View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9961_low_47 (Length: 239)

Name: NF9961_low_47
Description: NF9961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9961_low_47
NF9961_low_47
[»] chr3 (9 HSPs)
chr3 (1-225)||(1770655-1770879)
chr3 (177-222)||(12516191-12516236)
chr3 (176-225)||(17143786-17143835)
chr3 (133-218)||(21649375-21649460)
chr3 (141-225)||(431353-431437)
chr3 (144-225)||(9801121-9801201)
chr3 (153-222)||(12108401-12108470)
chr3 (72-209)||(20622307-20622444)
chr3 (143-225)||(12731598-12731680)
[»] chr4 (8 HSPs)
chr4 (142-225)||(12683756-12683839)
chr4 (141-224)||(14003102-14003185)
chr4 (148-218)||(17110675-17110745)
chr4 (145-225)||(15514598-15514678)
chr4 (165-225)||(16012508-16012568)
chr4 (149-225)||(29157080-29157156)
chr4 (142-225)||(15742190-15742273)
chr4 (171-225)||(47253277-47253331)
[»] chr2 (16 HSPs)
chr2 (141-225)||(18135841-18135925)
chr2 (141-226)||(3586333-3586418)
chr2 (143-225)||(15825126-15825208)
chr2 (152-225)||(20120328-20120401)
chr2 (144-225)||(12168945-12169027)
chr2 (142-223)||(19050474-19050555)
chr2 (153-225)||(45714977-45715049)
chr2 (155-218)||(24157350-24157413)
chr2 (148-215)||(24318890-24318957)
chr2 (70-225)||(30638462-30638617)
chr2 (142-225)||(36267469-36267552)
chr2 (176-225)||(18770319-18770368)
chr2 (109-225)||(10923202-10923318)
chr2 (132-220)||(27846561-27846649)
chr2 (153-225)||(29137883-29137955)
chr2 (132-224)||(36022422-36022514)
[»] chr1 (16 HSPs)
chr1 (143-225)||(34273059-34273141)
chr1 (142-225)||(16050365-16050448)
chr1 (146-225)||(26977715-26977794)
chr1 (144-220)||(4601529-4601605)
chr1 (142-225)||(22414746-22414829)
chr1 (143-225)||(2612700-2612782)
chr1 (151-225)||(12177366-12177440)
chr1 (176-225)||(5671775-5671824)
chr1 (149-225)||(16299611-16299687)
chr1 (142-225)||(18246114-18246197)
chr1 (133-225)||(16030357-16030449)
chr1 (142-225)||(14255067-14255150)
chr1 (149-216)||(21098891-21098958)
chr1 (142-216)||(48637521-48637596)
chr1 (155-225)||(52565564-52565634)
chr1 (132-225)||(43344480-43344572)
[»] chr5 (6 HSPs)
chr5 (109-222)||(25537343-25537456)
chr5 (145-225)||(22865735-22865815)
chr5 (177-225)||(26994643-26994691)
chr5 (192-225)||(22903114-22903147)
chr5 (169-225)||(227715-227771)
chr5 (150-218)||(18799759-18799827)
[»] chr8 (8 HSPs)
chr8 (142-225)||(24507428-24507511)
chr8 (132-225)||(23269207-23269300)
chr8 (163-225)||(21416730-21416792)
chr8 (161-225)||(3459521-3459585)
chr8 (134-225)||(30477604-30477695)
chr8 (150-216)||(4565439-4565505)
chr8 (132-189)||(23497208-23497265)
chr8 (154-214)||(24576631-24576691)
[»] scaffold0002 (1 HSPs)
scaffold0002 (132-225)||(121048-121141)
[»] chr7 (10 HSPs)
chr7 (161-218)||(1979052-1979109)
chr7 (142-225)||(13292160-13292243)
chr7 (171-225)||(5863187-5863241)
chr7 (177-225)||(34854249-34854297)
chr7 (152-218)||(5925519-5925585)
chr7 (148-222)||(7486522-7486596)
chr7 (143-224)||(9867977-9868058)
chr7 (132-225)||(16987129-16987222)
chr7 (78-225)||(9135398-9135545)
chr7 (142-225)||(12644756-12644839)
[»] chr6 (12 HSPs)
chr6 (144-225)||(34187272-34187353)
chr6 (143-224)||(9277338-9277419)
chr6 (143-220)||(9292061-9292138)
chr6 (143-223)||(19331719-19331799)
chr6 (142-225)||(12449620-12449703)
chr6 (146-225)||(19305439-19305518)
chr6 (143-225)||(20148289-20148371)
chr6 (143-225)||(22184457-22184539)
chr6 (176-225)||(9403177-9403226)
chr6 (100-225)||(34064124-34064249)
chr6 (143-225)||(31295572-31295654)
chr6 (176-225)||(14080489-14080537)
[»] scaffold0140 (1 HSPs)
scaffold0140 (70-225)||(6197-6352)
[»] scaffold0101 (1 HSPs)
scaffold0101 (142-224)||(10756-10838)
[»] scaffold0054 (1 HSPs)
scaffold0054 (177-224)||(68838-68885)
[»] scaffold0294 (1 HSPs)
scaffold0294 (179-225)||(280-326)
[»] scaffold0291 (2 HSPs)
scaffold0291 (132-225)||(8614-8706)
scaffold0291 (177-224)||(15468-15515)
[»] scaffold0023 (1 HSPs)
scaffold0023 (192-225)||(95847-95880)
[»] scaffold0205 (1 HSPs)
scaffold0205 (176-220)||(22891-22935)
[»] scaffold0013 (1 HSPs)
scaffold0013 (153-216)||(4470-4533)
[»] scaffold0074 (1 HSPs)
scaffold0074 (171-225)||(35253-35307)
[»] scaffold0505 (1 HSPs)
scaffold0505 (132-225)||(7846-7939)
[»] scaffold0360 (1 HSPs)
scaffold0360 (176-225)||(13927-13976)


Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 1770655 - 1770879
Alignment:
Q  1 tgcgcttgtgtttattcgtctatagagtaatataagtattaacattgtaaacggatttgatctctctaggagaacggatgagtggcatcggtggtgaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1770655 tgcgcttgtgtttattcgtctatagagtaatataagtattaacattgtaaacggatttgatctctctaggagaacggatgagtggcaacggtggtgaata 1770754  T
Q  101 atgtttcagtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaag 200  Q
    ||| || ||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  1770755 atgctttagtgtgacggtgatggtttttgaaacggaggcattgagtctttgcggtggaaggaaaggtgtctgcaagcatgttagtactccgacgctcaag 1770854  T
Q  201 ttagtaatggaactgagaaagagtg 225  Q
    ||||||||||||||||| |||||||    
T  1770855 ttagtaatggaactgaggaagagtg 1770879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 12516191 - 12516236
Alignment:
Q  177 cacgttagtactcagacgctcaagttagtaatggaactgagaaaga 222  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||    
T  12516191 cacgttagcactccgacgctcaagttagtaatggaactgagaaaga 12516236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 17143835 - 17143786
Alignment:
Q  176 gcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  17143835 gcacgttagcactccgacgctcaagtcagtaatggaactgagaaagagtg 17143786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 21649375 - 21649460
Alignment:
Q  133 cggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgaga 218  Q
    |||||||  |||||||| ||||||||| |||||||  ||||||||||||||| || |  ||| |||||| ||||||||||||||||    
T  21649375 cggtggcgatgagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcaccccaacgatcaagtcagtaatggaactgaga 21649460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 431437 - 431353
Alignment:
Q  141 ttgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| ||||||||| |||||||  || ||  |||||||| |||  ||||||||||| | |||||||||||||||||||||    
T  431437 ttgagtcttcgcggtggaaagaaaggtgcctacagacacgttagcacttcgacgctcaagtcaataatggaactgagaaagagtg 431353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 9801201 - 9801121
Alignment:
Q  144 agtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||| || |||||| |||||||  ||||||||||||||| ||||| || ||||||| |||||| |||| |||||||||||    
T  9801201 agtcttcgcagtggaacgaaaggtgcctgcaagcacgttagcactca-acactcaagtcagtaatagaacagagaaagagtg 9801121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 12108401 - 12108470
Alignment:
Q  153 ggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaaga 222  Q
    ||||||| |||||||   |||| ||| ||||  |||| ||||||||||||||||||||||||||||||||    
T  12108401 ggtggaatgaaaggtgcatgcatgcatgttaccactccgacgctcaagttagtaatggaactgagaaaga 12108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 209
Target Start/End: Original strand, 20622307 - 20622444
Alignment:
Q  72 gaacggatgagtggcatcggtggtgaataatgtttcagtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtatct 171  Q
    ||||||||||||| || |||||||  |||||||||| ||||||||| || |||||  || ||||  || ||||||||| || ||| || |||||||  ||    
T  20622307 gaacggatgagtgacaacggtggtagataatgtttcggtgtgacggcaacgatttccggtacggccgcgttgagtcttcgcagtgaaacgaaaggttcct 20622406  T
Q  172 gcaagcacgttagtactcagacgctcaagttagtaatg 209  Q
    ||| ||| ||||  |||  ||||||||||| |||||||    
T  20622407 gcaggcatgttaacactttgacgctcaagtcagtaatg 20622444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 12731680 - 12731598
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||| | ||||||| ||| |||  || ||| || |||||||||| |||||||| || | |||||||||||||||||||||    
T  12731680 gagtcttcgaggtggaacgaatggtgcctacaaccatgttagtactccgacgctcacgtcattaatggaactgagaaagagtg 12731598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 12683756 - 12683839
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||||||| |||||||  ||||| ||||||||| ||||  |||||||||||||||||| |||||||||||||||    
T  12683756 tgagtctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtg 12683839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 14003185 - 14003102
Alignment:
Q  141 ttgagtctttgcggtggaaggaaaggtatctgcaagca-cgttagtactcagacgctcaagttagtaatggaactgagaaagagt 224  Q
    ||||||||||||||||||| |||||||  ||| ||||| |||||| |||  ||||||||||| ||||||||||||||||||||||    
T  14003185 ttgagtctttgcggtggaacgaaaggttcctg-aagcaacgttagcactatgacgctcaagtcagtaatggaactgagaaagagt 14003102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 17110675 - 17110745
Alignment:
Q  148 tttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgaga 218  Q
    |||||||||||| |||| ||  ||||||||||||||| |||| |||| |||||| |||||||||| |||||    
T  17110675 tttgcggtggaacgaaatgtgcctgcaagcacgttagcactccgacgatcaagtcagtaatggaattgaga 17110745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 15514678 - 15514598
Alignment:
Q  145 gtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||| ||||||||| ||| |||  ||| | ||||||||| ||||  |||||||||| |||||||||||||| ||||||||    
T  15514678 gtcttcgcggtggaacgaagggtgcctgtaggcacgttagcactccaacgctcaagtcagtaatggaactgaaaaagagtg 15514598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 16012568 - 16012508
Alignment:
Q  165 ggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||| ||||| ||||||||  |||| ||||||||||| |||||||||||||||| ||||||    
T  16012568 ggtacctgcaggcacgttaacactccgacgctcaagtcagtaatggaactgagatagagtg 16012508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 29157080 - 29157156
Alignment:
Q  149 ttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||||| |||||||   ||||  |||||| | ||||  ||||||||||||||||||||||||||||| ||||    
T  29157080 ttgcggtggaacgaaaggtgcatgcagacacgtttgcactccaacgctcaagttagtaatggaactgagaaaaagtg 29157156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 15742273 - 15742190
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| | ||||||  |||||||  ||||  ||||||||| ||||  |||||||||| |||||||||||||||||| ||||    
T  15742273 tgagtcttcgtggtggagcgaaaggtgcctgctggcacgttagcactcttacgctcaagtcagtaatggaactgagaaaaagtg 15742190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 47253277 - 47253331
Alignment:
Q  171 tgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||| ||| ||||| ||||  |||||||||| |||||||||||||||||||||||    
T  47253277 tgcaggcatgttagcactccaacgctcaagtcagtaatggaactgagaaagagtg 47253331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 18135841 - 18135925
Alignment:
Q  141 ttgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||  |||||| | |||||||  ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18135841 ttgagtcttcacggtgggatgaaaggtgcctgtaggcacgttagtactctgacgctcaagttagtaatggaactgagaaagagtg 18135925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 3586333 - 3586418
Alignment:
Q  141 ttgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtga 226  Q
    ||||||||||||||||||| |||||||   |||  ||||||||| |||| ||||||||||| |||||||||||||||||| |||||    
T  3586333 ttgagtctttgcggtggaatgaaaggtgcatgccggcacgttaggactccgacgctcaagtcagtaatggaactgagaaaaagtga 3586418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 15825126 - 15825208
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| ||||||| |||| || |||||| ||||||||| |||  |||||||||||  ||||||||||||||||||||||    
T  15825126 gagtctttgtggtggaacgaaatgtgtctgcaggcacgttagcactttgacgctcaagtcggtaatggaactgagaaagagtg 15825208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 20120328 - 20120401
Alignment:
Q  152 cggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| ||||||| |||||| ||||||||| |||| ||| ||||||| ||||||| |||||||||||||||    
T  20120328 cggtggaacgaaaggtgtctgcaggcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtg 20120401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 12168945 - 12169027
Alignment:
Q  144 agtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgc-tcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||||| ||||||| |||||| |||| |||  ||||  |||| |||||| |||||||||||| ||||||||||    
T  12168945 agtctttgcggtggaacgaaaggtgtctgcaggcacattaacactccaacgcttcaagtcagtaatggaactaagaaagagtg 12169027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 19050555 - 19050474
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagag 223  Q
    ||||| || ||||||||| ||||||||| ||||  | |||||| |||| ||||||||||| |||||| ||||| ||||||||    
T  19050555 tgagtgttcgcggtggaacgaaaggtatttgcagacccgttagcactctgacgctcaagtcagtaatagaactaagaaagag 19050474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 45714977 - 45715049
Alignment:
Q  153 ggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||| |||||||   |||| ||||||||| ||||  |||||||||| ||||||| |||||||||||||||    
T  45714977 ggtggaacgaaaggtgcatgcaggcacgttagcactccaacgctcaagtcagtaatgaaactgagaaagagtg 45715049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 24157413 - 24157350
Alignment:
Q  155 tggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgaga 218  Q
    ||||| |||||||  || || ||||||||| |||| ||||||||||| ||||||||||||||||    
T  24157413 tggaacgaaaggtgcctacatgcacgttagcactctgacgctcaagtcagtaatggaactgaga 24157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 24318890 - 24318957
Alignment:
Q  148 tttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactg 215  Q
    |||||||||||| ||||||   ||||| ||||||||| | || |||| ||||||||||||||||||||    
T  24318890 tttgcggtggaacgaaaggcgcctgcaggcacgttagcattccgacgatcaagttagtaatggaactg 24318957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 30638462 - 30638617
Alignment:
Q  70 gagaacggatgagtggcatcggtggtgaataatgtttcagtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtat 169  Q
    |||||||||||||||||| |||| | | ||||||     ||||||||||||||  || ||| | |||||  ||||||| | ||||||||| ||||| | |    
T  30638462 gagaacggatgagtggcaacggttgcggataatgcactggtgtgacggtaatggcttctggtagggtggtgttgagtcatcgcggtggaaagaaagatgt 30638561  T
Q  170 ctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    || ||  |||||||  |||  |||||||| || |||||||||||| ||||||||||    
T  30638562 ctacagacacgttaacacttcgacgctcatgtcagtaatggaactaagaaagagtg 30638617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 36267469 - 36267552
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| || |||||| |||||||  ||||| ||| ||||  ||||  |||||||||| ||||||| |||||||||||||||    
T  36267469 tgagtcttcgcagtggaatgaaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtg 36267552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 18770319 - 18770368
Alignment:
Q  176 gcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| |||| ||||||||||| ||||||| || ||||||||||||    
T  18770319 gcacgttagcactctgacgctcaagtcagtaatgaaattgagaaagagtg 18770368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 10923318 - 10923202
Alignment:
Q  109 gtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaat 208  Q
    |||||||||||||| | |  ||||||||||   | |||||| ||||||||| ||||||| | || | ||||||||  |||| ||| ||||||| ||| ||    
T  10923318 gtgtgacggtaatggtctccggaacggtggtgattagtcttcgcggtggaacgaaaggtgtatgtaggcacgttatcactccgacactcaagtcagttat 10923219  T
Q  209 ggaactgagaaagagtg 225  Q
    |||||| | ||||||||    
T  10923218 ggaacttataaagagtg 10923202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 27846649 - 27846561
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaa 220  Q
    ||||||||| |||||||| || || | | |||| ||  ||||| ||||||||| ||||  ||| |||||| ||||||||||||||||||    
T  27846649 acggtggcaatgagtcttcgcagttggacgaaaagtgcctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagaaa 27846561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 29137883 - 29137955
Alignment:
Q  153 ggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||| ||||| | |||||| | ||||||| || | ||||||||||| | ||||| |||||||||||||||    
T  29137883 ggtggaacgaaagatgtctgcaggtacgttagcacaccgacgctcaagtcattaatgcaactgagaaagagtg 29137955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 36022422 - 36022514
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagt 224  Q
    ||||||||| ||||||||||  || ||| ||||||||| || | ||||||||  ||||  |||||||||| |||| ||  |||||||||||||    
T  36022422 acggtggcaatgagtctttgtagtagaacgaaaggtatatgtaggcacgttaacactctaacgctcaagtcagtattgagactgagaaagagt 36022514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 34273059 - 34273141
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||||||||| | |||||||| ||||||||||||||| ||||  | |||||||| ||||| |||||||||||||||||    
T  34273059 gagtctttgcggtgggacgaaaggtacctgcaagcacgttagcactccaatgctcaagtcagtaacggaactgagaaagagtg 34273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 16050365 - 16050448
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| ||||||||  |||||||||||||| ||||||||| ||||  |||||||||| | | |||||||||||||||||||    
T  16050365 tgagtcttcgcggtggatagaaaggtatctgcaggcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtg 16050448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 26977715 - 26977794
Alignment:
Q  146 tctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||| |||||||  ||||| ||||||||| ||||  |||||||||| ||||||||||| |||||||||||    
T  26977715 tctttgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtg 26977794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 4601605 - 4601529
Alignment:
Q  144 agtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaa 220  Q
    |||||| ||||||||| |||||||  ||||| ||||||||| |||| ||||||||||| ||||||| ||||||||||    
T  4601605 agtcttcgcggtggaacgaaaggtgactgcaggcacgttagcactccgacgctcaagtcagtaatgaaactgagaaa 4601529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 22414746 - 22414829
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||||||| |||||||  | ||| ||||||||| |||| ||||||||||| ||||||| |||||| ||| ||||    
T  22414746 tgagtctttgcggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtg 22414829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 2612782 - 2612700
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||| |||| ||||||| ||||||  |||||||||| | | |||||||||| |||| |||||||||| |||||||    
T  2612782 gagtctttgcggaggaacgaaaggtgtctgcagacacgttagtattgaaacgctcaagtcagtattggaactgaggaagagtg 2612700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 225
Target Start/End: Original strand, 12177366 - 12177440
Alignment:
Q  151 gcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| |||||||  || || ||||||||| |||| ||| ||||||| |||||||||||||||||||||||    
T  12177366 gcggtggaacgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtg 12177440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 5671775 - 5671824
Alignment:
Q  176 gcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  5671775 gcacgttagcactccaacgctcaagttagtaatggaactgagaaagagtg 5671824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 16299687 - 16299611
Alignment:
Q  149 ttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||||| |||| || |||||| |||| |||| |||| |||| |||||| ||||||| |||||||||||||||    
T  16299687 ttgcggtggaacgaaacgtgtctgcatgcacattagcactccgacgttcaagtaagtaatgaaactgagaaagagtg 16299611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 18246114 - 18246197
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| ||||||||| ||||||| |||| ||||||||||  ||||  |||||||||| |||| | ||| ||||||||||||    
T  18246114 tgagtcttggcggtggaacgaaaggtgtctgtaagcacgttaacactccaacgctcaagtgagtattagaattgagaaagagtg 18246197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 16030357 - 16030449
Alignment:
Q  133 cggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||  ||||||||  |||||||| ||||||| |||||| ||||||||  | ||| | |||||||| ||||||||||||||  |||||||    
T  16030357 cggtggcgatgagtcttcacggtggaatgaaaggtgtctgcaggcacgttatcagtcaaatgctcaagtcagtaatggaactgaataagagtg 16030449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 14255150 - 14255067
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| | ||||||| ||| |||  ||||||||||| ||| ||||  |||||||||| | ||||| |||||||||||||||    
T  14255150 tgagtcttcgtggtggaacgaagggtgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtg 14255067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 21098958 - 21098891
Alignment:
Q  149 ttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactga 216  Q
    ||||||||||| |||||||  ||||| |||| |||| |||| |||| |||||| ||||||||||||||    
T  21098958 ttgcggtggaacgaaaggtggctgcaggcacattagcactccgacgatcaagtcagtaatggaactga 21098891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 48637521 - 48637596
Alignment:
Q  142 tgagtctt-tgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactga 216  Q
    |||||||| |||||| ||| |||||||  ||||| |||||| || |||| ||||||||||| ||||||||||||||    
T  48637521 tgagtcttctgcggtagaacgaaaggtgcctgcaggcacgtcagcactctgacgctcaagtcagtaatggaactga 48637596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 52565564 - 52565634
Alignment:
Q  155 tggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||| |||||||  |||||  |||||||| |||| ||||||||||| ||||| |||||||| ||||||||    
T  52565564 tggaacgaaaggtgcctgcagacacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtg 52565634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 43344572 - 43344480
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||  |||||||||||||||| | ||||||| ||||||   ||||||| ||||  |||||||||| |||| || |||| ||||||||||    
T  43344572 acggtggcgatgagtctttgcggtgggatgaaaggtgtctgcagaaacgttagcactcgaacgctcaagtcagtattgaaact-agaaagagtg 43344480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 25537343 - 25537456
Alignment:
Q  109 gtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaat 208  Q
    |||||||||||| | ||| ||| |||| |||   ||||||| ||||||||| |||||||  ||||||||||||||| ||||  ||||||||| | |||||    
T  25537343 gtgtgacggtaacggtttctggcacggcggcgaagagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcactccaacgctcaagattgtaat 25537442  T
Q  209 ggaactgagaaaga 222  Q
    ||||||||||||||    
T  25537443 ggaactgagaaaga 25537456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 22865735 - 22865815
Alignment:
Q  145 gtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||| || |||||| |||||||   |||| | ||||||| |||  |||||||||||||||||||||||||||||| ||||    
T  22865735 gtcttcgcagtggaacgaaaggtgcatgcaggtacgttagcactttgacgctcaagttagtaatggaactgagaaaaagtg 22865815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 26994691 - 26994643
Alignment:
Q  177 cacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| |||| ||||||||||| |||||||||| ||||||||||||    
T  26994691 cacgttagcactccgacgctcaagtcagtaatggaattgagaaagagtg 26994643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 22903114 - 22903147
Alignment:
Q  192 acgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||| |||||||||||||||||||||||    
T  22903114 acgctcaagtcagtaatggaactgagaaagagtg 22903147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 227771 - 227715
Alignment:
Q  169 tctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||| ||||||||| ||||| ||||||||||||  | || |||||||||||||||    
T  227771 tctgcaggcacgttagcactcaaacgctcaagttaccattgaaactgagaaagagtg 227715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 18799759 - 18799827
Alignment:
Q  150 tgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgaga 218  Q
    |||||||||| ||||| |  |||||  |||||||| |||| |||| |||||| ||||||||||||||||    
T  18799759 tgcggtggaacgaaagattcctgcagtcacgttagcactccgacgatcaagtcagtaatggaactgaga 18799827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 24507428 - 24507511
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||||||  ||||||| |||||| ||||||||||||||  ||| |||||| | |||||||| ||||||||||||    
T  24507428 tgagtctttgcggtggagcgaaaggtgtctgcatgcacgttagtactccaacgatcaagtcaataatggaaatgagaaagagtg 24507511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 23269207 - 23269300
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||  |||||||||||||||||| ||||||| ||| || ||| ||||| ||||  || || |||| |||||||||||||| ||||||||    
T  23269207 acggtggcgatgagtctttgcggtggaacgaaaggtgtctacaggcaagttagcactccaacacttaagtcagtaatggaactgataaagagtg 23269300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 21416730 - 21416792
Alignment:
Q  163 aaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||| |||||| || |||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  21416730 aaggtgtctgcatgctcgttagcactccgacgctcaagtcagtaatgaaactgagaaagagtg 21416792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 3459585 - 3459521
Alignment:
Q  161 gaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||  ||||| ||||||||| |||| | ||||||||| ||||||||||||||| |||||||    
T  3459585 gaaaggtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtg 3459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 30477604 - 30477695
Alignment:
Q  134 ggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||| |||| ||| ||||||  | ||||| | |||||| ||||||||| ||||  |||||||||| ||||| | |||||||||||||||    
T  30477604 ggtggcaatgagacttcgcggtgagacgaaagatgtctgcatgcacgttagcactccaacgctcaagtcagtaacgaaactgagaaagagtg 30477695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 4565505 - 4565439
Alignment:
Q  150 tgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactga 216  Q
    |||||||||| ||||||| |||||| ||| ||||| |||| |||  |||||||||||||| ||||||    
T  4565505 tgcggtggaacgaaaggtgtctgcaggcatgttagcactccgacaatcaagttagtaatgaaactga 4565439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 23497265 - 23497208
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactc 189  Q
    ||||||||  ||||||||||| |||||| |||||||||||||| ||| ||||| ||||    
T  23497265 acggtggcgatgagtctttgcagtggaacgaaaggtatctgcacgcatgttagcactc 23497208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 24576691 - 24576631
Alignment:
Q  154 gtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaact 214  Q
    |||||| |||||||  ||||| ||||||||  |||| ||||||||||| ||||||||||||    
T  24576691 gtggaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaact 24576631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 121141 - 121048
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| |||  ||||||||||||| |||||||  ||  || ||||||||||||| || ||| |||| |||||||||||||||||||||||    
T  121141 acggtggcaatgaagctttgcggtggaatgaaaggtgcctagaaacacgttagtactctgatgcttaagtcagtaatggaactgagaaagagtg 121048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 1979052 - 1979109
Alignment:
Q  161 gaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgaga 218  Q
    |||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  1979052 gaaaggtgcctgcaagcacgttagtactctgacgctcaagtcagtaatggaactgaga 1979109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 13292243 - 13292160
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| | ||||||||||||||| |||||| | ||||||| ||||  |||||||||| ||||||| |||||| ||||||||    
T  13292243 tgagtcttcgtggtggaaggaaaggtgtctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtg 13292160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 5863187 - 5863241
Alignment:
Q  171 tgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  5863187 tgcaagcacgttagcactcaaacgctcaagtcagtaatcgaactgagaaagagtg 5863241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 34854249 - 34854297
Alignment:
Q  177 cacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  34854249 cacgttagcactctgacgctcaagttagtaatgaaactgagaaagagtg 34854297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 5925585 - 5925519
Alignment:
Q  152 cggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgaga 218  Q
    |||||||| ||||||| |||||| ||||||||| ||||  ||| |||||| ||||||||||||||||    
T  5925585 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgaga 5925519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 148 - 222
Target Start/End: Original strand, 7486522 - 7486596
Alignment:
Q  148 tttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaaga 222  Q
    |||||||||||| |||||||   |||| ||||||||| ||||  |||||||| | ||||||||||||||||||||    
T  7486522 tttgcggtggaatgaaaggtgcatgcaggcacgttagcactccaacgctcaattcagtaatggaactgagaaaga 7486596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 9868058 - 9867977
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagt 224  Q
    ||||||| ||||||| | |||||||   |||| | ||||||| |||| ||||||||||| ||||||||||||||| ||||||    
T  9868058 gagtcttcgcggtgggacgaaaggtgcatgcaggaacgttagcactctgacgctcaagtcagtaatggaactgaggaagagt 9867977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 16987222 - 16987129
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||| |||| |||||||| ||||||||| |||||||   |||  ||||||||| |||| ||| ||||||  |||||||||| ||||||||||||    
T  16987222 acggcggcaatgagtcttcgcggtggaacgaaaggtgcatgcgggcacgttagcactctgacactcaagccagtaatggaattgagaaagagtg 16987129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 225
Target Start/End: Complemental strand, 9135545 - 9135398
Alignment:
Q  78 atgagtggcatcggtggtgaataatgtttcagtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtatctgcaagc 177  Q
    |||||||||| | |||| |||||||| ||| |||||||||||| | |||   | |||| ||  || ||||||  |||||||| |||||||   |  | ||    
T  9135545 atgagtggcagcagtggcgaataatgcttcggtgtgacggtaacggtttccagtacggcggtgttaagtcttcacggtggaacgaaaggtgcatataggc 9135446  T
Q  178 acgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||| ||||  |||||||||| |||||||||| ||||||||||||    
T  9135445 acgttagcactctaacgctcaagtcagtaatggaattgagaaagagtg 9135398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 12644756 - 12644839
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||  |||||||| |||||||   |||| ||| ||||| |||| |||||||| || |||||||||||||||||| ||||    
T  12644756 tgagtcttcacggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtcagtaatggaactgagaaaaagtg 12644839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 34187272 - 34187353
Alignment:
Q  144 agtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||||| ||||||| ||||||  |||||||| || |  || ||||||| |||||||||||||||||||||||    
T  34187272 agtctttgcggtggaacgaaaggtgtctgcagacacgttagcacaccaacactcaagtcagtaatggaactgagaaagagtg 34187353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 9277419 - 9277338
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagt 224  Q
    ||||||||||||||||| |||||||  |||||  |||||||| |||   |||||||||| |||| |||||||||||||||||    
T  9277419 gagtctttgcggtggaacgaaaggttcctgcagacacgttagcactataacgctcaagtcagtattggaactgagaaagagt 9277338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 9292138 - 9292061
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaa 220  Q
    |||||||| |||||||| |||||||  ||||||||||||||| || |  |||||||||| |||| |||||||||||||    
T  9292138 gagtctttacggtggaacgaaaggtgcctgcaagcacgttagcacgctaacgctcaagtcagtattggaactgagaaa 9292061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 19331799 - 19331719
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagag 223  Q
    ||||||| ||||||||| |||||||   |||| | |||||||||||| |||||| |||| |||||||||||| ||||||||    
T  19331799 gagtcttcgcggtggaacgaaaggtgcttgcaggtacgttagtactccgacgcttaagtcagtaatggaactaagaaagag 19331719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 12449703 - 12449620
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||| | ||||| | ||||||| |||| | ||||||||| |||| ||||||||||| ||||||||| |||| ||||||||    
T  12449703 tgagtcttcgtggtgggacgaaaggtgtctgtaggcacgttagcactctgacgctcaagtcagtaatggagctgaaaaagagtg 12449620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 19305439 - 19305518
Alignment:
Q  146 tctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||||||||||| |||||||  ||  | ||||||||| ||| | |||||||||| ||||||||||||||| |||||||    
T  19305439 tctttgcggtggaacgaaaggttcctagaggcacgttagcacttaaacgctcaagtcagtaatggaactgagtaagagtg 19305518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 20148289 - 20148371
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||||||||||| |||| ||   ||||  |||||||| ||||   |||||||||||||||||||| ||||||||||||    
T  20148289 gagtctttgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtg 20148371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 22184539 - 22184457
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||||||||||| |||| ||   ||||  |||||||| ||||   |||||||||||||||||||| ||||||||||||    
T  22184539 gagtctttgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtg 22184457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 9403177 - 9403226
Alignment:
Q  176 gcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||||||||    
T  9403177 gcacgttagaactccgacgctcaagtcaataatggaactgagaaagagtg 9403226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 225
Target Start/End: Original strand, 34064124 - 34064249
Alignment:
Q  100 aatgtttcagtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaa 199  Q
    ||||||||||||||||||||| || |||||| | |  || | ||||||||  |||| ||| ||||||| | |||| ||||||||  |||  |||| ||||    
T  34064124 aatgtttcagtgtgacggtaacgacttttggtatgacggtaatgagtcttcacggtagaacgaaaggtgtgtgcaggcacgttaacactatgacgttcaa 34064223  T
Q  200 gttagtaatggaactgagaaagagtg 225  Q
    || ||||||| |||| ||||||||||    
T  34064224 gtcagtaatgaaactaagaaagagtg 34064249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 31295654 - 31295572
Alignment:
Q  143 gagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||| | ||||||| ||||| |  ||||| ||| ||||| |||  ||||||||||| ||||||| |||||||||||||||    
T  31295654 gagtcttcgaggtggaacgaaagttgcctgcaggcatgttagcacttcgacgctcaagtcagtaatgaaactgagaaagagtg 31295572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 14080489 - 14080537
Alignment:
Q  176 gcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||||||||    
T  14080489 gcacattagcactctgacgctcaagttagtaat-gaactgagaaagagtg 14080537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 6197 - 6352
Alignment:
Q  70 gagaacggatgagtggcatcggtggtgaataatgtttcagtgtgacggtaatgatttttggaacggtggcattgagtctttgcggtggaaggaaaggtat 169  Q
    |||||||||||||||||| |||||  | |||||| |   |||||||||||| || ||| || ||||   | |||||||| ||| ||||||  |||||| |    
T  6197 gagaacggatgagtggcaacggtgacggataatgctctggtgtgacggtaacgactttcggtacggcaacgttgagtctctgcagtggaacaaaaggtgt 6296  T
Q  170 ctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
     |||| ||||||||| |||  || |||||||| |||||||||||||||||| ||||    
T  6297 ttgcaggcacgttagcacttcgaagctcaagtcagtaatggaactgagaaatagtg 6352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 10838 - 10756
Alignment:
Q  142 tgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagt 224  Q
    |||||||| | ||||||| ||||||| |||| | ||| ||||| |||| |||| |||||| ||||||||||||||||||||||    
T  10838 tgagtcttcgtggtggaatgaaaggtgtctgtaggcatgttagcactccgacgttcaagtcagtaatggaactgagaaagagt 10756  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 68885 - 68838
Alignment:
Q  177 cacgttagtactcagacgctcaagttagtaatggaactgagaaagagt 224  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||    
T  68885 cacgttagcactccaacgctcaagttagtaatggaactgagaaagagt 68838  T

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Target: scaffold0294 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 326 - 280
Alignment:
Q  179 cgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||||    
T  326 cgttagcactccgacgctcaagtcagtaatggaactgagaaagagtg 280  T

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Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 8706 - 8614
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||| ||| |||||||||||||||||||  |||||| | |||| ||||||||| |||  ||||||||||| ||||||| |||||| ||| ||||    
T  8706 acggcggcgttgagtctttgcggtggaataaaaggtgtttgca-gcacgttagcacttcgacgctcaagtcagtaatgaaactgaaaaacagtg 8614  T

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Target: scaffold0291; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 15515 - 15468
Alignment:
Q  177 cacgttagtactcagacgctcaagttagtaatggaactgagaaagagt 224  Q
    |||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  15515 cacgttagcactccgacgctccagtcagtaatggaactgagaaagagt 15468  T

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Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 95880 - 95847
Alignment:
Q  192 acgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||||||||||||||||||||||||||||    
T  95880 acgctcaagttagtaatggaactgagaaagagtg 95847  T

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Target: scaffold0205 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 22891 - 22935
Alignment:
Q  176 gcacgttagtactcagacgctcaagttagtaatggaactgagaaa 220  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||    
T  22891 gcacgttagcactctgacgctcaagtcagtaatggaactgagaaa 22935  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 4533 - 4470
Alignment:
Q  153 ggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactga 216  Q
    ||||||| ||||||| |||||||||||||||| ||||  |||||||||| | ||||| ||||||    
T  4533 ggtggaacgaaaggtgtctgcaagcacgttagcactccaacgctcaagtcactaatgaaactga 4470  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 35253 - 35307
Alignment:
Q  171 tgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    |||| ||||||||| |||| ||| ||||||| ||||| |||||||||||||||||    
T  35253 tgcaggcacgttagcactctgacactcaagtcagtaacggaactgagaaagagtg 35307  T

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Target: scaffold0505 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 7846 - 7939
Alignment:
Q  132 acggtggcattgagtctttgcggtggaaggaaaggtatctgcaagcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||  ||||||||  ||||||||||||||||   || | ||||||||| ||||  |||||||| | ||||||| || ||||||||||||    
T  7846 acggtggcgatgagtcttcacggtggaaggaaaggtgcatgtaggcacgttagcactctaacgctcaaatcagtaatgcaattgagaaagagtg 7939  T

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Target: scaffold0360 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 13927 - 13976
Alignment:
Q  176 gcacgttagtactcagacgctcaagttagtaatggaactgagaaagagtg 225  Q
    ||||||||||||||  | |||||||| ||||||| |||||||||||||||    
T  13927 gcacgttagtactccaaagctcaagtcagtaatgaaactgagaaagagtg 13976  T

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