    
T  10418541 acaaatgttccgaaatcataggcaattgctctaatactcctctgttttgctagtaaaacctactgaaaatgactaaaaaacatgttaaga 10418630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 21502838 - 21502917
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaa 82  Q
    ||||||||||| |||| |||||| ||||||||||||||||||  ||| |||||||||||||||| |||||||| ||||||    
T  21502838 acaaatgtcccgaaatcataggcaattgttctaatactcctctgtttagctcgtaaaacctactaaaaatgaccgaaaaa 21502917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 3585604 - 3585534
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  3585604 taatactcctccattttgctgctaaaacctactgaaaatgattgaaaaacatgctaagaataatgtaagat 3585534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 3173694 - 3173795
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||||| ||  |||||||||||||||  ||| ||  | ||||||| ||||||||||||||||||||||||||||| ||| |||    
T  3173694 acaaaagtcccaaaatcataggcaatctttctaatactcctcccatttactgctgaaacctaatgaaaatgactgaaaaacatgctaagaataacgcaag 3173793  T
Q  103 at 104  Q
    ||    
T  3173794 at 3173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 13280743 - 13280844
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| ||  ||||||||||| | |||||||||  ||||||||||||||| | | ||||||||||||||||||| |||||||    
T  13280743 acaaaagtcccgaaatcataggcaatcattctaatactcgttctttttgctgctaaaacctactgaaattaattgaaaaacatgctaagaataacgtaag 13280842  T
Q  103 at 104  Q
    ||    
T  13280843 at 13280844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 9078968 - 9078893
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactg-aaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||||||||||||||||  | ||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  9078968 gttccaatactcctcctttttgctgctgaaacctactgaaaataactgaaaaaacatgctaagaataacgtaagat 9078893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 144967 - 145060
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||| |||||| |||| |||||||||| ||| ||||||| |||||||||||| |||||||||| |||||||| ||||||| || ||||||    
T  144967 tcccgaaatcataggcaattgctctaatactcatccgttttgctggtaaaacctactaaaaatgactg-aaaacatgttaagaataacataagat 145060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 2565921 - 2565991
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||||||  |   ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  2565921 taatactcctcctttttcttgccaaaacctactgaaaatgactgaaaaacatgctaagaatatcgtaagat 2565991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 3736320 - 3736426
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||| | |||| |||||| |||| ||||||| ||||    |||||| ||||||||||||||||  |||| ||||||||||||||||| |||||||    
T  3736320 acaaatgtctcgaaatcataggcaattgatctaataatcctatgctttgctggtaaaacctactgaaatagactaaaaaacatgctaagaataacgtaag 3736419  T
Q  103 ataacct 109  Q
    || ||||    
T  3736420 atgacct 3736426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 39270358 - 39270296
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaaga 92  Q
    ||||||||||||||||||||| ||  |||||| |||| |||||||||||||||||||||||||    
T  39270358 gttctaatactcctcctttttactgctaaaacttactaaaaatgactgaaaaacatgctaaga 39270296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 6018342 - 6018443
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||| ||||| |||||| |||  |||||||||||||  ||||| | |||||||||||| |||  |||||||||||||||||| ||| || ||||    
T  6018342 acaaatgtcctaaaatcataggcaattaatctaatactcctctgttttgttggtaaaacctactaaaatcgactgaaaaacatgctaaaaataacataag 6018441  T
Q  103 at 104  Q
    ||    
T  6018442 at 6018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 6046511 - 6046612
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||||| ||  ||| ||||||||||||||| |||  || ||| |||||||||||||| ||||||||| ||||||| || ||||    
T  6046511 acaaaagtcccaaaatcataggcaataattcaaatactcctccttttagctgctacaacttactgaaaatgactaaaaaacatgttaagaataacataag 6046610  T
Q  103 at 104  Q
    ||    
T  6046611 at 6046612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 10611697 - 10611798
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||  ||| |||||| || |||||||||||| |||||||||||  ||||||||| | ||||| ||||| ||||||||||||||| ||| |||    
T  10611697 acaaaagtcccgtaatcataggcaatcgttctaatactcatcctttttgctgctaaaacctatttaaaatcactgagaaacatgctaagaataacgcaag 10611796  T
Q  103 at 104  Q
    ||    
T  10611797 at 10611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 18468448 - 18468351
Alignment:
Q  7 atgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||| |||| ||| || |||| |||| |||||||||||| | || ||||||| |||| ||| ||||||||||||||| ||||||| |||||||||    
T  18468448 atgtcccgaaatcataagcaattgatctattactcctcctttcttcttgtaaaacttactaaaattgactgaaaaacatgttaagaataacgtaagat 18468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 23897224 - 23897325
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||  |||| |||||| |||| | |||||||||||  ||||||| ||||||| |||| ||| ||||||||||||||| ||||||| | |||||    
T  23897224 acaaatgtcctgaaatcataggcaattgatataatactcctctgttttgctggtaaaacatactaaaattgactgaaaaacatgttaagaataatgtaag 23897323  T
Q  103 at 104  Q
    ||    
T  23897324 at 23897325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 2927886 - 2927966
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||| ||||||||  |||| |||||| |||   ||||||||||||||||||||| ||||||||| ||||||    
T  2927886 ttctaatactcctcatttttgctactaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgt 2927966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 19201459 - 19201550
Alignment:
Q  20 ataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||| || ||||||||| ||| ||||||||||  |||| |||||||||||| || |||||||||| ||||||| || |||||| ||||||    
T  19201459 ataggcaatcgttctaatagtccacctttttgctgctaaatcctactgaaaataacagaaaaacatgttaagaataacataagatgacctgt 19201550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 23128007 - 23127901
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||| ||||||| ||| || |||| |||||||||||||   |||||| |||||||||||| |||  |||||||| | ||||||| ||| |||||||    
T  23128007 acaaatgttccaaaatcataagcaattgatctaatactcctctgctttgctggtaaaacctactaaaatagactgaaatatatgctaaaaataacgtaag 23127908  T
Q  103 ataacct 109  Q
    || ||||    
T  23127907 atgacct 23127901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 3692829 - 3692760
Alignment:
Q  47 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttatta 116  Q
    ||||||| ||||||||||| |||||||| ||||||| |||||| |||| ||||||||| |||||| ||||    
T  3692829 ttttgctggtaaaacctacagaaaatgaatgaaaaatatgctatgaataacgtaagatgacctgtcatta 3692760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 6039410 - 6039309
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||||| || || | | |||| ||||||| | |||  || |||| |||||| ||||||||||||||||||||||||| ||||||| | |||||    
T  6039410 acaaatgtcccaatatcatcgacaattgctctaatattactctgttatgctggtaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaag 6039311  T
Q  103 at 104  Q
    ||    
T  6039310 at 6039309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 7399324 - 7399412
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||| |||| |||||||||| ||  ||||||| ||||| |||||| |||| ||||| |||||||| ||||||| |||||||||    
T  7399324 aaatgataggcaattgatctaatactcttctgttttgctagtaaaccctactaaaaacgactg-aaaacatgttaagaataacgtaagat 7399412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 9288894 - 9288995
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||| |||| |||||| |||| | |||||||||||||| ||   || | || |||||||||||||||| |||||||||||||||| |||||| | |||||    
T  9288894 acaagtgtcacaaaatcatagacaattgttctaatacttcttggttctactggtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaag 9288993  T
Q  103 at 104  Q
    ||    
T  9288994 at 9288995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 9298686 - 9298787
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||| |||| |||||| |||| | |||||||||||||| ||   || | || |||||||||||||||| |||||||||||||||| |||||| | |||||    
T  9298686 acaagtgtcacaaaatcatagacaattgttctaatacttcttggttctactggtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaag 9298785  T
Q  103 at 104  Q
    ||    
T  9298786 at 9298787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 19154833 - 19154910
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||| |||||  ||||||| || ||||||||||||||   |||||||||||||||||||| ||||||||| ||||||    
T  19154833 taatagtcctctattttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgt 19154910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 20754232 - 20754309
Alignment:
Q  34 taatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||| |||||  ||||||| || ||||||||||||||   |||||||||||||||||||| ||||||||| ||||||    
T  20754232 taatagtcctctattttgctggttaaacctactgaaaaaagctgaaaaacatgctaagaataacgtaagatgacctgt 20754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 21707451 - 21707336
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaa-tactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||||||| | || | |||||| |||||||||| ||||| ||  || | || |||||||||||| ||||||| ||||||| ||||||||||| ||||||    
T  21707451 acaaatgtctcgaactcataggcaattgttctaaatactcttctgttatactggtaaaacctactaaaaatgattgaaaaatatgctaagaataacgtaa 21707352  T
Q  102 gataacctgttattaa 117  Q
    ||| || ||| |||||    
T  21707351 gatgacgtgtcattaa 21707336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 1586175 - 1586272
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgta 100  Q
    ||||||||||  |||| |||| | |||| |||||| ||||||  ||||||| ||| |||||||||  || ||||| |||||||||||||||| |||||    
T  1586175 acaaatgtcctgaaatcatagacaattgctctaatgctcctctattttgctggtataacctactggtaaagactggaaaacatgctaagaataacgta 1586272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 1810940 - 1810989
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||| |||| |||||||||||||||||||||| |||| |||||||||    
T  1810940 gtaaaacttacttaaaatgactgaaaaacatgctacgaataacgtaagat 1810989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 9722477 - 9722526
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| ||||||||||||| ||||||||||||||| ||| |||||||||    
T  9722477 gtaaaatctactgaaaatgattgaaaaacatgctaataataacgtaagat 9722526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 1254754 - 1254708
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  1254754 aaaaccaactgaaaatgactgaaaaacatgctaa-aataacgtaagat 1254708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 21234087 - 21234174
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 90  Q
    |||||||||||| ||| |||| | | |  |||||||||||||  || |||| |||||||||| | |||||||||||| ||||||||||    
T  21234087 acaaatgtcccagaatcatagacaaattctctaatactcctctgttatgctggtaaaacctattaaaaatgactgaataacatgctaa 21234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 19201392 - 19201334
Alignment:
Q  46 tttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||  |||| |||| | ||||| ||||||||||||||||||||| |||||||||    
T  19201392 tttttgctgctaaagcctaataaaaattactgaaaaacatgctaagaataacgtaagat 19201334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 20176131 - 20176168
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  20176131 aaaacatactgaaaatgactggaaaacatgctaagaat 20176168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 1589276 - 1589332
Alignment:
Q  56 taaaacctactgaaaa-tgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||| || ||||||||||||||||||||  | |||||| ||||||    
T  1589276 taaaacctactgaaaaatggctgaaaaacatgctaagaatagcataagatgacctgt 1589332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 2505892 - 2505928
Alignment:
Q  68 aaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  2505892 aaaatgactgaaaaatatgctaagaataacgtaagat 2505928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 13252749 - 13252713
Alignment:
Q  74 actgaaaaacatgctaagaattacgtaagataacctg 110  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  13252749 actgaaaaacatgctaagaataacgtaagatgacctg 13252713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 21663197 - 21663095
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacc 108  Q
    ||||| |||| |||||| || ||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  21663197 gtcccgaaatcataggcaatcgttctaatacttctcctttttgatgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagatgacc 21663098  T
Q  109 tgt 111  Q
    |||    
T  21663097 tgt 21663095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 15542421 - 15542320
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  15542421 acaaaagtcccgaaatcataggcaatcgttctaatactcctactttttgctgctaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaag 15542322  T
Q  103 at 104  Q
    ||    
T  15542321 at 15542320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 27973319 - 27973391
Alignment:
Q  35 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 107  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27973319 aatactcctcctttttgctgttaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaagataac 27973391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 729147 - 729226
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||    
T  729147 gttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaagcatgctaagaataacgtaagatgacct 729226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 22621790 - 22621885
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| |||| |||||| |||||| | |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22621790 aaatcataggcaattgatctaattctcctcttctttgctggtaaa-cctactaaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 22621885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 12210277 - 12210355
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  12210277 ttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaaaacatgctaagaataatgtaagatgacct 12210355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 26647447 - 26647362
Alignment:
Q  26 cattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||| |||||||||||||| ||||| | ||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||    
T  26647447 cattgctctaatactcctccgttttgttggtaaaacctactgaaaaagactgaaaaatatgctaagaataacgtaagatgacctgt 26647362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 18734698 - 18734590
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||| |||||| |||||| || ||||||||||||||||||||||||  |||| |||||| ||    ||||||||||||||||||||| |||||||    
T  18734698 acaaaagtctcaaaatcataggcaatcgttctaatactcctcctttttgctgttaaatcctactaaagtaaactgaaaaacatgctaagaataacgtaag 18734599  T
Q  103 ataacctgt 111  Q
    |||||||||    
T  18734598 ataacctgt 18734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 16363607 - 16363708
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||| || |||| |||||| |||| |||||||||||||  ||||| | |||||| |||||||||||||||| |||||||||||| ||| |||||||    
T  16363607 acaaatgttccgaaatcataggcaattgatctaatactcctctattttgttggtaaaaactactgaaaatgactggaaaacatgctaaaaataacgtaag 16363706  T
Q  103 at 104  Q
    ||    
T  16363707 at 16363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 28009730 - 28009831
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||| | |||| |||||| |||| |||||| |||||||||||||||  |||||| ||  |||||||||||||||||||||||||||| | |||||    
T  28009730 acaaatgtctcgaaattataggcaattgctctaatgctcctcctttttgctgctaaaacttagcgaaaatgactgaaaaacatgctaagaataatgtaag 28009829  T
Q  103 at 104  Q
    ||    
T  28009830 at 28009831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 15158902 - 15158803
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgtt-ctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||| ||||| |||| |||||| ||| || |||||||||||||||||||||  |||| |||||| ||||| ||||||||||||||||||||| ||||||    
T  15158902 acaaaagtcccgaaattataggcaattttttctaatactcctcctttttgctgctaaatcctacttaaaataactgaaaaacatgctaagaataacgtaa 15158803  T

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Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 14782544 - 14782622
Alignment:
Q  33 ctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||| ||||||||||||||  ||||||||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||    
T  14782544 ctaatagtcctcctttttgctgctaaaacctattgaaattgagtgaaaaacatgctaagaataacgtaagatgacctgt 14782622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 18527602 - 18527508
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||| |||||| ||  ||||||||||||||||||||||   ||||||||| ||||||||| ||||||| ||||||||||| |||||||||    
T  18527602 tcccgaaatcataggcaatcattctaatactcctcctttttgccgctaaaacctattgaaaatgagtgaaaaagatgctaagaataacgtaagat 18527508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 14235397 - 14235296
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| ||| || |||| ||||||||||| || || ||   | |||||||||| ||||||||||||||||||||||||| | |||||||    
T  14235397 acaaatgtcccaaaatcataagcaattggtctaatactccaccattctggatgaaaaacctactaaaaatgactgaaaaacatgctaagagtaacgtaag 14235298  T
Q  103 at 104  Q
    ||    
T  14235297 at 14235296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 15571801 - 15571700
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||| ||||| |||| | |||| |||||||||||||   |||||| |||||||||||| ||| ||||||||||||||||||| ||| |||||||    
T  15571801 acaaacgtcctaaaatcatagacaattgatctaatactcctctgctttgctagtaaaacctactaaaattgactgaaaaacatgctaaaaataacgtaag 15571702  T
Q  103 at 104  Q
    ||    
T  15571701 at 15571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 21450758 - 21450859
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    |||| |||| |||||| ||  ||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||  || || |||||| ||||    
T  21450758 tcccgaaatcataggcaatctttccaatactcctcctttttgctgctaaaacctactgaaaatgactgagaaacatgctaaagataacttaagatgacct 21450857  T
Q  110 gt 111  Q
    ||    
T  21450858 gt 21450859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 24901193 - 24901294
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||  |||||||| || |||| ||||||||| |||  ||||||| |||||| ||||||||||||| ||||||| ||||||| ||| |||||||    
T  24901193 acaaatgtcctgaaatgataagcaattgatctaatacttctctgttttgctggtaaaatctactgaaaatgattgaaaaatatgctaaaaataacgtaag 24901292  T
Q  103 at 104  Q
    ||    
T  24901293 at 24901294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 16114784 - 16114892
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| || ||  |||| |||||||||| ||  || |||| ||||||| | |||||||||| ||||||||||||||||||| |||||||    
T  16114784 acaaatgtccctaaatcatgggaaattgctctaatactcatctgttatgctggtaaaacatgctgaaaatgattgaaaaacatgctaagaataacgtaag 16114883  T
Q  103 ataacctgt 111  Q
    |||| ||||    
T  16114884 ataatctgt 16114892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 22426628 - 22426520
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||||||||||||||||||||||||  ||   |||||| |||   ||||||||||||||||||||| |||||||    
T  22426628 acaaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaatgacgtaag 22426529  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  22426528 atgacctgt 22426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 16180702 - 16180792
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    ||||| ||||| |||| |||||| || |||||||||||||||||||||| |  ||||  ||||||||||| |||||||||||||||||||||    
T  16180702 acaaaagtcccgaaatcataggcaat-gttctaatactcctcctttttgttgctaaactctactgaaaataactgaaaaacatgctaagaat 16180792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 22507478 - 22507393
Alignment:
Q  20 ataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagat 104  Q
    |||||| || |||||||||||||||||||||||   ||||||||| ||||||| |||  ||||||||||||||||| |||||||||    
T  22507478 ataggcaatcgttctaatactcctcctttttgccgctaaaacctaatgaaaataactaaaaaaacatgctaagaataacgtaagat 22507393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 27116336 - 27116235
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| |||| | |||  |||||||||| ||| ||||  | |||||||||||| ||||||| ||||||||||| ||||||  |||||||    
T  27116336 acaaatgtcccaaaatcatagacaatttctctaatactcatccgtttttatggtaaaacctactaaaaatgattgaaaaacatgttaagaaaaacgtaag 27116237  T
Q  103 at 104  Q
    ||    
T  27116236 at 27116235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 33192381 - 33192437
Alignment:
Q  48 tttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  33192381 tttgctggtaaaacctactgaaattgactgaaaaacatgctaagaatagcgtaagat 33192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 35133868 - 35133976
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||| |||||||  ||||| |||  | |||||||||||| ||||| | |||||||||||| |||| |||||||||||||||||   || |||||||    
T  35133868 acaaatgttccaaaatcgtaggcaattactttaatactcctccattttgttggtaaaacctactaaaaaagactgaaaaacatgctacagataacgtaag 35133967  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  35133968 atgacctgt 35133976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 12011285 - 12011210
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 90  Q
    |||| |||||| |||| |||||||||| | | ||||||| |||||||||||||||||||  |||||||||||||||    
T  12011285 aaatcataggcaattgctctaatactcattcgttttgctggtaaaacctactgaaaatgtgtgaaaaacatgctaa 12011210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 18832226 - 18832307
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||||||||||||||||||  ||| ||||| | ||| | ||||||||||||||||||||  || |||||| ||||||    
T  18832226 gttctaatactcctcctttttgctgctaagacctaattaaagtaactgaaaaacatgctaagaagaacctaagatgacctgt 18832307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 25402521 - 25402440
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||||||||| ||||||||  |||| |||||| |||   ||||||||||||||||||||| ||| ||||| ||||||    
T  25402521 gttctaatactcctcttttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgcaagatgacctgt 25402440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 18098361 - 18098253
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||| | |||| |||||| |||| |||||||||||||   |||||| |||||||||||| ||   || |||||||||  |||| ||| |||||||    
T  18098361 acaaatgtctcgaaatcataggcaattgatctaatactcctctggtttgctggtaaaacctactaaattagattgaaaaacagtctaaaaataacgtaag 18098262  T
Q  103 ataacctgt 111  Q
    |||||||||    
T  18098261 ataacctgt 18098253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 22626267 - 22626159
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||| ||||||||| |||||  | |  |||||||||||||  ||||||| |||||| ||||| ||||  | | ||||||||||||||||| |||||||    
T  22626267 acaaatttcccaaaatcataggtaaattctctaatactcctctgttttgctggtaaaagctactaaaaaaaattcaaaaacatgctaagaataacgtaag 22626168  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  22626167 atgacctgt 22626159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 26022379 - 26022447
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaa 71  Q
    ||||||||||| |||| ||| || |||| || |||||||| |||||||||| |||||||||||||||||    
T  26022379 acaaatgtcccgaaatcataagcaattgctccaatactccacctttttgctggtaaaacctactgaaaa 26022447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 26611412 - 26611336
Alignment:
Q  35 aatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||||||  |||| |||||| | | | | ||||||||||||||||||| ||||||||| ||||||    
T  26611412 aatactcctcctttttgctgctaaatcctactaatattaattgaaaaacatgctaagaataacgtaagatgacctgt 26611336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 17445050 - 17445141
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    |||||| ||||||||| ||| || |||| |||||| ||| ||  || |||| |||||||||||| ||||| ||||||||||||| |||||||    
T  17445050 acaaatatcccaaaatcataagcaattgatctaatgctcatctattatgcttgtaaaacctactaaaaataactgaaaaacatgttaagaat 17445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 21848634 - 21848712
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagata 105  Q
    |||| |||||||||||||  |||||||  ||| ||||| | |||| |||||||||||||||||||||| || |||||||    
T  21848634 attgctctaatactcctctgttttgctaataacacctattaaaaacgactgaaaaacatgctaagaataacataagata 21848712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 16785713 - 16785613
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||| | | |||||| ||||||||||||||||||| |||| || |||||||| | ||||||| | | || |||||||||| |||  ||||||    
T  16785713 acaaatgtcccata-tcataggcaattgttctaatactcctccgttttactggtaaaacccattgaaaattatttaagaacatgctaaaaatagcgtaag 16785615  T
Q  103 at 104  Q
    ||    
T  16785614 at 16785613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 18827380 - 18827481
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| ||  ||||||||||| |||||| | ||  ||| ||||| | ||||| ||||||||||||| ||||||| |||||||    
T  18827380 acaaaagtcccgaaatcataggcaatcattctaatactcatcctttctcctgctaagacctaattaaaataactgaaaaacatgttaagaataacgtaag 18827479  T
Q  103 at 104  Q
    ||    
T  18827480 at 18827481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 7221563 - 7221611
Alignment:
Q  66 tgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 114  Q
    ||||||||||||||||||||| ||||||| ||||||||| || ||||||    
T  7221563 tgaaaatgactgaaaaacatgttaagaataacgtaagatgacatgttat 7221611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 9403618 - 9403686
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaa 71  Q
    ||||| ||||| |||| |||||| |  |||||||||||||| |||||||||  ||||||||||||||||    
T  9403618 acaaaagtcccgaaatcataggcaaacgttctaatactccttctttttgctgctaaaacctactgaaaa 9403686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 11845281 - 11845233
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  11845281 taaaacctactaaaaataactgaaaaatatgctaagaataacgtaagat 11845233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 15630981 - 15630938
Alignment:
Q  68 aaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||| ||||||||||||||||| || |||||||||||||    
T  15630981 aaaatgactaaaaaacatgctaagaataacataagataacctgt 15630938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 22624606 - 22624701
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||| |||| |||||| ||  || ||||||||||||||||||||  |||| |||||| |||   ||| ||||||||||||||||| | |||||||    
T  22624606 gtcccgaaatcataggcaatcattttaatactcctcctttttgctgctaaatcctactaaaataaacttaaaaacatgctaagaataatgtaagat 22624701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 24464664 - 24464699
Alignment:
Q  69 aaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||||||||||||||| |||||||||    
T  24464664 aaatgactgaaaaacatgctaagaataacgtaagat 24464699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 17543228 - 17543115
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaa--acatgctaagaattacgta 100  Q
    ||||||||||| |||| ||| || |||| | ||||||||||   || ||||  ||||||||| ||||||||||| ||||  ||||||||| ||| |||||    
T  17543228 acaaatgtcccgaaataataagcaattgatttaatactcctatattatgctattaaaacctattgaaaatgactaaaaaagacatgctaaaaataacgta 17543129  T
Q  101 agataacctgttat 114  Q
    |||| || ||||||    
T  17543128 agatgacatgttat 17543115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 9783080 - 9782991
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||| |||| ||||||||| |||   |||||  |||||||||||| |||  || ||||||||||||||| ||| |||||||||    
T  9783080 aaataataggcaattgctctaatacttctctggtttgcaggtaaaacctactaaaatagattgaaaaacatgctaataataacgtaagat 9782991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 25959520 - 25959471
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||| |||||| |||||| |||||||| | |||||||    
T  25959520 gtaaaacctactgaaaaagactgagaaacatcctaagaataatgtaagat 25959471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 26022440 - 26022477
Alignment:
Q  74 actgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  26022440 actgaaaaacatgctaagaataacgtaagatcacctgt 26022477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 16915309 - 16915261
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttg 51  Q
    ||||| || ||||||| |||||| || ||||||||||||||||||||||    
T  16915309 acaaaagttccaaaatcataggcaatcgttctaatactcctcctttttg 16915261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 22624955 - 22624911
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaa 71  Q
    |||| ||||||||||||| || ||||| |||||||||||||||||    
T  22624955 attgctctaatactcctctttgttgctggtaaaacctactgaaaa 22624911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 27912113 - 27912149
Alignment:
Q  68 aaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  27912113 aaaatgactgaaaaacatgttaagaataacgtaagat 27912149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 12616698 - 12616799
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||  ||||||||||||||| |||||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||    
T  12616698 acaaaagtcccgaaatcataggaaattgttctaatactcatcctttttgctgctaaaacctactgaaaaagactgaaaaacatgttaagaattacgtaag 12616797  T
Q  103 at 104  Q
    ||    
T  12616798 at 12616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 17335468 - 17335367
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||| |||||| |||||| || ||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| |||||||    
T  17335468 acaaaagtctcaaaatcataggcaatcgttctaatactcctcctttttgcttctaaaacttactgaaaatgactgaaaaacatgccaagaataacgtaag 17335369  T
Q  103 at 104  Q
    ||    
T  17335368 at 17335367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 7583788 - 7583876
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 103  Q
    |||| |||||| |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  7583788 aaatcataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataacgtaaga 7583876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 15166452 - 15166560
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| | |||| || ||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||    
T  15166452 acaaaagtcccgaaatcacaggcaatcgttctaatactcctcgtttttgctgctaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaag 15166551  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  15166552 atgacctgt 15166560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 25025090 - 25025198
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| |||||| ||||  ||||| |||||   ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  25025090 acaaatgtcccaaaatcataggcaattgcactaatgctcctttgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataacgtaag 25025189  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  25025190 atgacctgt 25025198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 17711288 - 17711381
Alignment:
Q  1 tcacaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    ||||||| ||||| |||| |||||| || ||||||||||||||| |||||||   ||||||||||||||||||||| |||||||||||||||||    
T  17711288 tcacaaaagtcccgaaattataggcaatcgttctaatactcctcatttttgcagctaaaacctactgaaaatgactaaaaaacatgctaagaat 17711381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 18750808 - 18750909
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||||| |||| ||||||||||||||||||||||  |||| |||||||||||| ||||||||| ||||||| ||| | |||||    
T  18750808 acaaaagtcccaaaatcataggcaattgctctaatactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaag 18750907  T
Q  103 at 104  Q
    ||    
T  18750908 at 18750909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 9536868 - 9536768
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| || ||||||| |||||  |||||| ||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||| || ||||    
T  9536868 acaaaagttccaaaatcataggtaattgttgtaatactcctcctttttgctgctaaaacctactgaaaataattgaaaaacatgctaagaataacataag 9536769  T
Q  103 a 103  Q
    |    
T  9536768 a 9536768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 10106285 - 10106380
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||| |||| |||| | |||||| |||||||||||||||||||   |||||||||||||||||||| |||||||||||||||||| | |||||||    
T  10106285 gtcccgaaatcatagacaattgttgtaatactcctcctttttgcagctaaaacctactgaaaatgacagaaaaacatgctaagaataatgtaagat 10106380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 9263463 - 9263357
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||| |||||||| |||| | ||||||||||||||||||  || ||||  ||||||||| ||||  ||||||||||||||||||| ||| |||||||    
T  9263463 acaaatgacccaaaattatagacaattgttctaatactcctcagttctgctgataaaacctattgaatttgactgaaaaacatgctaaaaataacgtaag 9263364  T
Q  103 ataacct 109  Q
    |||||||    
T  9263363 ataacct 9263357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 19883625 - 19883524
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| |||| | |||||||||||||||| |   |||| | ||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  19883625 acaaatgtcccgaaatcatagacaattgttctaatactcccctgctttgttggtaaaacctactgaaaatgatcgaaaaacatactaagaattacgtaag 19883526  T
Q  103 at 104  Q
    ||    
T  19883525 at 19883524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 9849808 - 9849712
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| |||| ||||||||||||   ||||| | |||||||||||| |||||||||||||||||| |||||||| ||||||||| ||||||    
T  9849808 aaatcataggcaattgatctaatactcctttgttttgttggtaaaacctactaaaaatgactgaaaaacatactaagaataacgtaagatgacctgt 9849712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 20828252 - 20828152
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| |||||| |||||| ||||||||||   |||||||  ||| ||||| |||||| |||||||||| ||||||||||| |||||||    
T  20828252 acaaatgtcccaaaatcataggcaattgttgtaatactcctttattttgctgctaatacctattgaaaaagactgaaaaagatgctaagaataacgtaag 20828153  T
Q  103 a 103  Q
    |    
T  20828152 a 20828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 17218513 - 17218618
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||  |||||| || ||||||||||||||||||||||||   ||||| |||||||  ||||||||||||||||||||||| |||||||    
T  17218513 acaaaagtcccgaaaacataggcaatcgttctaatactcctcctttttgcttcgaaaacttactgaat-tgactgaaaaacatgctaagaataacgtaag 17218611  T
Q  103 ataacct 109  Q
    || ||||    
T  17218612 atgacct 17218618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 17434418 - 17434526
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| ||| || |||| |||||||||||||  ||  ||   ||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  17434418 acaaatgtcccgaaatcataagcaattgatctaatactcctctattccgcaattaaaacctactgaaaatgacttaaaaacatgctaaaaataacgtaag 17434517  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  17434518 atgacctgt 17434526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 19556652 - 19556546
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| || ||||||| |||||| || ||||||||||||| |||| ||| |  ||||||||| |||||||||||||||| |||||||||||| |||||||    
T  19556652 acaaaagttccaaaatcataggcaatcgttctaatactcc-ccttattggtgctaaaacctattgaaaatgactgaaaa-catgctaagaataacgtaag 19556555  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  19556554 atgacctgt 19556546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 22171760 - 22171840
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||||||||||  ||||||||| |||||||  | |||||||||||||||||| | ||||||| ||||||    
T  22171760 ttctaatactcctcctttttgctgctaaaacctaatgaaaatagcagaaaaacatgctaagaataatgtaagatgacctgt 22171840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 8968142 - 8968083
Alignment:
Q  45 ctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  8968142 ctttttgctgctaaaacctacttaaaatgactgaaaaacatgctaagaataacgtaagat 8968083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 9054013 - 9054090
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||||||| ||  || |||| ||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  9054013 attgatctaatactcatctattctgcttgtaaaacctactgaaaatgactgcaaaacatgctaagattaacgtaagat 9054090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 11512139 - 11512038
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||  |||| |||| | ||| |||||||||||||   ||||||| ||||||||||||| || ||||||||||||||| ||||||| || ||||    
T  11512139 acaaatgtcctgaaatcatagacaattattctaatactcctttgttttgcttgtaaaacctactgcaattgactgaaaaacatgataagaataacataag 11512040  T
Q  103 at 104  Q
    ||    
T  11512039 at 11512038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 12836159 - 12836082
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||||||   |||| || ||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  12836159 attgttctaatactcctttattttccttgtaaaatatactaaaaatgactgaaaaacatgctaagaataacgtaagat 12836082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 14573457 - 14573533
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||||||||||  ||||||| |||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  14573457 attgctctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagat 14573533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 16928936 - 16928993
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgct 88  Q
    |||||||||||||| |||||||   |||||||||||||||||||||||||||||||||    
T  16928936 ttctaatactcctcatttttgccgctaaaacctactgaaaatgactgaaaaacatgct 16928993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 22350353 - 22350252
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| ||||||||| | |||| |||||||||| ||   |||||| |||||||||||| |||   ||||||||||||||||||||| | |||||    
T  22350353 acaaatgtcccgaaatgatagacaattgatctaatactcttctggtttgctggtaaaacctactaaaataaactgaaaaacatgctaagaataatgtaag 22350254  T
Q  103 at 104  Q
    ||    
T  22350253 at 22350252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 11782503 - 11782582
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacct 109  Q
    |||||||||||| | |||||||||   |||||||||| ||||||||| ||||||||| ||||||| ||||||||| ||||    
T  11782503 gttctaatactcttactttttgctgtaaaaacctacttaaaatgactaaaaaacatgttaagaataacgtaagatgacct 11782582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 16669787 - 16669731
Alignment:
Q  50 tgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataa 106  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  16669787 tgcttgtaaaacctactgaaattgattgaaaaacatgctaagaataacgtcagataa 16669731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 10236573 - 10236652
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaa 82  Q
    |||||||| || |||| |||||| |||| || ||||||| || | |||||| |||||||||||||||| |||||||||||    
T  10236573 acaaatgtaccgaaatcataggcaattgatcaaatactcttcttctttgctggtaaaacctactgaaattgactgaaaaa 10236652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 13588744 - 13588793
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| ||||||||||||| ||||||||||||||| ||| |||||||||    
T  13588744 gtaaaatctactgaaaatgattgaaaaacatgctaataataacgtaagat 13588793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 15047804 - 15047849
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||    
T  15047804 taaaacctactgaaattgactgaaaaacatgccaagaataacgtaa 15047849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 15106620 - 15106575
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||    
T  15106620 taaaacctactgaaattgactgaaaaacatgccaagaataacgtaa 15106575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 17108714 - 17108771
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaat 72  Q
    |||| |||||| ||| ||||||||||| |||||||||||  |||||||||||||||||    
T  17108714 aaatcataggcaatttttctaatactcatcctttttgctgttaaaacctactgaaaat 17108771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 19603946 - 19603901
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaat 72  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||    
T  19603946 attgctctaatactcctcctttttgctactaaaacctactgaaaat 19603901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 11252242 - 11252134
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||||||||||||||  |||||  |  |||| |||||| |||   ||||||||||||||||| ||| |||||||    
T  11252242 acaaaagtcccgaaatcataggcaatcgttctaatactcctttttttttttgctaaatcctactaaaataaactgaaaaacatgctaaaaataacgtaag 11252143  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  11252142 atgacctgt 11252134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 17277874 - 17277930
Alignment:
Q  48 tttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||| ||||||| |||| |||  |||||||||||||||||||||| |||||||||    
T  17277874 tttgctggtaaaacttactaaaatagactgaaaaacatgctaagaataacgtaagat 17277930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 10432189 - 10432246
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgc 87  Q
    ||||||||||||||| ||||||||  | ||||||| | ||||| ||||||||||||||    
T  10432189 gttctaatactcctcatttttgctgctgaaacctaattaaaataactgaaaaacatgc 10432246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 20860323 - 20860431
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||||| |||||||||||||| ||||||||||||  ||||||||||||||||| | ||||||||||||||| | | |||||||    
T  20860323 acaaaagtcccaaaatcataggcaattgttctaatacttctcctttttgctgctaaaacctactgaaaattaatgaaaaacatgctaacagtaacgtaag 20860422  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  20860423 atgacctgt 20860431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 17469671 - 17469570
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||| ||| ||||||| |||||| |||| |||||||||||||  ||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  17469671 acaactgttccaaaatcataggcaattgctctaatactcctctgttttgctggtaaaacctgctgaaaatgattgaaaaacatgctaagaataacgtaag 17469572  T
Q  103 at 104  Q
    ||    
T  17469571 at 17469570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 23387648 - 23387560
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 103  Q
    |||| |||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| || |||||    
T  23387648 aaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataaga 23387560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 19053085 - 19053183
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||| ||||| |||| |||||| |||||||||||||||||||||||||||   |||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  19053085 acaaaagtcccgaaattataggcaattgttctaatactcctcctttttgctgtaaaaatctactgaaaataactgataaacatgctaagaataacgtaa 19053183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 19003854 - 19003777
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  19003854 attgttctaatactcatcctttttgctgctaaaacctactgaaaataactgaaaaacatgccaagaataacgtaagat 19003777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 24162112 - 24162016
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| ||| |||||||||| |||| ||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||| || ||||||    
T  24162112 aaatcataggcaattattctaatacttctccattttgctggtaaaatctattgaaaatgactgaaaaacatgctaagaataacgtaaaatgacctgt 24162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 26122366 - 26122474
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| |||| | |||| |||||||||||||  ||||||| |||||||||||| |||| |||| ||||||||||||||||| |  ||||    
T  26122366 acaaatgtcccgaaatcatagacaattgctctaatactcctctgttttgctggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 26122465  T
Q  103 ataacctgt 111  Q
    |||||||||    
T  26122466 ataacctgt 26122474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 28666476 - 28666587
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| ||||||  |  |||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||| ||||||| || ||||    
T  28666476 acaaaagtcccaaaatcataggcagtcattctaatacttctcctttttgctgctaaaacctactgaaaatgaatgaaaaacatgataagaataacataag 28666575  T
Q  103 ataacctgttat 114  Q
    || | |||||||    
T  28666576 atgatctgttat 28666587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 34488841 - 34488948
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||| |||| |||| || ||| |||| |||||||||| ||  ||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  34488841 acaaatttccctaaatcattggcaattgatctaatactcatctgttttgctggtaaatcctactaaaaatgactgaaaaacatgctaagaataacgtaag 34488940  T
Q  103 ataacctg 110  Q
    || |||||    
T  34488941 atgacctg 34488948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 25920815 - 25920916
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||| |||||| |||| |||||| |||| |||||||||| ||| ||||||| ||||| |||||||||||||||  ||||| ||||||||||| |||||||    
T  25920815 acaattgtcccgaaatcataggcaattgctctaatactcatccgttttgctggtaaatcctactgaaaatgacaaaaaaatatgctaagaataacgtaag 25920914  T
Q  103 at 104  Q
    ||    
T  25920915 at 25920916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 26069257 - 26069350
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttattaaaat 120  Q
    ||||||||||||||||||  || |||| |||||| ||||||||||||||| ||||||||| ||||||| |||||||||||| ||| || |||||    
T  26069257 attgttctaatactcctctgttctgctggtaaaatctactgaaaatgactaaaaaacatgttaagaataacgtaagataacttgtcatcaaaat 26069350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 25400824 - 25400753
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||||||| ||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  25400824 gttctaatattcctcctttttcctgctaaaacctaatgaaaatgactgaaaaacatgctaagaataacgtaa 25400753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 29987940 - 29988059
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctccttttt-gctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||| ||||| |||| ||| || || ||||||||||||| ||||||| |||  ||||| ||||| ||||||||||||||||||||||| ||| ||||||    
T  29987940 acaaaagtcccgaaatcatatgcaatcgttctaatactccaccttttttgctgctaaaatctactaaaaatgactgaaaaacatgctaaaaataacgtaa 29988039  T
Q  102 gataacctgttattaaaatc 121  Q
    ||| |||||| || ||||||    
T  29988040 gatgacctgtcatcaaaatc 29988059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 18832206 - 18832312
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| |||| | |||| |||||||||||||  ||||| | |||||||||| |||||| |||||||||||||||||| ||| | |||||    
T  18832206 acaaatgtcccgaaatcatagacaattgctctaatactcctctgttttgttggtaaaacctattgaaaaagactgaaaaacatgctaaaaataatgtaag 18832305  T
Q  103 ataacct 109  Q
    || ||||    
T  18832306 atgacct 18832312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 22797521 - 22797420
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 114  Q
    |||| |||||| || | ||||||||| ||||||||||||  |||||||||  ||||||||||||||||||||| || ||| ||||||||| |||||| ||    
T  22797521 aaatcataggcaatcgctctaatacttctcctttttgctaataaaacctatcgaaaatgactgaaaaacatgcgaataataacgtaagatgacctgtcat 22797422  T
Q  115 ta 116  Q
    ||    
T  22797421 ta 22797420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 34132070 - 34132171
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| ||||||  | ||||||||||| ||||||||||||  ||||||||| |||||||  |||||||||||||||||||| | |||||    
T  34132070 acaaaagtcccgaaatcataggcagtcgttctaatacttctcctttttgctgctaaaacctaatgaaaatagctgaaaaacatgctaagaataaagtaag 34132169  T
Q  103 at 104  Q
    ||    
T  34132170 at 34132171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 24263863 - 24263748
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| |||||  |||| | ||||| |||||   |||| | |||||||||||| |||  |||||||||||||||||||||| |||||||    
T  24263863 acaaatgtcccaaaatcataggaaattgatataataatcctctgatttgttggtaaaacctactaaaatagactgaaaaacatgctaagaataacgtaag 24263764  T
Q  103 ataacctgttattaaa 118  Q
    || |||| | ||||||    
T  24263763 atgacctatcattaaa 24263748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 31600188 - 31600088
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| |||| | |||  |||||||||| ||  ||||| | ||||||||||| ||||| |||| ||||||||||||||||| |||||||    
T  31600188 acaaatgtcccgaaatcatagacaattactctaatactcttctgttttgttggtaaaacctacggaaaaagacttaaaaacatgctaagaataacgtaag 31600089  T
Q  103 a 103  Q
    |    
T  31600088 a 31600088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 24320605 - 24320526
Alignment:
Q  33 ctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||| ||||||||||  ||||||||||||||||||| |  ||||||||| ||||||| ||||||||| ||||||    
T  24320605 ctaatactccgcctttttgctgctaaaacctactgaaaatgaataaaaaaacatgttaagaataacgtaagatgacctgt 24320526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 23214932 - 23214830
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacc 108  Q
    ||||| |||| |||||| |||  ||| |||||||||||||||| |  ||||   || ||||||| ||||||||||||||||||||| ||||||||| |||    
T  23214932 gtcccgaaatcataggcaatttctctcatactcctcctttttgttgctaaactgtattgaaaataactgaaaaacatgctaagaataacgtaagatgacc 23214833  T
Q  109 tgt 111  Q
    |||    
T  23214832 tgt 23214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 19761639 - 19761586
Alignment:
Q  58 aaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||    
T  19761639 aaacctactgaaaatgactgaataacatgctaataataacgtaagatgacctgt 19761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 15691305 - 15691353
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  15691305 taaaacctactgaaaatgactaaaaaatatgctaagaataacgtaagat 15691353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 18939504 - 18939612
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| ||| || |||  |||||||||| |   ||||||| ||||||| |||| || | |||||||||||||| ||||||| |||||||    
T  18939504 acaaatgtcccgaaatcatatgcaattactctaatactcatatgttttgctggtaaaacttacttaataagactgaaaaacatgttaagaataacgtaag 18939603  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  18939604 atgacctgt 18939612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 23110280 - 23110208
Alignment:
Q  32 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||  |||||||  |||||||||| || ||||||| ||||||||| ||||||| |||||||||    
T  23110280 tctaatactcctctgttttgctgttaaaacctaccgataatgactaaaaaacatgttaagaataacgtaagat 23110208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 23338888 - 23338983
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| || ||||||||| || | |||||| ||  ||||||||| ||||||||| ||||||||||||||||||| || |||||| ||||||    
T  23338888 aaatcataggcaatcgttctaata-tcttgcttttttctgctaaaacctaatgaaaatgattgaaaaacatgctaagaataacctaagatgacctgt 23338983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 25572538 - 25572494
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgta 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  25572538 taaaacctactgaaattgactgaaaaacatgctaagaataacgta 25572494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 26348426 - 26348534
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||| || |||| ||| || | |||| |||||||||||  || || | |||||| |||||| ||||||||||||||||| |||||||| ||||||     
T  26348426 acaaatgttccgaaatcataagcaaatgttataatactcctctgttctgttggtaaaatctactggaaatgactgaaaaacatactaagaataacgtaaa 26348525  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  26348526 atgacctgt 26348534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 24658383 - 24658332
Alignment:
Q  33 ctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaaca 84  Q
    |||||||||||||||||||||  ||||||||||| ||||||| |||||||||    
T  24658383 ctaatactcctcctttttgctgctaaaacctactaaaaatgattgaaaaaca 24658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 26117427 - 26117522
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||| |||| ||| || |||||||||| |||| ||  || |||| ||||||||| |||||||||| | ||||||||||||||||| | |||||||    
T  26117427 gtcccgaaatcataagcaattgttctaaaactcatctcttctgcttgtaaaacctgctgaaaatgattaaaaaacatgctaagaataatgtaagat 26117522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 23266852 - 23266908
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||||||||| |||||||||| || ||| | ||||||| ||||||    
T  23266852 gtaaaacctactgaaaatgactaaaaaacatgccaaaaataatgtaagatgacctgt 23266908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 28254877 - 28254973
Alignment:
Q  5 aaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||||||||||||| ||| |  |||| | ||||||||| | ||||||   | |||| ||||||||||||||||||||| ||| ||||||| ||||||    
T  28254877 aaatgtcccaaaatcataagtaattgctataatactccacttttttggatgaaaaaactactgaaaatgactgaaaaatatgttaagaataacgtaa 28254973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 22845906 - 22845807
Alignment:
Q  5 aaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||| ||||| |||||| |||| |||||||| |||   ||||||| ||||||||||||  || | ||| | ||||||||||||||| || ||||||    
T  22845906 aaatgtccaaaaatcataggcaattgatctaatacacctatgttttgctggtaaaacctactataattaactaacaaacatgctaagaataacataagat 22845807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 16522015 - 16521966
Alignment:
Q  4 caaatgtcccaaaatgataggccattgttctaatactcctcctttttgct 53  Q
    |||| |||||||||| |||||| || |||||||||||||||| |||||||    
T  16522015 caaaagtcccaaaatcataggcaatcgttctaatactcctccattttgct 16521966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 24513238 - 24513201
Alignment:
Q  74 actgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  24513238 actgaaaaacatgctaagaataacgtaagatgacctgt 24513201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 17831739 - 17831778
Alignment:
Q  64 actgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  17831739 actgaaaatg-ctgaaaaacatgctaagaataacgtaagat 17831778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 24513299 - 24513231
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaa 71  Q
    |||||||||||||||| |||||| | |  ||||||||||||| ||||||||  | ||| ||||||||||    
T  24513299 acaaatgtcccaaaatcataggcaaattctctaatactcctcttttttgctgctgaaatctactgaaaa 24513231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 23010156 - 23010040
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||||||||   ||||  ||| |||||||||||| | ||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  23010156 acaaatgtcccaaaatcggaggcagttgatctaatactccttcgttttgctggtaaaacctattgaaaatgactgaaaaacatgctaagaataacgtaag 23010057  T
Q  103 ataacctgttattaaaa 119  Q
    || || |||||| ||||    
T  23010056 atgacttgttatcaaaa 23010040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 17891715 - 17891816
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||||| |||| |||||  |||  |||||||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||    
T  17891715 acaaatgtcccgaaatcataggaaattactctaatactcctctgttttgctggtaaaacctactgaaaatgactgaaaaacatgttaagaataacgtaag 17891814  T
Q  103 at 104  Q
    ||    
T  17891815 at 17891816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 28918189 - 28918270
Alignment:
Q  20 ataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28918189 ataggcaattgttctaatactcctcctttttgtagctaaaacctactgaaaatgactgaaaaacatgctaagaataacgtaa 28918270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 18758285 - 18758387
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||||||||||||||||||||||||  ||||||||||||||||| | | ||||||||||||| ||| |||||||    
T  18758285 acaaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctactaaaacctactgaaaataattaaaaaacatgctaaaaataacgtaag 18758384  T
Q  103 ata 105  Q
    |||    
T  18758385 ata 18758387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 35680189 - 35680112
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  35680189 attgctctaatactcctctgttttgctggtaaaacctactgaaaatgacttaaaaacatgctaagaataacgtaagat 35680112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 16157195 - 16157089
Alignment:
Q  5 aaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||| ||| || ||||||||||||||||||   | ||   | |||||||||||||||||||||||||||||||||||||| | |||||||    
T  16157195 aaatgtcccaaaatcataagcaattgttctaatactcctctagtgtggatgaaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaagat 16157096  T
Q  105 aacctgt 111  Q
     ||||||    
T  16157095 gacctgt 16157089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 34574497 - 34574606
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgact-gaaaaacatgctaagaattacgtaa 101  Q
    ||||| |||||||||| ||||||  | ||||||||||||||||| ||| ||  ||||||||||||||||| |||  ||||||||||||||||| ||||||    
T  34574497 acaaaagtcccaaaatcataggcattcgttctaatactcctcctattttctattaaaacctactgaaaataactaaaaaaacatgctaagaataacgtaa 34574596  T
Q  102 gataacctgt 111  Q
    ||| ||||||    
T  34574597 gatgacctgt 34574606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 21905738 - 21905818
Alignment:
Q  31 ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||||||| ||  |||||| ||| |||||||||||||||||||||||||||| || |||||| ||||||    
T  21905738 ttctaatactcctcctttttcctgctaaaacatacagaaaatgactgaaaaacatgctaagaataacataagatgacctgt 21905818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 27907635 - 27907544
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    ||||| ||||| |||| |||||| || ||| ||||||| |||||||||| |  |||||| ||||||||||||||||||||||||||||||||    
T  27907635 acaaaagtcccgaaatcataggcaatagttttaatacttctcctttttgttgctaaaacttactgaaaatgactgaaaaacatgctaagaat 27907544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 17350986 - 17351063
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||||||||||||||||| |||||| |  ||||||||||||||||| ||||||||| ||| ||||||| |||||||||    
T  17350986 attgttctaatactcctcatttttgttgctaaaacctactgaaaataactgaaaaatatgttaagaataacgtaagat 17351063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 26313162 - 26313263
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| || ||||||| |||||| || |||||||||||| | |||||||||  ||||||||||||||| ||| | ||||||||||||||||| | |||||    
T  26313162 acaaaagttccaaaattataggcgatcgttctaatactcattctttttgctgctaaaacctactgaaattgattaaaaaacatgctaagaataatgtaag 26313261  T
Q  103 at 104  Q
    ||    
T  26313262 at 26313263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 28930258 - 28930367
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactg-aaaaacatgctaagaattacgtaa 101  Q
    ||||| ||||| |||| |||||| |||||||||||| ||||| |||||||   |||||| ||||||||||||||| |||||||||||||  || ||||||    
T  28930258 acaaaagtcccgaaatcataggcaattgttctaatattcctcatttttgcagctaaaacatactgaaaatgactgaaaaaacatgctaaacataacgtaa 28930357  T
Q  102 gataacctgt 111  Q
    ||| ||||||    
T  28930358 gattacctgt 28930367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 29144618 - 29144727
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcg-taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||| |||||||||| |||||  ||  |||||||| |||||||||||||| | ||||||||| ||  ||||||| ||||||||||||||||| ||||||    
T  29144618 acaaaagtcccaaaatcataggaaatcattctaatattcctcctttttgcttgctaaaacctattggtaatgactaaaaaacatgctaagaataacgtaa 29144717  T
Q  102 gataacctgt 111  Q
    ||| ||||||    
T  29144718 gatgacctgt 29144727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 24086407 - 24086311
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| || ||||||||||||||||||||||||  |||| |||||| |||   ||||||||||||||||||||| ||||||| | ||||||    
T  24086407 aaatcataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataacgtaagttgacctgt 24086311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 22569038 - 22569144
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| || ||||||| |||||  || ||||||||||| ||| ||||| ||  ||||||||||||||| ||||||||||||||| ||||||| || ||||    
T  22569038 acaaaagtaccaaaatcataggtaatcgttctaatacttctcattttttctgctaaaacctactgaaattgactgaaaaacatggtaagaataacataag 22569137  T
Q  103 ataacct 109  Q
    || ||||    
T  22569138 atgacct 22569144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 25886304 - 25886196
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||| | || |||||||||||| ||||||||  |  ||||||||| |||||||||| |||||||||| ||| ||| |||||||    
T  25886304 acaaaagtcccgaaatcatagacaatcgttctaatactcttccttttttatgctaaaacctaatgaaaatgacagaaaaacatgataaaaataacgtaag 25886205  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  25886204 atgacctgt 25886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 22627368 - 22627455
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaa 90  Q
    ||||||| ||| |||| |||| | |||  ||||||||||||   ||||||| |||||||||||||||||||||| |||||||||||||    
T  22627368 acaaatgcccctaaatcatagacaatttctctaatactcctatattttgctggtaaaacctactgaaaatgactaaaaaacatgctaa 22627455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 16257873 - 16257952
Alignment:
Q  32 tctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||| |||  ||||||| |||||| ||||| |||| |||||||||||||| ||||||| || |||||| ||||||    
T  16257873 tctaatacttctcggttttgctggtaaaatctactaaaaacgactgaaaaacatgttaagaataacataagatgacctgt 16257952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 18553274 - 18553381
Alignment:
Q  4 caaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 103  Q
    ||||||| || ||||||||||| |||| |||||||||||||  |||| || |||||||||| | |||  |  |||||||||||||| |||| | ||||||    
T  18553274 caaatgttccgaaatgataggcaattgatctaatactcctctgttttactggtaaaacctattaaaataggttgaaaaacatgctaggaataatgtaaga 18553373  T
Q  104 taacctgt 111  Q
    | ||||||    
T  18553374 tgacctgt 18553381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 27540351 - 27540280
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    ||||||||| ||||| |||||  |  ||||||||||||||||||||||||||| ||||||||| | ||||||    
T  27540351 gttctaatattcctcattttttatgctaaaacctactgaaaatgactgaaaaatatgctaagagtaacgtaa 27540280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 25882639 - 25882582
Alignment:
Q  47 ttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||||| | |||||||||| ||| ||||||||||||||||||| ||| |||||||||    
T  25882639 ttttgctggcaaaacctactaaaattgactgaaaaacatgctaaaaataacgtaagat 25882582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 18545257 - 18545345
Alignment:
Q  4 caaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaaga 92  Q
    |||||||||| |||| |||||| |||| ||||||||||||    ||| || |||||||||| | |||  ||||||||||||||||||||    
T  18545257 caaatgtcccgaaatcataggcaattgatctaatactcctatgatttactagtaaaacctatttaaatagactgaaaaacatgctaaga 18545345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 20379270 - 20379378
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||| | || ||||||||||||||||||||||||| ||   |||||| |||   |||||||||||| |||||||| || | ||    
T  20379270 acaaaagtcccgaaatcatagacaatcgttctaatactcctcctttttgctcctatttcctactaaaataaactgaaaaacatcctaagaataacattag 20379369  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  20379370 atgacctgt 20379378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 25537552 - 25537648
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||| |||||| || | ||||||||||||||||||| ||  ||   |||||| |||   ||||||||||||||||||||| ||||||||| ||||||    
T  25537552 aaatcataggcaatcgctctaatactcctcctttttactgttatttcctactaaaataaactgaaaaacatgctaagaataacgtaagatgacctgt 25537648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 32130760 - 32130704
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||| |||| ||||||||||| |||||| |||||||| ||||||||| ||||||    
T  32130760 gtaaaacttactaaaaatgactgataaacatactaagaataacgtaagatgacctgt 32130704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 32137973 - 32137917
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||| ||||||||||| ||||||  ||||||| ||||||||| ||||||    
T  32137973 gtaaaacctactaaaaatgactgataaacataataagaataacgtaagatgacctgt 32137917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 32139395 - 32139339
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    ||||||||| || ||||||||||| |||||| |||||||| ||||||||| ||||||    
T  32139395 gtaaaacctgctaaaaatgactgataaacatactaagaataacgtaagatgacctgt 32139339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 29717419 - 29717368
Alignment:
Q  55 gtaaaacctactgaaaa-tgactgaaaaacatgctaagaattacgtaagata 105  Q
    ||||||||||||||||| ||| ||||||||||||||||||| || |||||||    
T  29717419 gtaaaacctactgaaaaatgattgaaaaacatgctaagaataacctaagata 29717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 18458478 - 18458369
Alignment:
Q  3 acaaatgtcccaaaatgataggccattg-ttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaa 101  Q
    |||||||||| ||||| |||||| |||  ||||||||||||||   |||||| |||||| ||||| |||  |||||||||||||| ||| ||| || ||     
T  18458478 acaaatgtcctaaaatcataggcgatttcttctaatactcctctggtttgctagtaaaaactactaaaatagactgaaaaacatgttaataataacttat 18458379  T
Q  102 gataacctgt 111  Q
    ||| ||||||    
T  18458378 gatgacctgt 18458369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 25196595 - 25196696
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| |||||| || ||| ||||||| ||| ||||||||  |||| |||||| |||   ||||||||||||| ||||||| || ||||    
T  25196595 acaaaagtcccgaaatcataggcaatcgttttaatacttctcttttttgctgctaaatcctactaaaataaactgaaaaacatgttaagaataacataag 25196694  T
Q  103 at 104  Q
    ||    
T  25196695 at 25196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 26651750 - 26651649
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||||||| | |||| ||| || |||| |||||||||| ||  || | || || ||||||||||||||||||| ||||||||| ||| ||| | |||||    
T  26651750 acaaatgtctcgaaatcataagcaattgctctaatactcatctattctacttgtgaaacctactgaaaatgactcaaaaacatgttaaaaataatgtaag 26651651  T
Q  103 at 104  Q
    ||    
T  26651650 at 26651649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 4820 - 4908
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaaga 103  Q
    |||| |||||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| || |||||    
T  4820 aaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataacataaga 4908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 88549 - 88448
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||||||||||| |||| | |||| ||||| |||||||  ||||  | |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  88549 acaaatgtcccaaaatcatagacaattgctctaagactcctctatttttttggtaaaacctactgaaaatgattgaaaaacatgctaagaataacgtaag 88450  T
Q  103 at 104  Q
    ||    
T  88449 at 88448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 5714 - 5820
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| |||||||||| |||| | |||||||||||||||||||||||||||  |||| |||||| ||||| ||||||||||||| ||| ||| ||| |||    
T  5714 acaaaagtcccaaaatcatagacaattgttctaatactcctcctttttgcttctaaatcctactaaaaataactgaaaaacatgttaaaaataacgaaag 5813  T
Q  103 ataacct 109  Q
    || ||||    
T  5814 atgacct 5820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 10182 - 10105
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||||||||||  ||||||| ||||||||||||||||||||||||||| |||||||| |||  ||||||||    
T  10182 attgatctaatactcctctgttttgctagtaaaacctactgaaaatgactgaaaagcatgctaataatagcgtaagat 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 41335 - 41414
Alignment:
Q  15 aaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    |||| |||||| |||| |||||||||||||  ||||||| |||||||||||| ||||| |||||||||||||||||||||    
T  41335 aaatcataggcaattgatctaatactcctctgttttgctggtaaaacctactaaaaataactgaaaaacatgctaagaat 41414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 4983 - 4884
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    |||||||| ||||||| ||  || |||| |||||||||||||   |||||| |||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  4983 acaaatgttccaaaatcat--gcaattgatctaatactcctctactttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataacgtaag 4886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 6464 - 6541
Alignment:
Q  30 gttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 107  Q
    ||||||||||||||| |||||| |  |||| |||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  6464 gttctaatactcctcatttttgttgctaaatcctattgaaaataactgaaaaacatgctaagaataacgtaagataac 6541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 92925 - 92837
Alignment:
Q  19 gataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 107  Q
    ||||||| || | ||||||| ||||| ||||||||  |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  92925 gataggcaatggctctaatattcctcttttttgctgctaaaccctactaaaaataactgaaaaacatgctaagaataacgtaagataac 92837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 21424 - 21525
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| ||| || ||||||||| ||||| |||||||||||  ||||||||||||||| | ||||||||||||  |||||||  ||||||    
T  21424 acaaaagtcccgaaatcataagcaattgttctactactcatcctttttgctgctaaaacctactgaaattaactgaaaaacatcgtaagaatatcgtaag 21523  T
Q  103 at 104  Q
    ||    
T  21524 at 21525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 243919 - 243843
Alignment:
Q  27 attgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    |||| |||||||||||||  ||||||| |||||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  243919 attgctctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataacgtaagat 243843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 192106 - 192214
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaag 102  Q
    ||||| ||||| |||| ||| || || | ||||| |||||| | |||||||  ||||||||| |||||||||||||||| |||||||| ||| |||||||    
T  192106 acaaaagtcccgaaatcataagcaatcgctctaacactccttcattttgctgctaaaacctattgaaaatgactgaaaaccatgctaaaaataacgtaag 192205  T
Q  103 ataacctgt 111  Q
    || ||||||    
T  192206 atgacctgt 192214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 35215 - 35266
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataac 107  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||||||||    
T  35215 taaaacctattgaaaatgactgaaaaacatgctaagaataacataagataac 35266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 24838 - 24897
Alignment:
Q  55 gtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgttat 114  Q
    |||||||||| | ||||||||||||||||||||||||||| || |||||| || ||||||    
T  24838 gtaaaacctattcaaaatgactgaaaaacatgctaagaataacataagatgacatgttat 24897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 182617 - 182541
Alignment:
Q  10 tcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatg 86  Q
    |||| |||| |||||| || ||||||||||||||||||||||||  |||| |||||| |||   |||||||||||||    
T  182617 tcccgaaatcataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaataaactgaaaaacatg 182541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 36191 - 36141
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataa 106  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  36191 taaaacctattgaaaatgactgaaaaacatgataagaataacgtaagataa 36141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 20359 - 20264
Alignment:
Q  9 gtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagat 104  Q
    ||||| |||| |||||| || ||||||||||||||||||||||||  ||   |||||| || |  | ||||||||||||||||||| |||||||||    
T  20359 gtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctatttcctactaaataaaattgaaaaacatgctaagaataacgtaagat 20264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 23037 - 23128
Alignment:
Q  20 ataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||| || |||||||||||||||||||||| |  ||| ||||| | ||||| ||||||| |||||||||||||  | |||||| ||||||    
T  23037 ataggcaatcgttctaatactcctcctttttggtgctaacacctaattaaaataactgaaatacatgctaagaatagcataagatgacctgt 23128  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 95619 - 95690
Alignment:
Q  14 aaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacat 85  Q
    ||||| |||||| || ||||||||||||||| ||||||||  ||||||| | ||||| ||||||||||||||    
T  95619 aaaatcataggcaatcgttctaatactcctcttttttgctgctaaaacccattgaaattgactgaaaaacat 95690  T

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Target: scaffold0360 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 16580 - 16490
Alignment:
Q  3 acaaatgtcccaaaatgataggccattgttctaatactcctcctttttgctcgtaaaacctactgaaaatgactgaaaaacatgctaagaat 94  Q
    ||||||||||| |||| |||  | |||| ||||||| || ||  || |||| |||||||||||| ||||||||| |||||||||||||||||    
T  16580 acaaatgtcccgaaatcataaacaattgatctaatattcatctattctgcttgtaaaacctactaaaaatgact-aaaaacatgctaagaat 16490  T

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Target: scaffold0072 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 38329 - 38383
Alignment:
Q  57 aaaacctactgaaaatgactgaaaaacatgctaagaattacgtaagataacctgt 111  Q
    |||||||||||||||| ||||| |||||||||||||||  |||||| | ||||||    
T  38329 aaaacctactgaaaataactgacaaacatgctaagaatagcgtaaggtgacctgt 38383  T

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Target: scaffold0637 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 7423 - 7455
Alignment:
Q  56 taaaacctactgaaaatgactgaaaaacatgct 88  Q
    ||||||||||| |||||||||||||||||||||    
T  7423 taaaacctactaaaaatgactgaaaaacatgct 7455  T

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