View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9961_low_53 (Length: 233)
Name: NF9961_low_53
Description: NF9961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9961_low_53 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 34287325 - 34287533
Alignment:
| Q |
18 |
caagtaaaatcattgattcaattaaatgccaacaggaagcaaacagagattatttgttcttctttaaaattttattcatgaatgatttttcttttggcta |
117 |
Q |
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| T |
34287325 |
caagtaaaatcattgattcaattaaatgccaacaggaagcaaacagagattatttgttcttctttaaaattttattcatgaatgatttttcttttggcta |
34287424 |
T |
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| Q |
118 |
atgagtaaatttgttatatattatatgtcaaaacaaacttttgcagggattcttttattatttaaacatatactatagtcagaaacatttcagcaaaatt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
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| T |
34287425 |
atgagtaaatttgttatatattatatgtcaaaacaaacttttgcagggattcttttattatttaaacatatactatagtcagaaatatttcggcaaaatt |
34287524 |
T |
|
| Q |
218 |
acactttta |
226 |
Q |
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| T |
34287525 |
acactttta |
34287533 |
T |
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