View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9960_2D_low_5 (Length: 1028)

Name: NF9960_2D_low_5
Description: NF9960_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9960_2D_low_5
NF9960_2D_low_5
[»] chr8 (21 HSPs)
chr8 (224-1007)||(41728837-41729620)
chr8 (105-229)||(2137354-2137478)
chr8 (105-229)||(19688094-19688218)
chr8 (105-229)||(27609000-27609124)
chr8 (105-231)||(16277550-16277676)
chr8 (106-231)||(16283446-16283571)
chr8 (105-229)||(14557620-14557744)
chr8 (105-229)||(19208455-19208579)
chr8 (105-229)||(19674437-19674561)
chr8 (105-229)||(28362050-28362174)
chr8 (105-229)||(31489845-31489969)
chr8 (105-229)||(31354520-31354644)
chr8 (114-229)||(18710591-18710706)
chr8 (115-229)||(3329602-3329716)
chr8 (105-229)||(33258719-33258843)
chr8 (115-229)||(12092819-12092933)
chr8 (115-229)||(19286468-19286582)
chr8 (115-229)||(29829328-29829442)
chr8 (111-231)||(44563103-44563223)
chr8 (117-184)||(19518277-19518344)
chr8 (114-231)||(9354627-9354744)
[»] scaffold0089 (3 HSPs)
scaffold0089 (105-229)||(47121-47245)
scaffold0089 (105-231)||(40203-40329)
scaffold0089 (106-229)||(29760-29883)
[»] chr6 (48 HSPs)
chr6 (105-231)||(22934957-22935083)
chr6 (105-231)||(23857402-23857528)
chr6 (105-229)||(26918373-26918497)
chr6 (105-229)||(26988994-26989118)
chr6 (105-229)||(15424396-15424520)
chr6 (105-229)||(24863710-24863834)
chr6 (105-229)||(27000066-27000190)
chr6 (105-229)||(13299030-13299154)
chr6 (105-229)||(24304697-24304821)
chr6 (105-229)||(16749847-16749971)
chr6 (19-231)||(27272657-27272866)
chr6 (115-229)||(4757767-4757881)
chr6 (115-229)||(4525289-4525403)
chr6 (105-229)||(29573006-29573130)
chr6 (123-229)||(4545854-4545960)
chr6 (117-229)||(3696086-3696198)
chr6 (115-229)||(4773009-4773123)
chr6 (105-229)||(30558095-30558219)
chr6 (115-229)||(26116489-26116603)
chr6 (115-229)||(27044390-27044504)
chr6 (115-229)||(27360071-27360185)
chr6 (115-229)||(27450414-27450528)
chr6 (115-229)||(27485132-27485246)
chr6 (105-229)||(16944106-16944230)
chr6 (117-229)||(34463425-34463537)
chr6 (114-229)||(26777694-26777809)
chr6 (19-86)||(27629925-27629992)
chr6 (114-229)||(29549477-29549592)
chr6 (123-229)||(4724213-4724319)
chr6 (123-229)||(28207465-28207571)
chr6 (115-231)||(20160704-20160820)
chr6 (115-231)||(22172011-22172127)
chr6 (115-229)||(29501418-29501532)
chr6 (117-229)||(16674144-16674256)
chr6 (112-231)||(27290447-27290566)
chr6 (115-229)||(27007730-27007844)
chr6 (111-231)||(22457011-22457131)
chr6 (111-231)||(22477350-22477470)
chr6 (111-231)||(14143362-14143482)
chr6 (111-231)||(26787943-26788063)
chr6 (111-231)||(27196316-27196436)
chr6 (111-231)||(27252804-27252924)
chr6 (114-231)||(8892387-8892504)
chr6 (114-231)||(8903622-8903739)
chr6 (114-231)||(13522150-13522267)
chr6 (114-231)||(33374333-33374450)
chr6 (111-231)||(28162656-28162776)
chr6 (114-220)||(27629788-27629894)
[»] chr5 (51 HSPs)
chr5 (105-231)||(30934638-30934764)
chr5 (105-229)||(22999147-22999271)
chr5 (105-231)||(24688188-24688314)
chr5 (105-229)||(11549359-11549483)
chr5 (105-229)||(23718021-23718145)
chr5 (105-229)||(23752483-23752607)
chr5 (105-229)||(33777492-33777616)
chr5 (106-229)||(24970024-24970147)
chr5 (105-229)||(26480397-26480521)
chr5 (105-229)||(2511056-2511180)
chr5 (105-229)||(5637915-5638039)
chr5 (105-229)||(8665508-8665632)
chr5 (105-229)||(9317456-9317580)
chr5 (105-229)||(9548576-9548700)
chr5 (105-229)||(12132160-12132284)
chr5 (105-229)||(15658793-15658917)
chr5 (105-229)||(15758890-15759014)
chr5 (105-229)||(30152023-30152147)
chr5 (105-229)||(41674714-41674838)
chr5 (105-229)||(6874310-6874434)
chr5 (105-229)||(30168474-30168598)
chr5 (114-229)||(34616532-34616647)
chr5 (105-229)||(18375445-18375569)
chr5 (115-229)||(18500763-18500877)
chr5 (115-229)||(28649250-28649364)
chr5 (115-229)||(37771020-37771134)
chr5 (115-229)||(37671516-37671630)
chr5 (115-229)||(37754995-37755109)
chr5 (106-231)||(22888476-22888601)
chr5 (105-229)||(33516361-33516485)
chr5 (123-229)||(31431463-31431569)
chr5 (106-231)||(23892212-23892337)
chr5 (105-229)||(29967099-29967223)
chr5 (105-229)||(30029420-30029544)
chr5 (114-229)||(28959819-28959934)
chr5 (115-229)||(37358676-37358790)
chr5 (106-231)||(25199035-25199160)
chr5 (117-229)||(31826440-31826552)
chr5 (114-229)||(32599505-32599620)
chr5 (115-229)||(3789556-3789670)
chr5 (111-231)||(29889113-29889233)
chr5 (117-229)||(43078269-43078381)
chr5 (117-208)||(24681457-24681548)
chr5 (117-208)||(24723984-24724075)
chr5 (117-208)||(40473603-40473694)
chr5 (114-208)||(33292539-33292633)
chr5 (114-231)||(11325808-11325925)
chr5 (114-231)||(13184679-13184796)
chr5 (114-231)||(33877261-33877378)
chr5 (115-208)||(13324883-13324976)
chr5 (114-231)||(13440525-13440642)
[»] chr3 (61 HSPs)
chr3 (105-231)||(18051219-18051345)
chr3 (105-229)||(8301444-8301568)
chr3 (105-229)||(4796830-4796954)
chr3 (105-229)||(18330626-18330750)
chr3 (105-229)||(29148932-29149056)
chr3 (105-231)||(8295929-8296055)
chr3 (106-231)||(15892881-15893006)
chr3 (105-229)||(4721588-4721712)
chr3 (105-229)||(15741271-15741395)
chr3 (105-229)||(6192273-6192397)
chr3 (105-229)||(35880723-35880847)
chr3 (105-229)||(18277229-18277353)
chr3 (105-229)||(18292530-18292654)
chr3 (105-229)||(18307831-18307955)
chr3 (105-229)||(4416876-4417000)
chr3 (105-229)||(5609499-5609623)
chr3 (105-229)||(5713184-5713308)
chr3 (105-229)||(5724094-5724218)
chr3 (105-229)||(5757259-5757383)
chr3 (105-229)||(5768150-5768274)
chr3 (105-229)||(7996519-7996643)
chr3 (105-229)||(10643027-10643151)
chr3 (105-229)||(28116131-28116255)
chr3 (105-229)||(28339259-28339383)
chr3 (105-229)||(31964650-31964774)
chr3 (105-229)||(47023410-47023534)
chr3 (105-229)||(50134248-50134372)
chr3 (105-229)||(7073169-7073293)
chr3 (114-229)||(22387755-22387870)
chr3 (105-229)||(10396090-10396214)
chr3 (105-229)||(17985133-17985257)
chr3 (115-229)||(6542639-6542753)
chr3 (115-229)||(18242706-18242820)
chr3 (105-229)||(18225148-18225272)
chr3 (111-231)||(18530351-18530471)
chr3 (105-229)||(21674650-21674774)
chr3 (105-229)||(24328116-24328240)
chr3 (111-231)||(16626681-16626801)
chr3 (117-229)||(36997254-36997366)
chr3 (115-229)||(5596534-5596648)
chr3 (105-229)||(5013669-5013793)
chr3 (114-229)||(4346864-4346979)
chr3 (116-229)||(5466953-5467066)
chr3 (117-229)||(48465896-48466008)
chr3 (117-208)||(20577045-20577136)
chr3 (114-229)||(22871033-22871148)
chr3 (114-229)||(22886092-22886207)
chr3 (114-229)||(28021241-28021356)
chr3 (117-208)||(29665168-29665259)
chr3 (117-229)||(11110526-11110638)
chr3 (169-229)||(51782044-51782104)
chr3 (169-228)||(51797133-51797192)
chr3 (123-229)||(8211713-8211819)
chr3 (111-231)||(32292715-32292835)
chr3 (114-229)||(31034294-31034409)
chr3 (114-231)||(4625910-4626027)
chr3 (114-231)||(5652353-5652470)
chr3 (114-231)||(17993959-17994076)
chr3 (115-208)||(20066010-20066103)
chr3 (114-205)||(4893176-4893267)
chr3 (114-208)||(32439120-32439214)
[»] chr7 (34 HSPs)
chr7 (105-229)||(10916890-10917014)
chr7 (105-229)||(16503402-16503526)
chr7 (105-229)||(16518438-16518562)
chr7 (105-229)||(2154570-2154694)
chr7 (105-229)||(11424798-11424922)
chr7 (105-229)||(5127989-5128113)
chr7 (105-229)||(4145145-4145269)
chr7 (105-229)||(9618648-9618772)
chr7 (105-229)||(16736482-16736606)
chr7 (105-229)||(16751536-16751660)
chr7 (105-229)||(17523529-17523653)
chr7 (105-229)||(17529562-17529686)
chr7 (105-229)||(26275116-26275240)
chr7 (105-229)||(26319891-26320015)
chr7 (105-229)||(45387340-45387464)
chr7 (105-226)||(26669939-26670060)
chr7 (105-229)||(5147362-5147486)
chr7 (115-229)||(31564412-31564526)
chr7 (106-231)||(16041321-16041446)
chr7 (105-229)||(26435254-26435378)
chr7 (117-229)||(26537892-26538004)
chr7 (115-229)||(31124927-31125041)
chr7 (105-229)||(24592563-24592687)
chr7 (117-229)||(3445315-3445427)
chr7 (111-237)||(16450012-16450138)
chr7 (159-229)||(11441623-11441693)
chr7 (111-231)||(2109025-2109145)
chr7 (111-231)||(26484697-26484817)
chr7 (111-231)||(39211043-39211163)
chr7 (114-208)||(5159525-5159619)
chr7 (114-231)||(2775365-2775482)
chr7 (111-208)||(18540802-18540899)
chr7 (117-218)||(26485756-26485857)
chr7 (114-231)||(31088484-31088601)
[»] chr4 (24 HSPs)
chr4 (105-229)||(14665029-14665153)
chr4 (105-231)||(17014011-17014137)
chr4 (105-229)||(24592450-24592574)
chr4 (105-229)||(14763440-14763564)
chr4 (105-229)||(5005884-5006008)
chr4 (105-229)||(27163453-27163577)
chr4 (105-229)||(6569864-6569988)
chr4 (105-229)||(40105774-40105898)
chr4 (115-229)||(18800749-18800863)
chr4 (105-229)||(14098552-14098676)
chr4 (105-229)||(31126654-31126778)
chr4 (115-229)||(54833408-54833522)
chr4 (115-229)||(36344651-36344765)
chr4 (111-231)||(15285062-15285182)
chr4 (117-229)||(30753777-30753889)
chr4 (117-229)||(33673934-33674046)
chr4 (111-231)||(15227887-15228007)
chr4 (117-208)||(39850661-39850752)
chr4 (111-231)||(14235659-14235779)
chr4 (106-225)||(1900269-1900388)
chr4 (105-208)||(21969712-21969815)
chr4 (114-208)||(24112682-24112776)
chr4 (114-208)||(34189117-34189211)
chr4 (114-231)||(24460739-24460856)
[»] chr2 (42 HSPs)
chr2 (105-229)||(23128691-23128815)
chr2 (105-231)||(27434567-27434693)
chr2 (105-231)||(28882206-28882332)
chr2 (105-229)||(12655534-12655658)
chr2 (105-231)||(20837910-20838036)
chr2 (105-229)||(11635311-11635435)
chr2 (105-229)||(11641500-11641624)
chr2 (105-229)||(34279441-34279565)
chr2 (105-229)||(21677307-21677431)
chr2 (105-229)||(22926153-22926277)
chr2 (105-229)||(34286346-34286470)
chr2 (105-229)||(34291406-34291530)
chr2 (105-229)||(34861672-34861796)
chr2 (105-229)||(37686034-37686158)
chr2 (105-229)||(37701299-37701423)
chr2 (105-229)||(32049790-32049914)
chr2 (105-229)||(37925485-37925609)
chr2 (107-208)||(13936690-13936791)
chr2 (106-231)||(21703287-21703412)
chr2 (105-229)||(16829463-16829587)
chr2 (105-229)||(16891894-16892018)
chr2 (105-229)||(19416624-19416748)
chr2 (111-231)||(27118686-27118806)
chr2 (105-229)||(31876273-31876397)
chr2 (117-229)||(40233515-40233627)
chr2 (114-229)||(39890075-39890190)
chr2 (115-229)||(37375163-37375277)
chr2 (111-231)||(19456544-19456664)
chr2 (117-208)||(12716748-12716839)
chr2 (117-208)||(27777226-27777317)
chr2 (117-208)||(27803711-27803802)
chr2 (117-208)||(27816984-27817075)
chr2 (117-208)||(39051968-39052059)
chr2 (111-229)||(31891453-31891571)
chr2 (111-231)||(34303426-34303546)
chr2 (117-184)||(9350152-9350219)
chr2 (117-208)||(12586814-12586905)
chr2 (123-229)||(260878-260984)
chr2 (114-231)||(3784655-3784772)
chr2 (114-231)||(16163600-16163717)
chr2 (114-231)||(34157012-34157129)
chr2 (117-231)||(27392973-27393087)
[»] scaffold0143 (1 HSPs)
scaffold0143 (105-229)||(27288-27412)
[»] scaffold0029 (1 HSPs)
scaffold0029 (105-231)||(263-390)
[»] scaffold0350 (1 HSPs)
scaffold0350 (105-229)||(7375-7499)
[»] scaffold0159 (2 HSPs)
scaffold0159 (105-229)||(9202-9326)
scaffold0159 (105-229)||(20011-20135)
[»] chr1 (7 HSPs)
chr1 (105-229)||(28584976-28585100)
chr1 (105-229)||(41793444-41793568)
chr1 (105-229)||(10962665-10962789)
chr1 (105-229)||(51638213-51638337)
chr1 (106-231)||(16208165-16208290)
chr1 (111-231)||(20461082-20461202)
chr1 (111-231)||(28151863-28151983)
[»] scaffold0237 (1 HSPs)
scaffold0237 (105-229)||(15066-15190)
[»] scaffold0144 (1 HSPs)
scaffold0144 (105-229)||(26338-26462)
[»] scaffold0124 (2 HSPs)
scaffold0124 (105-229)||(30449-30572)
scaffold0124 (111-231)||(20390-20510)
[»] scaffold0099 (1 HSPs)
scaffold0099 (111-229)||(46945-47072)
[»] scaffold0038 (1 HSPs)
scaffold0038 (123-229)||(7963-8069)
[»] scaffold0336 (1 HSPs)
scaffold0336 (114-229)||(9571-9686)
[»] scaffold2173 (2 HSPs)
scaffold2173 (24-86)||(1-63)
scaffold2173 (114-220)||(94-200)
[»] scaffold0415 (2 HSPs)
scaffold0415 (115-229)||(6015-6132)
scaffold0415 (189-231)||(2051-2093)
[»] scaffold0558 (1 HSPs)
scaffold0558 (111-227)||(166-282)


Alignment Details
Target: chr8 (Bit Score: 772; Significance: 0; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 772; E-Value: 0
Query Start/End: Original strand, 224 - 1007
Target Start/End: Complemental strand, 41729620 - 41728837
Alignment:
Q  224 gcctcccacgtttctcagacctcgaagaaggctcataaaccggcgaaagcacaggcgaaacggcagtaaaatttctgagagtaatgttattcccaacaaa 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41729620 gcctcccacgtttctcagacctcgaagaaggctcataaaccggcgaaagcacaggcgaaacggcagtaaaatttctgagagtaatgttattcccaacaaa 41729521  T
Q  324 cgctgaatcaggaaacctttgtaaagatttaggcacagtaccatgtaaatcattgttagacaaattcagcacctgtaaccttgagaaatgaatatcagga 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41729520 cgctgaatcaggaaacctttgtaaagatttaggcacagtaccatgtaaatcattgttagacaaattcagcacctgtaaccttgagaaatgaatatcagga 41729421  T
Q  424 atttcaccagaaagggaattatttgcaagattcaaaccagcaagctgagtcaaattagaaagggaaagcggaatagtaccgttgaatttgttattagaca 523  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41729420 atttcaccagaaagggaattatttgcaaggttcaaaccagcaagctgagtcaaattagaaagcgaaagcggaatagtaccgttgaatttgttattagaca 41729321  T
Q  524 aattaacaacagtaagattcttccaaactgagaaatcaggcaaaggcccagataaattattggactgaagataaagaaaagacaagttttttagattgga 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41729320 aattaacaacagtaagattcttccaaactgagaaatcaggcaaaggcccagataaattattggactgaagataaagaaaagacaagttttttagattgga 41729221  T
Q  624 aaaatcacttggaaaaaacccagatattaaattggatctaagactaagaatttcaagagctgaaaggttactgatagtatttggtggaatattgccatga 723  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41729220 aaaatcacttggaaaaaacccagatattaaattggatctaagactaagaatttcaagagctgaaaggttactgatagtatttggtggaatattgccatga 41729121  T
Q  724 aatccgacaccaggtaaacggatagctataactctagacctatcttcattgcaagtaacaccagtccaattatcacaaacagaagaaatttgattccaat 823  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41729120 aatccgacaccaggtaaacggatagctataactctagacctatcttcattgcaagtaacaccagtccaattatcacaaacagaagaactttgattccaat 41729021  T
Q  824 tcaaagtccttgaagggggaaacttgttcacaaaatcaagcaaaacctctttatcttcaacagggtcacaatttccttgccatatacacaacaatatgca 923  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41729020 tcaaagtccttgaagggggaaacttgttcacaaaatcaagcaaaacctctttatcttcaacagggtcacaatttccttgccatatacacaacaatatgca 41728921  T
Q  924 taaaatgtaaagaaatttcatgtttttccacttcaagtagtttctgcaataagcttaatgctgcatagattcaaatgaaagtac 1007  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41728920 taaaatgtaaagaaatttcatgtttttccacttcaagtagtttctgcaataagcttaatgctgcatagattcaaatgaaagtac 41728837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 2137478 - 2137354
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2137478 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 2137379  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  2137378 agcccccacctgatccgttgcctcc 2137354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 19688094 - 19688218
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19688094 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 19688193  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  19688194 agcccccacctgatccgttgcctcc 19688218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 27609124 - 27609000
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27609124 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 27609025  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  27609024 agcccccacctgatccgttgcctcc 27609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 16277550 - 16277676
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  16277550 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 16277649  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  16277650 agcccccacctgatccgttgcctccca 16277676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 16283446 - 16283571
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  16283446 atcaacaagctagacctaccttccctccgataccgatgttgtatgctgagttgcttccgactttactccttagagggcattgtacaaccagacagggcaa 16283545  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
    |||||| |||||||||||||||||||    
T  16283546 gcccccacctgatccgttgcctccca 16283571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 14557620 - 14557744
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  14557620 aatcagcaagctagacctactttccctccgataccaatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 14557719  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||| |||||||||||||||||||    
T  14557720 agccctcgcctgatccgttgcctcc 14557744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 19208579 - 19208455
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  19208579 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 19208480  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  19208479 agcccccacctgatccgttgcctcc 19208455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 19674437 - 19674561
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  19674437 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 19674536  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    | ||||| |||||||||||||||||    
T  19674537 aacccccacctgatccgttgcctcc 19674561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 28362174 - 28362050
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  28362174 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 28362075  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  28362074 agcccccacctgatccgttgcctcc 28362050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 31489969 - 31489845
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  31489969 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 31489870  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  31489869 agccaccacctgatccgttgcctcc 31489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 31354520 - 31354644
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  31354520 aatcagcaagctaggcctactttccctccgataccgatgttatatgccgagttgcttccaactttactccagagagggcattgtacaactagacagggca 31354619  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||| ||||||||    
T  31354620 agcctccacctgatcctttgcctcc 31354644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 18710591 - 18710706
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |||||| | |    
T  18710591 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggtaagccctcac 18710690  T
Q  214 ctgatccgttgcctcc 229  Q
    |||||||| |||||||    
T  18710691 ctgatccgctgcctcc 18710706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 3329716 - 3329602
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||    
T  3329716 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 3329617  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  3329616 tgatccgttgcctcc 3329602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 33258719 - 33258843
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || || |||||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  33258719 aatcagcaagccaggccaaccttccctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 33258818  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  33258819 agcccccacctgatccgttgcctcc 33258843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 12092933 - 12092819
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||||||||||||||| |||||||| |||||||| ||    
T  12092933 ctagaccaacttttcctcctataccaatgttgtatgcggaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 12092834  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  12092833 tgatccgttgcctcc 12092819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 19286468 - 19286582
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| ||||| ||||||||||| || |||||||||||||| ||    
T  19286468 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactaggcagggcaagcccccacc 19286567  T
Q  215 tgatccgttgcctcc 229  Q
    ||| |||||||||||    
T  19286568 tgacccgttgcctcc 19286582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 29829328 - 29829442
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||| |  ||  | ||||| ||||||||||| ||||| |||||||| ||||||||||| |||||||| ||    
T  29829328 ctagaccaacttttcctcctataccaatgttgtacgcagaacttcttccaactttactccagagagggcattgtaccaccagacagggtaagcccccacc 29829427  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  29829428 tgatccgttgcctcc 29829442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 44563103 - 44563223
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  | ||| || || |||||||||||||||||||| |    
T  44563103 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctc 44563202  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||| | ||||||||    
T  44563203 cacctgatccatcgcctccca 44563223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 19518344 - 19518277
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggaca 184  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  19518344 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggaca 19518277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 9354627 - 9354744
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| ||||||  | ||| || || |||||||||||||||||||| || |    
T  9354627 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctactcctcaaagggcactgcacaaccagacagggcaagcctccac 9354726  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  9354727 ctgatccatcgcctccca 9354744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 117; Significance: 4e-59; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 47245 - 47121
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47245 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 47146  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  47145 agcccccacctgatccgttgcctcc 47121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 40329 - 40203
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40329 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 40230  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||| ||||    
T  40229 agcccccacctgatccgttgcccccca 40203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 29760 - 29883
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29760 atcaacaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaa 29859  T
Q  206 gcccccgcctgatccgttgcctcc 229  Q
    |||||| |||||||||||||||||    
T  29860 gcccccacctgatccgttgcctcc 29883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 7e-58; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 22935083 - 22934957
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22935083 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 22934984  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  22934983 agcccccacctgatccgttgcctccca 22934957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 23857528 - 23857402
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23857528 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 23857429  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  23857428 agcccccacctgatccgttgcctccca 23857402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 26918373 - 26918497
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26918373 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 26918472  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  26918473 agcccccacctgatccgttgcctcc 26918497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 26988994 - 26989118
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26988994 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 26989093  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  26989094 agcccccacctgatccgttgcctcc 26989118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 15424520 - 15424396
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  15424520 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaactagacagggca 15424421  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  15424420 agcccccacctgatccgttgcctcc 15424396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 24863710 - 24863834
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24863710 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 24863809  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  24863810 agcccccacctgatccgttgcctcc 24863834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 27000066 - 27000190
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  27000066 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 27000165  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  27000166 agcccccacctgatccgttgcctcc 27000190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 13299154 - 13299030
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  13299154 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 13299055  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  13299054 agcccccacctgatccgttgcctcc 13299030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 24304821 - 24304697
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24304821 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 24304722  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  24304721 agcccccacctgatccgttgcctcc 24304697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 16749847 - 16749971
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  16749847 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggca 16749946  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  16749947 agcccccacctgatccgttgcctcc 16749971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 27272866 - 27272657
Alignment:
Q  19 catcaggaccacctcaggtacccgtgaatgctattgtgcagcaaaagccacagcaaccaccagttcagnnnnnnnnnnnnnnnnnnaatcagcaagctag 118  Q
    |||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||                  ||||||||||  ||    
T  27272866 catcaggaccacctcaagtacctgtgaatgctattgtgcagcagaagccacaacaaccaccagttcagcaacaacaacaacag---aatcagcaagtcag 27272770  T
Q  119 acctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgat 218  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||| ||||||    
T  27272769 acctactttccctccgataccgatgttatatgctgagttgcttccgactctactccagagagggcattgtacaaccagacagggtaagcccccacctgat 27272670  T
Q  219 ccgttgcctccca 231  Q
    |||| ||||||||    
T  27272669 ccgtcgcctccca 27272657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 4757767 - 4757881
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| ||    
T  4757767 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgtacaactagacagggtaagcccccacc 4757866  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  4757867 tgatccgttgcctcc 4757881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 4525289 - 4525403
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| || ||    
T  4525289 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgcacaactagacagggcaagccaccacc 4525388  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  4525389 tgatccgttgcctcc 4525403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 29573006 - 29573130
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||| || || || || ||||| |    
T  29573006 aatcagcaagctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggta 29573105  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  29573106 agcccccacctgatccgttgcctcc 29573130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 4545960 - 4545854
Alignment:
Q  123 actttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgt 222  Q
    ||||| ||||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  4545960 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacctgatccgt 4545861  T
Q  223 tgcctcc 229  Q
    |||||||    
T  4545860 tgcctcc 4545854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 3696086 - 3696198
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||||| || ||||    
T  3696086 agaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacctg 3696185  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  3696186 atccgttgcctcc 3696198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 4773009 - 4773123
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||    
T  4773009 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 4773108  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  4773109 tgatccgttgcctcc 4773123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 30558219 - 30558095
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||  ||  | ||||| || |||||||| ||||| ||||||||||| ||||||||||    
T  30558219 aatcagcaagctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggca 30558120  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  30558119 agccaccacctgatccgttgcctcc 30558095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 26116603 - 26116489
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||||||||||||||  ||  | ||||||||||||||||| ||||| |||||||| || |||||||||||||| || ||    
T  26116603 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccgactttactccagagaggtcattgtacgactagacagggcaagccaccacc 26116504  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  26116503 tgatccgttgcctcc 26116489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 27044390 - 27044504
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||    
T  27044390 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactagacagggcaagcccccacc 27044489  T
Q  215 tgatccgttgcctcc 229  Q
    ||| |||||||||||    
T  27044490 tgacccgttgcctcc 27044504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 27360185 - 27360071
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||||||||||||||| |||||||| |||||||| ||    
T  27360185 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 27360086  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  27360085 tgatccgttgcctcc 27360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 27450528 - 27450414
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||||||||||||||| |||||||| |||||||| ||    
T  27450528 ctagaccaacttttcctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggacattgtacaactagacagggtaagcccccacc 27450429  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  27450428 tgatccgttgcctcc 27450414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 27485132 - 27485246
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||    
T  27485132 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 27485231  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  27485232 tgatccgttgcctcc 27485246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 16944230 - 16944106
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || || |||||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  16944230 aatcagcaagccaggccaaccttccctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 16944131  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  16944130 agcccccacctgatccgttgcctcc 16944106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 34463537 - 34463425
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || ||||| || |||||||| ||||    
T  34463537 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactagacaaggaaagcccccacctg 34463438  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  34463437 atccgttgcctcc 34463425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 26777809 - 26777694
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| || |||||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || |    
T  26777809 gctagaccaaccttccctcctataccgatgttgtatgccgaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccac 26777710  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  26777709 ctgatccgttgcctcc 26777694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 27629992 - 27629925
Alignment:
Q  19 catcaggaccacctcaggtacccgtgaatgctattgtgcagcaaaagccacagcaaccaccagttcag 86  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  27629992 catcaggaccacctcaggtacccgtgaatgctattgtgcaacagaagccacaacaaccaccagttcag 27629925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 29549477 - 29549592
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |||||||| |    
T  29549477 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggtaagcccccac 29549576  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  29549577 ctgatccgttgcctcc 29549592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 4724319 - 4724213
Alignment:
Q  123 actttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgt 222  Q
    ||||| ||||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||| |||||||| || ||||| |||||||| || ||||||||||    
T  4724319 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 4724220  T
Q  223 tgcctcc 229  Q
    |||||||    
T  4724219 tgcctcc 4724213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 28207465 - 28207571
Alignment:
Q  123 actttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgt 222  Q
    ||||| ||||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||| |||||||| || ||||| |||||||| || ||||||||||    
T  28207465 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 28207564  T
Q  223 tgcctcc 229  Q
    |||||||    
T  28207565 tgcctcc 28207571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 20160704 - 20160820
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    |||||||||| || ||||||||||||||||| |||| |||||| || || |||||||| || ||||| ||||| |||||||| || |||||||| || ||    
T  20160704 ctagacctacctttcctccgataccgatgttatatgctgagttactcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacc 20160803  T
Q  215 tgatccgttgcctccca 231  Q
    ||||||||| |||||||    
T  20160804 tgatccgttacctccca 20160820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 22172127 - 22172011
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    |||||||||| || ||||||||||||||||| |||| |||||| || || |||||||| || ||||| ||||| |||||||| || |||||||| || ||    
T  22172127 ctagacctacctttcctccgataccgatgttatatgctgagttactcccaactttacttcacagagggcattgcacaaccaggcaaggcaagcctccacc 22172028  T
Q  215 tgatccgttgcctccca 231  Q
    ||||||||| |||||||    
T  22172027 tgatccgttacctccca 22172011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 29501418 - 29501532
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| || |||||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || ||    
T  29501418 ctagaccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 29501517  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  29501518 tgatccgttgcctcc 29501532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 16674144 - 16674256
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||||    
T  16674144 agaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctg 16674243  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  16674244 atccgttgcctcc 16674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 27290566 - 27290447
Alignment:
Q  112 aagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagccccc 211  Q
    ||||||||||||| || |||| |||||| ||||| |||| ||||||||| |||||| |||| |  ||||| || |  |||||||||||||||||||| ||    
T  27290566 aagctagacctacctttcctctgataccaatgttatatgctgagttgctcccgactctacttctcagagggcactacacaaccagacagggcaagcctcc 27290467  T
Q  212 gcctgatccgttgcctccca 231  Q
     ||||||||||| |||||||    
T  27290466 acctgatccgttacctccca 27290447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 27007730 - 27007844
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||    
T  27007730 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 27007829  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  27007830 tgatccgttgcctcc 27007844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 22457131 - 22457011
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| ||||||  ||||| || |||||| |||| |  | | | || || |||||||||||||||||||| |    
T  22457131 caagctagacctacctttcctctgataccaatgatgtatgccgagttactcccgactctacttctcataaggcactgcacaaccagacagggcaagcctc 22457032  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  22457031 cacctgatccgttgcctccca 22457011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 22477470 - 22477350
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| ||||||  ||||| || |||||| |||| |  | | | || || |||||||||||||||||||| |    
T  22477470 caagctagacctacctttcctctgataccaatgatgtatgccgagttactcccgactctacttctcatatggcactgcacaaccagacagggcaagcctc 22477371  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  22477370 cacctgatccgttgcctccca 22477350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 14143482 - 14143362
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || ||  ||| ||||||||| ||||| |    
T  14143482 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctc 14143383  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  14143382 cacctgatccgttacctccca 14143362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 26787943 - 26788063
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || ||  ||| ||||||||| ||||| |    
T  26787943 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctc 26788042  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  26788043 cacctgatccgttacctccca 26788063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 27196316 - 27196436
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || ||  ||| ||||||||| ||||| |    
T  27196316 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctc 27196415  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  27196416 cacctgatccgttacctccca 27196436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 27252924 - 27252804
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || ||  ||| ||||||||| ||||| |    
T  27252924 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcgcaatcagacaggggaagcctc 27252825  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  27252824 cacctgatccgttacctccca 27252804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 8892504 - 8892387
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  8892504 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 8892405  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  8892404 ctgatccatcgcctccca 8892387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 8903739 - 8903622
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  8903739 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 8903640  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  8903639 ctgatccatcgcctccca 8903622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 13522267 - 13522150
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  13522267 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13522168  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  13522167 ctgatccatcgcctccca 13522150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 33374450 - 33374333
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  33374450 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 33374351  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  33374350 ctgatccatcgcctccca 33374333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 28162656 - 28162776
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| |    
T  28162656 caagctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctc 28162755  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | | |||||| | ||||||||    
T  28162756 cacttgatccatcgcctccca 28162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 220
Target Start/End: Complemental strand, 27629894 - 27629788
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||| |||||||| ||||| || ||||||||||||| ||| || ||||| || ||||| || ||||| |||||||| || || ||||| | ||| ||||    
T  27629894 gctaggcctacttttcctccaatcccgatgttgtatgctgatttacttccaacattacttcagagaggtcattgtacgactaggcagggtaggcctccgc 27629795  T
Q  214 ctgatcc 220  Q
    | |||||    
T  27629794 cagatcc 27629788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 7e-58; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 30934638 - 30934764
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30934638 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 30934737  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  30934738 agcccccacctgatccgttgcctccca 30934764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 22999271 - 22999147
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22999271 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagaggacattgtacaaccagacagggca 22999172  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  22999171 agcccccacctgatccgttgcctcc 22999147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 24688314 - 24688188
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24688314 aatcagcaagctagacctactttccctccgataccgatattgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 24688215  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  24688214 agcccccacctgatccgttgcctccca 24688188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 11549359 - 11549483
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11549359 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 11549458  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  11549459 agcccccacctgatccgttgcctcc 11549483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 23718145 - 23718021
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23718145 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 23718046  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  23718045 agcccccacctgatccgttgcctcc 23718021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 23752607 - 23752483
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23752607 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 23752508  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  23752507 agcccccacctgatccgttgcctcc 23752483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 33777492 - 33777616
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  33777492 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 33777591  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  33777592 agcccccacctgatccgttgcctcc 33777616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 24970024 - 24970147
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24970024 atcaacaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaa 24970123  T
Q  206 gcccccgcctgatccgttgcctcc 229  Q
    |||||| |||||||||||||||||    
T  24970124 gcccccacctgatccgttgcctcc 24970147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 26480397 - 26480521
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  26480397 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 26480496  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  26480497 agcccccacctgatccgttgcctcc 26480521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 2511056 - 2511180
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  2511056 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 2511155  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  2511156 agcctccacctgatccgttgcctcc 2511180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 5637915 - 5638039
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  5637915 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 5638014  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5638015 agcccccacctgatccgttgcctcc 5638039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 8665632 - 8665508
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  8665632 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 8665533  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  8665532 agcctccacctgatccgttgcctcc 8665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 9317456 - 9317580
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  9317456 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 9317555  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  9317556 agcccccacctgatccgttgcctcc 9317580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 9548700 - 9548576
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  9548700 aatcagcaagctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccaaagagggcattgtacaactagacagggta 9548601  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  9548600 agcccccacctgatccgttgcctcc 9548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 12132160 - 12132284
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  12132160 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 12132259  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  12132260 agcccccacctgatccgttgcctcc 12132284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 15658917 - 15658793
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  15658917 aatcagcaagctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 15658818  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  15658817 agcccccacctgatccgttgcctcc 15658793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 15759014 - 15758890
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  15759014 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 15758915  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  15758914 agcctccacctgatccgttgcctcc 15758890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 30152023 - 30152147
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  30152023 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 30152122  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  30152123 agcccccacctgatccgttgcctcc 30152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 41674714 - 41674838
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  41674714 aatcagcaagctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccaaagagggcattgtacaactagacagggta 41674813  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  41674814 agcccccacctgatccgttgcctcc 41674838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 6874310 - 6874434
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  6874310 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagctgcttccaactttactccagagagggcattgtacaactagacagggca 6874409  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  6874410 agcctccacctgatccgttgcctcc 6874434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 30168474 - 30168598
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| |||||||| || ||||||||||    
T  30168474 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggca 30168573  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  30168574 agccaccacctgatccgttgcctcc 30168598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 34616532 - 34616647
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||||||||||||||| |||||||| |||||||| |    
T  34616532 gctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagaggacattgtacaactagacagggtaagcccccac 34616631  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  34616632 ctgatccgttgcctcc 34616647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 18375569 - 18375445
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  18375569 aatcagcaagctagacctacttttcctcctataccaatgttgtatgcagatcttcttccaactttactccagagagggcattgtacaactagacagggta 18375470  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  18375469 agcccccacctgatccgttgcctcc 18375445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 18500877 - 18500763
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||||| || ||    
T  18500877 ctagaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacgactagacagggcaagccaccacc 18500778  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  18500777 tgatccgttgcctcc 18500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 28649250 - 28649364
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||||| || ||    
T  28649250 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacc 28649349  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  28649350 tgatccgttgcctcc 28649364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 37771134 - 37771020
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||||| || ||    
T  37771134 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggtcattgtacgactagacagggcaagccaccacc 37771035  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  37771034 tgatccgttgcctcc 37771020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 37671630 - 37671516
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||| || || || |||||||||||||| || ||    
T  37671630 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactagacagggcaagccaccacc 37671531  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  37671530 tgatccgttgcctcc 37671516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 37754995 - 37755109
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||| |||||||| || ||||| |||||||| || ||    
T  37754995 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggtcattgtacgactagacaaggcaagccaccacc 37755094  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  37755095 tgatccgttgcctcc 37755109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 22888476 - 22888601
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| |||||| || |||||| || | |  ||||| || || |||||||||||||||||    
T  22888476 atcaacaagctagacctaccttccctccgataccaatgttgtatgctgagttactcccgactctatttctcagagggcactgcacaaccagacagggcaa 22888575  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
    ||| || |||||||||||||||||||    
T  22888576 gcctccacctgatccgttgcctccca 22888601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 33516361 - 33516485
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||  ||  | ||||| || |||||||| ||||| ||||||||||| ||||||||||    
T  33516361 aatcagcaagctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggca 33516460  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  33516461 agccaccacctgatccgttgcctcc 33516485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 31431463 - 31431569
Alignment:
Q  123 actttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgt 222  Q
    ||||| ||||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||| |||||||| || |||||||||||||| || ||||||||||    
T  31431463 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacagggcaagccaccacctgatccgt 31431562  T
Q  223 tgcctcc 229  Q
    |||||||    
T  31431563 tgcctcc 31431569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 23892212 - 23892337
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| || ||||||||||| ||  ||||||  ||||||||||||||| |||| |  ||||| || || |||||||||||||||||    
T  23892212 atcaacaagctagacctacctttcctccgataccaatcatgtatgccgagttgcttccgactctacttctcagagggcactgcacaaccagacagggcaa 23892311  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
    ||| || |||||||||||||||||||    
T  23892312 gcctccacctgatccgttgcctccca 23892337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 29967223 - 29967099
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || || |||||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  29967223 aatcagcaagccaggccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 29967124  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  29967123 agcccccacctgatccgttgcctcc 29967099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 30029420 - 30029544
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || || |||||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  30029420 aatcagcaagccaggccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 30029519  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  30029520 agcccccacctgatccgttgcctcc 30029544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 28959934 - 28959819
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || |    
T  28959934 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccac 28959835  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  28959834 ctgatccgttgcctcc 28959819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 37358790 - 37358676
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || ||    
T  37358790 ctagaccaacttttcctcctataccaatgttgtatgcggaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 37358691  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  37358690 tgatccgttgcctcc 37358676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 25199035 - 25199160
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| ||  |||||||||| ||||||||||  ||||| || |||||| |||| |  ||||| || || |||||||||||||||||    
T  25199035 atcaacaagctagacctaccttttctccgataccaatgttgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaa 25199134  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
    ||| || ||||||||||| |||||||    
T  25199135 gcctccacctgatccgttacctccca 25199160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 31826552 - 31826440
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || ||||    
T  31826552 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 31826453  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  31826452 atccgttgcctcc 31826440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 32599620 - 32599505
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| |    
T  32599620 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccac 32599521  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  32599520 ctgatccgttgcctcc 32599505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 3789556 - 3789670
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||    
T  3789556 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 3789655  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  3789656 tgatccgttgcctcc 3789670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 29889233 - 29889113
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| |||||||||| |||| | || || ||| |||| |  ||||| || || || ||||||||||||||||| |    
T  29889233 caagctagacctacctttcctctgataccaatgttgtatgctgagctactcccaactctacttctcagagggcactgcaccaccagacagggcaagcctc 29889134  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  29889133 cacctgatccgttgcctccca 29889113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 43078269 - 43078381
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| |||||||| || |||||||| |||||||| ||||    
T  43078269 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactagacagggtaagcccccacctg 43078368  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  43078369 atccgttgcctcc 43078381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 24681457 - 24681548
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  24681457 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 24681548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 24723984 - 24724075
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  24723984 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 24724075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 40473694 - 40473603
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  40473694 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 40473603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 33292539 - 33292633
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || || |||||||||||    
T  33292539 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 33292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 11325808 - 11325925
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  11325808 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 11325907  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  11325908 ctgatccatcgcctccca 11325925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 13184796 - 13184679
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  13184796 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13184697  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  13184696 ctgatccatcgcctccca 13184679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 33877261 - 33877378
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  33877261 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 33877360  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  33877361 ctgatccatcgcctccca 33877378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 13324976 - 13324883
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || || |||||||||||    
T  13324976 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 13324883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 13440642 - 13440525
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| | | || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  13440642 gctagacctacctttcctctgataccaatgttatatgctaaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 13440543  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  13440542 ctgatccatcgcctccca 13440525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 7e-58; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 18051219 - 18051345
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18051219 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 18051318  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| ||||||||| |||||||||    
T  18051319 agcccccacctgatccgctgcctccca 18051345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 8301568 - 8301444
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8301568 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 8301469  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  8301468 agcccccacctgatccgttgcctcc 8301444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 4796954 - 4796830
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4796954 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 4796855  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  4796854 agcccccacctgatccgttgcctcc 4796830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 18330626 - 18330750
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  18330626 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgaccttactccatagagggcattgtacaaccagacagggca 18330725  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  18330726 agcccccacctgatccgttgcctcc 18330750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 29149056 - 29148932
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  29149056 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggca 29148957  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  29148956 agcccccacctgatccgttgcctcc 29148932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 8295929 - 8296055
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  8295929 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccacagagggcattgtacaaccagacagggca 8296028  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||  ||||||| |||||||||||    
T  8296029 agcccctacctgatctgttgcctccca 8296055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 15893006 - 15892881
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15893006 atcaacaagctagacctactttccctccgataccaatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggcaa 15892907  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
    |||||| |||||||| ||||||||||    
T  15892906 gcccccacctgatcctttgcctccca 15892881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 4721588 - 4721712
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4721588 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 4721687  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||||| |||||||    
T  4721688 agcccccacctgatccgctgcctcc 4721712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 15741395 - 15741271
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15741395 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 15741296  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||| ||||||||||    
T  15741295 agcccccacctgattcgttgcctcc 15741271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 6192273 - 6192397
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  6192273 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 6192372  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||| | |||||||    
T  6192373 agcccccacctgatctgctgcctcc 6192397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 35880723 - 35880847
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  35880723 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccaaacagggca 35880822  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||||| |||||||    
T  35880823 agcccccacctgatccgctgcctcc 35880847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 18277353 - 18277229
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  18277353 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 18277254  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||| |||||||||    
T  18277253 agcccccacctgatcagttgcctcc 18277229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 18292654 - 18292530
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  18292654 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 18292555  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||| |||||||||    
T  18292554 agcccccacctgatcagttgcctcc 18292530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 18307955 - 18307831
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  18307955 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 18307856  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||| |||||||||    
T  18307855 agcccccacctgatcagttgcctcc 18307831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 4416876 - 4417000
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  4416876 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 4416975  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    | ||||| |||||||||||||||||    
T  4416976 aacccccacctgatccgttgcctcc 4417000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 5609623 - 5609499
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  5609623 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 5609524  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  5609523 agccaccacctgatccgttgcctcc 5609499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 5713184 - 5713308
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  5713184 aatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 5713283  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5713284 agcccccacctgatccgttgcctcc 5713308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 5724094 - 5724218
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  5724094 aatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 5724193  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5724194 agcccccacctgatccgttgcctcc 5724218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 5757383 - 5757259
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  5757383 aatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 5757284  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5757283 agcccccacctgatccgttgcctcc 5757259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 5768274 - 5768150
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  5768274 aatcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 5768175  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5768174 agcccccacctgatccgttgcctcc 5768150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 7996519 - 7996643
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  7996519 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 7996618  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  7996619 agcccccacctgatccgttgcctcc 7996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 10643027 - 10643151
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  10643027 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 10643126  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  10643127 agcccccacctgatccgttgcctcc 10643151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 28116255 - 28116131
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  28116255 aatcagcaagctagacctactttccctccgataccgatgttatatgctgaattgcttccaactttactccagagagggcattgtacaactagacagggca 28116156  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| | |||||||||||||||    
T  28116155 agcccccacttgatccgttgcctcc 28116131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 28339259 - 28339383
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  28339259 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 28339358  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  28339359 agccaccacctgatccgttgcctcc 28339383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 31964774 - 31964650
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  31964774 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 31964675  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  31964674 agccaccacctgatccgttgcctcc 31964650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 47023410 - 47023534
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  47023410 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 47023509  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  47023510 agcccccacctgatccgttgcctcc 47023534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 50134372 - 50134248
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  50134372 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 50134273  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  50134272 agccaccacctgatccgttgcctcc 50134248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 7073169 - 7073293
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| |||||||| || ||||| || |    
T  7073169 aatcagcaagctagacctacttttcctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacgactagacaaggta 7073268  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||||||||||||||||||||||||    
T  7073269 agcccccgcctgatccgttgcctcc 7073293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 22387870 - 22387755
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  22387870 gctagaccgacttttcctcctataccaatgttgtatgcagagttgcttccaactttactccatagagggcattgtacaaccagacagggcaagcccccac 22387771  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  22387770 ctgatccgttgcctcc 22387755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 10396090 - 10396214
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || ||||| |||||||| |    
T  10396090 aatcagcaagctagacctactttccctccgatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacaactagacagggta 10396189  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  10396190 agcccccacctgatccgttgcctcc 10396214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 17985257 - 17985133
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||  ||| | ||||| ||| ||||||| ||||| ||||||||||| ||||||||||    
T  17985257 aatcagcaagctagacctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggca 17985158  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  17985157 agccaccacctgatccgttgcctcc 17985133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 6542753 - 6542639
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||| || ||||| |||||||||||||| || ||    
T  6542753 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacaactagacagggcaagccaccacc 6542654  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  6542653 tgatccgttgcctcc 6542639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 18242706 - 18242820
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||    
T  18242706 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 18242805  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  18242806 tgatccgttgcctcc 18242820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 18225148 - 18225272
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||| |||||||| ||||| |||||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  18225148 aatcaacaagctaggcctaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 18225247  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  18225248 agcccccacctgatccgttgcctcc 18225272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 18530351 - 18530471
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||| |||||||||| |||||| || | |||| |||| |  ||||| || || |||||||||||||||||||| |    
T  18530351 caagctagacctacctttcctccgataccaatgttgtatgctgagttactcctgactctacttctcagagggcactgcacaaccagacagggcaagcctc 18530450  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  18530451 cacctgatccgttgcctccca 18530471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 21674650 - 21674774
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| |||||||| || ||||||||||    
T  21674650 aatcagcaagctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccaaagagggcattgtacgactagacagggca 21674749  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  21674750 agccaccacctgatccgttgcctcc 21674774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 24328116 - 24328240
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || || |||||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  24328116 aatcagcaagccaggccaaccttccctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 24328215  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  24328216 agcccccacctgatccgttgcctcc 24328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 16626801 - 16626681
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||| ||| | ||||| ||||| || || ||| |||| | |||||| || || |||||||||||||||||||| |    
T  16626801 caagctagacctacctttcctccgataccaatgatatatgtcgagttactccctactctacttcttagagggcactgcacaaccagacagggcaagcctc 16626702  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  16626701 cacctgatccgttgcctccca 16626681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 36997366 - 36997254
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || ||||    
T  36997366 agaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 36997267  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  36997266 atccgttgcctcc 36997254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 5596648 - 5596534
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| || |||||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || ||    
T  5596648 ctagaccaaccttccctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggcaagccaccacc 5596549  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  5596548 tgatccgttgcctcc 5596534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 5013669 - 5013793
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || ||||| ||||| ||||| |||||||| |  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  5013669 aatcagcaagccaggccaacttttcctcctataccaatgttgtacgcggaacttcttccaactctactccagagagggcattgtacaactagacagggta 5013768  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5013769 agcccccacctgatccgttgcctcc 5013793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 4346979 - 4346864
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| |    
T  4346979 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccac 4346880  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  4346879 ctgatccgttgcctcc 4346864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 116 - 229
Target Start/End: Original strand, 5466953 - 5467066
Alignment:
Q  116 tagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcct 215  Q
    |||||| ||||| ||||  ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || |||    
T  5466953 tagaccaacttttcctcttatacctatgttgtatgcagaactccttccaactctactccagagagggcattgtacaactagacagggcaagccaccacct 5467052  T
Q  216 gatccgttgcctcc 229  Q
    ||||||||||||||    
T  5467053 gatccgttgcctcc 5467066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 48465896 - 48466008
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||||    
T  48465896 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccaaagaggacactgcacgactagacagggtaagcccccacctg 48465995  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  48465996 atccgttgcctcc 48466008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 20577136 - 20577045
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  20577136 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 20577045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 22871148 - 22871033
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| |||||||| || || ||||| |||||||| |    
T  22871148 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccac 22871049  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  22871048 ctgatccgttgcctcc 22871033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 22886207 - 22886092
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| |||||||| || || ||||| |||||||| |    
T  22886207 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccac 22886108  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  22886107 ctgatccgttgcctcc 22886092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 28021241 - 28021356
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || |    
T  28021241 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactatactccagagagggcattgtacaactagacagggcaagccaccac 28021340  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||| || |||||    
T  28021341 ctgatccattacctcc 28021356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 29665259 - 29665168
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  29665259 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 29665168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 11110638 - 11110526
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| ||||| || ||||    
T  11110638 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcctccacctg 11110539  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  11110538 atccgttgcctcc 11110526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 51782044 - 51782104
Alignment:
Q  169 tactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||| ||||||||||| |||||||||||||| || |||||||||||||||||    
T  51782044 tactccagagagggcattgtacaactagacagggcaagccaccacctgatccgttgcctcc 51782104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 51797133 - 51797192
Alignment:
Q  169 tactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgttgcctc 228  Q
    ||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||||||||    
T  51797133 tactccagagagggcattgtacaactagacagggcaagccaccacctgatccgttgcctc 51797192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 8211713 - 8211819
Alignment:
Q  123 actttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgt 222  Q
    ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| |||||||| || || ||||| |||||||| ||||||||||    
T  8211713 acttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggtaagcccccacctgatccgt 8211812  T
Q  223 tgcctcc 229  Q
    |||||||    
T  8211813 tgcctcc 8211819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 32292715 - 32292835
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || || |||| ||||||||| ||| | |    
T  32292715 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagtctc 32292814  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  32292815 cacctgatccgttacctccca 32292835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 31034409 - 31034294
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || || |||| ||||||||| ||||| || |    
T  31034409 gctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 31034310  T
Q  214 ctgatccgttgcctcc 229  Q
    |||||||||| |||||    
T  31034309 ctgatccgttacctcc 31034294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 4625910 - 4626027
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  4625910 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 4626009  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  4626010 ctgatccatcgcctccca 4626027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 5652353 - 5652470
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| ||||||  | ||| || || ||||||||||||||||||||  | |    
T  5652353 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctactcctcaaagggcactgcacaaccagacagggcaagccttcac 5652452  T
Q  214 ctgatccgttgcctccca 231  Q
    |||| |||| ||||||||    
T  5652453 ctgacccgtcgcctccca 5652470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 17994076 - 17993959
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  17994076 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 17993977  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  17993976 ctgatccatcgcctccca 17993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 20066010 - 20066103
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || || |||||||||||    
T  20066010 ctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 20066103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 4893176 - 4893267
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || || ||||||||    
T  4893176 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaa 4893267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 32439120 - 32439214
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || || |||||||||||    
T  32439120 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 32439214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 1e-56; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 10917014 - 10916890
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10917014 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 10916915  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  10916914 agcccccacctgatccgttgcctcc 10916890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 16503526 - 16503402
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16503526 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 16503427  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  16503426 agcccccacctgatccgttgcctcc 16503402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 16518562 - 16518438
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16518562 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 16518463  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  16518462 agcccccacctgatccgttgcctcc 16518438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 2154570 - 2154694
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  2154570 aatcagcaagctagacatactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 2154669  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  2154670 agcccccacctgatccgttgcctcc 2154694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 11424922 - 11424798
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  11424922 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgcacaaccagacagggca 11424823  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  11424822 agcccccacctgatccgttgcctcc 11424798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 5127989 - 5128113
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| |    
T  5127989 aatcagcaagctagacctacttttcctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggta 5128088  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||| |||||||||||||    
T  5128089 agcccccacctaatccgttgcctcc 5128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 4145269 - 4145145
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  4145269 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 4145170  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  4145169 agcccccacctgatccgttgcctcc 4145145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 9618648 - 9618772
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  9618648 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 9618747  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  9618748 agcccccacctgatccgttgcctcc 9618772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 16736606 - 16736482
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  16736606 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 16736507  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||||||| |||||    
T  16736506 agcccccacctgatccgttacctcc 16736482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 16751660 - 16751536
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  16751660 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 16751561  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||||||| |||||    
T  16751560 agcccccacctgatccgttacctcc 16751536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 17523529 - 17523653
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  17523529 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 17523628  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||||||| |||||    
T  17523629 agcccccacctgatccgttacctcc 17523653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 17529686 - 17529562
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  17529686 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 17529587  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||||||||| |||||    
T  17529586 agcccccacctgatccgttacctcc 17529562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 26275240 - 26275116
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  26275240 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 26275141  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  26275140 agcccccacctgatccgttgcctcc 26275116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 26320015 - 26319891
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  26320015 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 26319916  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  26319915 agcccccacctgatccgttgcctcc 26319891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 45387340 - 45387464
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  45387340 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 45387439  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  45387440 agcccccacctgatccgttgcctcc 45387464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 105 - 226
Target Start/End: Complemental strand, 26670060 - 26669939
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  26670060 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 26669961  T
Q  205 agcccccgcctgatccgttgcc 226  Q
    ||||||| ||||||||||||||    
T  26669960 agcccccacctgatccgttgcc 26669939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 5147486 - 5147362
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  5147486 aatcaacaagctagacctacttttcctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 5147387  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5147386 agcccccacctgatccgttgcctcc 5147362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 31564526 - 31564412
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| ||    
T  31564526 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacattgtacaactagacagggtaagcccccacc 31564427  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  31564426 tgatccgttgcctcc 31564412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 16041321 - 16041446
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||  ||||| || |||||| |||| |  ||||| || || |||||||||||||||||    
T  16041321 atcaacaagctagacctaccttccctccgataccaatgttgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaa 16041420  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
    ||| || |||||||||||||||||||    
T  16041421 gcctccacctgatccgttgcctccca 16041446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 26435254 - 26435378
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  26435254 aatcagcaagctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggta 26435353  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  26435354 agcccccacctgatccgttgcctcc 26435378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 26538004 - 26537892
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| ||||| |||||| | || |||||||||||||| || ||||    
T  26538004 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtgcgactagacagggcaagccaccacctg 26537905  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  26537904 atccgttgcctcc 26537892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 31124927 - 31125041
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||    
T  31124927 ctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacattgtacaactagacagggcaagccaccacc 31125026  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  31125027 tgatccgttgcctcc 31125041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 24592687 - 24592563
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || || |||||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  24592687 aatcagcaagccaggccaaccttccctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 24592588  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  24592587 agcccccacctgatccgttgcctcc 24592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 3445315 - 3445427
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || ||||    
T  3445315 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 3445414  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  3445415 atccgttgcctcc 3445427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 16450138 - 16450012
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||| ||| | ||||  ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| |    
T  16450138 caagctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctc 16450039  T
Q  211 cgcctgatccgttgcctcccacgtttc 237  Q
    | |||||||| |||||||||| |||||    
T  16450038 cacctgatcctttgcctcccaggtttc 16450012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 11441623 - 11441693
Alignment:
Q  159 cttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgttgcctcc 229  Q
    ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || |||||||||||||||||    
T  11441623 cttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctgatccgttgcctcc 11441693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 2109145 - 2109025
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || || |||| ||||||||| ||||| |    
T  2109145 caagctagacctacctttcctctgataccaatgatatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctc 2109046  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  2109045 cacctgatccgttacctccca 2109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 26484697 - 26484817
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || || |||| ||||||||| ||||| |    
T  26484697 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctc 26484796  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  26484797 cacctgatccgttacctccca 26484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 39211163 - 39211043
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || || |||| ||||||||| ||||  |    
T  39211163 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcttc 39211064  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||||||| |||||||    
T  39211063 cacctgatccgttacctccca 39211043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 5159525 - 5159619
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || || |||||||||||    
T  5159525 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 5159619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 2775365 - 2775482
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||| | |||| ||||| ||| |||||| |||| |  ||||| || || |||| ||||||||| ||||| || |    
T  2775365 gctagacctacctttcctctgataccaatgctatatgctgagtagctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctccac 2775464  T
Q  214 ctgatccgttgcctccca 231  Q
    |||||||||| |||||||    
T  2775465 ctgatccgttacctccca 2775482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 18540802 - 18540899
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||||||||||||||| |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || || |||| ||||||||| |||||    
T  18540802 caagctagacctacttttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcc 18540899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 26485857 - 26485756
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||||    
T  26485857 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctg 26485758  T
Q  217 at 218  Q
    ||    
T  26485757 at 26485756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 31088601 - 31088484
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  31088601 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 31088502  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  31088501 ctgatccatcgcctccca 31088484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 1e-56; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 14665029 - 14665153
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14665029 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagaggacattgtacaaccagacagggca 14665128  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  14665129 agcccccacctgatccgttgcctcc 14665153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 17014011 - 17014137
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  17014011 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccaaagagggcattgtacaaccagacagggca 17014110  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  17014111 agcccccacctgatccgttgcctccca 17014137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 24592574 - 24592450
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24592574 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 24592475  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  24592474 agcccccacctgatccgttgcctcc 24592450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 14763564 - 14763440
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  14763564 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggca 14763465  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  14763464 agcccccacctgatccgttgcctcc 14763440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 5005884 - 5006008
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||||    
T  5005884 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacaaggca 5005983  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  5005984 agcccccacctgatccgttgcctcc 5006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 27163577 - 27163453
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  27163577 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 27163478  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  27163477 agcccccacctgatccgttgcctcc 27163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 6569864 - 6569988
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  6569864 aatcagcaagctagacctactttccctccgataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggta 6569963  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  6569964 agcccccacctgatccgttgcctcc 6569988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 40105898 - 40105774
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||  | ||||| ||||||||||| ||||| |||||||| || ||||||||||    
T  40105898 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgaacttcttccaactttactccagagagggcattgtacgactagacagggca 40105799  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  40105798 agccaccacctgatccgttgcctcc 40105774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 18800863 - 18800749
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| ||||| |||||||| || |||||||||||||| || ||    
T  18800863 ctagaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagagggcattgtacgactagacagggcaagccaccacc 18800764  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  18800763 tgatccgttgcctcc 18800749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 14098552 - 14098676
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| ||||||||||    
T  14098552 aatcagcaagctagacctacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggca 14098651  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  14098652 agccaccacctgatccgttgcctcc 14098676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 31126778 - 31126654
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||  ||| | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  31126778 aatcagcaagctaggcctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggta 31126679  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||| |||||||||||    
T  31126678 agcccccacctgacccgttgcctcc 31126654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 54833408 - 54833522
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| ||||| ||||||||||| || |||||||||||||| ||    
T  54833408 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccaaagagggcattgtacaactaggcagggcaagcccccacc 54833507  T
Q  215 tgatccgttgcctcc 229  Q
    ||| |||||||||||    
T  54833508 tgacccgttgcctcc 54833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 36344765 - 36344651
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||    
T  36344765 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 36344666  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  36344665 tgatccgttgcctcc 36344651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 15285182 - 15285062
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||| ||| | ||| | ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| |    
T  15285182 caagctagacctacctttcctccgataccaatgctatatttcgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctc 15285083  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  15285082 cacctgatccgttgcctccca 15285062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 30753777 - 30753889
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||||||||| || ||||    
T  30753777 agaccaacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacaactagacagggcaagccaccacctg 30753876  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  30753877 atccgttgcctcc 30753889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 33674046 - 33673934
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||| |||||||| || || || || ||||||||||| || || |    
T  33674046 agaccaacttttcctcctataccaatgttgtatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcctccaccgg 33673947  T
Q  217 atccgttgcctcc 229  Q
    | |||||||||||    
T  33673946 acccgttgcctcc 33673934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 15227887 - 15228007
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||| ||| | ||||  ||||| || |||||| |||| |  ||||| || ||||||||||||||||| ||||| |    
T  15227887 caagctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgtacaaccagacagggtaagcctc 15227986  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||| ||||||||||    
T  15227987 cacctgatccattgcctccca 15228007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 39850661 - 39850752
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  39850661 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 39850752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 14235779 - 14235659
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||||||||||  ||| |||| |||||| | || | || ||| || ||||||||||||||||||||||| |    
T  14235779 caagctagacctacctttcctctgataccaatgttgtatgccgagctgctcccgactctgcttcttaaagggcactgtacaaccagacagggcaagcctc 14235680  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||| | || ||||||||||    
T  14235679 cacctaaccctttgcctccca 14235659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 1900269 - 1900388
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| || ||||||||||| ||| ||||||  ||||| || |||||| |||| |  ||||| || || ||||||||||| || ||    
T  1900269 atcaacaagctagacctacctttcctccgataccaatgctgtatgccgagttactcccgactctacttctcagagggcactgcacaaccagacatggtaa 1900368  T
Q  206 gcccccgcctgatccgttgc 225  Q
    ||| || |||||||||||||    
T  1900369 gcctccacctgatccgttgc 1900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 21969712 - 21969815
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| |||||||||||||| || || || ||||    
T  21969712 aatcagcaagctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaactctactccagagaggacattgtacgactaggcaaggca 21969811  T
Q  205 agcc 208  Q
    ||||    
T  21969812 agcc 21969815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 24112682 - 24112776
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || || |||||||||||    
T  24112682 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 24112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 34189211 - 34189117
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || || |||||||||||    
T  34189211 gctagaccaacttttcctcctataccaatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 34189117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 24460856 - 24460739
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  24460856 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 24460757  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  24460756 ctgatccatcgcctccca 24460739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 1e-56; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 23128815 - 23128691
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23128815 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 23128716  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  23128715 agcccccacctgatccgttgcctcc 23128691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 27434693 - 27434567
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  27434693 aatcagcaagctagacctactttccctccgataccgatgttgtatgctgagttgcttccggctttactccatagagggcattgtacaaccagacagggca 27434594  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  27434593 agcccccacctgatccgttgcctccca 27434567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 28882206 - 28882332
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  28882206 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 28882305  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| |||||||||||||||||||    
T  28882306 agcccccacctgatccgttgcctccca 28882332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 12655534 - 12655658
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  12655534 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaaccagacagggca 12655633  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  12655634 agcccccacctgatccgttgcctcc 12655658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 20837910 - 20838036
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  20837910 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccatagagggcattgtacaactagacagggca 20838009  T
Q  205 agcccccgcctgatccgttgcctccca 231  Q
    ||||||| ||||||| |||||||||||    
T  20838010 agcccccacctgatctgttgcctccca 20838036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 11635435 - 11635311
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  11635435 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 11635336  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  11635335 agcccccacctgatccgttgcctcc 11635311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 11641624 - 11641500
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  11641624 aatcagcaagctagacctactttccctccgatacagatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 11641525  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  11641524 agcccccacctgatccgttgcctcc 11641500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 34279441 - 34279565
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  34279441 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 34279540  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  34279541 agcccccacctgatccgttgcctcc 34279565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 21677431 - 21677307
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  21677431 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 21677332  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  21677331 agcctccacctgatccgttgcctcc 21677307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 22926277 - 22926153
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  22926277 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 22926178  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  22926177 agccaccacctgatccgttgcctcc 22926153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 34286346 - 34286470
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  34286346 aatcagcaagctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 34286445  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  34286446 agcccccacctgatccgttgcctcc 34286470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 34291406 - 34291530
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  34291406 aatcagcaagctagacctactttccctccaataccgatgttatatgctgagttgcttccaactttactccaaagagggcattgtacaactagacagggta 34291505  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  34291506 agcccccacctgatccgttgcctcc 34291530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 34861672 - 34861796
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  34861672 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 34861771  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  34861772 agcccccacctgatccgttgcctcc 34861796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 37686158 - 37686034
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  37686158 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 37686059  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  37686058 agcccccacctgatccgttgcctcc 37686034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 37701423 - 37701299
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  37701423 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 37701324  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  37701323 agcccccacctgatccgttgcctcc 37701299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 32049790 - 32049914
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  32049790 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 32049889  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    | ||||| || || |||||||||||    
T  32049890 aacccccaccggacccgttgcctcc 32049914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 37925485 - 37925609
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  37925485 aatcagcaagctaggcctactttccctccgataccaatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 37925584  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| || || |||||||||||    
T  37925585 agcccccacccgacccgttgcctcc 37925609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 13936791 - 13936690
Alignment:
Q  107 tcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaag 206  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||    
T  13936791 tcagcaagccagacctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaag 13936692  T
Q  207 cc 208  Q
    ||    
T  13936691 cc 13936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 21703412 - 21703287
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| |||||| || |||||| |||| |  ||||| || || ||||||||||||| |||    
T  21703412 atcaacaagctagacctaccttccctccgataccaatgttgtatgctgagttactcccgactctacttctcagagggcactgcacaaccagacaggacaa 21703313  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
    ||| || |||||||||||||||||||    
T  21703312 gcctccacctgatccgttgcctccca 21703287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 16829587 - 16829463
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||  ||  | ||||| || |||||||| ||||| ||||||||||| ||||||||||    
T  16829587 aatcagcaagctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggca 16829488  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  16829487 agccaccacctgatccgttgcctcc 16829463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 16891894 - 16892018
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||  ||  | ||||| || |||||||| ||||| ||||||||||| ||||||||||    
T  16891894 aatcagcaagctaggcctacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggca 16891993  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  16891994 agccaccacctgatccgttgcctcc 16892018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 19416748 - 19416624
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||| || || ||||||||||| ||||||||||||||||  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  19416748 aatcagcaagccaggccaactttccctcctataccgatgttgtatgcagaacttcttccaactctactccagagaggtcattgtacaactagacagggta 19416649  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  19416648 agcccccacctgatccgttgcctcc 19416624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 27118686 - 27118806
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| |    
T  27118686 caagctagacctaccttccctccgataccgatgttgtatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctc 27118785  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||| ||||||||    
T  27118786 cacctgatccgtcgcctccca 27118806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 31876273 - 31876397
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| |||||||| |  ||  | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  31876273 aatcagcaagctaggcctacttttcctcctataccaatgttgtacgcggaacttcttccaactctactccagagagggcattgtacaactagacagggta 31876372  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  31876373 agcccccacctgatccgttgcctcc 31876397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 40233515 - 40233627
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    ||||| ||||| ||||| ||||| |||||||||| |||| | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||||    
T  40233515 agaccaacttttcctcctataccaatgttgtatgctgagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctg 40233614  T
Q  217 atccgttgcctcc 229  Q
    |||||||||||||    
T  40233615 atccgttgcctcc 40233627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 39890075 - 39890190
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| || |||||||| ||||| ||||||||||| |||||||||||||| || |    
T  39890075 gctagaccaacttttcctcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggcaagccaccac 39890174  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  39890175 ctgatccgttgcctcc 39890190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 37375163 - 37375277
Alignment:
Q  115 ctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcc 214  Q
    ||||||| ||||| ||||| ||||| ||||||||||  ||| | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||    
T  37375163 ctagaccaacttttcctcctatacctatgttgtatgcagagcttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacc 37375262  T
Q  215 tgatccgttgcctcc 229  Q
    |||||||||||||||    
T  37375263 tgatccgttgcctcc 37375277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 19456664 - 19456544
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||| ||| | ||||  ||||| || |||||| |||| |  | ||| || || |||||||||||||||||||| |    
T  19456664 caagctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcatagggcactgcacaaccagacagggcaagcctc 19456565  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  19456564 cacctgatccgttgcctccca 19456544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 12716839 - 12716748
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  12716839 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 12716748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 27777226 - 27777317
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  27777226 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 27777317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 27803711 - 27803802
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  27803711 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 27803802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 27816984 - 27817075
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  27816984 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 27817075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 39052059 - 39051968
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| |||||||| || || || || |||||||||||    
T  39052059 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 39051968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 31891571 - 31891453
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| |    
T  31891571 caagctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctc 31891472  T
Q  211 cgcctgatccgttgcctcc 229  Q
    | |||||||||||||||||    
T  31891471 cacctgatccgttgcctcc 31891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 34303546 - 34303426
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| |    
T  34303546 caagctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctc 34303447  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||| ||||||||    
T  34303446 cacctgatccgtcgcctccca 34303426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 9350219 - 9350152
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggaca 184  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  9350219 agaccaacttttcctcctataccgatgttatatgctgagttgcttccaactttactccagagaggaca 9350152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 12586814 - 12586905
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcc 208  Q
    ||||| ||||| ||||| ||||||||||| |||| ||||| |||||| ||||||||||| |||||||| || || || || |||||||||||    
T  12586814 agaccaacttttcctcctataccgatgttatatgctgagtcgcttccaactttactccagagaggacactgcacgactaggcagggcaagcc 12586905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 260984 - 260878
Alignment:
Q  123 actttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgt 222  Q
    ||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| |||||||| || || || |||||||| |||||||| ||||||| ||    
T  260984 acttttcctcctataccaatgttgtatgcagaacttcttccaactttactccagagaggacactgcacgactagacagggtaagcccccacctgatctgt 260885  T
Q  223 tgcctcc 229  Q
    |||||||    
T  260884 tgcctcc 260878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 3784655 - 3784772
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  3784655 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 3784754  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  3784755 ctgatccatcgcctccca 3784772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 16163600 - 16163717
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  16163600 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 16163699  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  16163700 ctgatccatcgcctccca 16163717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 34157012 - 34157129
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||||||||| || |||| |||||| ||||| |||| ||| || || |||||| |||| |  | ||| || || |||||||||||||||||||| || |    
T  34157012 gctagacctacctttcctctgataccaatgttatatgctgaattactcccgactctacttctcaaagggcactgcacaaccagacagggcaagcctccac 34157111  T
Q  214 ctgatccgttgcctccca 231  Q
    ||||||| | ||||||||    
T  34157112 ctgatccatcgcctccca 34157129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 27392973 - 27393087
Alignment:
Q  117 agacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctg 216  Q
    |||||||| || ||||||||||| ||| ||||||  ||| |||| |||||||| || |  | ||| || || |||||||| ||||||||||| || |||     
T  27392973 agacctacctttcctccgataccaatgatgtatgccgagctgctcccgactttgcttctcaaagggcactgcacaaccaggcagggcaagcctccaccta 27393072  T
Q  217 atccgttgcctccca 231  Q
    | |||||||||||||    
T  27393073 acccgttgcctccca 27393087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 109; Significance: 3e-54; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 27288 - 27412
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27288 aatcagcaagctagacctactttccctccgataccgatgttatatgctgagttgcttccgactttactccatagagggcattgtacaaccagacagggca 27387  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  27388 agcccccacctgatccgttgcctcc 27412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 100; Significance: 6e-49; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 390 - 263
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatg-ttgagttgcttccgactttactccatagaggacattgtacaaccagacagggc 203  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  390 aatcagcaagctagacctactttccctccgataccgatgttatatgctttagttgcttccgactttactccatagagggcattgtacaaccagacagggc 291  T
Q  204 aagcccccgcctgatccgttgcctccca 231  Q
    |||||||| || ||||||||||||||||    
T  290 aagcccccaccggatccgttgcctccca 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 7499 - 7375
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  7499 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 7400  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  7399 agcccccacctgatccgttgcctcc 7375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 9326 - 9202
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  9326 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 9227  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  9226 agccaccacctgatccgttgcctcc 9202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 20011 - 20135
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  20011 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 20110  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  20111 agccaccacctgatccgttgcctcc 20135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 28584976 - 28585100
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  28584976 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggta 28585075  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  28585076 agcccccacctgatccgttgcctcc 28585100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 41793568 - 41793444
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||    
T  41793568 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttactccagagagggcattgtacaactagacagggca 41793469  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  41793468 agcctccacctgatccgttgcctcc 41793444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 10962665 - 10962789
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||| ||||| ||||||||||| |||||||| |    
T  10962665 aatcagcaagctaggcctactttccctccgataccgatgttatatgctgagttgcttccaactttgctccagagagggcattgtacaactagacagggta 10962764  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  10962765 agcccccacctgatccgttgcctcc 10962789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 51638213 - 51638337
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| |||||||| || || ||||| |    
T  51638213 aatcagcaagctaggcctactttcccttcgataccaatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactaggcagggta 51638312  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| ||||| |||||||||||    
T  51638313 agcccccacctgacccgttgcctcc 51638337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 16208290 - 16208165
Alignment:
Q  106 atcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaa 205  Q
    |||| |||||||||||||| || ||||||||||| |||||||||   ||||| || |||||| |||| |  ||||| || || |||||||||||||| ||    
T  16208290 atcaacaagctagacctacctttcctccgataccaatgttgtataccgagttactcccgactctacttctcagagggcactgcacaaccagacagggaaa 16208191  T
Q  206 gcccccgcctgatccgttgcctccca 231  Q
     || || |||||||||||||||||||    
T  16208190 acctccacctgatccgttgcctccca 16208165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 20461082 - 20461202
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||  ||| | ||||  ||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| |    
T  20461082 caagctagacctacctttcctccgatactaatgctatatgccgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctc 20461181  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  20461182 cacctgatccgttgcctccca 20461202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 28151863 - 28151983
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || |||| |||||| ||| | |||| ||||||||| |||||| |||| |  ||||| || || |||| ||||||||| ||||| |    
T  28151863 caagctagacctacctttcctctgataccaatgctatatgctgagttgctcccgactctacttctcagagggcactgcacaatcagacaggggaagcctc 28151962  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | ||||||| ||| |||||||    
T  28151963 cacctgatctgttacctccca 28151983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 15190 - 15066
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||  ||  | ||||| ||||||||||| ||||| ||||||||||| |||||||| |    
T  15190 aatcagcaagctagacctacttttcctcctataccaatgttgtatgcagatcttcttccaactttactccagagagggcattgtacaactagacagggta 15091  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  15090 agcccccacctgatccgttgcctcc 15066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 65; Significance: 5e-28; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 26462 - 26338
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||  ||| | ||||| ||| ||||||| ||||| ||||||||||| |||||||| |    
T  26462 aatcagcaagctaggcctacttttcctcctataccaatgttgtatgcagagcttcttccaactctactccagagagggcattgtacaactagacagggta 26363  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    ||||||| |||||||||||||||||    
T  26362 agcccccacctgatccgttgcctcc 26338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 30449 - 30572
Alignment:
Q  105 aatcagcaagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggca 204  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||  ||  | ||||| || |||||||| ||||| ||||||||||| ||||||||||    
T  30449 aatcagcaagctagacctactttcc-tcctataccaatgttgtatgcagaacttcttccaaccttactccagagaggtcattgtacaactagacagggca 30547  T
Q  205 agcccccgcctgatccgttgcctcc 229  Q
    |||| || |||||||||||||||||    
T  30548 agccaccacctgatccgttgcctcc 30572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 20390 - 20510
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || || |||||||| |||||||||| |||||| || |||||| |||| |  ||||| || || |||||||||||||||||||| |    
T  20390 caagctagacctacctttcccccgataccaatgttgtatgctgagttactcccgactctacttctcagagggcactgcacaaccagacagggcaagcctc 20489  T
Q  211 cgcctgatccgttgcctccca 231  Q
    | |||||||||||||||||||    
T  20490 cacctgatccgttgcctccca 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 47072 - 46945
Alignment:
Q  111 caagctagacctacttt-ccctccgatacc-gatgttgtatgttgagttgcttccgac---tttactccatagagg-acattgtacaacc-agacagggc 203  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||  |   ||||||||||||||| ||||||||||||| |||||||||    
T  47072 caagctagacctacttttccctccgatacccgatgttgtatgctgagttgcttccccccgatttactccatagagggacattgtacaacctagacagggc 46973  T
Q  204 aa--gcccccgcctgatccgttgcctcc 229  Q
    ||  |||||| |||||||||||||||||    
T  46972 aaacgcccccacctgatccgttgcctcc 46945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 7963 - 8069
Alignment:
Q  123 actttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgcctgatccgt 222  Q
    ||||| ||||| ||||| |||||||||| |||||||||||| ||| ||||||| ||||| |||||||| || ||||| |||||||| || ||||||||||    
T  7963 acttttcctcctataccaatgttgtatgctgagttgcttccaactctactccagagagggcattgtacgactagacaaggcaagccaccacctgatccgt 8062  T
Q  223 tgcctcc 229  Q
    |||||||    
T  8063 tgcctcc 8069  T

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Target: scaffold0336 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 9571 - 9686
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    |||||||| ||||| ||||| ||||| ||||||||||  ||  | ||||| ||| ||||||| ||||| |||||||| || ||||||||||||||||| |    
T  9571 gctagaccaacttttcctcctatacctatgttgtatgcagaacttcttccaactctactccagagagggcattgtacgactagacagggcaagcccccac 9670  T
Q  214 ctgatccgttgcctcc 229  Q
    ||||||||||||||||    
T  9671 ctgatccgttgcctcc 9686  T

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Target: scaffold2173 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold2173
Description:

Target: scaffold2173; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 1 - 63
Alignment:
Q  24 ggaccacctcaggtacccgtgaatgctattgtgcagcaaaagccacagcaaccaccagttcag 86  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||    
T  1 ggaccacctcaggtacccgtgaatgctattgtgcaacagaagccacaacaaccaccagttcag 63  T

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Target: scaffold2173; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 220
Target Start/End: Original strand, 94 - 200
Alignment:
Q  114 gctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccccgc 213  Q
    ||||| |||||||| ||||| || ||||||||||||| ||| || ||||| || ||||| || ||||| |||||||| || || ||||| ||||| ||||    
T  94 gctaggcctacttttcctccaatcccgatgttgtatgctgatttacttccaacattacttcagagaggtcattgtacgactaggcagggtaagcctccgc 193  T
Q  214 ctgatcc 220  Q
    | |||||    
T  194 cagatcc 200  T

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Target: scaffold0415 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 115 - 229
Target Start/End: Original strand, 6015 - 6132
Alignment:
Q  115 ctagaccta-ctttccctccgataccgatgttg-tatgttgagttgcttccgacttt-actccatagaggacattgtacaaccagacagggcaagccccc 211  Q
    ||||||||| |||| ||||| |||||||||||  |||| |||||||||||| ||||| |||||| ||||| |||||||| || |||||||||||||| ||    
T  6015 ctagacctaacttttcctcctataccgatgtttatatgctgagttgcttccaacttttactccaaagagggcattgtacgactagacagggcaagccacc 6114  T
Q  212 gcctgatccgttgcctcc 229  Q
     |||||||||||||||||    
T  6115 acctgatccgttgcctcc 6132  T

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Target: scaffold0415; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 2093 - 2051
Alignment:
Q  189 acaaccagacagggcaagcccccgcctgatccgttgcctccca 231  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  2093 acaaccagacagggcaagcctccacctgatccgttgcctccca 2051  T

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Target: scaffold0558 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 282 - 166
Alignment:
Q  111 caagctagacctactttccctccgataccgatgttgtatgttgagttgcttccgactttactccatagaggacattgtacaaccagacagggcaagcccc 210  Q
    |||||||||||||| || ||||||||||| ||| | ||||  ||||| || |||||| |||| |  ||||| || ||  |||||||||| |||||||| |    
T  282 caagctagacctacctttcctccgataccaatgctatatgccgagttactcccgactctacttctcagagggcactgctcaaccagacatggcaagcctc 183  T
Q  211 cgcctgatccgttgcct 227  Q
    | |||||||||||||||    
T  182 cacctgatccgttgcct 166  T

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