View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9959_low_4 (Length: 570)

Name: NF9959_low_4
Description: NF9959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9959_low_4
NF9959_low_4
[»] chr4 (88 HSPs)
chr4 (431-570)||(11592281-11592420)
chr4 (431-570)||(11645699-11645838)
chr4 (167-244)||(11645873-11645950)
chr4 (245-364)||(4550398-4550517)
chr4 (243-364)||(51224724-51224845)
chr4 (243-364)||(56025320-56025441)
chr4 (49-145)||(11592113-11592209)
chr4 (244-355)||(8026651-8026762)
chr4 (253-355)||(55642501-55642603)
chr4 (242-355)||(5208212-5208325)
chr4 (245-364)||(1796430-1796547)
chr4 (245-357)||(24019859-24019973)
chr4 (245-364)||(27001297-27001416)
chr4 (245-371)||(47105968-47106094)
chr4 (245-338)||(9032870-9032963)
chr4 (16-97)||(11645961-11646042)
chr4 (243-364)||(37022325-37022446)
chr4 (242-364)||(43434404-43434514)
chr4 (243-364)||(44368088-44368209)
chr4 (243-364)||(51377179-51377300)
chr4 (245-355)||(24235393-24235503)
chr4 (245-355)||(31221486-31221596)
chr4 (261-355)||(46844145-46844239)
chr4 (253-338)||(32901419-32901504)
chr4 (261-338)||(36728526-36728603)
chr4 (243-355)||(7037370-7037482)
chr4 (253-349)||(41495092-41495188)
chr4 (244-364)||(45548671-45548791)
chr4 (242-334)||(53384227-53384318)
chr4 (242-349)||(3223068-3223175)
chr4 (289-364)||(54165091-54165168)
chr4 (253-338)||(15638220-15638305)
chr4 (289-361)||(5466427-5466499)
chr4 (253-337)||(20632544-20632628)
chr4 (243-364)||(31048952-31049061)
chr4 (245-349)||(49424708-49424812)
chr4 (244-364)||(55267888-55268008)
chr4 (292-343)||(29406972-29407023)
chr4 (293-364)||(40721900-40721971)
chr4 (241-364)||(42177934-42178057)
chr4 (240-364)||(45779186-45779298)
chr4 (253-338)||(610896-610982)
chr4 (242-336)||(4971898-4971992)
chr4 (56-150)||(19238544-19238638)
chr4 (291-361)||(45923446-45923515)
chr4 (246-364)||(52669498-52669616)
chr4 (245-335)||(53662330-53662420)
chr4 (253-338)||(2193705-2193790)
chr4 (244-349)||(19910889-19910994)
chr4 (253-338)||(32365563-32365648)
chr4 (241-338)||(36512932-36513028)
chr4 (284-336)||(35580202-35580254)
chr4 (289-333)||(45176665-45176709)
chr4 (289-364)||(20956514-20956589)
chr4 (275-338)||(43358703-43358766)
chr4 (297-364)||(44170559-44170626)
chr4 (275-349)||(9162145-9162219)
chr4 (244-338)||(33483993-33484087)
chr4 (244-338)||(47519607-47519701)
chr4 (244-278)||(54165058-54165092)
chr4 (56-150)||(55427167-55427261)
chr4 (249-282)||(439294-439327)
chr4 (289-338)||(1562468-1562517)
chr4 (245-290)||(12694316-12694361)
chr4 (244-333)||(13182426-13182515)
chr4 (253-338)||(13267375-13267459)
chr4 (253-338)||(18568711-18568796)
chr4 (253-338)||(20056472-20056557)
chr4 (244-336)||(24154704-24154794)
chr4 (289-338)||(36812335-36812384)
chr4 (57-150)||(37109319-37109412)
chr4 (296-349)||(39844197-39844250)
chr4 (289-338)||(39880962-39881011)
chr4 (244-277)||(45923517-45923550)
chr4 (289-338)||(48743800-48743849)
chr4 (253-349)||(8681020-8681116)
chr4 (94-150)||(9241030-9241086)
chr4 (289-349)||(12241137-12241196)
chr4 (285-349)||(19245967-19246031)
chr4 (280-364)||(29949596-29949680)
chr4 (245-333)||(30866445-30866533)
chr4 (275-343)||(31413704-31413772)
chr4 (289-349)||(33820269-33820328)
chr4 (279-343)||(36792417-36792481)
chr4 (275-343)||(38952774-38952842)
chr4 (289-349)||(40756000-40756060)
chr4 (289-337)||(41119458-41119506)
chr4 (306-350)||(46173615-46173659)
[»] scaffold0576 (1 HSPs)
scaffold0576 (239-360)||(9498-9619)
[»] chr6 (34 HSPs)
chr6 (239-360)||(15364727-15364848)
chr6 (239-364)||(15328553-15328678)
chr6 (243-364)||(25924750-25924871)
chr6 (243-364)||(32784802-32784923)
chr6 (243-364)||(34413155-34413276)
chr6 (248-364)||(28965731-28965847)
chr6 (245-364)||(237286-237405)
chr6 (244-335)||(2881426-2881517)
chr6 (254-355)||(6435109-6435210)
chr6 (248-364)||(3660244-3660360)
chr6 (246-343)||(3339388-3339485)
chr6 (247-335)||(2862165-2862253)
chr6 (240-335)||(1803962-1804057)
chr6 (253-335)||(27334957-27335039)
chr6 (253-335)||(27395697-27395779)
chr6 (289-361)||(26668563-26668635)
chr6 (241-364)||(2056847-2056970)
chr6 (253-355)||(12441600-12441702)
chr6 (246-364)||(17902581-17902699)
chr6 (244-349)||(11017461-11017566)
chr6 (246-364)||(31368501-31368615)
chr6 (263-343)||(17835697-17835777)
chr6 (242-338)||(21210346-21210442)
chr6 (306-349)||(2886694-2886737)
chr6 (239-349)||(9954627-9954737)
chr6 (260-338)||(11635707-11635783)
chr6 (85-148)||(33549121-33549184)
chr6 (84-150)||(12234502-12234568)
chr6 (248-338)||(29376607-29376697)
chr6 (253-338)||(1688269-1688354)
chr6 (253-294)||(2689086-2689127)
chr6 (266-338)||(4923036-4923108)
chr6 (301-349)||(16533204-16533252)
chr6 (279-343)||(24437529-24437592)
[»] chr3 (60 HSPs)
chr3 (245-364)||(40478175-40478294)
chr3 (245-364)||(41877752-41877871)
chr3 (242-364)||(45295624-45295746)
chr3 (253-361)||(25542867-25542975)
chr3 (241-364)||(31007233-31007359)
chr3 (246-364)||(42718185-42718301)
chr3 (244-367)||(14992134-14992259)
chr3 (274-364)||(25142692-25142782)
chr3 (245-364)||(52453980-52454099)
chr3 (242-364)||(34021348-34021470)
chr3 (245-355)||(35756053-35756163)
chr3 (239-364)||(11327172-11327297)
chr3 (244-364)||(13159725-13159845)
chr3 (243-338)||(43900862-43900957)
chr3 (241-364)||(50879659-50879782)
chr3 (241-355)||(50279971-50280085)
chr3 (243-364)||(28263609-28263730)
chr3 (242-355)||(30400041-30400154)
chr3 (253-338)||(54233397-54233482)
chr3 (244-364)||(8254091-8254211)
chr3 (243-355)||(36819029-36819141)
chr3 (241-364)||(23163029-23163152)
chr3 (252-338)||(2009744-2009829)
chr3 (253-338)||(23906883-23906968)
chr3 (246-367)||(44855312-44855433)
chr3 (253-338)||(51717531-51717616)
chr3 (248-364)||(20714307-20714423)
chr3 (244-364)||(46344478-46344598)
chr3 (241-349)||(53102786-53102894)
chr3 (245-364)||(3957906-3958025)
chr3 (253-338)||(43441760-43441845)
chr3 (253-358)||(50652458-50652563)
chr3 (244-364)||(3069462-3069582)
chr3 (246-297)||(7039123-7039174)
chr3 (101-148)||(21960568-21960615)
chr3 (279-338)||(32687882-32687941)
chr3 (248-335)||(32931809-32931896)
chr3 (296-355)||(37303013-37303072)
chr3 (51-138)||(44743817-44743904)
chr3 (253-355)||(47056421-47056524)
chr3 (275-338)||(47484369-47484432)
chr3 (284-338)||(3483209-3483263)
chr3 (289-343)||(7949873-7949927)
chr3 (85-150)||(2667877-2667942)
chr3 (51-148)||(4844473-4844570)
chr3 (51-148)||(4870169-4870266)
chr3 (253-338)||(9027963-9028047)
chr3 (296-349)||(26279963-26280016)
chr3 (248-349)||(27162358-27162459)
chr3 (296-349)||(32457694-32457747)
chr3 (243-340)||(38957402-38957499)
chr3 (253-349)||(1208025-1208120)
chr3 (306-338)||(1765483-1765515)
chr3 (241-349)||(11173529-11173636)
chr3 (254-294)||(20080082-20080122)
chr3 (244-324)||(23183606-23183686)
chr3 (274-349)||(33007439-33007515)
chr3 (243-287)||(42864202-42864246)
chr3 (253-349)||(49130933-49131028)
chr3 (285-321)||(52678521-52678557)
[»] chr5 (43 HSPs)
chr5 (245-365)||(7077227-7077347)
chr5 (241-364)||(30574261-30574384)
chr5 (242-364)||(36548265-36548387)
chr5 (243-364)||(19271923-19272044)
chr5 (245-364)||(26685755-26685874)
chr5 (245-364)||(26955486-26955605)
chr5 (240-364)||(12512857-12512981)
chr5 (248-364)||(32634772-32634888)
chr5 (245-364)||(3263396-3263515)
chr5 (245-364)||(15622108-15622227)
chr5 (241-364)||(38010936-38011059)
chr5 (242-355)||(11464008-11464121)
chr5 (243-364)||(12417690-12417811)
chr5 (289-364)||(31006123-31006196)
chr5 (243-338)||(30776709-30776804)
chr5 (242-364)||(35972638-35972756)
chr5 (244-338)||(4292873-4292967)
chr5 (242-355)||(3154528-3154641)
chr5 (253-338)||(8959250-8959335)
chr5 (239-364)||(9594542-9594667)
chr5 (268-364)||(28501681-28501777)
chr5 (248-364)||(33823585-33823701)
chr5 (245-364)||(9596702-9596821)
chr5 (289-364)||(41192651-41192726)
chr5 (242-364)||(22920377-22920499)
chr5 (253-338)||(17489438-17489523)
chr5 (245-364)||(4954530-4954649)
chr5 (245-355)||(10522848-10522958)
chr5 (277-349)||(34381091-34381163)
chr5 (255-338)||(12401282-12401365)
chr5 (245-364)||(25345402-25345521)
chr5 (279-349)||(10232578-10232648)
chr5 (279-349)||(12661869-12661939)
chr5 (240-278)||(34888846-34888884)
chr5 (253-338)||(372616-372701)
chr5 (253-338)||(14914460-14914544)
chr5 (253-338)||(20719912-20719996)
chr5 (285-358)||(25038150-25038223)
chr5 (245-278)||(31006195-31006228)
chr5 (289-338)||(32873081-32873130)
chr5 (292-364)||(16553568-16553640)
chr5 (289-349)||(36415994-36416054)
chr5 (253-349)||(39595353-39595448)
[»] chr7 (45 HSPs)
chr7 (237-364)||(33881585-33881712)
chr7 (245-390)||(5900926-5901069)
chr7 (245-333)||(17157228-17157316)
chr7 (244-335)||(29609764-29609856)
chr7 (245-364)||(26041374-26041493)
chr7 (245-364)||(27164725-27164844)
chr7 (245-364)||(30864305-30864424)
chr7 (253-338)||(10014851-10014936)
chr7 (253-338)||(25614717-25614802)
chr7 (253-338)||(42060747-42060832)
chr7 (243-364)||(44511203-44511324)
chr7 (245-349)||(39369381-39369485)
chr7 (245-364)||(33050247-33050366)
chr7 (253-364)||(42431787-42431898)
chr7 (241-355)||(38978565-38978678)
chr7 (245-364)||(116695-116814)
chr7 (245-334)||(30402081-30402168)
chr7 (253-346)||(42476464-42476557)
chr7 (301-349)||(2469771-2469819)
chr7 (244-364)||(20406605-20406725)
chr7 (244-364)||(29162166-29162286)
chr7 (245-335)||(23330002-23330090)
chr7 (246-335)||(3344955-3345044)
chr7 (253-338)||(8742473-8742558)
chr7 (245-314)||(16645554-16645623)
chr7 (245-314)||(17619915-17619984)
chr7 (243-355)||(19880117-19880229)
chr7 (253-338)||(37385129-37385214)
chr7 (285-338)||(42640933-42640986)
chr7 (253-338)||(47530187-47530272)
chr7 (242-338)||(25332385-25332480)
chr7 (245-355)||(2346947-2347057)
chr7 (279-349)||(19426659-19426728)
chr7 (275-349)||(22331129-22331203)
chr7 (241-355)||(43255451-43255565)
chr7 (279-349)||(47424908-47424977)
chr7 (289-338)||(21037168-21037217)
chr7 (289-338)||(21153142-21153191)
chr7 (296-349)||(30862715-30862768)
chr7 (296-349)||(30982293-30982346)
chr7 (296-349)||(36990120-36990173)
chr7 (253-338)||(44894371-44894455)
chr7 (301-349)||(34348971-34349019)
chr7 (266-338)||(37325728-37325800)
chr7 (243-355)||(37392116-37392228)
[»] scaffold0115 (1 HSPs)
scaffold0115 (246-364)||(35382-35500)
[»] chr2 (57 HSPs)
chr2 (245-361)||(30413620-30413736)
chr2 (241-364)||(43936345-43936466)
chr2 (244-364)||(33003887-33004007)
chr2 (246-364)||(12175217-12175335)
chr2 (244-364)||(10550346-10550466)
chr2 (244-364)||(38021420-38021539)
chr2 (245-364)||(44484544-44484663)
chr2 (243-340)||(36582344-36582441)
chr2 (248-364)||(37966420-37966536)
chr2 (285-364)||(27540079-27540158)
chr2 (243-364)||(3195973-3196094)
chr2 (244-357)||(33029989-33030102)
chr2 (253-338)||(5962728-5962813)
chr2 (248-361)||(22353066-22353179)
chr2 (261-349)||(30973895-30973983)
chr2 (245-343)||(23047971-23048069)
chr2 (241-355)||(29871239-29871353)
chr2 (243-364)||(6884974-6885095)
chr2 (253-349)||(12192026-12192122)
chr2 (251-338)||(9694955-9695042)
chr2 (257-364)||(36383526-36383633)
chr2 (51-150)||(37480090-37480189)
chr2 (242-364)||(30192236-30192358)
chr2 (253-338)||(36909740-36909824)
chr2 (244-304)||(4097068-4097128)
chr2 (244-364)||(38246638-38246758)
chr2 (50-150)||(42327356-42327456)
chr2 (245-364)||(29893674-29893793)
chr2 (279-349)||(34138959-34139030)
chr2 (51-150)||(42602569-42602668)
chr2 (243-349)||(23391141-23391247)
chr2 (253-338)||(26809579-26809665)
chr2 (253-338)||(12358403-12358488)
chr2 (289-338)||(13466007-13466056)
chr2 (280-349)||(14954522-14954591)
chr2 (245-338)||(33857307-33857400)
chr2 (243-335)||(27307131-27307223)
chr2 (292-364)||(39133786-39133858)
chr2 (289-364)||(1298258-1298333)
chr2 (245-364)||(3298993-3299112)
chr2 (289-364)||(6851591-6851666)
chr2 (242-349)||(28165208-28165315)
chr2 (301-355)||(6639416-6639470)
chr2 (245-283)||(6851559-6851597)
chr2 (283-349)||(19913863-19913929)
chr2 (279-349)||(26321620-26321689)
chr2 (286-344)||(34101073-34101131)
chr2 (289-355)||(39744526-39744592)
chr2 (243-292)||(4061983-4062032)
chr2 (274-343)||(13104564-13104633)
chr2 (296-349)||(23880174-23880227)
chr2 (274-343)||(32750083-32750152)
chr2 (277-338)||(41353417-41353478)
chr2 (301-349)||(16051332-16051380)
chr2 (243-275)||(27540156-27540188)
chr2 (289-349)||(31635742-31635802)
chr2 (253-349)||(38572018-38572114)
[»] chr8 (68 HSPs)
chr8 (242-340)||(11089664-11089763)
chr8 (241-364)||(43587705-43587828)
chr8 (245-364)||(34972131-34972248)
chr8 (245-364)||(38504234-38504353)
chr8 (245-364)||(43602311-43602430)
chr8 (248-360)||(23952562-23952673)
chr8 (241-364)||(1065481-1065604)
chr8 (245-364)||(30927819-30927938)
chr8 (241-364)||(41273579-41273702)
chr8 (245-338)||(6105323-6105416)
chr8 (241-349)||(6825161-6825269)
chr8 (248-364)||(41293613-41293728)
chr8 (245-355)||(39258943-39259053)
chr8 (253-338)||(11138986-11139071)
chr8 (244-364)||(19723093-19723213)
chr8 (253-337)||(30129500-30129584)
chr8 (289-364)||(29509330-29509405)
chr8 (253-343)||(2597056-2597146)
chr8 (248-338)||(33817247-33817337)
chr8 (50-167)||(968360-968477)
chr8 (253-338)||(5925145-5925230)
chr8 (242-335)||(14228786-14228879)
chr8 (245-366)||(14531683-14531804)
chr8 (253-349)||(37562037-37562133)
chr8 (245-364)||(40211635-40211754)
chr8 (297-355)||(6849408-6849466)
chr8 (279-349)||(11879412-11879482)
chr8 (279-349)||(11896828-11896898)
chr8 (253-355)||(36064103-36064205)
chr8 (253-355)||(36497734-36497836)
chr8 (253-338)||(43186386-43186469)
chr8 (253-338)||(5924900-5924985)
chr8 (241-294)||(12783762-12783815)
chr8 (253-338)||(34765746-34765831)
chr8 (244-349)||(36593673-36593778)
chr8 (284-349)||(37033029-37033093)
chr8 (285-338)||(39153612-39153665)
chr8 (272-364)||(13884380-13884472)
chr8 (279-355)||(30925577-30925652)
chr8 (289-349)||(40719576-40719636)
chr8 (241-355)||(6745926-6746041)
chr8 (277-335)||(41519951-41520010)
chr8 (285-348)||(44086440-44086503)
chr8 (56-150)||(2203507-2203601)
chr8 (51-145)||(6536540-6536634)
chr8 (245-355)||(6656227-6656337)
chr8 (245-355)||(6736629-6736739)
chr8 (253-343)||(7129618-7129707)
chr8 (253-354)||(8888326-8888428)
chr8 (245-355)||(20288606-20288716)
chr8 (245-355)||(21075235-21075345)
chr8 (275-349)||(22836057-22836131)
chr8 (241-349)||(34474028-34474137)
chr8 (248-338)||(35595300-35595390)
chr8 (244-293)||(9208065-9208114)
chr8 (241-322)||(13565402-13565483)
chr8 (241-282)||(27630893-27630934)
chr8 (296-349)||(28473484-28473537)
chr8 (289-338)||(30608642-30608691)
chr8 (244-333)||(34970300-34970389)
chr8 (306-355)||(39027557-39027606)
chr8 (301-361)||(11114613-11114673)
chr8 (94-150)||(16852355-16852411)
chr8 (94-150)||(19703492-19703548)
chr8 (274-350)||(22767208-22767284)
chr8 (94-150)||(29858054-29858110)
chr8 (243-335)||(37568498-37568590)
chr8 (301-349)||(40102102-40102150)
[»] chr1 (52 HSPs)
chr1 (243-364)||(10385478-10385599)
chr1 (245-364)||(43195977-43196096)
chr1 (242-357)||(49189096-49189211)
chr1 (244-364)||(5383823-5383943)
chr1 (244-364)||(37669462-37669582)
chr1 (280-364)||(2257617-2257701)
chr1 (242-364)||(6829670-6829792)
chr1 (254-364)||(36669267-36669377)
chr1 (243-364)||(13813622-13813743)
chr1 (241-338)||(19920852-19920949)
chr1 (244-364)||(27578246-27578366)
chr1 (245-364)||(26501359-26501478)
chr1 (270-361)||(39669873-39669964)
chr1 (245-364)||(50035426-50035545)
chr1 (242-364)||(3291310-3291432)
chr1 (253-338)||(42843240-42843325)
chr1 (244-364)||(7371835-7371955)
chr1 (253-349)||(50777319-50777415)
chr1 (253-364)||(9011709-9011820)
chr1 (253-355)||(50797853-50797955)
chr1 (285-338)||(10302271-10302324)
chr1 (243-364)||(25130767-25130888)
chr1 (243-364)||(25995524-25995647)
chr1 (245-349)||(27895649-27895752)
chr1 (241-364)||(29489243-29489366)
chr1 (289-355)||(29362624-29362690)
chr1 (285-338)||(8670162-8670215)
chr1 (253-338)||(51193029-51193114)
chr1 (244-284)||(24749629-24749669)
chr1 (243-283)||(27563617-27563657)
chr1 (289-349)||(42615936-42615996)
chr1 (253-361)||(43457716-43457823)
chr1 (253-352)||(7078396-7078495)
chr1 (51-150)||(17745219-17745317)
chr1 (279-349)||(15061924-15061994)
chr1 (306-364)||(26585122-26585180)
chr1 (253-322)||(46902708-46902778)
chr1 (284-337)||(366748-366801)
chr1 (286-347)||(4618725-4618786)
chr1 (57-150)||(9165163-9165256)
chr1 (241-349)||(22389411-22389517)
chr1 (292-361)||(27563551-27563620)
chr1 (241-278)||(51704683-51704720)
chr1 (307-364)||(51704737-51704794)
chr1 (285-321)||(3606024-3606060)
chr1 (287-355)||(8905801-8905869)
chr1 (274-350)||(25302562-25302638)
chr1 (94-146)||(31383803-31383855)
chr1 (245-349)||(35043608-35043712)
chr1 (50-150)||(36371485-36371585)
chr1 (90-150)||(40257414-40257474)
chr1 (253-349)||(40610308-40610403)
[»] scaffold0172 (1 HSPs)
scaffold0172 (245-364)||(17039-17158)
[»] scaffold0514 (1 HSPs)
scaffold0514 (244-349)||(1383-1488)
[»] scaffold0085 (1 HSPs)
scaffold0085 (245-364)||(31188-31307)
[»] scaffold0002 (2 HSPs)
scaffold0002 (244-364)||(147143-147263)
scaffold0002 (85-150)||(94967-95032)
[»] scaffold0522 (1 HSPs)
scaffold0522 (245-349)||(2392-2496)
[»] scaffold0004 (1 HSPs)
scaffold0004 (243-338)||(249028-249123)
[»] scaffold0121 (1 HSPs)
scaffold0121 (242-358)||(29852-29969)
[»] scaffold0119 (1 HSPs)
scaffold0119 (289-361)||(2158-2230)
[»] scaffold0027 (1 HSPs)
scaffold0027 (253-361)||(5146-5254)
[»] scaffold0011 (1 HSPs)
scaffold0011 (245-349)||(18674-18777)
[»] scaffold0193 (1 HSPs)
scaffold0193 (244-338)||(24763-24857)
[»] scaffold0054 (1 HSPs)
scaffold0054 (275-349)||(31518-31592)
[»] scaffold0003 (1 HSPs)
scaffold0003 (242-343)||(88893-88994)
[»] scaffold0258 (1 HSPs)
scaffold0258 (85-148)||(15319-15382)
[»] scaffold0618 (1 HSPs)
scaffold0618 (244-364)||(3424-3545)
[»] scaffold0299 (1 HSPs)
scaffold0299 (85-150)||(11543-11608)
[»] scaffold0049 (1 HSPs)
scaffold0049 (253-338)||(72067-72152)


Alignment Details
Target: chr4 (Bit Score: 136; Significance: 1e-70; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 431 - 570
Target Start/End: Original strand, 11592281 - 11592420
Alignment:
Q  431 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaacagtcaaaagagaagccaaaaggttccaagtttgcataacaccacc 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11592281 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaacagtcaaaagagaagccaaaaggttccaagattgcataacaccacc 11592380  T
Q  531 accattattgtttctcattccatgtccaaaaacatgaccc 570  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11592381 accattattgtttctcattccatgtccaaaaacatgaccc 11592420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 431 - 570
Target Start/End: Complemental strand, 11645838 - 11645699
Alignment:
Q  431 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaacagtcaaaagagaagccaaaaggttccaagtttgcataacaccacc 530  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11645838 agctagaacataccttagtggccctaggctccaagtaaacagagttaacaaaaacagtcaaaagagaagccaaaaggttccaagattgcataacaccacc 11645739  T
Q  531 accattattgtttctcattccatgtccaaaaacatgaccc 570  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11645738 accattattgtttctcattccatgtccaaaaacatgaccc 11645699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 11645950 - 11645873
Alignment:
Q  167 atcaacataaatttttatcaatcaattaagctaaatagtcaaactaaaacaatatgaaatgtgagcagcaattgaaaa 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645950 atcaacataaatttttatcaatcaattaagctaaatagtcaaactaaaacaatatgaaatgtgagcagcaattgaaaa 11645873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 4550517 - 4550398
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||| ||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||     
T  4550517 gagcaatgatatttatacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaag 4550418  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||||||||||||    
T  4550417 agagaggataataacatcat 4550398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 243 - 364
Target Start/End: Original strand, 51224724 - 51224845
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| |||| |||||||||| | |    
T  51224724 aagagcaatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaagaa 51224823  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||||||||||||    
T  51224824 agagagaggataataacatcat 51224845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 56025441 - 56025320
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||||||||| |||    
T  56025441 aagagcaatgatatttgtacattcatttaatgacaactttggtgacaactttgattttctctcttttgattggtcaaaaacaatggagagagaaaaagga 56025342  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| ||||||||    
T  56025341 acagagaggataacaacatcat 56025320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 11592113 - 11592209
Alignment:
Q  49 ctaagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccac 145  Q
    |||||| | |||||||||||||||||||||||||| |||||||| |||||| |||||  ||| |||||||||| ||||||||||| | |||||||||    
T  11592113 ctaagaagttaaattaaccaactcaaattggttccagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaaggcaataccac 11592209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 244 - 355
Target Start/End: Original strand, 8026651 - 8026762
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  8026651 agagcaatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 8026750  T
Q  344 tagagaagataa 355  Q
     ||||| |||||    
T  8026751 gagagaggataa 8026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 55642501 - 55642603
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||||||||| ||||||| || |||||||| ||| ||| |||  ||| |||| |||||||||||||||||||||||||||| |||| ||||| ||    
T  55642501 atatttgtacatccaattaatgataactttggtgacaaccttgcttttatctctttttattggtaaaaaataatggagagagaaaaaggaagagagagga 55642600  T
Q  353 taa 355  Q
    |||    
T  55642601 taa 55642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 5208212 - 5208325
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||    
T  5208212 aaagagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagg 5208311  T
Q  342 aatagagaagataa 355  Q
    || ||||| |||||    
T  5208312 aagagagaggataa 5208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 1796547 - 1796430
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| | ||||||||| |||| || | |||||| ||||||||||||||||||||| ||||     
T  1796547 gagcaatgatatttgtacatccattccatgacaactttagtgaca-ctttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaag 1796449  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| ||||||||    
T  1796448 agagaggataa-aacatcat 1796430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 357
Target Start/End: Original strand, 24019859 - 24019973
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatg--gagagagaaaaggga 342  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| ||| ||||||  |||| ||||||||||| ||||| | ||  ||||||||||| |||    
T  24019859 gagcaatgatatttgtacatctatttaatgacaactttggtgacaaccttgtttctctctcttttgattggtcaaaaacattggagagagagaaaaagga 24019958  T
Q  343 atagagaagataata 357  Q
    | ||||| |||||||    
T  24019959 agagagaggataata 24019973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 27001297 - 27001416
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  27001297 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 27001396  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  27001397 agagaggataagaccatcat 27001416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 371
Target Start/End: Complemental strand, 47106094 - 47105968
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | ||     
T  47106094 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 47105995  T
Q  345 agagaagataataacatcatctgtgta 371  Q
    ||||| ||||| | |||||| ||||||    
T  47105994 agagaggataagaccatcatgtgtgta 47105968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 9032963 - 9032870
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| |||||||||||||||||| || |||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  9032963 gagcaatgatatttgtacatccatttcattacaactttagtgacaaccttgtttttctctttttttattggtcaaaaacaatggagagagaaaa 9032870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 11646042 - 11645961
Alignment:
Q  16 aagttatccacagtaaagcacactannnnnnnnctaagatgctaaattaaccaactcaaattggttccggagataattgaac 97  Q
    |||||||||||| ||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11646042 aagttatccacattaaagcacactattttttttctaagaagctaaattaaccaactcaaattggttccggagataatcgaac 11645961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 37022446 - 37022325
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    |||||| || |||||||||||||||||| ||||||| ||| |||||||  ||||||| || | |||| |||||| ||||| |||||||||| |||| |||    
T  37022446 aagagcgatgatatttgtacatccatttcatgacaactttagtgataatcttgtttttctttttttttattggtcaaaaacaatggagagataaaaagga 37022347  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  37022346 agagagatgataagaccatcat 37022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 242 - 364
Target Start/End: Complemental strand, 43434514 - 43434404
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| ||||||||||||||||||||||||||            |||||||||||| | ||||||||||| ||||| |||||| |||||||| ||    
T  43434514 aaagagcaatgatatttgtacatccatttaatgacaa------------ctttgttttcctatcttttgattggtcaaaaacaatggacagagaaaaagg 43434427  T
Q  342 aatagagaagataataacatcat 364  Q
    || |||||| |||||||||||||    
T  43434426 aagagagaaaataataacatcat 43434404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 364
Target Start/End: Original strand, 44368088 - 44368209
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||| ||| || |||| |||| || | ||| || ||||| ||||||||||||||| |||    
T  44368088 aagagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttatttgtcaaaaacaatggagagagaaaaagga 44368187  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  44368188 agagagatgataagaccatcat 44368209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 364
Target Start/End: Original strand, 51377179 - 51377300
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||||||||   |||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||    
T  51377179 aagagcaatgatatttgtacatccattccttgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagga 51377278  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  51377279 agagagaggataagaccatcat 51377300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 24235503 - 24235393
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| || |||  ||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  24235503 gagcaatgatatttgtacatccatttcatgacaactttagtgacaattttaattttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 24235404  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  24235403 agagaggataa 24235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 31221596 - 31221486
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||  ||||||||||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  31221596 gagcaatgatatttgtacatcaattccatgacaattttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 31221497  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  31221496 agagaggataa 31221486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 46844145 - 46844239
Alignment:
Q  261 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    ||||| |||||| ||||| |||||||| ||||||||||| |||| |||| |||||| ||||| |||||||||||||||  ||| |||||| ||||    
T  46844145 acatctatttaaggacaactttggtgacaactttgtttttctctctttttattggttaaaaacaatggagagagaaaaaagaagagagaaaataa 46844239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 32901504 - 32901419
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || |||| ||||||||||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  32901504 atatttgtacatccaattgatgataattttggtgacaatcttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 32901419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 36728526 - 36728603
Alignment:
Q  261 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| || ||||||| |||||||| ||||||||||| |||| || | |||||||||||| |||||||||||||||    
T  36728526 acatccaattgatgacaactttggtgacaactttgtttttctctcttcttattggtaaaaaacaatggagagagaaaa 36728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 355
Target Start/End: Original strand, 7037370 - 7037482
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| ||||||||||||| |||  ||||||| ||| | || ||| ||||||| |||  || | |||||| ||||| ||||||||||||||| |||    
T  7037370 aagagcaattatatttgtacatctattccatgacaactttagggacaaccttgtttttctcccttcttattggtcaaaaacaatggagagagaaaaagga 7037469  T
Q  343 atagagaagataa 355  Q
    | |||||||||||    
T  7037470 agagagaagataa 7037482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 41495188 - 41495092
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| ||| | || |||| ||||||||||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||||    
T  41495188 atatttgtatatctaattgatgataattttggtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagaga 41495092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 45548671 - 45548791
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||||||||| || ||||||||| ||| ||||  || |||||||  |||||||| ||||||  |||| ||| |||||| |||| ||||    
T  45548671 agagcaatgatatttgtacatctatctaatgacaactttagtgacgaccttgtttttttctatttttattggttgaaaacaatagagagacaaaaaggaa 45548770  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| |||||| |||||||    
T  45548771 gagagaggataatgacatcat 45548791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 242 - 334
Target Start/End: Original strand, 53384227 - 53384318
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag 334  Q
    ||||||||||||||||||||||||||||| |||| || ||| |||| || |||||||| |||| || | |||||| ||||| |||||||||||    
T  53384227 aaagagcaataatatttgtacatccattttatgataactttagtgacaa-tttgtttttctctcttcttattggtcaaaaacaatggagagag 53384318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 3223175 - 3223068
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||||  |||| || ||| |||| ||| || |||| |||| || | |||||| ||||| ||||||||||||||| ||    
T  3223175 aaagagcaatgatatttgtacatccattccatgaaaactttagtgacaaccttctttttctctcttcttattggtcaaaaacaatggagagagaaaaagg 3223076  T
Q  342 aatagaga 349  Q
    || |||||    
T  3223075 aagagaga 3223068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 289 - 364
Target Start/End: Original strand, 54165091 - 54165168
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga--atagagaagataataacatcat 364  Q
    |||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||  | ||||| ||||||||||||||    
T  54165091 aactttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaagagagagaggataataacatcat 54165168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 15638305 - 15638220
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||  ||||| |||||||||||||||    
T  15638305 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggacaaaaacaatggagagagaaaa 15638220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 5466427 - 5466499
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 361  Q
    |||||| ||||| |||||||  |||||| ||||||||| ||||||||||| ||||||||||| |||| |||||    
T  5466427 aactttattttcttctatttctattggttaaaaataatagagagagaaaaaggaatagagaaaataaaaacat 5466499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 337
Target Start/End: Original strand, 20632544 - 20632628
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 337  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||||  ||| ||   |||||| ||||| ||||||||||||||    
T  20632544 atatttgtacatccaattgatgacaattttggtgacaactttatttttttctcttcctattggtcaaaaacaatggagagagaaa 20632628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 31049061 - 31048952
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| ||||||||||||||||||||||||||            ||||||||| |||| ||||||||| | ||||| ||||||||||||||| | |    
T  31049061 aagagcaatgatatttgtacatccatttaatgacaa------------ctttgtttttctctcttttgattgatcaaaaacaatggagagagaaaaagaa 31048974  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| |||||||| |||||    
T  31048973 agagagaggataataatatcat 31048952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 349
Target Start/End: Original strand, 49424708 - 49424812
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||  |||| ||||||| ||||  ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  49424708 gagcaatgatattttgacattcatttaaggacagctttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaag 49424807  T
Q  345 agaga 349  Q
    |||||    
T  49424808 agaga 49424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 55267888 - 55268008
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||||||| | |||  || |||| ||| |||||||| ||||||| |||| || | |||||| ||||  ||||||||||||||| ||||    
T  55267888 agagcaatgatatttgtacacctattccataacaactttagtgataaccttgtttttctctcttcttattggtcaaaagcaatggagagagaaaaaggaa 55267987  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  55267988 gagagaggataagatcatcat 55268008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 343
Target Start/End: Original strand, 29406972 - 29407023
Alignment:
Q  292 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  29406972 tttggttttctctattttgattggtaaaaaataatagagagagaaaaaggaa 29407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 40721900 - 40721971
Alignment:
Q  293 ttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    ||||||| |||| |||| |||||| ||||||||||||||||||||| |||| ||||| || || ||||||||    
T  40721900 ttgtttttctctttttttattggtcaaaaataatggagagagaaaaaggaagagagaggaaaagaacatcat 40721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 42177934 - 42178057
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||| | ||||||||| || || || |||| || |||||| | ||||||||||| |||| || | |||||| ||||||||| |||| |||||| |    
T  42177934 aaaagagcagtgatatttgtatattcaattgatgataactttggtaacaactttgtttttctctcttcttattggttaaaaataatagagatagaaaaag 42178033  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| |||||| |||| || |||||    
T  42178034 gaaaagagaaaataaaaatatcat 42178057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 364
Target Start/End: Original strand, 45779186 - 45779298
Alignment:
Q  240 gaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaag 339  Q
    |||||||||||| ||||||||||||| |||||||||||||||||            |||  |||| ||||||||||| ||||| |||||||||||||||     
T  45779186 gaaaagagcaatgatatttgtacatctatttaatgacaattttg------------tttctctctcttttgattggtcaaaaacaatggagagagaaaaa 45779273  T
Q  340 ggaatagagaagataataacatcat 364  Q
    | || |||||  |||||||||||||    
T  45779274 gaaagagagagaataataacatcat 45779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 610982 - 610896
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataa-ctttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||| || ||| ||||||||| |||||||| || |||  ||||  ||| |||| ||||||||||||||||||||||||||||    
T  610982 atatttgtatattcatctaatgacaactttggtgacaatcttattttttttctctttttattggtaaaaaataatggagagagaaaa 610896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 336
Target Start/End: Original strand, 4971898 - 4971992
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 336  Q
    |||||||||| ||||||||| ||  ||||||||| ||||||  ||||||||||||||| |  | ||||||||||| ||||| |||| | ||||||    
T  4971898 aaagagcaatgatatttgtatatgtatttaatgataattttaatgataactttgtttttcatttttttgattggtcaaaaacaatgaaaagagaa 4971992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 19238544 - 19238638
Alignment:
Q  56 gctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    ||||||||| || || ||||||||| |||| || ||| |||||  ||||| |||| |||||||||| | || |||||| ||||||||||||||||    
T  19238544 gctaaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggc 19238638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 45923515 - 45923446
Alignment:
Q  291 ctttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 361  Q
    |||||||||||| | ||||||||||| ||||||||||||||||||||| | || |||||  ||||||||||    
T  45923515 ctttgttttccttt-ttttgattggtcaaaaataatggagagagaaaaagaaagagagagaataataacat 45923446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 52669498 - 52669616
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 345  Q
    |||||| |||||||||||||||||| ||||| | ||| |||| ||  ||||||| |||| |||| |||||| | ||| |||||| || ||||| |||| |    
T  52669498 agcaatgatatttgtacatccattttatgaccactttagtgacaatcttgtttttctctctttttattggtcagaaacaatggaaagggaaaaaggaaga 52669597  T
Q  346 gagaagataataacatcat 364  Q
     ||||||||| | ||||||    
T  52669598 tagaagataagaccatcat 52669616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 335
Target Start/End: Original strand, 53662330 - 53662420
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    ||||||| |||| ||||||||||||| ||||||| ||| ||||||| |||||||| |||| || | ||| || ||||| |||| |||||||    
T  53662330 gagcaatgatatatgtacatccatttcatgacaactttagtgataattttgtttttctctcttcttattagtcaaaaacaatgaagagaga 53662420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 2193705 - 2193790
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||| ||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  2193705 atatttgtacatccaattgatgacaactttgatgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 2193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 349
Target Start/End: Complemental strand, 19910994 - 19910889
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||| ||| ||||||| |||| ||||| |||| || |||| |||| |  || |||| || |||||| |||||| ||||||||||||||||||||| ||||    
T  19910994 agagtaatgatatttggacattcatttgatgataactttgttgattatcttatttttctttatttttattggtcaaaaataatggagagagaaaaaggaa 19910895  T
Q  344 tagaga 349  Q
     |||||    
T  19910894 gagaga 19910889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 32365563 - 32365648
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| |||||||| |||| |||| || |||| ||||||| || |||| |||| |||| |||||| ||||| |||||||||||||||    
T  32365563 atatatgtacatctattttatgataactttgatgataacattatttttctctctttttattggtcaaaaacaatggagagagaaaa 32365648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 36513028 - 36512932
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| ||||||| | |||||||| | ||||||| | |||| |||||  |||  |||| |||| |||||||||||| |||||||||||||||    
T  36513028 aaaagagcaatgatatttgaaaatccatttga-gacaattcttgtgacaacttcttttctctctctttttattggtaaaaaacaatggagagagaaaa 36512932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 35580254 - 35580202
Alignment:
Q  284 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 336  Q
    |||| |||||| ||||||||| |||| |||||| |||||||||||||||||||    
T  35580254 gtgacaacttttttttcctctcttttcattggtcaaaaataatggagagagaa 35580202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 333
Target Start/End: Original strand, 45176665 - 45176709
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagaga 333  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||    
T  45176665 aactttgttttcctctcttttgattggtcaaaaacaatggagaga 45176709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 364
Target Start/End: Original strand, 20956514 - 20956589
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    ||||||||||| |||| ||||||||||| ||||| |||| |||||||||| | || ||| |  |||||||||||||    
T  20956514 aactttgtttttctctcttttgattggtcaaaaacaatgaagagagaaaaagaaagagaaagaataataacatcat 20956589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 43358766 - 43358703
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||  ||| ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  43358766 acaatttttatgacaactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 43358703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 44170559 - 44170626
Alignment:
Q  297 tttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||||||| ||||||||| | ||||| ||| || |||||||| |||| ||||| ||||||||||||||    
T  44170559 tttcctctcttttgattgatcaaaaacaattgacagagaaaaaggaagagagaggataataacatcat 44170626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 349
Target Start/End: Complemental strand, 9162219 - 9162145
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  9162219 acaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 9162145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 33483993 - 33484087
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||| ||||||||||||||| || ||||||| |||||||| ||| ||  ||| |||| || | |||| | ||||| |||||||||||||||    
T  33483993 agagtaatgatatttgtacatccaattgatgacaactttggtgacaaccttacttttctctcttcttattgatcaaaaacaatggagagagaaaa 33484087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 338
Target Start/End: Original strand, 47519607 - 47519701
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||| | ||||||||||||||||| ||||| || || | ||| ||| ||||||| || | || | ||| || |||||||||||||||||||||    
T  47519607 agagcagtgatatttgtacatccattgaatgataacttagttgacaaccttgtttttctttcttcttattagttaaaaataatggagagagaaaa 47519701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 278
Target Start/End: Original strand, 54165058 - 54165092
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaa 278  Q
    |||||||| ||||||||||||||||||||||||||    
T  54165058 agagcaatgatatttgtacatccatttaatgacaa 54165092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 55427167 - 55427261
Alignment:
Q  56 gctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    ||||||||| || || ||||||||  |||  || ||| |||||| ||||| |||| ||||||| || | ||||||||| ||||||||||||||||    
T  55427167 gctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggc 55427261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 282
Target Start/End: Complemental strand, 439327 - 439294
Alignment:
Q  249 aataatatttgtacatccatttaatgacaatttt 282  Q
    ||||||||||| ||||||||||||||||||||||    
T  439327 aataatatttgaacatccatttaatgacaatttt 439294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 1562468 - 1562517
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  1562468 aactttggttttctcttttttgattggtcaaaaataatagagagagaaaa 1562517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 12694316 - 12694361
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataa 290  Q
    ||||||| ||||||||| ||| || |||||||||||||||||||||    
T  12694316 gagcaatgatatttgtatatctatctaatgacaattttggtgataa 12694361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 13182515 - 13182426
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 333  Q
    |||| ||| ||||||||||||| | || ||||||| |||| ||||||  ||||||| |||| |||| |||||| ||||| ||| ||||||    
T  13182515 agagtaatgatatttgtacatcaaattgatgacaactttgatgataatcttgtttttctctttttttattggttaaaaacaatagagaga 13182426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 13267375 - 13267459
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||| ||| |||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  13267375 atatttgtaaatcgatttcat-acaactttgatgaaaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 13267459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 18568711 - 18568796
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| || | || | |||||| ||||| |||| ||||||||||    
T  18568711 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatcttcttattggtcaaaaacaatgaagagagaaaa 18568796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 20056557 - 20056472
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||  ||| ||| |||| || | |||||| ||||| ||| |||||||||||    
T  20056557 atatttgtacatccaattgatgacaactttggtgacaatcttgcttttctctcttcttattggtcaaaaacaattgagagagaaaa 20056472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 24154794 - 24154704
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 336  Q
    |||||||  ||||||||||||| ||||||||| ||||||| ||| |||| | ||||  ||| ||||  ||||| ||||| |||||||||||||    
T  24154794 agagcaacgatatttgtacatctatttaatgataattttgatgacaactatatttt--tctttttttgttggtcaaaaacaatggagagagaa 24154704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 36812335 - 36812384
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  36812335 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 36812384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 37109319 - 37109412
Alignment:
Q  57 ctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    ||||| |||||  ||||||||||  || |||| ||| |||||| |||||  ||| |||||||||| | ||||||||| ||||||||||| ||||    
T  37109319 ctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggc 37109412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 39844197 - 39844250
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||| |||||| ||||| ||||||||||||||| ||||||||||    
T  39844197 tttttctctctttttattggtcaaaaacaatggagagagaaaaaggaatagaga 39844250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 39880962 - 39881011
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  39880962 aactttggttttctctcttttgattggtcaaaaataatagagagagaaaa 39881011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 45923550 - 45923517
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgaca 277  Q
    |||||||| |||||||||||||||||||||||||    
T  45923550 agagcaatgatatttgtacatccatttaatgaca 45923517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 48743849 - 48743800
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  48743849 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 48743800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 8681116 - 8681020
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| |||   || || | |||| | ||||| ||||||||||||||| |||| |||||    
T  8681116 atatttgtacatccaattgatgacaactttggtgacaaccttgctttttcctcttcttattgatcaaaaacaatggagagagaaaaaggaagagaga 8681020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 9241030 - 9241086
Alignment:
Q  94 gaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||||||||||| |||| ||||||||||   ||| ||||| ||||||||||||||||    
T  9241030 gaacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggc 9241086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 12241196 - 12241137
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||| |||| |||| |||||||||||| |||||||| ||||||||||| |||| |||||    
T  12241196 aactttatttttctctcttttgattggta-aaaataatagagagagaaaaaggaaaagaga 12241137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 19246031 - 19245967
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||||  ||||||||| |||  |||||| |||||||||||| |||||||| |||| |||||    
T  19246031 tgataacttccttttcctctctttctattggtcaaaaataatggaaagagaaaaaggaagagaga 19245967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 29949596 - 29949680
Alignment:
Q  280 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||| ||| |||||| |||| |||| || | |||||||||||| ||| || |||||||| |||| ||||| ||||| ||||||||    
T  29949596 tttgatgacaactttctttttctctcttcttattggtaaaaaacaatagatagagaaaaaggaagagagaggataagaacatcat 29949680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 30866533 - 30866445
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 333  Q
    ||||||| ||||||| | ||||||||||||| || |||||||| || |||  ||| |||| |||| ||| || ||||||||| ||||||    
T  30866533 gagcaatgatatttggatatccatttaatgataactttggtgacaattttagttttctctctttttattagtcaaaaataatagagaga 30866445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 31413704 - 31413772
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||| ||| |||| ||| ||||| | |||| |||| |||||| ||||||||||||||||||||| ||||    
T  31413704 acaagttttgtgacaaccttgttgtgctctctttttattggtcaaaaataatggagagagaaaaaggaa 31413772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 33820269 - 33820328
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||| |||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  33820269 aactttatttttctctcttttgattggt-aaaaataatagagagagaaaaaggaaaagaga 33820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 36792481 - 36792417
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    ||||||||| |||||  |||  |||| |||| |||||| ||||||||||||||||||||| ||||    
T  36792481 ttttggtgacaacttcttttctctctcttttcattggttaaaaataatggagagagaaaaaggaa 36792417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 38952842 - 38952774
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||| ||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  38952842 acaatttttgtgataatttcttttttctcttttttcattggtcaaaaacaatggagagagaaaaaggaa 38952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 40756060 - 40756000
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| ||| ||||  |||||||||| ||||||||| ||||||||||| |||| |||||    
T  40756060 aactttgattttctcttctttgattggtcaaaaataatagagagagaaaaaggaagagaga 40756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 41119458 - 41119506
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaa 337  Q
    |||||| ||||||||| |||| |||||| ||||| ||||||||||||||    
T  41119458 aacttttttttcctctcttttcattggtcaaaaacaatggagagagaaa 41119506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 46173659 - 46173615
Alignment:
Q  306 ttttgattggtaaaaaataatggagagagaaaagggaatagagaa 350  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||    
T  46173659 ttttcattggtaaaaaacaatggagagagaaaaaggaagagagaa 46173615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 9619 - 9498
Alignment:
Q  239 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  9619 tgaaatgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaa 9520  T
Q  339 gggaatagagaagataataaca 360  Q
     |||| ||||| ||||||||||    
T  9519 aggaagagagaggataataaca 9498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 239 - 360
Target Start/End: Complemental strand, 15364848 - 15364727
Alignment:
Q  239 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  15364848 tgaaatgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtaaaaaacaatggagagagaaaa 15364749  T
Q  339 gggaatagagaagataataaca 360  Q
     |||| ||||| ||||||||||    
T  15364748 aggaagagagaggataataaca 15364727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 239 - 364
Target Start/End: Complemental strand, 15328678 - 15328553
Alignment:
Q  239 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  15328678 tgaaatgagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaa 15328579  T
Q  339 gggaatagagaagataataacatcat 364  Q
     |||| | ||| ||||||||||||||    
T  15328578 aggaagaaagaggataataacatcat 15328553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 243 - 364
Target Start/End: Original strand, 25924750 - 25924871
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||    
T  25924750 aagagcaatgatatttgtacattcatttaatgacaactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaagga 25924849  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||   |||||||||||||    
T  25924850 agagagcgaataataacatcat 25924871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 32784923 - 32784802
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||| |||||  ||||||||||||||||||||| || |||||||| |||| |||||||| || |||||||||||||| |||||| |||    
T  32784923 aagagcaatgatatttctacatttatttaatgacaattttggtgacaattttgtttttctctcttttgattagtcaaaaataatggagaaagaaaaagga 32784824  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||||||||||||    
T  32784823 agagagaggataataacatcat 32784802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 34413276 - 34413155
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||  ||| ||||||||||| ||||| ||||| ||||||||| |||    
T  34413276 aagagcaatgatatttgtacatcaatttaatgacaattttggtgacaactttgattttttctcttttgattggtcaaaaacaatggggagagaaaaagga 34413177  T
Q  343 atagagaagataataacatcat 364  Q
    | |||||  |||| ||||||||    
T  34413176 agagagagaataacaacatcat 34413155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 28965731 - 28965847
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||| ||||| |||| ||||||||||  ||| |||    
T  28965731 caatgatatatgtacatccatttaatgacaactttggtgataactttgtttctctctcttttgattggtcaaaaacaatgaagagagaaaaaagaagaga 28965830  T
Q  348 gaagataataacatcat 364  Q
    ||| ||||||| |||||    
T  28965831 gaatataataatatcat 28965847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 237286 - 237405
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||| ||||| |||||||||||| ||| |||| | ||||||||| |||| || | |||||| ||||||||||||||||||||| |||      
T  237286 gagcaatgatatttggacatctatttaatgacaacttttgtgacatctttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggatg 237385  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| ||||||||    
T  237386 agagacgataagaacatcat 237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 2881517 - 2881426
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||  |||| || | |||||| ||||||||| ||||||||    
T  2881517 agagcaatgatatttggacatccatttaatgacaactttggtgacaactttgtttctctctcttcttattggtcaaaaataatagagagaga 2881426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 254 - 355
Target Start/End: Complemental strand, 6435210 - 6435109
Alignment:
Q  254 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 353  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||| |||| || | |||||| ||||| |||||| |||||||| | || |||||||||    
T  6435210 tatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatggatagagaaaaagtaagagagaagat 6435111  T
Q  354 aa 355  Q
    ||    
T  6435110 aa 6435109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 3660244 - 3660360
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||| ||||||||||  ||| |||    
T  3660244 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatgcagagagaaaaaagaagaga 3660343  T
Q  348 gaagataataacatcat 364  Q
    |||||||| | ||||||    
T  3660344 gaagataagaccatcat 3660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 3339388 - 3339485
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||| |||||||||||||||||| ||||||| ||| |||| ||  ||||||| |||| |||| |||||| ||||| ||| ||||||||||| ||||    
T  3339388 agcaatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctctctttttattggtcaaaaacaatagagagagaaaaaggaa 3339485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 2862253 - 2862165
Alignment:
Q  247 gcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    ||||| ||||||| |||||||||||||||||| |||||||| || |||||||  |||| || | |||||| ||||||||| ||||||||    
T  2862253 gcaatgatatttggacatccatttaatgacaactttggtgacaattttgtttctctcttttcttattggtcaaaaataatagagagaga 2862165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 335
Target Start/End: Complemental strand, 1804057 - 1803962
Alignment:
Q  240 gaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    |||||||| | | ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||    
T  1804057 gaaaagagtagtgatatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagaga 1803962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 27335039 - 27334957
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| |||| |||||| ||||||||| ||||||||    
T  27335039 atatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataatagagagaga 27334957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 27395779 - 27395697
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| |||| |||||| ||||||||| ||||||||    
T  27395779 atatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctctttttattggtcaaaaataatagagagaga 27395697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 26668635 - 26668563
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 361  Q
    |||||||||||||||| ||||||||| | |||||||||  | |||||||| |||| ||||| |||||||||||    
T  26668635 aactttgttttcctctcttttgattgatcaaaaataataaaaagagaaaaaggaagagagaggataataacat 26668563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 2056970 - 2056847
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| |||||||||||| ||||  ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| |||||| ||||||||      
T  2056970 aaaagagcaatgatatttgtacattcattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggatagagaaaaaa 2056871  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  2056870 gaagagagaggataagaccatcat 2056847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 355
Target Start/End: Complemental strand, 12441702 - 12441600
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||||||| | || ||||||| |||||||| ||| ||| ||| |||| || | || ||| ||||| ||||||||||||||| | || ||||||||    
T  12441702 atatttgtacatctaattgatgacaactttggtgacaaccttgcttttctctcttcttatcggttaaaaacaatggagagagaaaaagtaagagagaaga 12441603  T
Q  353 taa 355  Q
    |||    
T  12441602 taa 12441600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 17902581 - 17902699
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 345  Q
    |||||| ||||||||||||| |||  ||||||| ||| |||||||  ||||||| |||| || | |||||| ||||| |||||||||| ||||  ||| |    
T  17902581 agcaatgatatttgtacatctattccatgacaactttagtgataatattgtttttctctcttcttattggtcaaaaacaatggagagataaaaaagaaga 17902680  T
Q  346 gagaagataataacatcat 364  Q
    |||| ||||| | ||||||    
T  17902681 gagaggataagaccatcat 17902699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 349
Target Start/End: Complemental strand, 11017566 - 11017461
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||| | |||||||||||||||||  || |||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||||||||||| ||||    
T  11017566 agagcagtgatatttgtacatccattccataacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 11017467  T
Q  344 tagaga 349  Q
     |||||    
T  11017466 aagaga 11017461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 31368501 - 31368615
Alignment:
Q  246 agcaataatatttgtacatccattt---aatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    |||||| ||||||||||||||||||   |||||||| |||||||| ||||||||||       |||| |||||||||||| ||| || ||||||||  ||    
T  31368501 agcaatgatatttgtacatccatttatgaatgacaactttggtgacaactttgttt-------tttttattggtaaaaaacaatagatagagaaaaatga 31368593  T
Q  343 atagagaagataataacatcat 364  Q
    | ||| | ||||||||||||||    
T  31368594 agagataggataataacatcat 31368615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 17835777 - 17835697
Alignment:
Q  263 atccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||||| ||||| |||  ||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  17835777 atccatttaaggacaactttaatgacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaaggaa 17835697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 21210442 - 21210346
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||| |||||| |||||||| | |||||||| || | ||| ||| ||||||| |||| || | |||| | ||||| |||||||||||||||    
T  21210442 aaagagcaatgatatttatacatccagtgaatgacaacttagttgacaaccttgtttttctctcttcttattgattaaaaacaatggagagagaaaa 21210346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 2886737 - 2886694
Alignment:
Q  306 ttttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||    
T  2886737 ttttcattggtaaaaaacaatggagagagaaaaaggaatagaga 2886694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 349
Target Start/End: Complemental strand, 9954737 - 9954627
Alignment:
Q  239 tgaaaagagcaataatatttgtacatccatttaatgacaa-ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 337  Q
    ||||||||| | | ||||||| ||| ||||||||| |||| ||||||||| |||||  | || |||| |||| |||||| ||||| ||||||||||||||    
T  9954737 tgaaaagaggagtgatatttgaacaaccatttaat-acaacttttggtgacaacttcttctttctctcttttcattggttaaaaacaatggagagagaaa 9954639  T
Q  338 agggaatagaga 349  Q
    | |||| |||||    
T  9954638 acggaagagaga 9954627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 11635783 - 11635707
Alignment:
Q  260 tacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| | |||||||||| ||| |||| ||||||  | | |||| |||||| |||||||||||||||||||||    
T  11635783 tacatccatttgaagacaattttgatgacaactctgtttt--tttttttttattggtcaaaaataatggagagagaaaa 11635707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 33549184 - 33549121
Alignment:
Q  85 gagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccag 148  Q
    |||| ||| |||||| ||||| |||| |||||||||| | ||||||||| ||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccag 33549121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 12234502 - 12234568
Alignment:
Q  84 ggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    ||||| ||| |||||| ||||| ||||| ||||||||| | ||||||||| | ||||||||||||||    
T  12234502 ggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggc 12234568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 29376607 - 29376697
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||||||||||||| ||||| ||||||||||| ||| |||  |||||| |||| || | |||||| | ||| |||||||| ||||||    
T  29376607 caatgatatttgtacatctatttagtgacaattttgatgacaaccatgttttgctctcttcttattggttataaacaatggagaaagaaaa 29376697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 1688269 - 1688354
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||| ||||||  |||||||| |  ||| |||||  ||||||||| |||| |||||| ||||| |||||||||||||||    
T  1688269 atatttgaacaaccattttttgacaattatcttgacaacttctttttcctctctttttattggttaaaaacaatggagagagaaaa 1688354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 294
Target Start/End: Complemental strand, 2689127 - 2689086
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataacttt 294  Q
    ||||||| |||||||||||||||||||||| |||| ||||||    
T  2689127 atatttgaacatccatttaatgacaatttttgtgacaacttt 2689086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 338
Target Start/End: Complemental strand, 4923108 - 4923036
Alignment:
Q  266 catttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||| ||||||| |||  |||||| |||||||| |||| || | |||||| ||||||||| |||||||||||    
T  4923108 catttgatgacaacttttatgataattttgtttttctctcttcttattggttaaaaataattgagagagaaaa 4923036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 16533204 - 16533252
Alignment:
Q  301 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  16533204 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 16533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 24437592 - 24437529
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    ||||| ||| |||||| ||||||||| |||| |||||| ||||| ||||||||||||||| ||||    
T  24437592 ttttgatgacaacttt-ttttcctctttttttattggttaaaaacaatggagagagaaaaaggaa 24437529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 40478175 - 40478294
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||| |||||||||| ||||     
T  40478175 gagcaatgatatttgtacatccatttaatgacaattttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaag 40478274  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||||||||||||    
T  40478275 agagaggataataacatcat 40478294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 41877871 - 41877752
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||| ||||||||||||||| ||||     
T  41877871 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctcttttttgattggtcaaaaacaatggagagagaaaaaggaag 41877772  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||||||||||||    
T  41877771 agagaggataataacatcat 41877752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 45295624 - 45295746
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||||| |||| |||||||||| ||    
T  45295624 aaagagcaatgatatttgtacatccatttaatgacagctttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgtagagagaaaaagg 45295723  T
Q  342 aatagagaagataataacatcat 364  Q
    || ||||| ||||||||||||||    
T  45295724 aagagagaggataataacatcat 45295746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 25542867 - 25542975
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||||||||||||||||| || ||| |||| ||||||| |||||||| ||||||||||| ||||| |||| |||||||||| |||| ||||| ||    
T  25542867 atatttgtacatccatttaatgataactttagtgacaactttggtttcctctcttttgattggtcaaaaacaatgaagagagaaaaaggaagagagagga 25542966  T
Q  353 taataacat 361  Q
    |||||||||    
T  25542967 taataacat 25542975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 31007233 - 31007359
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgat---aactttgttttcctctattttgattggtaaaaaataatggagagagaaa 337  Q
    ||||||||||| |||||||||||| |||||||||| || ||||||| |   |||||||||||||||| ||||||||||| ||||| |||| | |||||||    
T  31007233 aaaagagcaatcatatttgtacattcatttaatgataactttggtggtgacaactttgttttcctctcttttgattggttaaaaacaatgaaaagagaaa 31007332  T
Q  338 agggaatagagaagataataacatcat 364  Q
    | |||| ||||| ||||||||||||||    
T  31007333 aaggaagagagaggataataacatcat 31007359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 246 - 364
Target Start/End: Complemental strand, 42718301 - 42718185
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 345  Q
    |||||| |||| ||||||| |||||||||||||||||||||| ||||||||||  |||| ||||||||||| ||||| |||| ||||||||||  ||| |    
T  42718301 agcaatgatatatgtacattcatttaatgacaattttggtgacaactttgttt--ctctcttttgattggtcaaaaacaatgaagagagaaaaaagaaaa 42718204  T
Q  346 gagaagataataacatcat 364  Q
    ||||| |||||||||||||    
T  42718203 gagaatataataacatcat 42718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 367
Target Start/End: Complemental strand, 14992259 - 14992134
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataat--ggagagagaaaaggg 341  Q
    |||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||  ||| ||||||||||| ||| | |||   ||||||||| | ||    
T  14992259 agagaaatgatatttgtacatccatttaatgacaactttggtgacaactttgttttattcttttttgattggtcaaacacaataaagagagagaacaagg 14992160  T
Q  342 aatagagaagataataacatcatctg 367  Q
    || ||||| |||||||||||||||||    
T  14992159 aaaagagaggataataacatcatctg 14992134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 364
Target Start/End: Complemental strand, 25142782 - 25142692
Alignment:
Q  274 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    ||||| ||||||||| ||||||||||||||| |||| |||||| ||||| ||||||||||||||| |||| ||||| ||||||||||||||    
T  25142782 gacaactttggtgattactttgttttcctctcttttaattggtcaaaaacaatggagagagaaaaaggaagagagaggataataacatcat 25142692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 52453980 - 52454099
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||||||||||  |||| || | |||||| ||||| ||||||||||||||| ||||     
T  52453980 gagcaatgatatttgtacatccatttcatgacaactttagtgacaactttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 52454079  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  52454080 agagaggataagaccatcat 52454099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 34021348 - 34021470
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||| ||||||||||| ||    
T  34021348 aaagagcaatgatatttgtacatccattccatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatagagagagaaaaagg 34021447  T
Q  342 aatagagaagataataacatcat 364  Q
    || ||||| ||||| | ||||||    
T  34021448 aagagagaggataagaccatcat 34021470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 35756163 - 35756053
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||| ||||||| |||||||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||  |||     
T  35756163 gagcaatcatatttgtacatctatttcatgacaactttggtgacaactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaatgaag 35756064  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  35756063 agagatgataa 35756053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 364
Target Start/End: Complemental strand, 11327297 - 11327172
Alignment:
Q  239 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||| |||||||||||    
T  11327297 tgaaaagagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagagagaaaa 11327198  T
Q  339 gggaatagagaagataataacatcat 364  Q
     |||| ||||| ||||| | ||||||    
T  11327197 aggaagagagaggataagaccatcat 11327172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 13159845 - 13159725
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  13159845 agagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 13159746  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  13159745 gagagacgataagaccatcat 13159725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 43900957 - 43900862
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||| ||||||  |||||||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| |||||||||||||||||||||    
T  43900957 aagagcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaataatggagagagaaaa 43900862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 50879782 - 50879659
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||| ||| |||||||||||||||||  ||||||| ||| |||| ||||||||| | |||| || | |||||| ||| | ||||||||||||||| |    
T  50879782 aaaagagaaatgatatttgtacatccattccatgacaactttagtgacaactttgttgttctctcttcttattggtcaaacacaatggagagagaaaaag 50879683  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||||||||| | ||||||    
T  50879682 gaagagagaagataagaccatcat 50879659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 50279971 - 50280085
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| |||||||||||||||||| ||||||| |||  ||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| |    
T  50279971 aaaagagcaatgatatttgtacatccatttcatgacaactttaatgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaag 50280070  T
Q  341 gaatagagaagataa 355  Q
    ||| ||||| |||||    
T  50280071 gaagagagaggataa 50280085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 28263730 - 28263609
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||| ||||||||| ||||||| ||| |||| |||||| |||| || | || | |||||| ||||| ||||||||||||||| |||    
T  28263730 aagagcaatgatatttgttcatccatttcatgacaactttagtgacaactttatttttctttcttcttattggtcaaaaacaatggagagagaaaaagga 28263631  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  28263630 agagagaggataagaccatcat 28263609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 30400041 - 30400154
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| ||    
T  30400041 aaagagcaattatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagg 30400140  T
Q  342 aatagagaagataa 355  Q
    || ||||| |||||    
T  30400141 aagagagaggataa 30400154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 54233397 - 54233482
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  54233397 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 54233482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 8254211 - 8254091
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||||||||| ||||||||||| |||| ||| || |||  |||| || | || ||  ||||| ||||||||||||||| ||||    
T  8254211 agagcaatgatatttgtacatccatttcatgacaattttagtgacaacattatttctctctcttcttatcggctaaaaacaatggagagagaaaaaggaa 8254112  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  8254111 gagagatgataagaccatcat 8254091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 355
Target Start/End: Complemental strand, 36819141 - 36819029
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    |||| |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  ||    
T  36819141 aagaacaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatga 36819042  T
Q  343 atagagaagataa 355  Q
    | ||||| |||||    
T  36819041 agagagaggataa 36819029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 23163029 - 23163152
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| ||||||  ||||| |||  ||||||||||| |||| || |||||||| |||| || | |||||| ||||| |||| |||||||||| |    
T  23163029 aaaagagcaatgatatttagacatcaattccatgacaattttagtgacaattttgtttttctcttttcttattggtcaaaaagaatgaagagagaaaaag 23163128  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  23163129 gaagagagaggataagaccatcat 23163152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 2009829 - 2009744
Alignment:
Q  252 aatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||||||| ||||| |||||| |||||||| ||| ||| ||| |||| || | |||||| |||||||||||||||||||||    
T  2009829 aatatttgtacatcaattta-tgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaataatggagagagaaaa 2009744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 23906883 - 23906968
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| |||| || | |||||| ||||| |||||||||||||||    
T  23906883 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttattggtcaaaaacaatggagagagaaaa 23906968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 367
Target Start/End: Complemental strand, 44855433 - 44855312
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 345  Q
    |||||| ||||||||||||| |||| ||||||| ||| |||| ||  || |||| |||| || | |||||| ||||| ||||||||||||||| |||| |    
T  44855433 agcaatgatatttgtacatcaatttcatgacaactttagtgacaatcttatttttctctcttcttattggttaaaaaaaatggagagagaaaaaggaaga 44855334  T
Q  346 gagaagataataacatcatctg 367  Q
    || | ||||| |||||| ||||    
T  44855333 gaaatgataagaacatcgtctg 44855312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 51717616 - 51717531
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| |||| || |  |||||||||||||||||||||| ||||    
T  51717616 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctctcttcttgttggtaaaaaataatggagagaaaaaa 51717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 364
Target Start/End: Complemental strand, 20714423 - 20714307
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||||||||||||||  |||| |||||| |||| ||| || |||| || | || | |||||| ||||| ||||||||||||||| |||| |||    
T  20714423 caatgatatttgtacatccattccatgataattttagtgacaaccttatttttctatcttcttattggtcaaaaacaatggagagagaaaaaggaagaga 20714324  T
Q  348 gaagataataacatcat 364  Q
    || ||||| | ||||||    
T  20714323 gaggataagaccatcat 20714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 46344598 - 46344478
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||| ||||| | ||||| ||| |||| ||| || |||| || | || | |||||| |||||||||||||| |||||| ||||    
T  46344598 agagcaatgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaaataatggagaaagaaaaaggaa 46344499  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  46344498 gagagaggataagaccatcat 46344478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 53102786 - 53102894
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||| ||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||| | ||||| |||||||||| |||| |    
T  53102786 aaaagggcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagagaaaaaaag 53102885  T
Q  341 gaatagaga 349  Q
    ||| |||||    
T  53102886 gaagagaga 53102894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 3957906 - 3958025
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  | ||||| ||| |||| ||| ||||||| || | || | ||| || ||||| ||||||||||||||| ||||     
T  3957906 gagcaatgatatttgtacatccattccaggacaactttagtgacaaccttgtttttctatcttcttatttgtcaaaaacaatggagagagaaaaaggaag 3958005  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  3958006 agagaggataagaccatcat 3958025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 43441845 - 43441760
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| ||||  || ||| ||  ||| |||| |||| |||||| |||||||||||||||||||||    
T  43441845 atatttgtacatccaattgatgacaactttgacgacaaccttacttttctctttttttattggtcaaaaataatggagagagaaaa 43441760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 50652563 - 50652458
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||||||  | || |||||||||||| ||| || |||| ||| |||| || | |||||| ||||| ||||||||||| ||| |||| ||||| ||    
T  50652563 atatttgtacatttaattgatgacaattttgatgacaattttgcttttctctcttcttattggtcaaaaacaatggagagagtaaaaggaagagagagga 50652464  T
Q  353 taataa 358  Q
    ||||||    
T  50652463 taataa 50652458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 3069462 - 3069582
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||| |||||||||  ||||||| ||| |||  ||  ||||||| |||| || | |||||| ||||| |||||||||||| || ||||    
T  3069462 agagcaatgatatttgcacatccattccatgacaactttagtgggaatcttgtttttctctcttcttattggtcaaaaacaatggagagagataaaggaa 3069561  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  3069562 gagagaggataagaccatcat 3069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 7039123 - 7039174
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgtt 297  Q
    |||||| |||||||||| ||||||| ||||||||||| |||||||| |||||    
T  7039123 agcaatgatatttgtacttccatttcatgacaattttagtgataaccttgtt 7039174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 21960615 - 21960568
Alignment:
Q  101 agaccccgagaaggagcacacactcaggtcccaggccaataccaccag 148  Q
    ||||| |||| |||||||||| ||||||||||| ||||||||||||||    
T  21960615 agacctcgaggaggagcacactctcaggtcccaagccaataccaccag 21960568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 338
Target Start/End: Original strand, 32687882 - 32687941
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||||||||  |||| |||| |||| |||||| ||||| |||||||||||||||    
T  32687882 ttttggtgataacttcttttttctctcttttcattggttaaaaacaatggagagagaaaa 32687941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 335
Target Start/End: Original strand, 32931809 - 32931896
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    |||| |||||||||||||||||| |  |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||    
T  32931809 caatgatatttgtacatccatttcacaacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagaga 32931896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 37303013 - 37303072
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||| ||||    
T  37303013 tttttctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagagaaaataa 37303072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 138
Target Start/End: Original strand, 44743817 - 44743904
Alignment:
Q  51 aagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggcca 138  Q
    |||| |||||||||||| || ||||||||  | ||||||||| |||||| ||||| |||| |||||||||| | ||| ||||| ||||    
T  44743817 aagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 355
Target Start/End: Original strand, 47056421 - 47056524
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggt-aaaaaataatggagagagaaaagggaatagagaag 351  Q
    ||||||||||||||| || |||||||||||| ||| ||| ||  ||| |||| |||  |||||| |||||  ||| ||||||||||| |||| |||||||    
T  47056421 atatttgtacatccagttgatgacaattttgatgacaaccttacttttctctctttctattggtcaaaaaccaattgagagagaaaaaggaagagagaag 47056520  T
Q  352 ataa 355  Q
    ||||    
T  47056521 ataa 47056524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 338
Target Start/End: Complemental strand, 47484432 - 47484369
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||| | |||||||||||| | |||| |||| |||||| ||||| |||||||||||||||    
T  47484432 acaatttttgggataactttgttgtgctctcttttcattggtcaaaaacaatggagagagaaaa 47484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 3483263 - 3483209
Alignment:
Q  284 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| |||||| |||| |||| |||| |||| |||||||||||||||||||||||    
T  3483263 gtgacaactttttttttctctcttttcattgataaaaaataatggagagagaaaa 3483209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 7949927 - 7949873
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||| |||| |||| ||||||||||| ||||| ||||||||||||||| ||||    
T  7949927 aactttatttttctctcttttgattggttaaaaaaaatggagagagaaaaaggaa 7949873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 2667942 - 2667877
Alignment:
Q  85 gagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||||||| |||||| ||||| |||| | |||||||| | ||| ||||| ||||||||||||||||    
T  2667942 gagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggc 2667877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 4844473 - 4844570
Alignment:
Q  51 aagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccag 148  Q
    |||| ||||||||| || || ||||||||  ||||||| ||| || ||| ||||| |||| |||||||||| | ||| ||||| | ||||||||||||    
T  4844473 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccag 4844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 4870169 - 4870266
Alignment:
Q  51 aagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccag 148  Q
    |||| ||||||||| || || ||||||||  ||||||| ||| || ||| ||||| |||| |||||||||| | ||| ||||| | ||||||||||||    
T  4870169 aagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccag 4870266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 9028047 - 9027963
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||| |||||| || || ||||| |||| ||||| ||||  ||||||||| |||||| ||||| |||||||||||||||    
T  9028047 atatttgaacaaccatttgat-acgatttttgtgacaacttcgtttctctctatttttattggtcaaaaacaatggagagagaaaa 9027963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 26280016 - 26279963
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  26280016 ttttcctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 26279963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 349
Target Start/End: Original strand, 27162358 - 27162459
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||| ||||| |||||| |||||| |||  ||| ||||||  ||| || | |||| |||||| |||||||||||||||| |||| |||| |||    
T  27162358 caatgatatttctacattcatttattgacaactttattgacaactttacttttctatctttttattggttaaaaataatggagagaaaaaaaggaagaga 27162457  T
Q  348 ga 349  Q
    ||    
T  27162458 ga 27162459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 32457694 - 32457747
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  32457694 tttttctctcttttcattggttaaaaataatggagagagaaaaaggaagagaga 32457747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 340
Target Start/End: Original strand, 38957402 - 38957499
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||| ||||||||| ||| ||||||||| || ||| | |||||   | ||||  ||| |||| |||||| |||||||||||||| ||||||||    
T  38957402 aagagcaatgatatttgtatatctatttaatgataactttagcgataatcatatttttttctctttttattggtcaaaaataatggagaaagaaaagg 38957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 1208120 - 1208025
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||||||||| || ||| ||| |||||||| ||||||| ||| |||| || | |||  ||||||| ||||||| ||||||| |||| |||||    
T  1208120 atatttgtacatccaattgatgtcaactttggtgacaactttgattttctctcttcttattaataaaaaacaatggag-gagaaaaaggaaaagaga 1208025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 338
Target Start/End: Complemental strand, 1765515 - 1765483
Alignment:
Q  306 ttttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||||||||||||||||||||||||||||    
T  1765515 ttttcattggtaaaaaataatggagagagaaaa 1765483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 11173636 - 11173529
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||| ||||||||||| ||| |||||| || |||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||  ||||||||| |    
T  11173636 aaaagagtaataatatttgaacaaccatttgat-acaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatgttgagagaaaaag 11173538  T
Q  341 gaatagaga 349  Q
    ||| |||||    
T  11173537 gaagagaga 11173529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 20080082 - 20080122
Alignment:
Q  254 tatttgtacatccatttaatgacaattttggtgataacttt 294  Q
    |||||| |||||||||||||||||||||| |||| ||||||    
T  20080082 tatttgaacatccatttaatgacaatttttgtgacaacttt 20080122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 23183606 - 23183686
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaata 324  Q
    |||| ||| ||||||||||||||||||||||| || |||||||| || |||   || ||||| ||| |||||| |||||||    
T  23183606 agagaaatgatatttgtacatccatttaatgataactttggtgacaattttaaatttctctagttttattggtcaaaaata 23183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Complemental strand, 33007515 - 33007439
Alignment:
Q  274 gacaattttggtgataactt-tgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||| ||||| | |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  33007515 gacaatttttgtgacaacttctttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 33007439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 42864202 - 42864246
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtga 287  Q
    ||||||||| ||||||||||||| || ||||||||| ||||||||    
T  42864202 aagagcaatgatatttgtacatctatctaatgacaactttggtga 42864246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 49131028 - 49130933
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| |||||||||| | ||||||||| |||| |||||  |||  |||| |||| ||| || ||||| ||||||||||||||| |||| |||||    
T  49131028 atatttgaacatccatttga-gacaatttttgtgacaacttcttttctctctcttttcattagtcaaaaacaatggagagagaaaaaggaagagaga 49130933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 52678521 - 52678557
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaa 321  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  52678521 tgataactttgtttttctctattttgattggttaaaa 52678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 245 - 365
Target Start/End: Original strand, 7077227 - 7077347
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||||     
T  7077227 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtcaaaaataatggagagagaaaaaggaag 7077326  T
Q  345 agagaagataataacatcatc 365  Q
    || || ||||| |||||||||    
T  7077327 agtgaggataacaacatcatc 7077347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 30574261 - 30574384
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |    
T  30574261 aaaagagcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaag 30574360  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  30574361 gaagagagatgataagaccatcat 30574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 36548265 - 36548387
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||| ||||||||| |||| ||| ||| ||||||| ||||||||| |||| |  |||| ||||||||||||||| ||    
T  36548265 aaagagcaatgatatttgtacatccatctaatgacaactttgatgacaaccttgtttttctctatttttattgattgaaaacaatggagagagaaaaagg 36548364  T
Q  342 aatagagaagataataacatcat 364  Q
    || ||||| ||||||| ||||||    
T  36548365 aagagagaggataatagcatcat 36548387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 19272044 - 19271923
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| ||||||||||||| |||  ||||||||||| |||||||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||    
T  19272044 aagagcaatgatatttgtacatctattatatgacaattttagtgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagga 19271945  T
Q  343 atagagaagataataacatcat 364  Q
    | ||| | ||||| ||||||||    
T  19271944 agagaaaggataagaacatcat 19271923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 26685874 - 26685755
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| ||||||||| || |||||| | || ||||||||||||| ||||||| | | ||||| |||| | |||||||| ||||     
T  26685874 gagcaatgatatttgtacatctatttaatgataactttggtcacaattttgttttcctctcttttgatcgattaaaaacaatgaaaagagaaaaaggaag 26685775  T
Q  345 agagaagataataacatcat 364  Q
    ||||||||||||||||||||    
T  26685774 agagaagataataacatcat 26685755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 26955605 - 26955486
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| ||||||||| || |||||| | || ||||||||||||| ||||||| | | ||||| |||| | |||||||| ||||     
T  26955605 gagcaatgatatttgtacatctatttaatgataactttggtcacaattttgttttcctctcttttgatcgattaaaaacaatgaaaagagaaaaaggaag 26955506  T
Q  345 agagaagataataacatcat 364  Q
    ||||||||||||||||||||    
T  26955505 agagaagataataacatcat 26955486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 240 - 364
Target Start/End: Complemental strand, 12512981 - 12512857
Alignment:
Q  240 gaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaag 339  Q
    |||||||||||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||     
T  12512981 gaaaagagcaatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaa 12512882  T
Q  340 ggaatagagaagataataacatcat 364  Q
    |||| ||||| ||||| | ||||||    
T  12512881 ggaagagagaggataagaccatcat 12512857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 248 - 364
Target Start/End: Complemental strand, 32634888 - 32634772
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||||||||||||||  ||||||||||| ||||||| |||||||| |||| || | |||||||||||| | |||||||||||||  ||| |||    
T  32634888 caatgatatttgtacatccattccatgacaattttagtgataattttgtttttctcttttcttattggtaaaaaacattggagagagaaaaatgaaaaga 32634789  T
Q  348 gaagataataacatcat 364  Q
    || ||||| | ||||||    
T  32634788 gaggataagaccatcat 32634772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 3263396 - 3263515
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| | ||     
T  3263396 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaagaaag 3263495  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  3263496 agagaggataagaccatcat 3263515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 15622227 - 15622108
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  15622227 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 15622128  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  15622127 agagaggataagaccatcat 15622108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 38011059 - 38010936
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| ||||||||||||| |||  ||||||||||| |||| || ||||||||  ||| || | |||||| ||||| ||||||||||||||| |    
T  38011059 aaaagagcaatgatatttgtacatctattccatgacaattttagtgacaattttgtttttttctcttcttattggtcaaaaacaatggagagagaaaaag 38010960  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  38010959 gaagagagaggataagaccatcat 38010936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 11464008 - 11464121
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||||  || |||| ||| |||| ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||  |    
T  11464008 aaagagcaatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctctttttattggtcaaaaacaatggagagagaaaaatg 11464107  T
Q  342 aatagagaagataa 355  Q
    || ||||| |||||    
T  11464108 aagagagatgataa 11464121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 12417811 - 12417690
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| ||||||||||||| |||| | ||||| |||||||| |||||||| || |||| || |  ||||| ||||| |||||||||||||||  ||    
T  12417811 aagagcaatgatatttgtacatctatttcacgacaactttggtgacaactttgtgtttctctcttctttttggttaaaaacaatggagagagaaaaatga 12417712  T
Q  343 atagagaagataataacatcat 364  Q
    ||| ||| ||||| ||||||||    
T  12417711 atacagaggataacaacatcat 12417690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 31006196 - 31006123
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||| |||| ||||| ||||||||||||||    
T  31006196 aactttgttttcctctattttgattggtcaaaaataatg--aagagaaaaaggaagagagaggataataacatcat 31006123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 30776804 - 30776709
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||| ||||||||||||  |||| ||||||| ||| |||| || |||||||  |||| |||| ||||||||||||||||||||||| ||||    
T  30776804 aagagcaatgatatttgtacatttatttcatgacaaatttagtgacaaatttgtttctctctctttttattggtaaaaaataatggagagaaaaaa 30776709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 242 - 364
Target Start/End: Complemental strand, 35972756 - 35972638
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||| ||| || |||| |||| |||| |||| | ||||||||||||||||||||| |     
T  35972756 aaagagcaatcatatttgtacatcaatttattgataattttggtgacaaccttatttt-ctctctttttattgat-aaaaataatggagagagaaaaagc 35972659  T
Q  342 aatagagaagataataacatcat 364  Q
    || |||||  |||||||||||||    
T  35972658 aagagaga--ataataacatcat 35972638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 4292967 - 4292873
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||| ||||||| |||| ||||| |||||||||||| ||| ||||||||||| ||||||| | |||||| ||||| || ||||||||||||    
T  4292967 agagtaatgatatttggacattcatttgatgacaattttgttgacaactttgtttttctctattcttattggtcaaaaacaacggagagagaaaa 4292873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 355
Target Start/End: Original strand, 3154528 - 3154641
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||| ||| ||||||||||||  | || |||||||||||||||| |||||| |||| |||| |||| ||| || ||||| |||||||||||||||  |    
T  3154528 aaagagtaatgatatttgtacatttaattgatgacaattttggtgacaactttatttttctctctttttattagttaaaaaaaatggagagagaaaaatg 3154627  T
Q  342 aatagagaagataa 355  Q
    || ||||| |||||    
T  3154628 aagagagatgataa 3154641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 8959335 - 8959250
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| ||||| || ||| ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  8959335 atatttgtacatccaattgatgacaactttggcgacaaccttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 8959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 364
Target Start/End: Complemental strand, 9594667 - 9594542
Alignment:
Q  239 tgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| |||||||||||||||||  ||||||| ||| |||| ||| || |||  |||| || | |||||| ||||| |||||||||||||||    
T  9594667 tgaaaagagcaatgatatttgtacatccattccatgacaactttagtgacaaccttatttctctctcttcttattggtcaaaaacaatggagagagaaaa 9594568  T
Q  339 gggaatagagaagataataacatcat 364  Q
     | || ||||| ||||| | ||||||    
T  9594567 agaaagagagaggataagaccatcat 9594542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 268 - 364
Target Start/End: Complemental strand, 28501777 - 28501681
Alignment:
Q  268 tttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||| |||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||||    
T  28501777 tttagtgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagagagatgataagaacatcat 28501681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 33823585 - 33823701
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | || |||    
T  33823585 caatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagaga 33823684  T
Q  348 gaagataataacatcat 364  Q
    || ||||| | ||||||    
T  33823685 gaggataagaccatcat 33823701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 9596702 - 9596821
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||| ||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  9596702 gagcaatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 9596801  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  9596802 agagaggataagaccatcat 9596821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 41192726 - 41192651
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    ||||||||||| |||| ||||||||||| ||||| ||||||||||||||| |||| || || ||||| ||||||||    
T  41192726 aactttgtttttctctcttttgattggtcaaaaacaatggagagagaaaaaggaagagtgaggataacaacatcat 41192651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 22920377 - 22920499
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    ||||||| || ||||||||||||| |||  ||||||| | | |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  |    
T  22920377 aaagagcgatgatatttgtacatctattacatgacaactatagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatg 22920476  T
Q  342 aatagagaagataataacatcat 364  Q
    || ||||| ||||| ||||||||    
T  22920477 aagagagatgataagaacatcat 22920499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 17489523 - 17489438
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||  ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  17489523 atatttgtacatccaattgatgacaactttggtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 17489438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 4954649 - 4954530
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||| ||||||||||  || |||| ||| |||| ||| ||||||| |||| || | || ||| ||||| ||||||||||||||| ||||     
T  4954649 gagcaatgatatttctacatccattctataacaactttagtgacaaccttgtttttctctcttcttatgggtcaaaaacaatggagagagaaaaaggaag 4954550  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  4954549 agagaggataagaccatcat 4954530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 10522958 - 10522848
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||| || ||||  || | || ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| ||||     
T  10522958 gagcaatgatatttgtatattcattccataataactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaag 10522859  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  10522858 agagaggataa 10522848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 349
Target Start/End: Complemental strand, 34381163 - 34381091
Alignment:
Q  277 aattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||| |||| ||||| ||||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  34381163 aatttttgtgacaacttcgtttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 34381091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 12401365 - 12401282
Alignment:
Q  255 atttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||||||||| ||||||| ||| |||| ||| || |||| |||| || | |||||| ||||| |||||||| ||||||    
T  12401365 atttgtacatccatttcatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatggagacagaaaa 12401282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 25345521 - 25345402
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  || |||||||| |||| ||  || |||| |||| || | |||||| ||||| |||  |||||||||| ||||     
T  25345521 gagcaatgatatttgtacatccattccataacaattttagtgacaatcttatttttctctcttcttattggtcaaaaacaataaagagagaaaaaggaag 25345422  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  25345421 agagatgataagaccatcat 25345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 10232648 - 10232578
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||||  |||| |||| |||| |||||| |||| |||||||||||||||| |||| |||||    
T  10232648 ttttggtgacaacttcttttttctctcttttcattggttaaaattaatggagagagaaaaaggaagagaga 10232578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 12661869 - 12661939
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||||  |||| |||| |||| |||||| |||| |||||||||||||||| |||| |||||    
T  12661869 ttttggtgacaacttcttttttctctcttttcattggttaaaattaatggagagagaaaaaggaagagaga 12661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 34888884 - 34888846
Alignment:
Q  240 gaaaagagcaataatatttgtacatccatttaatgacaa 278  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  34888884 gaaaagagaaataatatttgaacatccatttaatgacaa 34888846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 372616 - 372701
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || |||| ||||||||||| ||| ||| ||| || | |||| ||| || ||||| |||| ||||||||||    
T  372616 atatttgtacatccaattgatgataattttggtgacaaccttgcttttctatctttttattagtcaaaaacaatgaagagagaaaa 372701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 14914544 - 14914460
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||||||||||| || | || |||| ||| |||||||||||  ||| || | |||||| ||||| |||||||||||||||    
T  14914544 atatttgtacatccatttcat-ataactttgatgacaactttgtttttatctcttcttattggtcaaaaacaatggagagagaaaa 14914460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 20719912 - 20719996
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| |||||||||| | ||||| ||| |||| |||||  |||  |||| |||| |||||| |||||||||||||||||||||    
T  20719912 atatttgaacatccatttga-gacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaataatggagagagaaaa 20719996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 25038223 - 25038150
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataa 358  Q
    ||||||||||  |||  ||| ||||||||||| ||||||||| ||||||||||| |||| |||||  |||||||    
T  25038223 tgataactttagttttatctcttttgattggttaaaaataatagagagagaaaaaggaagagagagaataataa 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 31006228 - 31006195
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaa 278  Q
    ||||||| ||||||||||||||||||||||||||    
T  31006228 gagcaatgatatttgtacatccatttaatgacaa 31006195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 32873081 - 32873130
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| |||||||||||||||| ||||  ||| |||||||||||    
T  32873081 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaa 32873130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 16553640 - 16553568
Alignment:
Q  292 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    ||||||||  ||| ||||||||| | ||||| ||||||||||||||| |||| ||| || |||| ||||||||    
T  16553640 tttgtttttatctcttttgattgatcaaaaacaatggagagagaaaaaggaagagaaaatataacaacatcat 16553568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 36415994 - 36416054
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| ||| |||| ||||||||||| ||||||| | ||||||||||| |||| |||||    
T  36415994 aactttggttttctctcttttgattggtcaaaaatactagagagagaaaaaggaagagaga 36416054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 39595448 - 39595353
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| ||| |||||| || |||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  39595448 atatttgaacaaccatttgat-acaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 39595353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 7e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 237 - 364
Target Start/End: Original strand, 33881585 - 33881712
Alignment:
Q  237 attgaaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaa 336  Q
    ||||||| ||||||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| |||  | ||||||    
T  33881585 attgaaatgagcaatgatatttgtacattcatttaatgataattttggtgacaactttgttttcctctcttttgattggtaaaaaacaataaaaagagaa 33881684  T
Q  337 aagggaatagagaagataataacatcat 364  Q
    || |||| ||||| ||||||||||||||    
T  33881685 aaaggaagagagaggataataacatcat 33881712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 245 - 390
Target Start/End: Complemental strand, 5901069 - 5900926
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||| ||||||| ||| |||||||  || |||| |||| || | ||| |||||||||||||||||||||||| | ||     
T  5901069 gagcaatgatatttgtacatcaatttcatgacaactttagtgataatcttatttttctcttttgttattagtaaaaaataatggagagagaaaaagaaag 5900970  T
Q  345 agagaagataataacatcatctgtgtacaaatatcatttctcaatt 390  Q
    ||||| ||||| |||||||  |||||||||||||||||||||||||    
T  5900969 agagatgataagaacatca--tgtgtacaaatatcatttctcaatt 5900926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 333
Target Start/End: Complemental strand, 17157316 - 17157228
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 333  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||||||    
T  17157316 gagcaatgatatttgtacatcaatttaatgacaactttggtgataactttgcttttctctcttttgattggtcaaaaacaatggagaga 17157228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 335
Target Start/End: Original strand, 29609764 - 29609856
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggt-aaaaaataatggagagaga 335  Q
    |||||||| ||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||||| || ||||||||||| |||||||    
T  29609764 agagcaatgatatttgtacatcaatttaatgacaactttggtgacaactttgttttcctctcttttgatttgtcaaaaaataatgaagagaga 29609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 26041493 - 26041374
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| |||||||||| |||| ||||     
T  26041493 gagcaatgatatttgtacatccattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagaaaaaaaggaag 26041394  T
Q  345 agagaagataataacatcat 364  Q
    |||||  |||| ||||||||    
T  26041393 agagagaataagaacatcat 26041374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 27164725 - 27164844
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| |||||| | |||||| ||||     
T  27164725 gagcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggaaaaagaaaaaggaag 27164824  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  27164825 agagaggataagaccatcat 27164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 30864305 - 30864424
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  30864305 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctcttttcttattggtcaaaaacaatggagagagaaaaaggaag 30864404  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  30864405 agagaggataagaccatcat 30864424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 10014851 - 10014936
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| || |||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  10014851 atatttgtacatccaattgatgacaactttggtgacaattttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 10014936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 25614717 - 25614802
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| | || |||||||||||||||| ||| ||||||| |||| || | |||||||||||| |||||||||||||||    
T  25614717 atatttgtacatctaattgatgacaattttggtgacaaccttgtttttctctcttcttattggtaaaaaacaatggagagagaaaa 25614802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 42060832 - 42060747
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| |||||||||||| |||||||| |||||||  || |||| ||||||||||| ||||| |||||||||| ||||    
T  42060832 atatttgtacatctatttaatgacaactttggtgacaactttgcctttctctcttttgattggtcaaaaacaatggagagaaaaaa 42060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 44511324 - 44511203
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||||||||| ||||||| ||| |||| || |||||||| |||| || | |||||| ||||| ||||| |||| |||| |||    
T  44511324 aagagcaatgatatttgtacatccattttatgacaactttagtgacaattttgtttttctcttttcttattggtcaaaaacaatggggagaaaaaaagga 44511225  T
Q  343 atagagaagataataacatcat 364  Q
    | |||||  |||| ||||||||    
T  44511224 agagagagaataagaacatcat 44511203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 39369485 - 39369381
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||  |||||||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  39369485 gagcaatgatattttgacatccatttaaggacaactttagtgacaactttgtttttctcttttcttattggttaaaaacaatggagagagaaaaaggaag 39369386  T
Q  345 agaga 349  Q
    |||||    
T  39369385 agaga 39369381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 33050366 - 33050247
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||| ||||||||||| ||||     
T  33050366 gagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatagagagagaaaaaggaag 33050267  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  33050266 agagaggataagaccatcat 33050247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 253 - 364
Target Start/End: Complemental strand, 42431898 - 42431787
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| ||||| ||    
T  42431898 atatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagagga 42431799  T
Q  353 taataacatcat 364  Q
    ||| | ||||||    
T  42431798 taagatcatcat 42431787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 355
Target Start/End: Complemental strand, 38978678 - 38978565
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| |||||||||||||| ||| ||||||| ||| |||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| |    
T  38978678 aaaagagcaatgatatttgtacatcc-tttcatgacaactttagtgacaaccttgtttttctctcttcttatttgtcaaaaacaatggagagagaaaaag 38978580  T
Q  341 gaatagagaagataa 355  Q
    ||| ||||| |||||    
T  38978579 gaagagagaggataa 38978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 116814 - 116695
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||  ||||||| || | |||| ||| || ||||| |||||||||||||||  |||     
T  116814 gagcaatgatatttgtacatccatttcatgacaactttagtgacaatcttgtttttctttctttttattcgtcaaaaacaatggagagagaaaaatgaag 116715  T
Q  345 agagaagataataacatcat 364  Q
    ||| ||||||| | ||||||    
T  116714 agaaaagataagaccatcat 116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 245 - 334
Target Start/End: Original strand, 30402081 - 30402168
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag 334  Q
    ||||||| ||||||||||||| |||| |||| ||||||||||| ||||||||||  || | |||| |||||||||||| |||| ||||||    
T  30402081 gagcaatgatatttgtacatctatttcatgataattttggtgacaactttgttt--ctttctttttattggtaaaaaacaatgaagagag 30402168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 346
Target Start/End: Original strand, 42476464 - 42476557
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatag 346  Q
    ||||||||||||||| || ||||||| ||||| || ||| |||||||  ||| |||| |||||| ||||| || |||||||||||| |||||||    
T  42476464 atatttgtacatccaattgatgacaactttggcgacaaccttgtttttttctctttttattggtcaaaaacaacggagagagaaaaaggaatag 42476557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 2469819 - 2469771
Alignment:
Q  301 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  2469819 ctctattttcattggtaaaaaataatggagagagaaaaaggaagagaga 2469771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 20406725 - 20406605
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||| ||||||||||||| |||| || || || |||||||||||  ||| |||| |||||| ||||||||  ||||||| |||   ||    
T  20406725 agagcaatgatatttggacatccatttaataacaacttcggcgacaactttgtttttttctctttttattggtcaaaaataacagagagaggaaaattaa 20406626  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| ||||||||    
T  20406625 gagagaggataaaaacatcat 20406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 29162166 - 29162286
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||| ||||  ||||||| ||| |||| ||  ||||||| |||| |||| |||| | ||||| ||||||||||||||| | ||    
T  29162166 agagcaatgatatttgtacattcattccatgacaactttagtgacaatcttgtttttctctctttttattgatcaaaaacaatggagagagaaaaagaaa 29162265  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  29162266 gagagaggataagatcatcat 29162286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 23330090 - 23330002
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    ||||||| ||||||||| || |||||| ||  ||||||||||| ||| ||||||  |||| |||| |||||||||||||||| ||||||||    
T  23330090 gagcaatgatatttgtatattcatttattggaaattttggtgacaaccttgttt--ctctctttttattggtaaaaaataatagagagaga 23330002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 3345044 - 3344955
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    |||||| |||||||||||| ||||||||||||||||||  || ||| |||||||  ||| |||| |   || ||||||||||||||||||    
T  3345044 agcaatgatatttgtacattcatttaatgacaattttgaagacaaccttgtttttatctcttttaacatgtcaaaaataatggagagaga 3344955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 8742558 - 8742473
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||||| |||| || | |||| | | ||| |||||||||||||||    
T  8742558 atatttgtacatccaattgatgacaactttggtgacaaccttgtttttctctcttcttattgatcataaacaatggagagagaaaa 8742473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 16645554 - 16645623
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattg 314  Q
    ||||||| |||||||| ||| |||||||||| || |||| ||| || ||||||||||||| |||||||||    
T  16645554 gagcaatgatatttgtccattcatttaatgataactttgttgacaattttgttttcctctcttttgattg 16645623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 17619915 - 17619984
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattg 314  Q
    ||||||| |||||||| ||| |||||||||| || |||| ||| || ||||||||||||| |||||||||    
T  17619915 gagcaatgatatttgtccattcatttaatgataactttgttgacaattttgttttcctctcttttgattg 17619984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 243 - 355
Target Start/End: Original strand, 19880117 - 19880229
Alignment:
Q  243 aagagcaataatatttgtacatccattt-aatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    ||||||||||||||||||||||||||||  ||||||| ||| |||| ||  || |||| |||| || | || |||  |||||||||||||||||||| ||    
T  19880117 aagagcaataatatttgtacatccatttgcatgacaactttagtgacaatcttatttttctctcttcttatgggt-caaaataatggagagagaaaaagg 19880215  T
Q  342 aatagagaagataa 355  Q
    || ||||| |||||    
T  19880216 aagagagaggataa 19880229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 37385129 - 37385214
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||||| | |||| || | |||||| ||||| ||| |||||||||||    
T  37385129 atatttgtacatccaattgatgacaactttggtgacaaccttgttcttctcttttcttattggtcaaaaacaattgagagagaaaa 37385214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 42640986 - 42640933
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  42640986 tgataactttgattttctcttttttgattggtcaaaaataatagagagagaaaa 42640933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 47530187 - 47530272
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||| || | || | |||||  ||||| |||||||||| ||||    
T  47530187 atatttgtacatctatttcatgacaactttggtgataaccttgtttttctttcttcttattggctaaaaacaatggagagaaaaaa 47530272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 338
Target Start/End: Original strand, 25332385 - 25332480
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||||||||||| ||| ||||||  | |||| |||  |||||||||  ||||||||  |||| |||||| ||||| |||||||||||||||    
T  25332385 aaagagcaataatatttgaacaaccatttgctaacaactttattgataacttctttttcctc-ctttttattggttaaaaacaatggagagagaaaa 25332480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 2346947 - 2347057
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||| ||||| ||||||| ||| |||| ||| || |||| || | || | |||||| ||||  |||||||||||||||  |||     
T  2346947 gagcaatgatatttgtacattcattttatgacaactttagtgacaaccttatttttctttcttgttattggtcaaaagcaatggagagagaaaaaagaag 2347046  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  2347047 agagaggataa 2347057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 19426728 - 19426659
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||||| ||||| ||| |||| |||||  ||||||||||||||||||||| |||| |||||    
T  19426728 ttttggtgacaacttttttttc-tctcttttcattggataaaaataatggagagagaaaaaggaagagaga 19426659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 22331129 - 22331203
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||| | || ||| ||||| | |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  22331129 acaatttttgggacaaccttgttatgctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 22331203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 43255451 - 43255565
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||| ||| ||||||||||||| | || |||| ||||||||||| ||  ||  ||| |||| || | ||| || |||||||||||||||| |||| |    
T  43255451 aaaagagtaatgatatttgtacatctaattgatgataattttggtgacaatcttacttttctctcttcttattagtcaaaaataatggagagaaaaaaag 43255550  T
Q  341 gaatagagaagataa 355  Q
    ||| ||||| |||||    
T  43255551 gaagagagatgataa 43255565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 47424908 - 47424977
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| || ||| ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  47424908 ttttggtgacaatttt-ttttcctctctttttattggttaaaaacaatggagagagaaaaaggaagagaga 47424977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 21037168 - 21037217
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| |||||||||||| ||| ||||  |||||||||||||||    
T  21037168 aactttgtttttctctattttgatcggtcaaaatcaatggagagagaaaa 21037217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Complemental strand, 21153191 - 21153142
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  21153191 aactttgattttctctcttttgattggtcaaaaataatagagagagaaaa 21153142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 30862768 - 30862715
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  30862768 tttttctctctttttattggtcaaaaataatggagagagaaaaaggaagagaga 30862715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 30982293 - 30982346
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||| |||||||||||||||| || |||||||| |||| |||||    
T  30982293 ttttcctctctttttattggtaaaaaataattgaaagagaaaaaggaagagaga 30982346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 36990173 - 36990120
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||| |||||| ||||||||||||||||||||| |||| |||||    
T  36990173 tttttctctttttttattggttaaaaataatggagagagaaaaaggaagagaga 36990120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 44894371 - 44894455
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| |||||||||| | || |||||| |||| |||||  |||  |||| |||| |||||||||||| |||||||||||||||    
T  44894371 atatttgaacatccatttga-gataatttttgtgacaacttcttttatctctcttttcattggtaaaaaacaatggagagagaaaa 44894455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 34348971 - 34349019
Alignment:
Q  301 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  34348971 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 34349019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 338
Target Start/End: Original strand, 37325728 - 37325800
Alignment:
Q  266 catttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||| |||| |||||| |||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  37325728 catttcatgaaaattttagtgacaatattgtttttctctctttttattggttaaaaacaatggagagagaaaa 37325800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 355
Target Start/End: Complemental strand, 37392228 - 37392116
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| ||||||| ||| ||||||  | |||| |||  ||| ||| |  |||| |||| |||| |||||| ||||| ||||||||||||||| |||    
T  37392228 aagagcaatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggttaaaaacaatggagagagaaaaagga 37392129  T
Q  343 atagagaagataa 355  Q
    | |||||| ||||    
T  37392128 agagagaaaataa 37392116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 35382 - 35500
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 345  Q
    |||||| ||||||||||||| |||||||||||||||||| || || ||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |    
T  35382 agcaatgatatttgtacatctatttaatgacaattttggagaaaattttgttttcctctcttttgattggtcaaaaataatggagagagaaaaaggaaga 35481  T
Q  346 gagaagataataacatcat 364  Q
    ||||  |||||||||||||    
T  35482 gagagaataataacatcat 35500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 30413620 - 30413736
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||| ||||| ||||||||||||||| ||||     
T  30413620 gagcaatgatatttgtacatccatttaatgacaattttggtgacaactttgcttttctctcttttgattggtcaaaaacaatggagagagaaaaaggaag 30413719  T
Q  345 agagaagataataacat 361  Q
    ||||| ||||| |||||    
T  30413720 agagaggataacaacat 30413736  T

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Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 43936345 - 43936466
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||| |||| |||| |||||| ||||| ||||||||||||||| |    
T  43936345 aaaagagcaatgatatttgtacatc-atttaatcacaattttggtgataattttgtttttctctttttttattggtcaaaaacaatggagagagaaaa-g 43936442  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||||||||||||||||||    
T  43936443 gaagagagaagataataacatcat 43936466  T

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Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 33004007 - 33003887
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||||| ||||||||||| |||||||||||| || ||||||||| |||| |||| ||||||| ||||||||||| ||| ||||    
T  33004007 agagcaatgatatttgtacatccttttaatgacaactttggtgataacctttttttcctctgtttttattgataaaaaacaatggagagaggaaaaggaa 33003908  T
Q  344 tagagaagataataacatcat 364  Q
     |||||  |||||||||||||    
T  33003907 aagagagaataataacatcat 33003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 12175217 - 12175335
Alignment:
Q  246 agcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaata 345  Q
    |||||| ||||||||||||  ||||||||| || |||||||| |||||||||||||||| ||||||||||| ||||| |||| ||||| |||| |||| |    
T  12175217 agcaatgatatttgtacatttatttaatgataactttggtgacaactttgttttcctctcttttgattggtcaaaaacaatgaagagaaaaaaaggaaga 12175316  T
Q  346 gagaagataataacatcat 364  Q
    |||| ||||||||||||||    
T  12175317 gagaggataataacatcat 12175335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 10550346 - 10550466
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||| ||| ||||||| |||||||||| ||||||| |||| ||| ||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||    
T  10550346 agagtaatgatatttggacatccatttgatgacaactttgttgacaactttgtttttctctatttttattggtcaaaaacaatggagagagaaaaaggaa 10550445  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  10550446 gagagaggataagagcatcat 10550466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 38021539 - 38021420
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| || |||||||  |||| ||||||||||| ||||| ||||||||||||||| ||||    
T  38021539 agagcaatgatatttgtacatc-atttaatgataactttggtgacaattttgtttctctctcttttgattggtcaaaaacaatggagagagaaaaaggaa 38021441  T
Q  344 tagagaagataataacatcat 364  Q
     |||||  |||||||||||||    
T  38021440 gagagagaataataacatcat 38021420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 44484544 - 44484663
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||| ||||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  44484544 gagcaatgatatttgtacatcaattttatgacaactttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaag 44484643  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| ||||||||    
T  44484644 agagatgataagaacatcat 44484663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 243 - 340
Target Start/End: Complemental strand, 36582441 - 36582344
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||| ||| ||||||| ||||||| | |||||| ||||| |||| ||||||||||||    
T  36582441 aagagcaatgatatttgtacatccatttgatgacaactttggtgacaaccttgtttttctctattctaattggtcaaaaacaatgaagagagaaaagg 36582344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 364
Target Start/End: Complemental strand, 37966536 - 37966420
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||||||| |||    
T  37966536 caatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaagggaagaga 37966437  T
Q  348 gaagataataacatcat 364  Q
    || ||||| | ||||||    
T  37966436 gaggataagaccatcat 37966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 27540158 - 27540079
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||||||||||||||||||| ||||||||||| ||||| | ||||||||||||| |||| ||||| ||||||||||||||    
T  27540158 tgataactttgttttcctcttttttgattggtcaaaaacattggagagagaaaaaggaagagagaggataataacatcat 27540079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 364
Target Start/End: Original strand, 3195973 - 3196094
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||||||||  ||||||| ||| || | ||| ||||||| |||| || | |||||| ||||||||||||||||||||| |||    
T  3195973 aagagcaatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaagga 3196072  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  3196073 agagagatgataagatcatcat 3196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 33029989 - 33030102
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||||||||| || ||||||||| |||| ||| ||| ||||||| ||||||||| ||||||  |||| ||||||||||||||| ||||    
T  33029989 agagcaatgatatttgtacatctatctaatgacaactttgatgacaaccttgtttttctctatttttattggttgaaaacaatggagagagaaaaaggaa 33030088  T
Q  344 tagagaagataata 357  Q
     ||| | |||||||    
T  33030089 gagaaaggataata 33030102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 5962813 - 5962728
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| | || |||| ||||||||||||||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  5962813 atatttgtacatctaattgatgataattttggtgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 5962728  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 248 - 361
Target Start/End: Original strand, 22353066 - 22353179
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||| || |||| || | ||||||  |||| |||| | |||||||| |||| |||    
T  22353066 caatgatatttgtacatccatttaatgataattttggtgataaccttgtatttctctcttcttattggtcgaaaacaatgaaaagagaaaaaggaagaga 22353165  T
Q  348 gaagataataacat 361  Q
    || ||||| |||||    
T  22353166 gaggataacaacat 22353179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 349
Target Start/End: Original strand, 30973895 - 30973983
Alignment:
Q  261 acatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||||| | |||||||||| ||||||||||||||| |||  |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  30973895 acatccatttgaagacaattttgatgataactttgtttttctcactttttattggtcaaaaacaatggagagagaaaaaggaagagaga 30973983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 23047971 - 23048069
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    ||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  23047971 gagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 23048069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 29871239 - 29871353
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    |||||||| || |||||||| |||| |||| ||||||| |||||||| ||||||||||  |||| || | |||||| ||||| |||||||||||||||      
T  29871239 aaaagagccatgatatttgtccatctatttcatgacaactttggtgacaactttgtttctctctcttcttattggttaaaaacaatggagagagaaaaaa 29871338  T
Q  341 gaatagagaagataa 355  Q
    ||| ||||| |||||    
T  29871339 gaagagagaggataa 29871353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 6885095 - 6884974
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||| ||||| ||||||| ||| |||| ||||||||||| |||| || | ||| || ||||| |||||||| ||||||  ||    
T  6885095 aagagcaatgatatttgtacattcatttcatgacaactttagtgacaactttgtttttctctcttcttattagtcaaaaacaatggagatagaaaaaaga 6884996  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  6884995 agagagaggataagaccatcat 6884974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 12192122 - 12192026
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||||||||| || || | || |||||||| ||| ||| ||| ||||||||| |||||| ||||| ||||||||||||||| |||| |||||    
T  12192122 atatttgtacatccaattgataataactttggtgacaaccttgcttttctctatttttattggtcaaaaacaatggagagagaaaaaggaagagaga 12192026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 338
Target Start/End: Original strand, 9694955 - 9695042
Alignment:
Q  251 taatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| ||||| || ||||||| |||||||| ||| ||| ||| ||||||||| || ||| |||||||||| ||||||||||    
T  9694955 taatatttgtaaatccaattgatgacaactttggtgacaaccttgcttttctctatttttatcggtcaaaaataatgaagagagaaaa 9695042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 364
Target Start/End: Complemental strand, 36383633 - 36383526
Alignment:
Q  257 ttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataat 356  Q
    ||||||||| |||| || |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||| ||||| |||||     
T  36383633 ttgtacatcaatttcataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagatgataag 36383534  T
Q  357 aacatcat 364  Q
    ||||||||    
T  36383533 aacatcat 36383526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 37480189 - 37480090
Alignment:
Q  51 aagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||| ||||||||| || || ||||||||  |||| || ||| |||||| |||||  ||| |||||||||| ||||||||||| ||||||||||||||||    
T  37480189 aagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggc 37480090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 30192236 - 30192358
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||| ||| ||||||||||||||| || |||| ||||| |  || ||| ||| ||| |||| |||| |||||||||||| |||||||| ||||||  |    
T  30192236 aaagagtaatgatatttgtacatccaattgatgataatttggacgaaaaccttgcttttctctttttttattggtaaaaaacaatggagaaagaaaaatg 30192335  T
Q  342 aatagagaagataataacatcat 364  Q
    |||||||| ||||| || |||||    
T  30192336 aatagagaggataaaaatatcat 30192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 36909740 - 36909824
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||||||||||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| |||||||||||||||    
T  36909740 atatttgtacatccatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 36909824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 4097128 - 4097068
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctct 304  Q
    |||||||| |||||||| |||||||||||| ||||||||||||| ||| ||||||| ||||    
T  4097128 agagcaatgatatttgtccatccatttaataacaattttggtgacaaccttgtttttctct 4097068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 38246638 - 38246758
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||||||||| |||  ||||||| ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||| ||||||| ||||    
T  38246638 agagcaatgatatttgtacatcaattccatgacaactttagtgacaaccttgtttctctctcttcttattggtcaaaaacaatggagggagaaaaaggaa 38246737  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  38246738 gagagaggataagaccatcat 38246758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 42327356 - 42327456
Alignment:
Q  50 taagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccagg 149  Q
    ||||||||||||||| || || ||||||||  ||| ||| ||| |||||| |||||  ||| |||||||||| | ||||||||| ||||||||||| |||    
T  42327356 taagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 42327455  T
Q  150 c 150  Q
    |    
T  42327456 c 42327456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 29893793 - 29893674
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||| |||||||  |||| || ||| |||| || |||||||| |||| || | |||| | ||||| ||||||||||||||| ||||     
T  29893793 gagcaatgatatttgtatatccattctatgataagtttagtgacaattttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaag 29893694  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  29893693 agagaggataagaccatcat 29893674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 34138959 - 34139030
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattgg-taaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||| || |||||| |||||||||||||| ||||| ||||||| ||||||||||||||| ||||| ||||    
T  34138959 ttttggcgacaacttttttttcctctattttcattggttaaaaaacaatggagagagaaaaaggaattgaga 34139030  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 42602668 - 42602569
Alignment:
Q  51 aagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||| ||||||||| || || ||||||||  ||||||| |||  ||||| |||||  |||||||||||||| | ||||||||| ||||||||||| ||||    
T  42602668 aagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggc 42602569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 349
Target Start/End: Complemental strand, 23391247 - 23391141
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||| ||| |||||||||||||||||  |||| || ||| | || ||||||||||| |||| || | |||| | |||||||||||||| |||||| |||    
T  23391247 aagaggaatgatatttgtacatccattccatgataactttagcgacaactttgtttttctctcttcttattgatcaaaaataatggagaaagaaaaagga 23391148  T
Q  343 atagaga 349  Q
    | |||||    
T  23391147 agagaga 23391141  T

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Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 26809665 - 26809579
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttg-ttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| || || |||||||||||||||||| |||| ||||| | | |||  |||||| ||||| |||||||||||||||    
T  26809665 atatttgtacatctatatagtgacaattttggtgataattttgattttcttatttttctattggttaaaaacaatggagagagaaaa 26809579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 12358488 - 12358403
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || ||||||| |||||||| ||| ||| ||| || | |||| |||||| ||||| |||| ||||||||||    
T  12358488 atatttgtacatccaattgatgacaactttggtgacaaccttgcttttctatctttttattggtcaaaaacaatgaagagagaaaa 12358403  T

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Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 13466007 - 13466056
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| |||||||||||||||| |||| |||| |||||||||||    
T  13466007 aactttgtttttctctattttgattggtcaaaattaatagagagagaaaa 13466056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 280 - 349
Target Start/End: Original strand, 14954522 - 14954591
Alignment:
Q  280 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| ||| ||| ||||||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  14954522 tttgatgacaaccttgtttttctcttttttaattggtaaaaaacaatggagagagaaaaaggaagagaga 14954591  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 245 - 338
Target Start/End: Complemental strand, 33857400 - 33857307
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||||||  ||||| |||||| ||||| |||||||| |||||| |||| || | || | |||||| ||||| |||||||||||||||    
T  33857400 gagcaatgatattttgacatctatttaaggacaactttggtgacaactttatttttctgtcttcttattggtcaaaaacaatggagagagaaaa 33857307  T

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Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 27307131 - 27307223
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    ||||||||| |||||| ||||||||||  ||||||| ||| |||| ||| || |||| |||| || | |||||| ||||| ||||||||||||    
T  27307131 aagagcaatgatatttatacatccattccatgacaactttagtgacaaccttatttttctctcttcttattggtcaaaaacaatggagagaga 27307223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 39133858 - 39133786
Alignment:
Q  292 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||||||| |||| |||| |||||| ||||||||||||||||||||| | || | |||| |||| ||||||||    
T  39133858 tttgtttttctctttttttattggttaaaaataatggagagagaaaaagtaagaaagaaaataacaacatcat 39133786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 1298333 - 1298258
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||||| ||||||||| ||||||||||| ||||| |||| ||| ||||||  ||| ||||  ||||||||||||||    
T  1298333 aactttattttcctctcttttgattggtcaaaaacaatgaagaaagaaaaaagaagagaggggataataacatcat 1298258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 3298993 - 3299112
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||| || |||||| ||||||||| ||||||||||| ||  || |||  |||| || | |||||| ||||| ||||||||||||||| | ||     
T  3298993 gagcaatgataattatacatctatttaatgataattttggtgacaatcttatttctctctcttcttattggttaaaaacaatggagagagaaaaagtaag 3299092  T
Q  345 agagaagataataacatcat 364  Q
    ||||| |||||  |||||||    
T  3299093 agagaggataacgacatcat 3299112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 364
Target Start/End: Original strand, 6851591 - 6851666
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    ||||||||||| |||| ||||||||||| ||||| ||| |||||||||||  ||| |||||  |||| ||||||||    
T  6851591 aactttgtttttctctcttttgattggtcaaaaacaattgagagagaaaaatgaagagagagaataacaacatcat 6851666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 349
Target Start/End: Complemental strand, 28165315 - 28165208
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||| ||||||||||| ||| ||||||  | |||| |||  ||| ||| || |||  |||| |||| |||||| ||||||||||||||||||||| ||    
T  28165315 aaagagaaataatatttgaacaaccatttgctaacaactttcatgacaaccttttttctctctctttttattggtcaaaaataatggagagagaaaaagg 28165216  T
Q  342 aatagaga 349  Q
    || |||||    
T  28165215 aagagaga 28165208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 355
Target Start/End: Original strand, 6639416 - 6639470
Alignment:
Q  301 ctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||| ||||    
T  6639416 ctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagagaaaataa 6639470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 6851559 - 6851597
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttg 283  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  6851559 gagcaatgatatttgtacatccatttaatgacaactttg 6851597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 19913929 - 19913863
Alignment:
Q  283 ggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||| |||||| |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  19913929 ggtgacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaagagaga 19913863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 26321620 - 26321689
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||||||||||| ||||| ||| |||| |||||| ||||| ||| ||||||||||| |||| |||||    
T  26321620 ttttggtgataacttttttttc-tctcttttcattggttaaaaacaattgagagagaaaaaggaagagaga 26321689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 34101131 - 34101073
Alignment:
Q  286 gataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    |||||||||  ||||||||||||| |||||| ||||||||| |||||| |||| |||||    
T  34101131 gataactttcatttcctctatttttattggtcaaaaataatagagagaaaaaaaggaat 34101073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 39744526 - 39744592
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    ||||||||||| |||||||||||||||| ||||  ||| ||||||||||| || | |||||| ||||    
T  39744526 aactttgtttttctctattttgattggtcaaaatcaatagagagagaaaaaggtagagagaaaataa 39744592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 4062032 - 4061983
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataact 292  Q
    ||||| ||| ||||||| |||||||||||||||||||||| |||| ||||    
T  4062032 aagagaaatgatatttgaacatccatttaatgacaatttttgtgacaact 4061983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 13104633 - 13104564
Alignment:
Q  274 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    ||||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  13104633 gacaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaa 13104564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 23880227 - 23880174
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  23880227 tttttctctcttttcattggtaaaaaaaaatggagagagaaaaaggaagagaga 23880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 343
Target Start/End: Complemental strand, 32750152 - 32750083
Alignment:
Q  274 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    ||||||||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| ||||    
T  32750152 gacaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaa 32750083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 41353417 - 41353478
Alignment:
Q  277 aattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||| |||| |||||  |||| |||| |||| |||||| |||||||||||||||||||||    
T  41353417 aatttttgtgacaacttcttttttctctttttttattggttaaaaataatggagagagaaaa 41353478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 16051332 - 16051380
Alignment:
Q  301 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  16051332 ctcttttttgattggtcaaaaataatagagagagaaaaaggaagagaga 16051380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 275
Target Start/End: Complemental strand, 27540188 - 27540156
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatga 275  Q
    ||||||||| |||||||||||||||||||||||    
T  27540188 aagagcaatgatatttgtacatccatttaatga 27540156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 31635742 - 31635802
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| ||| ||||  |||||||||| ||||||||| ||||||||||| |||| |||||    
T  31635742 aactttgattttctcttctttgattggtcaaaaataatagagagagaaaaaggaagagaga 31635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 38572114 - 38572018
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||||||| || || || |||| |||||||| ||| ||||||| |||| || | |||||| ||| | |||||||||||| ||  |||||||||    
T  38572114 atatttgtacattcaattgataacaactttggtgacaaccttgtttttctctcttcttattggtcaaagacaatggagagagagaaatgaatagaga 38572018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 2e-32; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 242 - 340
Target Start/End: Complemental strand, 11089763 - 11089664
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattgg-taaaaaataatggagagagaaaagg 340  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| ||||||||||| |||||||||||||    
T  11089763 aaagagcaatgatatttgtacatccatttaatgacaattttggtgacaactttgtttttctcttttttgattggttaaaaaataatagagagagaaaagg 11089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 43587828 - 43587705
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||  ||||||||||||||| |    
T  43587828 aaaagagcaatgatatttgtatatccatttaatgacaactttggtgacaactttgtttttctctcttttgattggtaaaaagcaatggagagagaaaaag 43587729  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| |||||  |||| ||||||||    
T  43587728 gaagagagagaataacaacatcat 43587705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 34972248 - 34972131
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||||||||||| |||||||| || |||||||| |||| ||||||||| | |||||||||||||||| ||||  |||     
T  34972248 gagcaatgatatttgtacatctatttaatgacaactttggtgacaattttgtttttctcttttttgattgatcaaaaataatggagagaaaaaa--gaag 34972151  T
Q  345 agagaagataataacatcat 364  Q
    ||||||||||||||||||||    
T  34972150 agagaagataataacatcat 34972131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 38504353 - 38504234
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| || |||||||| |||| ||||||||||| ||||| |||||||||||||||  |||     
T  38504353 gagcaatgatatttgtacatccatttaattacaattttggtgacaattttgtttttctctcttttgattggtcaaaaacaatggagagagaaaaatgaag 38504254  T
Q  345 agagaagataataacatcat 364  Q
    || || ||||| ||||||||    
T  38504253 agtgaggataacaacatcat 38504234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 43602311 - 43602430
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||| ||||||||||| ||||| |||  ||| |||||| ||||     
T  43602311 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttttgattggtcaaaaacaatatagaaagaaaaaggaaa 43602410  T
Q  345 agagaagataataacatcat 364  Q
    |||||  |||||| ||||||    
T  43602411 agagagaataataccatcat 43602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 360
Target Start/End: Complemental strand, 23952673 - 23952562
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||||||| || |||| ||||||| ||| ||||||| |||||||| |||| |||| |||||| ||||||||||||||||||||| | ||||||    
T  23952673 caatgatatttgtacgtctattttatgacaactttagtgataattttgtttttctctttttttattggtcaaaaataatggagagagaaaa-gaaataga 23952575  T
Q  348 gaagataataaca 360  Q
    |||||||| ||||    
T  23952574 gaagataagaaca 23952562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 1065604 - 1065481
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| |||||||||||||||||  ||||||| ||| |||||||| ||||||| || | || |  ||||| ||||| ||||||||||||||| |    
T  1065604 aaaagagcaatgatatttgtacatccattccatgacaactttagtgataaccttgtttttctatcttctttttggtcaaaaacaatggagagagaaaaag 1065505  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  1065504 gaagagagaggataagaccatcat 1065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 30927819 - 30927938
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| | ||     
T  30927819 gagcaatgatatttgtacatccatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 30927918  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| | ||||||    
T  30927919 agagaggataagaccatcat 30927938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 364
Target Start/End: Complemental strand, 41273702 - 41273579
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||||| |||||||||||||||||  ||||||| ||| || | ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |    
T  41273702 aaaagagcaatgatatttgtacatccattccatgacaactttagtaacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaag 41273603  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  41273602 gaagagagaggataagaccatcat 41273579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 6105323 - 6105416
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||| |||||||||||||||| ||||| ||| |||| |||||| ||||||||| ||||||||||| ||||| |||| ||||| ||||    
T  6105323 gagcaatgatacttgtacatccatttaaagacaactttagtgacaactttattttcctctcttttgattggtcaaaaacaatgtagagaaaaaa 6105416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 6825161 - 6825269
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    |||||| |||||||||||||||||| ||||| |||||| |||||||  ||| || |||| |||| || | |||||| ||||| ||||||||||||||| |    
T  6825161 aaaagaacaataatatttgtacatctatttattgacaactttggtgtcaaccttatttttctctcttcttattggttaaaaacaatggagagagaaaaag 6825260  T
Q  341 gaatagaga 349  Q
    ||| |||||    
T  6825261 gaacagaga 6825269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 364
Target Start/End: Original strand, 41293613 - 41293728
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||| |||||||||||||||||  ||||||| ||| |||| ||||| ||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||    
T  41293613 caatgatatttgtacatccattccatgacaactttagtgacaactt-gtttttctctcttcttattggtcaaaaacaatggagagagaaaatggaagaga 41293711  T
Q  348 gaagataataacatcat 364  Q
    |||||||| | ||||||    
T  41293712 gaagataagaccatcat 41293728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 39258943 - 39259053
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  |||||||||||  ||||||  ||||||| |||| || | ||| || ||||| ||||||||||||||| ||||     
T  39258943 gagcaatgatatttgtacatccattccatgacaattttaatgataatcttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaag 39259042  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  39259043 agagatgataa 39259053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 11139071 - 11138986
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| | || ||||||| |||||||| ||||||||||| || | |||| |||||| |||||||||| ||||||||||    
T  11139071 atatttgtacatcaaattgatgacaactttggtgacaactttgtttttctatctttttattggtcaaaaataatgaagagagaaaa 11138986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 19723093 - 19723213
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||||||||| || | ||||||| ||| |||| ||| ||||||| |||| || | ||| || ||||| ||||||||||||||| ||||    
T  19723093 agagcaatgatatttgtacatctatatcatgacaactttagtgacaaccttgtttttctctcttcttattagtcaaaaacaatggagagagaaaaaggaa 19723192  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  19723193 gagagaggataagaccatcat 19723213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 30129584 - 30129500
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 337  Q
    ||||||||||||||| || ||||||| |||||||| ||||||| ||| |||| || | |||||| |||||||||||||| |||||    
T  30129584 atatttgtacatccaattgatgacaactttggtgacaactttgcttttctctcttcttattggtcaaaaataatggagaaagaaa 30129500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 364
Target Start/End: Complemental strand, 29509405 - 29509330
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||||||||||||||| |||| |||||| ||||| |||| |||||||||| |||| ||||| |||||||| |||||    
T  29509405 aactttgttttcctctctttttattggtcaaaaacaatgaagagagaaaaaggaagagagaggataataatatcat 29509330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 2597056 - 2597146
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||||||| || || ||||||| |||||||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  2597056 atatttgtacattcaattgatgacaactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 2597146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 33817337 - 33817247
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||||||||||||| |||| || |||||||| |||| ||  ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  33817337 caatgatatttgtacatctatttcataacaattttagtgacaatcttgtttttctctctttttattggtcaaaaacaatggagagagaaaa 33817247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 968477 - 968360
Alignment:
Q  50 taagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccagg 149  Q
    ||||| ||||||||| || ||  |||||||   |||||| ||| |||||| ||||| |||| |||||||||| | ||||||||| |||||||||||||||    
T  968477 taagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagg 968378  T
Q  150 caaattgaagtggattca 167  Q
    | || | |||||| ||||    
T  968377 ccaactcaagtgggttca 968360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 5925230 - 5925145
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| || |||| ||||||| | |||||| |||||||||||||||||||||    
T  5925230 atatatgtacatccatttgatgacaacttttatgacaaccttatttttctctattcttattggtcaaaaataatggagagagaaaa 5925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 335
Target Start/End: Complemental strand, 14228879 - 14228786
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    |||||||||| |||| ||||||||||||| |||| |||||| |||| || ||| |||| |||| |||| |||||| ||||| |||| |||||||    
T  14228879 aaagagcaatgatatatgtacatccatttcatgataattttagtgacaattttatttttctctttttttattggtcaaaaacaatgaagagaga 14228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 366
Target Start/End: Complemental strand, 14531804 - 14531683
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||||||||||||||||| || | |||||||  ||  ||| ||| || |||| |||| || | |||| |  |||| |||||||||||||||  ||||    
T  14531804 gagcaataatatttgtacatctatctcatgacaacattaatgacaaccttatttttctctcttcttattgatctaaaacaatggagagagaaaaatgaat 14531705  T
Q  345 agagaagataataacatcatct 366  Q
    ||||||||||| ||||||||||    
T  14531704 agagaagataagaacatcatct 14531683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 37562037 - 37562133
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||||||||| || ||||||| |||| ||| ||| ||||||| |||| || | |||||| ||||| |||||||| |||||| |||| |||||    
T  37562037 atatttgtacatccaattgatgacaactttgatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagaaagaaaaaggaagagaga 37562133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 40211635 - 40211754
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||||||| ||| |||| || | ||   |||||||||| |||| || | |||||| ||||| ||||||||||||||| | ||     
T  40211635 gagcaatgatatttgtacatccattgaataacaacttagttgtatactttgtttttctctcttcttattggttaaaaacaatggagagagaaaaagtaag 40211734  T
Q  345 agagaagataataacatcat 364  Q
    |||||  |||| ||||||||    
T  40211735 agagataataacaacatcat 40211754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 6849408 - 6849466
Alignment:
Q  297 tttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    ||||||||||||  |||||||||||||||| ||||||||||| |||| |||||| ||||    
T  6849408 tttcctctatttctattggtaaaaaataatagagagagaaaaaggaagagagaaaataa 6849466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 11879412 - 11879482
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| | |||||  |||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||    
T  11879412 ttttggtaacaacttcctttttctctcttttgattggttaaaaataatggagagagaaaaaggaagagaga 11879482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 349
Target Start/End: Original strand, 11896828 - 11896898
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| | |||||  |||| |||| ||||||||||| ||||||||||||||||||||| |||| |||||    
T  11896828 ttttggtaacaacttcctttttctctcttttgattggttaaaaataatggagagagaaaaaggaagagaga 11896898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 355
Target Start/End: Complemental strand, 36064205 - 36064103
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||||||||| || |||| || |||||||| ||  ||| |||  ||| |||| |||||| |||||||||||||||| |||| |||| ||||| ||    
T  36064205 atatttgtacatccaattgatgataactttggtgacaaacttgcttttatctctttttattggtcaaaaataatggagagaaaaaaaggaagagagatga 36064106  T
Q  353 taa 355  Q
    |||    
T  36064105 taa 36064103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 355
Target Start/End: Complemental strand, 36497836 - 36497734
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||||||| | || ||||||| |||| | | ||| ||||||| |||| |||| |||||| ||||| ||| ||||||||||| | || ||||||||    
T  36497836 atatttgtacatctaattgatgacaactttgataacaaccttgtttttctctctttttattggttaaaaacaatagagagagaaaaagtaagagagaaga 36497737  T
Q  353 taa 355  Q
    |||    
T  36497736 taa 36497734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 43186469 - 43186386
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||||||| ||||  || |||||||| |||| || |||||||  ||||||||| |||||| ||||| |||||||||||||||    
T  43186469 atatttgtacattcattccataacaattttagtgacaattttgttt--ctctatttttattggtcaaaaacaatggagagagaaaa 43186386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 5924985 - 5924900
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| || |||| |||| || | |||||| |||||||||||||||||||||    
T  5924985 atatatgtacatccatttgatgacaactttcatgacaaccttatttttctctcttcttattggtcaaaaataatggagagagaaaa 5924900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 12783762 - 12783815
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataacttt 294  Q
    ||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||    
T  12783762 aaaagagaaatgatatttgaacatccatttaatgacaatttttgtgacaacttt 12783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 34765746 - 34765831
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| | || ||||||||||| |||| ||| ||  ||| |||| |||| |||||| ||||| |||||||||||||||    
T  34765746 atatttgtacatctaattgatgacaattttagtgacaaccttacttttctctttttttattggtcaaaaacaatggagagagaaaa 34765831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 36593673 - 36593778
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | ||| |  ||||| ||||||||||||| | ||||    
T  36593673 agagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattagccaaaaacaatggagagagaagaaggaa 36593772  T
Q  344 tagaga 349  Q
     |||||    
T  36593773 gagaga 36593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 37033029 - 37033093
Alignment:
Q  284 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||||| ||||||||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  37033029 gtgataacttttttttcctct-ttttcattggtcaaaaacaatggagagagaaaaaggaaaagaga 37033093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 338
Target Start/End: Original strand, 39153612 - 39153665
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| ||| |||| ||||||||||| ||||||||| |||||||||||    
T  39153612 tgataactttgattttctctcttttgattggtcaaaaataatagagagagaaaa 39153665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 364
Target Start/End: Complemental strand, 13884472 - 13884380
Alignment:
Q  272 atgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    ||||||| ||| |||| || |||||||| |||| || | |||| | ||||| ||||||||||||||| |||| ||||| ||||| ||||||||    
T  13884472 atgacaactttagtgacaattttgtttttctctcttcttattgatcaaaaacaatggagagagaaaaaggaagagagatgataagaacatcat 13884380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 30925577 - 30925652
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    ||||||||| |||||| ||||| ||| |||| |||||| ||||| ||||||||||||||| |||| |||||| ||||    
T  30925577 ttttggtgacaacttttttttc-tctcttttcattggttaaaaacaatggagagagaaaaaggaagagagaaaataa 30925652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 40719576 - 40719636
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| ||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||||    
T  40719576 aactttggttttctctcttttgattggtcaaaaataatagagagagaaaaaggaagagaga 40719636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 6745926 - 6746041
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataa-ctttgttttcctctattttgattggtaaaaaataatggagagagaaaag 339  Q
    |||||||||||  ||||||||||||||||  ||||||||||| |||| || ||| ||||| |||| || | |||| | ||||| ||||| | |||||||     
T  6745926 aaaagagcaatggtatttgtacatccattccatgacaattttagtgacaaccttagtttttctctcttcttattgattaaaaacaatggggggagaaaaa 6746025  T
Q  340 ggaatagagaagataa 355  Q
    |||| ||||| |||||    
T  6746026 ggaagagagaggataa 6746041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 41520010 - 41519951
Alignment:
Q  277 aattttggtgataactttgtttt-cctctattttgattggtaaaaaataatggagagaga 335  Q
    ||||||||||||||| ||||||| ||||| |||| |||||| ||||| ||||||||||||    
T  41520010 aattttggtgataaccttgtttttcctctctttttattggtcaaaaacaatggagagaga 41519951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 348
Target Start/End: Original strand, 44086440 - 44086503
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagag 348  Q
    |||||||||  ||||||||| |||  |||||| |||||||||||| ||||||||||||| ||||    
T  44086440 tgataacttccttttcctctctttctattggtcaaaaataatggaaagagaaaagggaagagag 44086503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 2203601 - 2203507
Alignment:
Q  56 gctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    ||||||||| || || ||||||||  |||| || |||||| ||| |||||  ||| |||||||||| | ||||||||| ||||||||||| ||||    
T  2203601 gctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggc 2203507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 6536634 - 6536540
Alignment:
Q  51 aagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccac 145  Q
    |||| |||||||||||| ||  |||||||  || |||| |||||||||| |||||  ||| |||||||||| |  |||||||| |||||||||||    
T  6536634 aagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 6536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 6656227 - 6656337
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    |||||||  ||||||||||||||||  |||| |||||| |||| ||| ||||||| |||| || | |||| | ||||| |||||| ||||||||  |||     
T  6656227 gagcaatggtatttgtacatccattccatgataattttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaag 6656326  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  6656327 agagaggataa 6656337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 6736629 - 6736739
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    |||||||  ||||||||||||||||  |||| |||||| |||| ||| ||||||| |||| || | |||| | ||||| |||||| ||||||||  |||     
T  6736629 gagcaatggtatttgtacatccattccatgataattttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggaaagagaaaaatgaag 6736728  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  6736729 agagaggataa 6736739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 7129707 - 7129618
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||||||| ||||| || |||| |||| ||| ||||||||||| |||| || | |||||| ||||| || |||||||||||| ||||    
T  7129707 atatttgtacattcatttcat-acaactttgatgacaactttgtttttctctcttcttattggtcaaaaacaacggagagagaaaaaggaa 7129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 354
Target Start/End: Complemental strand, 8888428 - 8888326
Alignment:
Q  253 atatttgtacatccatt-taatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaag 351  Q
    ||||||||| ||||||| || |||||| |||||||| ||| ||| ||| |||  || | |||||| ||||| ||||||||||||||| |||| ||||| |    
T  8888428 atatttgtatatccattatagtgacaactttggtgacaaccttgattttctcatttcttattggttaaaaacaatggagagagaaaaaggaagagagagg 8888329  T
Q  352 ata 354  Q
    |||    
T  8888328 ata 8888326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 20288716 - 20288606
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  || || | ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||||||||||| | ||     
T  20288716 gagcaatgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 20288617  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  20288616 agagaggataa 20288606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 21075345 - 21075235
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  || || | ||| |||| ||| ||||||  |||| || | |||||| ||||| ||||||||||||||| | ||     
T  21075345 gagcaatgatatttgtacatccattccattacgactttagtgacaacgttgtttctctctcttcttattggtcaaaaacaatggagagagaaaaagaaag 21075246  T
Q  345 agagaagataa 355  Q
    ||||| |||||    
T  21075245 agagaggataa 21075235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 22836057 - 22836131
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||| | |||||| ||||| | |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  22836057 acaatttttgggataaccttgttgtgctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 22836131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 349
Target Start/End: Complemental strand, 34474137 - 34474028
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaa-ttttggtgataactttgttttc-ctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||| ||| ||||||| ||| |||||| || |||| ||||||||| |||||  ||||| |||| |||| |||||| ||||| |||||||||||||||    
T  34474137 aaaagagtaatgatatttgaacaaccatttcat-acaacttttggtgacaacttctttttctctcttttttcattggttaaaaacaatggagagagaaaa 34474039  T
Q  339 gggaatagaga 349  Q
     |||| |||||    
T  34474038 aggaagagaga 34474028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 35595390 - 35595300
Alignment:
Q  248 caataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| |||||||||||||  | |||||| || |||||||| ||| ||| ||| |||| || | |||||||||||| |||||||| ||||||    
T  35595390 caatgatatttgtacatctgtctaatgataagtttggtgacaaccttgcttttctctcttcttattggtaaaaaacaatggagaaagaaaa 35595300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 9208065 - 9208114
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactt 293  Q
    |||| ||| ||||||| |||||||||||||||||||||| |||| |||||    
T  9208065 agagaaatgatatttgaacatccatttaatgacaatttttgtgacaactt 9208114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 13565402 - 13565483
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaa 322  Q
    ||||||||||| ||||||||||||| ||||||| |||| |||  ||| ||| ||| ||| || |||| | ||||||||||||    
T  13565402 aaaagagcaatgatatttgtacatcaatttaatcacaactttaatgacaaccttgcttttctttattcttattggtaaaaaa 13565483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 27630893 - 27630934
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaatttt 282  Q
    ||||||| ||| |||||||||||||||||| |||||||||||    
T  27630893 aaaagagaaatgatatttgtacatccattttatgacaatttt 27630934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 28473484 - 28473537
Alignment:
Q  296 ttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  28473484 tttttctctcttttcattggtaaaaaacaatggagagagaaaaaggaagagaga 28473537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 30608642 - 30608691
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| || | ||||||||||||||||||||  |||||||||||    
T  30608642 aactttgtttttctatcttttgattggtaaaaaataacagagagagaaaa 30608691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 34970389 - 34970300
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagaga 333  Q
    |||||||| ||||||  |||| ||||||| ||||| ||| || | ||||||||||| |||| || | |||||| ||||| ||||||||||    
T  34970389 agagcaatgatattttgacattcatttaaggacaactttagtaacaactttgtttttctctcttcttattggttaaaaacaatggagaga 34970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 39027606 - 39027557
Alignment:
Q  306 ttttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    |||| |||||||||||||||||||||||||||| | || |||||| ||||    
T  39027606 tttttattggtaaaaaataatggagagagaaaaagaaagagagaaaataa 39027557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 361
Target Start/End: Original strand, 11114613 - 11114673
Alignment:
Q  301 ctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 361  Q
    ||||||||  |||||| ||||||||| ||||||||||| |||| |||||| |||| |||||    
T  11114613 ctctatttctattggtcaaaaataatagagagagaaaaaggaagagagaaaataaaaacat 11114673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 16852411 - 16852355
Alignment:
Q  94 gaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||||| ||||| |||| |||||||||| | ||||||||| ||||||||||| ||||    
T  16852411 gaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggc 16852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 19703492 - 19703548
Alignment:
Q  94 gaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||||| |||||  ||| |||||||||| ||||||||||| ||||||||||| ||||    
T  19703492 gaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggc 19703548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 22767284 - 22767208
Alignment:
Q  274 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaa 350  Q
    ||||| ||| |||| |||||  |||| |||| |||| |||||| ||||| ||||||||||||||| |||| ||||||    
T  22767284 gacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagagaa 22767208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 29858054 - 29858110
Alignment:
Q  94 gaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||||| ||||| |||| |||||||||| | | ||||||| ||||||||||||||||    
T  29858054 gaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggc 29858110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 37568498 - 37568590
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagaga 335  Q
    ||||||||| |||||||||||||||||| || | || ||| |||| ||| ||||||| || | || | |||||| ||||| ||| ||||||||    
T  37568498 aagagcaatgatatttgtacatccatttcattataactttagtgacaacattgtttttcttttttcttattggtcaaaaacaatagagagaga 37568590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 40102150 - 40102102
Alignment:
Q  301 ctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||| |||| |||||||||||| ||||||||||||||| |||| |||||    
T  40102150 ctctcttttcattggtaaaaaaaaatggagagagaaaaaggaagagaga 40102102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 3e-31; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 10385599 - 10385478
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| ||||||||||||||||||||||| || |||||||| || |||| ||| |||| ||||||||||| ||||| ||||||||||||||| |||    
T  10385599 aagagcaatgatatttgtacatccatttaatgataactttggtgacaattttgcttttctcttttttgattggtcaaaaacaatggagagagaaaaagga 10385500  T
Q  343 atagagaagataataacatcat 364  Q
    ||||||| ||||| ||||||||    
T  10385499 atagagaggataacaacatcat 10385478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 43195977 - 43196096
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||| | | |||| ||||||||||| ||||| ||||||||||||||| ||||     
T  43195977 gagcaataatatttgtacatctatttaatgacaactttggtgataactttgatgttctctcttttgattggtcaaaaacaatggagagagaaaaaggaag 43196076  T
Q  345 agagaagataataacatcat 364  Q
    |||||  |||| ||||||||    
T  43196077 agagagaataacaacatcat 43196096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 242 - 357
Target Start/End: Original strand, 49189096 - 49189211
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    ||||| |||| |||||||||||||||||||||||||| |||||||| || ||||||||||||| ||||||||||| ||||| ||||||||||||||| |     
T  49189096 aaagaacaatgatatttgtacatccatttaatgacaactttggtgacaattttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaga 49189195  T
Q  342 aatagagaagataata 357  Q
    || ||||| |||||||    
T  49189196 aagagagaggataata 49189211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 5383943 - 5383823
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| ||||||||||||||||||||| |||| |||||||| ||||||||||| |||| ||||||||||  ||||| |||| ||||| |||| ||||    
T  5383943 agagcaatgatatttgtacatccatttaattacaactttggtgacaactttgtttttctctcttttgattggctaaaaacaatgaagagaaaaaaaggaa 5383844  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| ||||||||    
T  5383843 gagagaggataacaacatcat 5383823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 37669582 - 37669462
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||| |||||||||| ||||| ||||| ||||||||| |||||| ||||||||||| ||||| ||| |||||  |||| ||||    
T  37669582 agagcaatgatatttgtacattcatttaatgataatttcggtgacaactttgttctcctcttttttgattggtcaaaaacaatagagagtcaaaaaggaa 37669483  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||||||||||||    
T  37669482 gagagaggataataacatcat 37669462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 364
Target Start/End: Original strand, 2257617 - 2257701
Alignment:
Q  280 tttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||| ||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||| || |||||||||||||||||    
T  2257617 tttgatgacaactttgttttcctctcttttgattggtcaaaaacaatggagagagaaaaaggaaaagtgaagataataacatcat 2257701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 6829670 - 6829792
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||||  ||||||| ||| |||| ||  ||||||| |||| || | |||||| ||||||||| ||||||||||| ||    
T  6829670 aaagagcaatgatatttgtacatccattccatgacaactttagtgacaatcttgtttttctctcttcttattggtcaaaaataatagagagagaaaaagg 6829769  T
Q  342 aatagagaagataataacatcat 364  Q
    || ||||| ||||| | ||||||    
T  6829770 aagagagatgataagaccatcat 6829792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 36669267 - 36669377
Alignment:
Q  254 tatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagat 353  Q
    |||||||| |||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||||||||||||||||||| |||| ||||| |||    
T  36669267 tatttgtaaatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaataatggagagagaaaaaggaagagagaggat 36669366  T
Q  354 aataacatcat 364  Q
    || ||||||||    
T  36669367 aaaaacatcat 36669377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 13813743 - 13813622
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||||| |||||||||||||||||  || |||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| |||    
T  13813743 aagagcaatgatatttgtacatccattccataacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagga 13813644  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  13813643 agagagaggataagaccatcat 13813622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 19920949 - 19920852
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| ||||||  |||||||||||| ||||| |||||||| ||||||||||| |||| || | |||||| ||||| |||| ||||||||||    
T  19920949 aaaagagcaatgatattttgacatccatttaaggacaactttggtgacaactttgtttttctctcttcttattggtcaaaaacaatgaagagagaaaa 19920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 27578366 - 27578246
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||| ||||  ||||||||||| || | ||| ||||||| ||||||| | |||||| ||||| ||||||||||||||| | ||    
T  27578366 agagcaatgatatttgtacattcattccatgacaattttagtaacaaccttgtttttctctattcttattggtcaaaaacaatggagagagaaaaagaaa 27578267  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  27578266 gagagaggataagaccatcat 27578246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 26501478 - 26501359
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||  ||||||| |||  ||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||  ||||    
T  26501478 gagcaatgatatttgtacatctattacatgacaactttaatgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaatgaat 26501379  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| ||||||||    
T  26501378 agagaggataagaacatcat 26501359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 39669964 - 39669873
Alignment:
Q  270 taatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 361  Q
    ||||||||| |||| ||| |||||| |||| ||||||||| ||||||  |||| ||||||||||||||| | |||||||| |||||||||||    
T  39669964 taatgacaactttgatgacaactttatttttctctatttttattggttgaaaacaatggagagagaaaaagaaatagagatgataataacat 39669873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 50035426 - 50035545
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||| ||||||| ||| |||| |||||| |||| |||| || | |||||| ||||| ||| ||||||||||| ||||     
T  50035426 gagcaatgatatttgtacatctatttcatgacaactttagtgacaactttatttttctcttttgttattggtcaaaaagaatagagagagaaaaaggaag 50035525  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| || |||||    
T  50035526 agagatgataaaaatatcat 50035545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 242 - 364
Target Start/End: Original strand, 3291310 - 3291432
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||| ||| |||||||||||||||||  |||||||||||  ||||||| ||||||  |||| || |  ||||| |||||||||||| |||||||| ||    
T  3291310 aaagagtaatgatatttgtacatccattccatgacaattttaatgataaccttgtttctctctcttctttttggtcaaaaataatggaaagagaaaaagg 3291409  T
Q  342 aatagagaagataataacatcat 364  Q
    || ||||| ||||| | ||||||    
T  3291410 aagagagatgataagaccatcat 3291432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 42843240 - 42843325
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || |||| ||||||||||| ||| ||||||| |||| || | |||||| ||||| |||||||||||||||    
T  42843240 atatttgtacatccaattgatgataattttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaa 42843325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 7371835 - 7371955
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    ||||| || |||| ||||||||||||  ||||||| |||  ||||||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||     
T  7371835 agagcgatgatatatgtacatccattccatgacaactttactgataactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggag 7371934  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  7371935 gagagaggataagaccatcat 7371955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 50777319 - 50777415
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||||||||| || |||||||||||||||| ||| ||||||| |||| || | |||||| ||||| ||| |||||| |||| |||| |||||    
T  50777319 atatttgtacatccaattgatgacaattttggtgacaaccttgtttttctctcttcttattggttaaaaacaatagagagataaaaaggaagagaga 50777415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 364
Target Start/End: Complemental strand, 9011820 - 9011709
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    |||||||||||||||||| |||||||| || |||| ||  ||||||| |||| || | |||||| ||||| ||||||||||||||| | || ||||| ||    
T  9011820 atatttgtacatccatttcatgacaatgttagtgacaatcttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaagaaagagagagga 9011721  T
Q  353 taataacatcat 364  Q
    ||| | ||||||    
T  9011720 taagaccatcat 9011709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 253 - 355
Target Start/End: Complemental strand, 50797955 - 50797853
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||||||| | || |||| || |||||||| ||  |||||||  ||| |||| |||||| ||||||||||||||||||||| |||| ||||| ||    
T  50797955 atatttgtacatctaattgatgataactttggtgacaaacttgtttttatctctttttattggtcaaaaataatggagagagaaaaaggaagagagatga 50797856  T
Q  353 taa 355  Q
    |||    
T  50797855 taa 50797853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 338
Target Start/End: Original strand, 10302271 - 10302324
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||| ||| |||| ||||||||||||||||||||| |||||||||||    
T  10302271 tgataactttgattttctctcttttgattggtaaaaaataatagagagagaaaa 10302324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 25130888 - 25130767
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggga 342  Q
    ||||||| | ||||||||||||| |||| ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| |||| |||| ||||| |||    
T  25130888 aagagcagtgatatttgtacatctatttcatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatgaagagggaaaaagga 25130789  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  25130788 agagagaggataagatcatcat 25130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 364
Target Start/End: Complemental strand, 25995647 - 25995524
Alignment:
Q  243 aagagcaataatatttgtacatccat--ttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||| ||||||||||||| ||  || ||||||| |||  ||| ||| || |||| |||| |||| |||||| ||||| ||||||||||||||| |    
T  25995647 aagagcaatgatatttgtacatctatatttcatgacaactttaatgacaaccttatttttctctctttttattggtcaaaaacaatggagagagaaaaag 25995548  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  25995547 gaagagagaggataagaccatcat 25995524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 349
Target Start/End: Original strand, 27895649 - 27895752
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||  |||| ||||||| ||||| ||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||     
T  27895649 gagcaatgatattttgacattcatttaaggacaactttagtgacaactttgtttttctctcttcttattggttaaaaa-aatggagagagaaaaaggaag 27895747  T
Q  345 agaga 349  Q
    |||||    
T  27895748 agaga 27895752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 241 - 364
Target Start/End: Original strand, 29489243 - 29489366
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||||| | ||||||||||||  |||| ||||||| ||| |||| ||| ||||||| || | || | |||||| ||||| |||||||||||||||      
T  29489243 aaaagagcagtgatatttgtacatatatttcatgacaactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaatggagagagaaaaaa 29489342  T
Q  341 gaatagagaagataataacatcat 364  Q
    ||| ||||| ||||| | ||||||    
T  29489343 gaagagagaggataagaccatcat 29489366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 29362624 - 29362690
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    ||||||||||| |||| || | |||||| ||||| ||||||||||||||| |||| |||||||||||    
T  29362624 aactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaagagagaagataa 29362690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 8670215 - 8670162
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||||| || | ||||||||||| ||||||||| |||||||||||    
T  8670215 tgataactttgtttttctatcttttgattggtcaaaaataatagagagagaaaa 8670162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 51193029 - 51193114
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||| ||||||||||||| ||||||| |||  ||| ||| ||||||| |||| || | |||||  |||||||||||||||||||||    
T  51193029 atatatgtacatccatttgatgacaactttcatgacaacattgtttttctctcttcttattggccaaaaataatggagagagaaaa 51193114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 284
Target Start/End: Original strand, 24749629 - 24749669
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttgg 284  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  24749629 agagcaatgatatttgtacatccatttaataacaattttgg 24749669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 27563657 - 27563617
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttg 283  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  27563657 aagaacaatgatatttgtacatccatttaatgacaattttg 27563617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 42615996 - 42615936
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||||| || | ||||||||||| ||||||||| ||||||||||| | ||||||||    
T  42615996 aactttgtttttctattttttgattggtcaaaaataatagagagagaaaaagaaatagaga 42615936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 361
Target Start/End: Original strand, 43457716 - 43457823
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    |||| ||||||||||||| | ||||| |||| ||| ||| ||||||| || | |||| |||| | ||||| ||||||||||||||| |||| ||||| ||    
T  43457716 atatatgtacatccatttgaagacaaatttgatgacaaccttgtttttctgtttttt-attgatcaaaaagaatggagagagaaaaaggaagagagagga 43457814  T
Q  353 taataacat 361  Q
     ||||||||    
T  43457815 aaataacat 43457823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 352
Target Start/End: Original strand, 7078396 - 7078495
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    |||| ||||||||||||| | ||||| |||| ||| ||| ||||||  |||| || | |||||| ||||| ||||||||||| ||| |||| ||||||||    
T  7078396 atatatgtacatccatttgaagacaactttgatgacaaccttgtttctctcttttctaattggtcaaaaacaatggagagaggaaaaggaagagagaaga 7078495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 150
Target Start/End: Original strand, 17745219 - 17745317
Alignment:
Q  51 aagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||| ||||||||||||| || ||||||   || |||| ||| |||| | ||||| |||| |||||||||| ||||||||||| ||||||||||| ||||    
T  17745219 aagaagctaaattaaccacct-aaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggc 17745317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 349
Target Start/End: Complemental strand, 15061994 - 15061924
Alignment:
Q  279 ttttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||||| |||||| |||| |||| |||| |||||  ||||| ||||||||||||||| |||| |||||    
T  15061994 ttttggtgacaactttttttttctctctttttattggataaaaacaatggagagagaaaaaggaagagaga 15061924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 26585122 - 26585180
Alignment:
Q  306 ttttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||| |||||| ||||||||||||||||||||| |||| ||||| ||||| | ||||||    
T  26585122 tttttattggtcaaaaataatggagagagaaaaaggaagagagaggataagaccatcat 26585180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 46902778 - 46902708
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataac-tttgttttcctctattttgattggtaaaaaa 322  Q
    ||||||||||||||| || ||||||||||| |||| ||| ||| ||||||||| || | ||||||||||||    
T  46902778 atatttgtacatccaattgatgacaattttagtgacaactttttttttcctctcttcttattggtaaaaaa 46902708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 366801 - 366748
Alignment:
Q  284 gtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaa 337  Q
    |||| |||||| ||||||||| |||| |||||| ||||| ||||||||||||||    
T  366801 gtgacaacttttttttcctctcttttcattggtcaaaaacaatggagagagaaa 366748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 4618786 - 4618725
Alignment:
Q  286 gataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaataga 347  Q
    |||||| ||||| | |||| |||| |||||| |||||||||||||||| |||| ||||||||    
T  4618786 gataaccttgttgttctcttttttcattggtcaaaaataatggagagaaaaaaaggaataga 4618725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 9165163 - 9165256
Alignment:
Q  57 ctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    ||||| |||||  ||||||||||  || |||| |||||||||| ||||   ||| |||||||||| | ||||||||| ||||||||||| ||||    
T  9165163 ctaaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggc 9165256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 349
Target Start/End: Original strand, 22389411 - 22389517
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagg 340  Q
    ||||||| ||| ||||||| ||| |||||| ||  ||| ||| |||| |||||  |||| |||| |||| |||||| |||||||||||||| |||||| |    
T  22389411 aaaagagtaatgatatttgaacaaccatttgat--caacttttgtgacaacttcttttttctctcttttcattggtcaaaaataatggagaaagaaaaag 22389508  T
Q  341 gaatagaga 349  Q
    ||| |||||    
T  22389509 gaagagaga 22389517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 27563620 - 27563551
Alignment:
Q  292 tttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 361  Q
    |||||||| |||| ||||||||||| | ||| ||||||||||||||| |||| | | ||||||| |||||    
T  27563620 tttgtttttctctcttttgattggtcataaacaatggagagagaaaaaggaagataaaagataacaacat 27563551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 51704683 - 51704720
Alignment:
Q  241 aaaagagcaataatatttgtacatccatttaatgacaa 278  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  51704683 aaaagagcaatgatatttgtatatccatttaatgacaa 51704720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 51704737 - 51704794
Alignment:
Q  307 tttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacatcat 364  Q
    |||||||||| ||||||||||||||||||| |  ||||| |||| | |||||||||||    
T  51704737 tttgattggtcaaaaataatggagagagaagaaagaataaagaaaacaataacatcat 51704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 3606024 - 3606060
Alignment:
Q  285 tgataactttgttttcctctattttgattggtaaaaa 321  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  3606024 tgataactttgtttttctctattttgattggtcaaaa 3606060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 8905869 - 8905801
Alignment:
Q  287 ataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataa 355  Q
    ||||||||||||| ||||  | |||||||| ||||||||| |||| |||||| |||| |||||| ||||    
T  8905869 ataactttgtttttctcttctatgattggtcaaaaataatagagaaagaaaaaggaagagagaaaataa 8905801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 350
Target Start/End: Original strand, 25302562 - 25302638
Alignment:
Q  274 gacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaa 350  Q
    ||||||||  |||| |||||| |||| |||| |||| |||||| ||||| ||| ||||||||||| |||| ||||||    
T  25302562 gacaatttatgtgacaactttttttttctctcttttcattggttaaaaacaatagagagagaaaaaggaagagagaa 25302638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 31383803 - 31383855
Alignment:
Q  94 gaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccacc 146  Q
    |||||| ||||||| || |||||||||| | ||||||||| ||||||||||||    
T  31383803 gaacctgagaccccaaggaggagcacactcccaggtcccaagccaataccacc 31383855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 245 - 349
Target Start/End: Original strand, 35043608 - 35043712
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||| ||| ||||||  | ||||||||  ||| ||| |  |||| |||| |||| |||||| |||||||||||||||| |||| ||||     
T  35043608 gagcaatgatatttgaacaaccatttgctaacaattttcatgacaacctcatttttctctctttttattggttaaaaataatggagagataaaaaggaag 35043707  T
Q  345 agaga 349  Q
    |||||    
T  35043708 agaga 35043712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 36371585 - 36371485
Alignment:
Q  50 taagatgctaaattaaccaactcaaattggttccggagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccagg 149  Q
    ||||| |||||| |||||  ||||||||||   | |||| ||| ||||||||||||  ||| |||||||||| | ||||| ||| ||||||||||| |||    
T  36371585 taagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactagg 36371486  T
Q  150 c 150  Q
    |    
T  36371485 c 36371485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 40257474 - 40257414
Alignment:
Q  90 aattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||||||| | ||||| |||| |||||||||| | |||||| || ||||||||||||||||    
T  40257474 aattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggc 40257414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 349
Target Start/End: Complemental strand, 40610403 - 40610308
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    ||||||| |||||||||| | ||||| ||| |||| |||||  |||  |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  40610403 atatttgaacatccatttga-gacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaacaatggagagagaaaaaggaagagaga 40610308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 245 - 364
Target Start/End: Complemental strand, 17158 - 17039
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||  |||| || |||||||| ||||| |||||||||||||||  |||     
T  17158 gagcaatgatatttgtacatccatttaatgacaactttggtgacaactttgtttctctctcttctgattggtcaaaaacaatggagagagaaaaaagaag 17059  T
Q  345 agagaagataataacatcat 364  Q
    |||||  |||||||||||||    
T  17058 agagagaataataacatcat 17039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 244 - 349
Target Start/End: Original strand, 1383 - 1488
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||||||||  ||||||||||| |||| ||||||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  1383 agagcaatgatatttgtacatccattccatgacaattttagtgacaactttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 1482  T
Q  344 tagaga 349  Q
     |||||    
T  1483 gagaga 1488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 31188 - 31307
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||| |||  |||| |||||| |||| ||||||||||| |||| || | |||||| |||||||||||||||| |||| ||||     
T  31188 gagcaatgatatttgtacatctattacatgataattttagtgacaactttgtttttctctgttcttattggtcaaaaataatggagagataaaaaggaag 31287  T
Q  345 agagaagataataacatcat 364  Q
    ||||| ||||| ||||||||    
T  31288 agagaggataagaacatcat 31307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 147143 - 147263
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaa 343  Q
    |||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||||| ||||| ||||||||||||||| ||||    
T  147143 agagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatggagagagaaaaaggaa 147242  T
Q  344 tagagaagataataacatcat 364  Q
     ||||| ||||| | ||||||    
T  147243 gagagacgataagaccatcat 147263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 94967 - 95032
Alignment:
Q  85 gagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    ||||||||||||||| |||||  ||| |||||||||| | ||||| ||| ||||||||||| ||||    
T  94967 gagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggc 95032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 349
Target Start/End: Original strand, 2392 - 2496
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| ||||||||||||||| || |||| ||||||||||| ||  ||| ||| |||| |||| |||||| ||||||||||||||||||| | ||||     
T  2392 gagcaatgatatttgtacatccaattgatgataattttggtgacaatcttgattttctctctttttattggtcaaaaataatggagagagaagaaggaag 2491  T
Q  345 agaga 349  Q
    |||||    
T  2492 agaga 2496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 249028 - 249123
Alignment:
Q  243 aagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||| |||||||||||||||||  ||||||| ||| |||| ||| ||||||| |||| || | |||| | ||||| |||||||||||||||    
T  249028 aagagcaatgatatttgtacatccattccatgacaactttagtgacaaccttgtttttctctcttcttattgatcaaaaacaatggagagagaaaa 249123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 358
Target Start/End: Complemental strand, 29969 - 29852
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagag-aaaagg 340  Q
    ||||| |||| |||||||||||||||||||||||||| ||| || | ||| ||||||| |||| |||| |||| | | ||| | ||||||||| |||| |    
T  29969 aaagatcaatgatatttgtacatccatttaatgacaactttagttacaaccttgtttttctctctttttattgatcagaaacattggagagagaaaaaag 29870  T
Q  341 gaatagagaagataataa 358  Q
    ||| ||||| ||||||||    
T  29869 gaagagagatgataataa 29852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 361
Target Start/End: Original strand, 2158 - 2230
Alignment:
Q  289 aactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaagataataacat 361  Q
    |||||||||||||||| ||||||||| | |||||||||  | |||||||| |||| ||||| |||||||||||    
T  2158 aactttgttttcctctcttttgattgatcaaaaataataaaaagagaaaaaggaagagagaggataataacat 2230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 5254 - 5146
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagagaaga 352  Q
    ||||||||| ||| || || ||||||||||||||| ||||||| |||  ||  |||| |||||| |||||||||||| ||||||||  ||| ||||| ||    
T  5254 atatttgtatatctatatagtgacaattttggtgacaactttgattttttcactttttattggttaaaaataatggaaagagaaaaaagaagagagatga 5155  T
Q  353 taataacat 361  Q
    ||| |||||    
T  5154 taaaaacat 5146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 349
Target Start/End: Complemental strand, 18777 - 18674
Alignment:
Q  245 gagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaat 344  Q
    ||||||| |||||||||||||||||  | ||||| ||| |||||||| || |||| ||||||| | ||| || ||||| ||||||||||||||| ||||     
T  18777 gagcaatgatatttgtacatccattcca-gacaactttagtgataaccttatttttctctattcttattagtcaaaaacaatggagagagaaaaaggaag 18679  T
Q  345 agaga 349  Q
    |||||    
T  18678 agaga 18674  T

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Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 24857 - 24763
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    |||||||  ||||||||||||| |||| |||| |||||| |||| ||| || |||| |||| || | |||||| ||||| |||||||||||||||    
T  24857 agagcaacgatatttgtacatctatttcatgataattttagtgacaaccttatttttctctcttcttattggttaaaaacaatggagagagaaaa 24763  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 31518 - 31592
Alignment:
Q  275 acaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaagggaatagaga 349  Q
    |||||||| |||| |||||| |||| |||| |||| |||||| ||||| ||||||||||||||| |||| |||||    
T  31518 acaatttttgtgacaactttttttttctctcttttcattggttaaaaacaatggagagagaaaaaggaagagaga 31592  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 88994 - 88893
Alignment:
Q  242 aaagagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaaggg 341  Q
    |||||||||| |||||||||||||||| | |||| || ||| |||| ||| || ||||  ||| || | |||||| ||||| ||||||||||||||| ||    
T  88994 aaagagcaatgatatttgtacatccatctcatgataactttagtgacaaccttatttttttcttttcttattggtcaaaaacaatggagagagaaaaagg 88895  T
Q  342 aa 343  Q
    ||    
T  88894 aa 88893  T

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Target: scaffold0258 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 15319 - 15382
Alignment:
Q  85 gagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccag 148  Q
    |||| ||| |||||| ||||| |||| |||||||||| | ||||||||| ||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccag 15382  T

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Target: scaffold0618 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 3545 - 3424
Alignment:
Q  244 agagcaataatatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaat-aatggagagagaaaaggga 342  Q
    |||||||| |||||||||||| ||||| | ||||| ||| |||| ||| || |||| || | || | |||||| |||||| |||||||| |||||| |||    
T  3545 agagcaatgatatttgtacattcatttcacgacaactttagtgacaaccttatttttctttcttcttattggtcaaaaataaatggagaaagaaaaagga 3446  T
Q  343 atagagaagataataacatcat 364  Q
    | ||||| ||||| | ||||||    
T  3445 agagagaggataagaccatcat 3424  T

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Target: scaffold0299 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 11608 - 11543
Alignment:
Q  85 gagataattgaacctcagaccccgagaaggagcacacactcaggtcccaggccaataccaccaggc 150  Q
    |||| ||| |||||| ||||| |||| |||||||||| | ||| ||||| ||||||||||||||||    
T  11608 gagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggc 11543  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 72067 - 72152
Alignment:
Q  253 atatttgtacatccatttaatgacaattttggtgataactttgttttcctctattttgattggtaaaaaataatggagagagaaaa 338  Q
    ||||||||||||| || |  |||||| |||||||| ||| ||| ||| ||| ||| | |||||| |||||||||||| ||||||||    
T  72067 atatttgtacatctatatggtgacaactttggtgacaaccttggttttctcaattcttattggttaaaaataatggaaagagaaaa 72152  T

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