View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9959_high_6 (Length: 418)

Name: NF9959_high_6
Description: NF9959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9959_high_6
NF9959_high_6
[»] chr3 (9 HSPs)
chr3 (23-273)||(33714855-33715105)
chr3 (23-264)||(33708983-33709224)
chr3 (62-262)||(36811038-36811238)
chr3 (23-191)||(37582300-37582468)
chr3 (56-256)||(37587571-37587771)
chr3 (57-273)||(37580820-37581036)
chr3 (69-256)||(36875474-36875660)
chr3 (23-253)||(33093947-33094177)
chr3 (82-255)||(27005790-27005963)
[»] chr7 (2 HSPs)
chr7 (91-271)||(18724354-18724538)
chr7 (368-404)||(29760083-29760119)
[»] chr8 (3 HSPs)
chr8 (182-267)||(17636407-17636492)
chr8 (182-267)||(18315279-18315364)
chr8 (229-267)||(21235613-21235651)
[»] chr1 (2 HSPs)
chr1 (182-267)||(52082589-52082674)
chr1 (183-267)||(52092786-52092870)
[»] chr4 (5 HSPs)
chr4 (211-267)||(8187097-8187153)
chr4 (210-267)||(1548430-1548487)
chr4 (182-267)||(8184036-8184121)
chr4 (62-142)||(1513535-1513615)
chr4 (227-267)||(1519148-1519188)
[»] chr6 (1 HSPs)
chr6 (227-267)||(12102319-12102359)
[»] chr5 (2 HSPs)
chr5 (182-266)||(41901542-41901626)
chr5 (182-267)||(32267483-32267568)
[»] chr2 (1 HSPs)
chr2 (189-267)||(32785778-32785856)


Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 23 - 273
Target Start/End: Complemental strand, 33715105 - 33714855
Alignment:
Q  23 ggcctcaaaagtatcatcttggcaacagtatcggcagatactttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcc 122  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33715105 ggcctcaaaagtatcatcttggcaacagtatcggcaaatactttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcc 33715006  T
Q  123 tcactcccttctccgtgacatgatgacaatcttccaggtccagatgtagaagccgagggcaactctttgagatcgcatacaatgcgccatcatcaattct 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33715005 tcactcccttctccgtgacatgatgacaatcttccaggtccagatgtagaagccgagggcaactctttgaaatcgcatacaatgcgccatcatcaattct 33714906  T
Q  223 tgagtgtgacaagttcagcacctccagtttggaaacttcaaagttgatcaa 273  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33714905 tgagtttgacaagttcagcacctccagtttggaaacttcaaagttgatcaa 33714855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 23 - 264
Target Start/End: Complemental strand, 33709224 - 33708983
Alignment:
Q  23 ggcctcaaaagtatcatcttggcaacagtatcggcagatactttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcc 122  Q
    |||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||    
T  33709224 ggcctcaaaagtatcatcttggcaacagtatcagcagacactttacgacaatattccaaattaagctctctcaggtgtatgcatttgtctaacactagcc 33709125  T
Q  123 tcactcccttctccgtgacatgatgacaatcttccaggtccagatgtagaagccgagggcaactctttgagatcgcatacaatgcgccatcatcaattct 222  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  33709124 tcactcccttctccgtgacatgatgacatccttccaggtccagatgtagaagccgagggcaactctttgagattgcatacaatgcaccatcatcaattct 33709025  T
Q  223 tgagtgtgacaagttcagcacctccagtttggaaacttcaaa 264  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  33709024 tgagtctgacaagttcagcacctccagtttggaaacctcaaa 33708983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 62 - 262
Target Start/End: Complemental strand, 36811238 - 36811038
Alignment:
Q  62 actttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcctcactcccttctccgtgacatgatgacaatcttccaggt 161  Q
    |||||| ||||| || |||||||||||||||||||||| | |||||| |||| |||| |||  ||||||||||| ||||||| || ||||| ||||||||    
T  36811238 actttacgacaagatcgcaaattaatctctctcaggtgaatgcagttttctaccacttgccggactcccttctctgtgacataataacaatgttccaggt 36811139  T
Q  162 ccagatgtagaagccgagggcaactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttc 261  Q
    | || |||||||||||||||||| |||||||||| ||||||| ||| | || |||||||||||| || |||||||||| |||||||||||||||| ||||    
T  36811138 caagttgtagaagccgagggcaaatctttgagattgcatacagtgctctattatcaattcttgaatgggacaagttcaacacctccagtttggaagcttc 36811039  T
Q  262 a 262  Q
    |    
T  36811038 a 36811038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 37582468 - 37582300
Alignment:
Q  23 ggcctcaaaagtatcatcttggcaacagtatcggcagatactttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcc 122  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||  |||| ||||||||||||||||||||| | ||| |||||| |||| ||||||||    
T  37582468 ggcctcaaaagtatcatcttggcaacaatatcagcagacactttataacaacattgcaaattaatctctctcaagcgtatgcagttttctaccactagcc 37582369  T
Q  123 tcactcccttctccgtgacatgatgacaatcttccaggtccagatgtagaagccgagggcaactctttg 191  Q
    ||||||  ||||| ||| ||| |||||||| |||||||| ||||||||||||||||||| |||||||||    
T  37582368 tcactcagttctctgtgccatcatgacaatgttccaggttcagatgtagaagccgagggaaactctttg 37582300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 56 - 256
Target Start/End: Complemental strand, 37587771 - 37587571
Alignment:
Q  56 gcagatactttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcctcactcccttctccgtgacatgatgacaatctt 155  Q
    ||||| |||| | |||||||| |||||||||||||||||||||||| |||||| || |   ||||||||||||||||||| ||||||| || ||| | ||    
T  37587771 gcagacacttcacgacaatatcgcaaattaatctctctcaggtgtatgcagttttccacagctagcctcactcccttctctgtgacatcataacagtgtt 37587672  T
Q  156 ccaggtccagatgtagaagccgagggcaactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttgga 255  Q
     ||||||||  || ||||||| ||||||| |||||||||||||||||||| |   |||||||||||||||||||||||||||||  ||||||||||||||    
T  37587671 tcaggtccaattgcagaagccaagggcaaatctttgagatcgcatacaatactttatcatcaattcttgagtgtgacaagttcaatacctccagtttgga 37587572  T
Q  256 a 256  Q
    |    
T  37587571 a 37587571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 37581036 - 37580820
Alignment:
Q  57 cagatactttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcctcactcccttctccgtgacatgatgacaatcttc 156  Q
    |||| |||||| |||||| |||||||||||||||||||||||||| ||| || ||||  ||||| |||||||||||||| ||||||| || ||||  ||     
T  37581036 cagacactttacgacaattttgcaaattaatctctctcaggtgtatgcatttttctactactagtctcactcccttctctgtgacatcattacaaaattg 37580937  T
Q  157 caggtccagatgtagaagccgagggcaactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaa 256  Q
     | |||||| || ||||||||||||||| || |||||||| |||||||| |   ||||||||||||||||| |||||||||||  ||||| |||||||||    
T  37580936 taagtccagttgcagaagccgagggcaaatcattgagatcacatacaatactttatcatcaattcttgagtttgacaagttcaatacctcgagtttggaa 37580837  T
Q  257 acttcaaagttgatcaa 273  Q
     ||||| ||||||||||    
T  37580836 gcttcatagttgatcaa 37580820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 256
Target Start/End: Original strand, 36875474 - 36875660
Alignment:
Q  69 gacaatattgcaaattaatctctctc-aggtgtacgcagttgtctaacactagcctcactcccttctccgtgacatgatgacaatcttccaggtccagat 167  Q
    |||||| ||||||||||||||||||| || |||   ||| | |||| | ||| ||||| |||||||||||||||||| | ||||| || ||||||||| |    
T  36875474 gacaatgttgcaaattaatctctctctagatgtgttcagctttctagcgctaacctcaatcccttctccgtgacatggtaacaatgtttcaggtccagtt 36875573  T
Q  168 gtagaagccgagggcaactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaa 256  Q
    | |||| |||||| ||| ||||  ||||| |||||| |||   |||||| |||||||||||||||||||||| ||||||||| ||||||    
T  36875574 gcagaaaccgaggtcaaatctt--agatctcatacagtgcttgatcatcgattcttgagtgtgacaagttcaccacctccagattggaa 36875660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 253
Target Start/End: Complemental strand, 33094177 - 33093947
Alignment:
Q  23 ggcctcaaaagtatcatcttggcaacagtatcggcagatactttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcc 122  Q
    |||||||||||||||||| || | ||| |||  ||||| |||||| |||||| |||||||||||||||||| ||||||  ||||||  ||| ||||||||    
T  33094177 ggcctcaaaagtatcatcctgtcgacaatattagcagaaactttacgacaatgttgcaaattaatctctcttaggtgtttgcagtttactaccactagcc 33094078  T
Q  123 tcactcccttctccgtgacatgatgacaatcttccaggtccagatgtagaagccgagggcaactctttgagatcgcatacaatgcgccatcatcaattct 222  Q
    | ||||| | |||||||| || | | |||| |||||  || || ||| ||||| |||| |||  ||||||||||||||| | | |  ||||||||| ||     
T  33094077 taactccgtcctccgtgatatcacggcaattttccacatcaagttgttgaagctgaggacaaaactttgagatcgcataaagtacttcatcatcaactca 33093978  T
Q  223 tgagtgtgacaagttcagcacctccagtttg 253  Q
    ||| | |||||||||||  ||||| ||||||    
T  33093977 tgactttgacaagttcaaaacctctagtttg 33093947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 255
Target Start/End: Complemental strand, 27005963 - 27005790
Alignment:
Q  82 attaatctctctcaggtgtacgcagttgtctaacactagcctcactcccttctccgtgacatgatgacaatcttccaggtccagatgtagaagccgaggg 181  Q
    |||||||||||| |||| |  ||| || |||| ||||||||| || || ||||| |||||| ||||||||| ||||||||| || || ||||| |  |||    
T  27005963 attaatctctcttaggtatgtgcatttttctaccactagcctaacccctttctctgtgacaagatgacaatgttccaggtcaagttgaagaaggcagggg 27005864  T
Q  182 caactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttgga 255  Q
     || ||||||||||  |||| | ||    || |||||||||||  |||||||||||||  ||||||||||||||    
T  27005863 aaaatctttgagattacataaagtgttgtattatcaattcttgtatgtgacaagttcaagacctccagtttgga 27005790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 271
Target Start/End: Complemental strand, 18724538 - 18724354
Alignment:
Q  91 tctcaggtgtacgcagttgtctaacactagcctcactcccttctccgtgacatgatgacaatcttccaggtccagatgtagaagccgagggcaactcttt 190  Q
    ||||||||||  | |||| |||| |||||||||||  ||||| || ||||||| || ||||  ||||||||| || || | |||||||||| || |||||    
T  18724538 tctcaggtgtgtgtagttttctaccactagcctcatccccttatcggtgacatcataacaacgttccaggtctagttgcaaaagccgagggaaaatcttt 18724439  T
Q  191 gagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagtt----cagcacctccagtttggaaacttcaaagttgatc 271  Q
    ||||||||||||| | |   |||||||||||||||||||||||||||    || |||||| ||||||||| ||||||||||||||    
T  18724438 gagatcgcatacagtactttatcatcaattcttgagtgtgacaagttcaaccaacacctctagtttggaagcttcaaagttgatc 18724354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 404
Target Start/End: Original strand, 29760083 - 29760119
Alignment:
Q  368 gtaatgcatcacaaactccaatcttctttgcataacc 404  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  29760083 gtaaagcatcacaaactccaatcttcttagcataacc 29760119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 17636492 - 17636407
Alignment:
Q  182 caactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    ||||||||||||||| ||||||||||  |||| |||| || ||  ||||||||||||| |||||||| ||||| ||||||||||||    
T  17636492 caactctttgagatcacatacaatgcttcatcgtcaactcctgtttgtgacaagttcaacacctccaatttgggaacttcaaagtt 17636407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 18315364 - 18315279
Alignment:
Q  182 caactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    ||||||||||||||| |||| | |||  ||||||||| | |||  ||||||||||||| |||||||||||||| ||||| ||||||    
T  18315364 caactctttgagatcacatagagtgcttcatcatcaacttttgtatgtgacaagttcaacacctccagtttgggaactttaaagtt 18315279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 21235613 - 21235651
Alignment:
Q  229 tgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  21235613 tgacaagttcaacacctccagtttgggaacttcaaagtt 21235651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 52082589 - 52082674
Alignment:
Q  182 caactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    ||||||||||||||| |||||||||   ||||||||||| |||  | ||||||||||| |||||||| ||||||||||| ||||||    
T  52082589 caactctttgagatcacatacaatgtttcatcatcaatttttgtctttgacaagttcaacacctccaatttggaaacttgaaagtt 52082674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 52092786 - 52092870
Alignment:
Q  183 aactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    |||||||||||||| ||||||||| | ||||||||||| |||  | || |||||||| |||||||| ||||||||||| ||||||    
T  52092786 aactctttgagatcacatacaatgtgtcatcatcaatttttgtctttgccaagttcaacacctccaatttggaaacttgaaagtt 52092870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 8187153 - 8187097
Alignment:
Q  211 atcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    |||||||| |||||  ||||||||||||| ||||||||||||||||| |||||||||    
T  8187153 atcatcaactcttgtatgtgacaagttcaacacctccagtttggaaatttcaaagtt 8187097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 1548487 - 1548430
Alignment:
Q  210 catcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    |||||||||| ||||  ||||||||||||| |||||||||||||| || |||||||||    
T  1548487 catcatcaatacttgtatgtgacaagttcaacacctccagtttgggaatttcaaagtt 1548430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 8184121 - 8184036
Alignment:
Q  182 caactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    |||||||||||||| ||||| | |||   |||||||| |||||  ||||||||||||| |||||| ||||| | ||||||||||||    
T  8184121 caactctttgagattgcatagagtgctatatcatcaactcttgtatgtgacaagttcaacacctctagtttcggaacttcaaagtt 8184036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 1513615 - 1513535
Alignment:
Q  62 actttaggacaatattgcaaattaatctctctcaggtgtacgcagttgtctaacactagcctcactcccttctccgtgaca 142  Q
    ||||||| |||||||| |||||| ||||||||||| |||  ||| || |||| ||| ||| |||||||| |||| ||||||    
T  1513615 actttagaacaatatttcaaattgatctctctcagttgtgtgcatttttctagcacaagcttcactcccatctctgtgaca 1513535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 1519188 - 1519148
Alignment:
Q  227 tgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    ||||||||||||| |||||| ||||||| ||||||||||||    
T  1519188 tgtgacaagttcaacacctctagtttgggaacttcaaagtt 1519148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 12102319 - 12102359
Alignment:
Q  227 tgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  12102319 tgtgacaagttcaacacctccagtttgggaacttcaaagtt 12102359  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 41901626 - 41901542
Alignment:
Q  182 caactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagt 266  Q
    |||||||||||||||  ||| | |||  ||||||||| | |||  | ||||||||||| |||||||||||||| |||||||||||    
T  41901626 caactctttgagatcatataaagtgcttcatcatcaacttttgtatatgacaagttcaacacctccagtttgggaacttcaaagt 41901542  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 32267483 - 32267568
Alignment:
Q  182 caactctttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    |||||||||||||||  ||| | |||  ||||||||| | |||  |||||||||||||  ||||||| ||||| ||||||||||||    
T  32267483 caactctttgagatcatataaagtgcttcatcatcaactattgtttgtgacaagttcaatacctccaatttgggaacttcaaagtt 32267568  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 32785856 - 32785778
Alignment:
Q  189 ttgagatcgcatacaatgcgccatcatcaattcttgagtgtgacaagttcagcacctccagtttggaaacttcaaagtt 267  Q
    |||||||| |||| | |||  |||||||||||||||  ||||||||||||| |||||| ||||||| | ||| ||||||    
T  32785856 ttgagatcacataaagtgcttcatcatcaattcttgtatgtgacaagttcaacacctctagtttgggagctttaaagtt 32785778  T

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